Rh1BG109700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
18884406 .. 18886496
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG109700.1

Sequence Viewer

Length: 2091 bp
ATGCCTCCCCAATTAAGTCGGTTGACTCATCTGCGAACTTTGCCTAATTTTGTGGTGGGGAAAGGTAGTGCATCAGGCATTGGAGAGTTAGGGTCATTGCATCTTCTTGGGACCTTGAGGCTTGAAAGATTGGAGAATGTGATTGATGTTGAGGATGCAAAGAGGGCCCAAATAATGAACAAGGAAGCATTGGAAACCTTGCGATTGGAATGGAGTGGCACAAGTGAGAAGGAGTCGGAGGTGCTCTGTAGTTTAAAACCTCAGAAAAAGCTTCTAGAGCTCACCATCAAGGGTTACAATGGTTTAGAATTCTCAAAATGGATTGGACATCCTTCATTCTCTAATATGACGTATGTGAAGTTACAGAACTGTAAAAATTGTCGATTCTTACCTCCCCTTGGTCAATTACCTTTACTAAAAGTCCTTTGGATAAAAGGACTGGCCAATGTTGAAAGTGTGGGTGCTGAGTTTTATGGAGATTGTAGCTTGCCTTTTCCAATGTTGGAAGAGCTGAGGTTCGAGGATATGCAAAATTGGAAGGAGTGGCTTCCTTGCAAAAGAAATGAAGAAATTCGAATTTTCCCATGCATGGGAAAACTTTTCATCCGTAGTTGCCCCAGTCTGAAAGGTTGGTTGCCCAAGAACATGGATTCATTATCAAAGCTGCGTATTGTTGAATGTGAAGAGTTAGTGGTTTCAATTGCTAATTATAAACATCTTCGTGAGCTGCGCATCGACGGTTGCAAAAGGGTGGTGCACAGAAGGGGAGTTAAGTTTAAGTTACTGGAGGATATGCGGCTTCATAGTACTTCAGAGTTCAGACTCAAAATAGATGGGTTCATCAGAGGATTGACAAAGCTTCAAAGATTGCGGATTACTGGTTGTGAAGAGTTGACATGTTTATGGGAGAATGAGTATAGATGGTTGCAGCCTCGGATTTCTAATATTATTGGAGGCAACATTTCTGATTCCCCTCCTCACTTTATTCAAGAGCTAAGAGCGCTCAAGCAACTTGTGTTAATTGGATGCTCAAATCTAATTTCTTTTCCAGAAGCTGGTTGGCCACCTTGTCTAGAATCTGTGAAAATGGAGTCGTGTAATTCTTTAAGGCATTTTGTAAGGAATCAGATACCGCCAAGCATAAGAAGAATAGAGATAGCAAAATGTCAAAATTTGAAACGATTAGTCAAGGATGCTGGGGAGCTAGAGGGTTGTCTGGAGAAGTTGGAAATAACAGGGTGTGCATCTTTGACATCCTTATCAGGGGAAGGAGGCCGACTACCCAGAACGCTCAAGAACATTTTGATAAGTGAATGTGAACAATTGGAGTCCATAATCAAAACATTCCACGATGACACTTGTCTTGACGTTATTCAGATATGCGAATGTGCAAATCTCAAATCCTTTCCAGAGGGGCTGTGCCATCTCTCCATTCTTCGCAAGTTAATTATAAGTGAATGTGGAAGTCTCGTTTCTTTCCCGAGAGGAGGGTTGCCATCCAACCTGACATACTTGTATATCTACAACTGTGATCAGTTGGAAGCCCTCCCCAGAGGCATGGCCAACCTCAGCTGTCTTCAGACTTTTAAAGTGCAATGCTGTGGAGGTAATTTGGCATCCATTCTAGAAGAGGGTTTCCCACCCAACCTAATTCAACTTGTTATTATGAAACCCAAAAGTTGTAAGCCTCTCTCAGAGTGGGGGCTTCACCAATTGGACAGACTCACCTCTCTTAAAGAATTGTGGATCTGTGGTGTAGATCCAGATCTGGTGTCCTTTCCACCAAAGGAGGTGCTTCTCCCTAAATCTCTCATTAAACTCAGGATTGGAGACTTCCCAAATCTGAAGCGCCTATCATCACTCACTTCTCTTGAATCCCTTGCCATTTGGAATTGTCCGAAGCTAGCATCTATTATTGGAGAACAAGAGGATCATCTGCCTCTTTCACTTACACAGCTTCGCATCTTTAAGGGTTGTCCGCTGCTCACAAAGAAATACAAACCAGGTAAAGGACGACATTGGTCCAAAATAGCCCACATCCCTTACGTTTATGTTGGAGACTTCTTTGAGGAAGCCGAAGCTGACCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

696

Amino Acids

78.94

Weight (kDa)

8.64

Isoelectric Point (pI)

46.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 176 1.2e-08 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 27 - 146 6.4e-32 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 711, 1451
Acc16I TGCGCA 1 cut(s) 731
AccB7I CCANNNNNTGG 1 cut(s) 1055
AciI CCGC 5 cut(s) 796, 871, 1133, 1979, 2086
AclWI GGATC 3 cut(s) 1754, 1754, 1938
AcoI YGGCCR 3 cut(s) 441, 1061, 1560
AcsI RAATTY 4 cut(s) 308, 570, 576, 1171
AcuI CTGAAG 3 cut(s) 795, 1562, 1865
AfaI GTAC 1 cut(s) 808
AfeI AGCGCT 1 cut(s) 1002
AfiI CCNNNNNNNGG 7 cut(s) 398, 589, 590, 1055, 1263, 1487, 2009
AflIII ACRYGT 1 cut(s) 896
AgsI TTSAA 9 cut(s) 125, 452, 677, 699, 863, 989, 1177, 1655, 1874
AjnI CCWGG 1 cut(s) 2002
Alw21I GWGCWC 3 cut(s) 246, 282, 759
Alw26I GTCTC 3 cut(s) 1472, 1824, 2052
Alw44I GTGCAC 1 cut(s) 755
AlwI GGATC 3 cut(s) 1754, 1754, 1938
AlwNI CAGNNNCTG 1 cut(s) 1055
Ama87I CYCGRG 1 cut(s) 1480
Aor51HI AGCGCT 1 cut(s) 1002
AoxI GGCC 5 cut(s) 165, 441, 1061, 1273, 1560
ApaI GGGCCC 1 cut(s) 169
ApaLI GTGCAC 1 cut(s) 755
ApeKI GCWGC 4 cut(s) 664, 727, 928, 1981
ApoI RAATTY 4 cut(s) 308, 570, 576, 1171
Asp700I GAANNNNTTC 1 cut(s) 570
AspLEI GCGC 3 cut(s) 732, 1003, 1851
AspS9I GGNCC 4 cut(s) 111, 165, 166, 2022
AsuHPI GGTGA 3 cut(s) 274, 1700, 1717
AsuII TTCGAA 1 cut(s) 574
AsuNHI GCTAGC 1 cut(s) 1903
AvaI CYCGRG 1 cut(s) 1480
AvaII GGWCC 2 cut(s) 111, 2022
BaeGI GKGCMC 2 cut(s) 169, 759
BalI TGGCCA 3 cut(s) 443, 1063, 1562
BanII GRGCYC 2 cut(s) 169, 282
BbsI GAAGAC 1 cut(s) 1568
Bbv12I GWGCWC 3 cut(s) 246, 282, 759
BbvCI CCTCAGC 2 cut(s) 512, 1568
BbvI GCAGC 4 cut(s) 651, 714, 940, 1968
BccI CCATC 5 cut(s) 293, 827, 915, 1431, 1504
BciT130I CCWGG 1 cut(s) 2004
BclI TGATCA 1 cut(s) 1531
BcoDI GTCTC 3 cut(s) 1472, 1824, 2052
BfaI CTAG 5 cut(s) 275, 1073, 1205, 1625, 1904
BfmI CTRYAG 1 cut(s) 247
BfoI RGCGCY 2 cut(s) 1004, 1852
BglII AGATCT 1 cut(s) 1765
BisI GCNGC 5 cut(s) 665, 728, 797, 929, 1982
BlsI GCNGC 5 cut(s) 666, 729, 798, 930, 1983
BmcAI AGTACT 1 cut(s) 808
Bme1390I CCNGG 1 cut(s) 2004
Bme18I GGWCC 2 cut(s) 111, 2022
BmeT110I CYCGRG 1 cut(s) 1480
BmgT120I GGNCC 4 cut(s) 111, 165, 166, 2022
BmiI GGNNCC 2 cut(s) 112, 167
BmrFI CCNGG 1 cut(s) 2004
BmrI ACTGGG 1 cut(s) 612
BmtI GCTAGC 1 cut(s) 1907
BmuI ACTGGG 1 cut(s) 612
BoxI GACNNNNGTC 2 cut(s) 1359, 2020
BpiI GAAGAC 1 cut(s) 1568
BpmI CTGGAG 2 cut(s) 806, 1238
Bpu10I CCTNAGC 2 cut(s) 512, 1568
Bpu14I TTCGAA 1 cut(s) 574
BpuEI CTTGAG 3 cut(s) 136, 989, 1277
BsaBI GATNNNNATC 1 cut(s) 1764
BsaJI CCNNGG 2 cut(s) 397, 932
BsaXI ACNNNNNCTCC 2 cut(s) 899, 929
Bsc4I CCNNNNNNNGG 7 cut(s) 398, 589, 590, 1055, 1263, 1487, 2009
Bse1I ACTGG 4 cut(s) 444, 618, 789, 883
Bse3DI GCAATG 2 cut(s) 95, 1601
Bse8I GATNNNNATC 1 cut(s) 1764
BseBI CCWGG 1 cut(s) 2004
BseDI CCNNGG 2 cut(s) 397, 932
BseGI GGATG 9 cut(s) 160, 328, 603, 1031, 1198, 1253, 1496, 1616, 2037
BseJI GATNNNNATC 1 cut(s) 1764
BseLI CCNNNNNNNGG 7 cut(s) 398, 589, 590, 1055, 1263, 1487, 2009
BseMI GCAATG 2 cut(s) 95, 1601
BseMII CTCAG 6 cut(s) 275, 456, 503, 1582, 1707, 1834
BseNI ACTGG 4 cut(s) 444, 618, 789, 883
BseRI GAGGAG 2 cut(s) 966, 1500
BseSI GKGCMC 2 cut(s) 169, 759
BseXI GCAGC 4 cut(s) 651, 714, 940, 1968
BseYI CCCAGC 1 cut(s) 1196
BshFI GGCC 5 cut(s) 167, 443, 1063, 1275, 1562
BsiHKAI GWGCWC 3 cut(s) 246, 282, 759
BsiHKCI CYCGRG 1 cut(s) 1480
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 7 cut(s) 398, 589, 590, 1055, 1263, 1487, 2009
BsmAI GTCTC 3 cut(s) 1472, 1824, 2052
BsmFI GGGAC 1 cut(s) 124
BsnI GGCC 5 cut(s) 167, 443, 1063, 1275, 1562
BsoBI CYCGRG 1 cut(s) 1480
Bsp119I TTCGAA 1 cut(s) 574
Bsp120I GGGCCC 1 cut(s) 165
Bsp1286I GDGCHC 4 cut(s) 169, 246, 282, 759
Bsp143I GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
BspACI CCGC 5 cut(s) 796, 871, 1133, 1979, 2086
BspANI GGCC 5 cut(s) 167, 443, 1063, 1275, 1562
BspCNI CTCAG 6 cut(s) 274, 457, 504, 1581, 1706, 1833
BspLI GGNNCC 2 cut(s) 112, 167
BspOI GCTAGC 1 cut(s) 1907
BspPI GGATC 3 cut(s) 1754, 1754, 1938
BspQI GCTCTTC 1 cut(s) 501
BspT104I TTCGAA 1 cut(s) 574
BsrDI GCAATG 2 cut(s) 95, 1601
BsrI ACTGG 4 cut(s) 444, 618, 789, 883
BssECI CCNNGG 2 cut(s) 397, 932
BssMI GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
BssT1I CCWWGG 1 cut(s) 397
Bst2UI CCWGG 1 cut(s) 2004
Bst4CI ACNGT 3 cut(s) 371, 740, 1529
Bst6I CTCTTC 4 cut(s) 501, 678, 882, 1623
BstBI TTCGAA 1 cut(s) 574
BstC8I GCNNGC 2 cut(s) 488, 1905
BstDEI CTNAG 7 cut(s) 261, 465, 512, 995, 1568, 1693, 1820
BstF5I GGATG 9 cut(s) 160, 328, 603, 1031, 1198, 1253, 1496, 1616, 2037
BstH2I RGCGCY 2 cut(s) 1004, 1852
BstHHI GCGC 3 cut(s) 732, 1003, 1851
BstKTI GATC 5 cut(s) 1534, 1749, 1762, 1768, 1933
BstMAI GTCTC 3 cut(s) 1472, 1824, 2052
BstMBI GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
BstMWI GCNNNNNNNGC 4 cut(s) 40, 164, 277, 1000
BstNI CCWGG 1 cut(s) 2004
BstNSI RCATGY 1 cut(s) 900
BstPAI GACNNNNGTC 2 cut(s) 1359, 2020
BstSCI CCNGG 1 cut(s) 2002
BstSFI CTRYAG 1 cut(s) 247
BstSLI GKGCMC 2 cut(s) 169, 759
BstV1I GCAGC 4 cut(s) 651, 714, 940, 1968
BstV2I GAAGAC 1 cut(s) 1568
BstX2I RGATCY 3 cut(s) 1746, 1759, 1765
BstXI CCANNNNNNTGG 2 cut(s) 646, 1558
BstYI RGATCY 3 cut(s) 1746, 1759, 1765
BsuRI GGCC 5 cut(s) 167, 443, 1063, 1275, 1562
BtsCI GGATG 9 cut(s) 160, 328, 603, 1031, 1198, 1253, 1496, 1616, 2037
Cac8I GCNNGC 2 cut(s) 488, 1905
CaiI CAGNNNCTG 1 cut(s) 1055
CfoI GCGC 3 cut(s) 732, 1003, 1851
Cfr13I GGNCC 4 cut(s) 111, 165, 166, 2022
CsiI ACCWGGT 1 cut(s) 2002
Csp6I GTAC 1 cut(s) 807
CviAII CATG 5 cut(s) 585, 589, 646, 897, 1558
CviQI GTAC 1 cut(s) 807
DdeI CTNAG 7 cut(s) 261, 465, 512, 995, 1568, 1693, 1820
DpnI GATC 5 cut(s) 1533, 1748, 1761, 1767, 1932
DpnII GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
DraI TTTAAA 2 cut(s) 255, 1588
EaeI YGGCCR 3 cut(s) 441, 1061, 1560
Eam1104I CTCTTC 4 cut(s) 501, 678, 882, 1623
EarI CTCTTC 4 cut(s) 501, 678, 882, 1623
Ecl136II GAGCTC 1 cut(s) 280
Eco130I CCWWGG 1 cut(s) 397
Eco24I GRGCYC 2 cut(s) 169, 282
Eco47I GGWCC 2 cut(s) 111, 2022
Eco47III AGCGCT 1 cut(s) 1002
Eco53kI GAGCTC 1 cut(s) 280
Eco57I CTGAAG 3 cut(s) 795, 1562, 1865
Eco88I CYCGRG 1 cut(s) 1480
EcoICRI GAGCTC 1 cut(s) 280
EcoO109I RGGNCCY 2 cut(s) 111, 165
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 2002
EcoT14I CCWWGG 1 cut(s) 397
EcoT22I ATGCAT 1 cut(s) 590
EcoT38I GRGCYC 2 cut(s) 169, 282
ErhI CCWWGG 1 cut(s) 397
FaeI CATG 5 cut(s) 588, 592, 649, 900, 1561
FaqI GGGAC 1 cut(s) 124
FatI CATG 5 cut(s) 584, 588, 645, 896, 1557
FbaI TGATCA 1 cut(s) 1531
Fnu4HI GCNGC 5 cut(s) 665, 728, 797, 929, 1982
FokI GGATG 9 cut(s) 167, 315, 590, 1038, 1205, 1240, 1483, 1603, 2024
FriOI GRGCYC 2 cut(s) 169, 282
Fsp4HI GCNGC 5 cut(s) 665, 728, 797, 929, 1982
FspBI CTAG 5 cut(s) 275, 1073, 1205, 1625, 1904
FspI TGCGCA 1 cut(s) 731
GlaI GCGC 3 cut(s) 731, 1002, 1850
GluI GCNGC 5 cut(s) 665, 728, 797, 929, 1982
GsaI CCCAGC 1 cut(s) 1200
GsuI CTGGAG 2 cut(s) 806, 1238
HaeII RGCGCY 2 cut(s) 1004, 1852
HaeIII GGCC 5 cut(s) 167, 443, 1063, 1275, 1562
HhaI GCGC 3 cut(s) 732, 1003, 1851
Hin1II CATG 5 cut(s) 588, 592, 649, 900, 1561
Hin6I GCGC 3 cut(s) 730, 1001, 1849
HinP1I GCGC 3 cut(s) 730, 1001, 1849
HincII GTYRAC 2 cut(s) 24, 894
HindII GTYRAC 2 cut(s) 24, 894
HindIII AAGCTT 2 cut(s) 269, 857
HphI GGTGA 3 cut(s) 274, 1700, 1717
Hpy166II GTNNAC 4 cut(s) 24, 757, 894, 1319
Hpy8I GTNNAC 4 cut(s) 24, 757, 894, 1319
Hpy99I CGWCG 1 cut(s) 740
HpyAV CCTTC 5 cut(s) 223, 342, 532, 756, 1262
HpyCH4III ACNGT 3 cut(s) 371, 740, 1529
HpyCH4IV ACGT 3 cut(s) 350, 1368, 2046
HpyF10VI GCNNNNNNNGC 4 cut(s) 40, 164, 277, 1000
HpyF3I CTNAG 7 cut(s) 261, 465, 512, 995, 1568, 1693, 1820
HpySE526I ACGT 3 cut(s) 350, 1368, 2046
Hsp92II CATG 5 cut(s) 588, 592, 649, 900, 1561
HspAI GCGC 3 cut(s) 730, 1001, 1849
Ksp22I TGATCA 1 cut(s) 1531
Kzo9I GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
LguI GCTCTTC 1 cut(s) 501
LmnI GCTCC 1 cut(s) 1201
Lsp1109I GCAGC 4 cut(s) 651, 714, 940, 1968
MabI ACCWGGT 1 cut(s) 2002
MaeI CTAG 5 cut(s) 275, 1073, 1205, 1625, 1904
MaeII ACGT 3 cut(s) 350, 1368, 2046
MaeIII GTNAC 3 cut(s) 293, 360, 780
MalI GATC 5 cut(s) 1533, 1748, 1761, 1767, 1932
MboI GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
MfeI CAATTG 3 cut(s) 699, 1322, 1712
MflI RGATCY 3 cut(s) 1746, 1759, 1765
MhlI GDGCHC 4 cut(s) 169, 246, 282, 759
MlsI TGGCCA 3 cut(s) 443, 1063, 1562
MluNI TGGCCA 3 cut(s) 443, 1063, 1562
MlyI GAGTC 6 cut(s) 19, 242, 816, 1100, 1337, 1716
MmeI TCCRAC 6 cut(s) 216, 483, 1206, 1518, 1524, 2035
Mox20I TGGCCA 3 cut(s) 443, 1063, 1562
Mph1103I ATGCAT 1 cut(s) 590
MroXI GAANNNNTTC 1 cut(s) 570
MscI TGGCCA 3 cut(s) 443, 1063, 1562
MslI CAYNNNNRTG 2 cut(s) 720, 901
Msp20I TGGCCA 3 cut(s) 443, 1063, 1562
MspA1I CMGCKG 3 cut(s) 1572, 1981, 2088
MspR9I CCNGG 1 cut(s) 2004
MunI CAATTG 3 cut(s) 699, 1322, 1712
MvaI CCWGG 1 cut(s) 2004
MwoI GCNNNNNNNGC 4 cut(s) 40, 164, 277, 1000
NdeII GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
NheI GCTAGC 1 cut(s) 1903
NlaIII CATG 5 cut(s) 588, 592, 649, 900, 1561
NlaIV GGNNCC 2 cut(s) 112, 167
NsbI TGCGCA 1 cut(s) 731
NsiI ATGCAT 1 cut(s) 590
NspI RCATGY 1 cut(s) 900
NspV TTCGAA 1 cut(s) 574
PciI ACATGT 1 cut(s) 896
PciSI GCTCTTC 1 cut(s) 501
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 6 cut(s) 384, 650, 968, 1076, 1123, 1874
PflMI CCANNNNNTGG 1 cut(s) 1055
PkrI GCNGC 5 cut(s) 666, 729, 798, 930, 1983
PleI GAGTC 6 cut(s) 19, 241, 816, 1099, 1336, 1716
PpsI GAGTC 6 cut(s) 19, 241, 816, 1099, 1336, 1716
PpuMI RGGWCCY 1 cut(s) 111
PscI ACATGT 1 cut(s) 896
PshAI GACNNNNGTC 2 cut(s) 1359, 2020
PsiI TTATAA 2 cut(s) 711, 1451
Psp124BI GAGCTC 1 cut(s) 282
Psp5II RGGWCCY 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 2002
PspFI CCCAGC 1 cut(s) 1196
PspGI CCWGG 1 cut(s) 2002
PspN4I GGNNCC 2 cut(s) 112, 167
PspOMI GGGCCC 1 cut(s) 165
PspPI GGNCC 4 cut(s) 111, 165, 166, 2022
PspPPI RGGWCCY 1 cut(s) 111
PstNI CAGNNNCTG 1 cut(s) 1055
PsuI RGATCY 3 cut(s) 1746, 1759, 1765
PvuII CAGCTG 1 cut(s) 1572
RsaI GTAC 1 cut(s) 808
RsaNI GTAC 1 cut(s) 807
RseI CAYNNNNRTG 2 cut(s) 720, 901
SacI GAGCTC 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 501
SatI GCNGC 5 cut(s) 665, 728, 797, 929, 1982
Sau3AI GATC 5 cut(s) 1531, 1746, 1759, 1765, 1930
Sau96I GGNCC 4 cut(s) 111, 165, 166, 2022
ScaI AGTACT 1 cut(s) 808
SchI GAGTC 6 cut(s) 19, 242, 816, 1100, 1337, 1716
ScrFI CCNGG 1 cut(s) 2004
SduI GDGCHC 4 cut(s) 169, 246, 282, 759
SexAI ACCWGGT 1 cut(s) 2002
SfcI CTRYAG 1 cut(s) 247
SfuI TTCGAA 1 cut(s) 574
SinI GGWCC 2 cut(s) 111, 2022
SmiMI CAYNNNNRTG 2 cut(s) 720, 901
SmlI CTYRAG 3 cut(s) 115, 1004, 1292
SmoI CTYRAG 3 cut(s) 115, 1004, 1292
SsiI CCGC 5 cut(s) 796, 871, 1133, 1979, 2086
SspI AATATT 1 cut(s) 946
SspMI CTAG 5 cut(s) 275, 1073, 1205, 1625, 1904
SstI GAGCTC 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 2002
StyI CCWWGG 1 cut(s) 397
TaaI ACNGT 3 cut(s) 371, 740, 1529
TaiI ACGT 3 cut(s) 353, 1371, 2049
TaqI TCGA 4 cut(s) 382, 519, 574, 735
TatI WGTACW 1 cut(s) 806
TauI GCSGC 1 cut(s) 799
TfiI GAWTC 6 cut(s) 384, 650, 968, 1076, 1123, 1874
TseI GCWGC 4 cut(s) 664, 727, 928, 1981
TspDTI ATGAA 8 cut(s) 191, 324, 579, 592, 642, 791, 829, 1682
TspGWI ACGGA 1 cut(s) 596
Van91I CCANNNNNTGG 1 cut(s) 1055
VneI GTGCAC 1 cut(s) 755
VpaK11BI GGWCC 2 cut(s) 111, 2022
XapI RAATTY 4 cut(s) 308, 570, 576, 1171
XbaI TCTAGA 3 cut(s) 274, 1072, 1624
XceI RCATGY 1 cut(s) 900
XcmI CCANNNNNNNNNTGG 1 cut(s) 1056
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 5 cut(s) 275, 1073, 1205, 1625, 1904
ZrmI AGTACT 1 cut(s) 808
Zsp2I ATGCAT 1 cut(s) 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.