RchiOBHm_Chr1g0317951

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
5489964 .. 5493644
3681 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54824

Sequence Viewer

Length: 2985 bp
ATGTTAGATGACCGGTTATGGAGTCTCTTTACTCAGAAGGAAAGTCATATTCTTCTAGTGTTAAAGATGAGCTATTACTATCTTCCATCAAGGTTGAAGAGGTGCTTTGCCTATTGCTCAGTACTTCCACATGACTATGAATTTGGTGAGGCACAATTGATCCTTTTGTGGATGGCAGAGGATTTGATTCAGCCACAACCAAAAGAAAACAAACAAATGGAAGATTTAGGCAGGGACATTTTTCAAGAGCTATTGTCGAGGTCTCTATTTCAAAAATCAAGCAGAGACAAATCAAAATATGTAATGCATGACCTGGTTACTGATATGGCACGATGGGCAGCTGGAGAAATTTGTTTAAAGTTGGATGATAAGTCAGAAGAGAATTGCATGTTGAGATGTTCTCCAAAAGCACGCCATTCGTCTTACATTTGTGGGGAGTATGATGGGGTTGAAAAATTTGAGGCAATTTCTGAACTAATACAATTGCGGACATTCTTGCCACTTTCACTATCAGATGCCTCCCGTTGGAACTATCTTACTCGGACAGTCACTTTTGAATTATTGCCAAAACTGCGTTTCTTACGGGTGCTCTCTTTGAACGGCTACAAAATAACCGAGTTGCCTGATTCCATTGGTAAACTGAAGCACCTACGGTATCTTGATCTTTCTTACACACTAATAGCATATTTGCCAGAATCGACCAGCACTTTGTGCAACTTACAGACATTGATACTGGAAAGTTGTTATGAGTTGAAGGCATTACCTACAAACATGAGGAATCTAATAAATTTGCGTCATCTTAACAATTCAGGTGTATGTAATCTGAAAGAAATGCCTTCTCAGCTAGGTCAATTGACTAATCTGCGAACATTGCGTAATTTTGCTGTTGGCAAAGGTAGTGGCGCAAGGGTAAGAGAGATTGGGTCGTTGTTGCATCTACAAGGGACGTTGCGCCTCTCAAGACTGGAGAATGTGATTGGTGGGGATGCTAGGGATGCCAACTTGAAGAGCAAGGAGAGGCTTGAAGCCTTATTACTAGAATGGTCTAGTTCTAGTGTCTCCACAGAAATTACAACAGTTGTGCTCGACATGTTACAACCTCATCGGAAGCTCAAAGCGCTGACCATCAGTGGTTATGCTGGATTGAAATTTCCAACCTGGATTGGAGATCATTCATTCTCTAATATGGTTCGTGTAAGTTTAACAGGCTGTAATCATTGTCAGTTCTTGCCACCATTTGGACAATTGTCATCTCTCAAAGAACTTCATATACAAAGAATGGATGCTGTGGAAAGTGTTGGTCCTGAATTTTATGGAGAAGGTAACTTGCCTTTTCAAGCTTTAGAGACTCTTAAGTTTCAGAGTTTAAAAAATTGGAAGGAGTGGTCTCCTTGCCAGCAAGATCTGGAAATTGGATTTTTCTGTTGCCTCAAAATGCTTTCCATTGAGGATTGCCCCAAATTGGAGGGTAGATTACCCGAGAAGCTTGATTCATTAGCAAAGCTTGACATATCTGGATGTGAGGAATTGGTGGTTTTCCTAGCCAATTATAAACAACTTCATGAATCAGACATTCAAAATTGCAAGCTGGTGGTGCACACAAGTCTGGATCACTTTGACTTACTAGAGTCCTTGTGGTTGTCAAATATTTCAGAGTTCAGATTCCAAAGGCAGGAAGTCATGAAAAGGTTCAAAAAGGTTAAAGAGTTGAAGATTACTGGTTGTGAGGAGCTGGCACCGCTGTCTTTTCAGAATGACGATAGAATACTACAATGCTTGATTTCTCTTCGTCATTTGTATATCCAAGACAACTCTTCCCTTGTTGAGAAGCTAGGTAAAGAAGCAGGGCAGCTGCAAGTATTGGATTGCAAGCTTGAATATCTGACTTTGAGCAACTGTGGAAGTCTTCTGAAGGTACCAGAAGGATTCCATCACCTGATGTCTCTTCAAGAACTTTACGTATATGACTGTTCAAGTCTAGTTTGTTTTCCAGATCTTGGTCTACCACCTTCTCTTAAAGTTATAGAGATTCGAAGGTGCAAATCTTTGATGTATTTAGCTAGAGGATACCAGGTTCTCGCAAGTCTAAGAAGAATAGAGATCAGTGATTGCTCAAATTTGAAATCATTAATAGAGAAAGAAGAGGAGGTGTTGGTAGATGGCTCTTCTTCTTCTTCTTGTCTCGAGTCGTTGGAGATAATGGAGTGCAGATCTCTGACGTGCTTATCATTCCAAGGCCAATTATCCACGACTCTTAAACACCTAAAGATAGTCAACTGTACACAGCTGGAGTTAATAACTGATGGGGTCTTCCATAACACTAGTCCACTTGAGAAAATTCACATCCAGGAGTGTCCAAATCTTACATCCTTACCGGAAGGCCTGTGCTACCTCACCAGTCTTGAATCAATTTTAATCAGGGGTTGCGAGAAACTGGAGGTGGTACCTATCCTGAGAGACGTGCAGAATAATCTCGACTCTGTTGAATATTTGTGGATTGATTACTGTGAAGGTTTGTCTTCCTTTCCCCTGAACCTAACATCACTTACTATTTTGAATATCAAGAGTTGTAAGGCGCTTTTGAAATCTCAAGGGTTGCACAGACTCACCTGTCTTAGACATTTGTGGATCACGGGTAAAGATGATCCAAATTTGGTGTCATTTCCCCCTACTGAGAATGAGAAGGAGAATGAGAATGAGATGTTGCTCCCAAAATCTCTTCTTAAACTCTACATCAGTGGCTTCCCAAATCTCAAGAAACTGAGCAAGGGCTTTCAATTCCTCACGTCTCTTCAAATTCTTGATATCTTCGACTGTCCAAAGCTAGCATTCATTCCAGATGAAGGTCTGCCTCGTTCACTTGGGAAACTTGTCATCTCTTACTGTCCTATACTAGAAAAGAAGTGCAAAGAAGGCAGTGAAGGACGATACTGGCCCAAGATAGCCCACATCCCTTGCATACTTATTGCTCCTGATCTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

994

Amino Acids

113.33

Weight (kDa)

6.27

Isoelectric Point (pI)

49.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 42 - 110 4.4e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 187 - 454 4.4e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 305 - 427 2.8e-34 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1551
AasI GACNNNNNNGTC 1 cut(s) 2610
Acc65I GGTACC 2 cut(s) 1915, 2443
AccB1I GGYRCC 3 cut(s) 1735, 1915, 2443
AccB7I CCANNNNNTGG 2 cut(s) 1238, 1997
AccI GTMKAC 1 cut(s) 2002
AciI CCGC 2 cut(s) 487, 1739
AclWI GGATC 4 cut(s) 154, 1617, 2636, 2639
AcuI CTGAAG 2 cut(s) 662, 1931
AdeI CACNNNGTG 1 cut(s) 711
AfaI GTAC 4 cut(s) 123, 1917, 2281, 2445
AfeI AGCGCT 1 cut(s) 1119
AfiI CCNNNNNNNGG 6 cut(s) 525, 1238, 1462, 1672, 1997, 2843
AflII CTTAAG 1 cut(s) 1352
AflIII ACRYGT 1 cut(s) 1089
AgeI ACCGGT 1 cut(s) 12
AhlI ACTAGT 1 cut(s) 2321
AjiI CACGTC 3 cut(s) 2220, 2461, 2787
AjnI CCWGG 4 cut(s) 312, 1157, 2070, 2346
AloI GAACNNNNNNTCC 2 cut(s) 2058, 2090
Alw21I GWGCWC 3 cut(s) 591, 1086, 1599
Alw44I GTGCAC 1 cut(s) 1595
AlwI GGATC 4 cut(s) 154, 1617, 2636, 2639
Ama87I CYCGRG 2 cut(s) 1478, 2183
Aor51HI AGCGCT 1 cut(s) 1119
AoxI GGCC 3 cut(s) 2236, 2380, 2933
ApaLI GTGCAC 1 cut(s) 1595
ApeKI GCWGC 3 cut(s) 338, 1849, 1852
ArsI GACNNNNNNTTYG 6 cut(s) 125, 157, 691, 723, 2642, 2674
AseI ATTAAT 1 cut(s) 2129
AsiGI ACCGGT 1 cut(s) 12
Asp700I GAANNNNTTC 1 cut(s) 1688
Asp718I GGTACC 2 cut(s) 1915, 2443
AspLEI GCGC 4 cut(s) 905, 954, 1120, 2578
AspS9I GGNCC 2 cut(s) 1301, 2934
AsuHPI GGTGA 4 cut(s) 158, 1925, 2386, 2599
AsuII TTCGAA 1 cut(s) 2032
AsuNHI GCTAGC 1 cut(s) 2824
AvaI CYCGRG 2 cut(s) 1478, 2183
AvaII GGWCC 1 cut(s) 1301
BaeGI GKGCMC 1 cut(s) 1599
BanI GGYRCC 3 cut(s) 1735, 1915, 2443
BarI GAAGNNNNNNTAC 2 cut(s) 1017, 1049
BbsI GAAGAC 3 cut(s) 1898, 2302, 2511
Bbv12I GWGCWC 3 cut(s) 591, 1086, 1599
BbvI GCAGC 3 cut(s) 350, 1839, 1861
BccI CCATC 8 cut(s) 94, 166, 327, 437, 1133, 1938, 2153, 2297
BceAI ACGGC 1 cut(s) 616
BcgI CGANNNNNNTGC 2 cut(s) 399, 433
BciT130I CCWGG 4 cut(s) 314, 1159, 2072, 2348
BciVI GTATCC 1 cut(s) 2060
BcuI ACTAGT 1 cut(s) 2321
BfoI RGCGCY 2 cut(s) 1121, 2579
BfrI CTTAAG 1 cut(s) 1352
BfuI GTATCC 1 cut(s) 2060
BglII AGATCT 3 cut(s) 1402, 1993, 2210
BisI GCNGC 3 cut(s) 339, 1850, 1853
BlsI GCNGC 3 cut(s) 340, 1851, 1854
BmcAI AGTACT 1 cut(s) 123
Bme1390I CCNGG 4 cut(s) 314, 1159, 2072, 2348
Bme18I GGWCC 1 cut(s) 1301
BmeT110I CYCGRG 2 cut(s) 1478, 2183
BmgBI CACGTC 3 cut(s) 2220, 2461, 2787
BmgT120I GGNCC 2 cut(s) 1301, 2934
BmiI GGNNCC 3 cut(s) 1737, 1917, 2445
BmrFI CCNGG 4 cut(s) 314, 1159, 2072, 2348
BmsI GCATC 5 cut(s) 505, 943, 976, 985, 1273
BmtI GCTAGC 1 cut(s) 2828
BoxI GACNNNNGTC 1 cut(s) 1246
BpiI GAAGAC 3 cut(s) 1898, 2302, 2511
BplI GAGNNNNNCTC 2 cut(s) 385, 417
BpmI CTGGAG 4 cut(s) 363, 986, 2309, 2456
Bpu14I TTCGAA 1 cut(s) 2032
BpuEI CTTGAG 4 cut(s) 943, 2351, 2574, 2738
BsaAI YACGTR 1 cut(s) 1960
BsaI GGTCTC 2 cut(s) 267, 1392
BsaJI CCNNGG 1 cut(s) 2233
BsaWI WCCGGW 2 cut(s) 12, 2374
Bsc4I CCNNNNNNNGG 6 cut(s) 525, 1238, 1462, 1672, 1997, 2843
Bse118I RCCGGY 1 cut(s) 12
Bse1I ACTGG 6 cut(s) 738, 969, 1723, 2397, 2439, 2936
Bse3DI GCAATG 1 cut(s) 869
BseBI CCWGG 4 cut(s) 314, 1159, 2072, 2348
BseDI CCNNGG 1 cut(s) 2233
BseGI GGATG 9 cut(s) 177, 370, 991, 1000, 1288, 1523, 2343, 2366, 2949
BseLI CCNNNNNNNGG 6 cut(s) 525, 1238, 1462, 1672, 1997, 2843
BseMI GCAATG 1 cut(s) 869
BseMII CTCAG 6 cut(s) 47, 132, 854, 2444, 2664, 2753
BseNI ACTGG 6 cut(s) 738, 969, 1723, 2397, 2439, 2936
BseRI GAGGAG 2 cut(s) 1742, 2159
BseSI GKGCMC 1 cut(s) 1599
BseXI GCAGC 3 cut(s) 350, 1839, 1861
BsgI GTGCAG 2 cut(s) 2227, 2483
BshFI GGCC 3 cut(s) 2238, 2382, 2935
BshNI GGYRCC 3 cut(s) 1735, 1915, 2443
BshTI ACCGGT 1 cut(s) 12
BsiHKAI GWGCWC 3 cut(s) 591, 1086, 1599
BsiHKCI CYCGRG 2 cut(s) 1478, 2183
BsiSI CCGG 2 cut(s) 13, 2375
BslFI GGGAC 2 cut(s) 248, 958
BslI CCNNNNNNNGG 6 cut(s) 525, 1238, 1462, 1672, 1997, 2843
BsmBI CGTCTC 2 cut(s) 2451, 2793
BsmFI GGGAC 2 cut(s) 248, 958
BsmI GAATGC 1 cut(s) 2828
BsnI GGCC 3 cut(s) 2238, 2382, 2935
Bso31I GGTCTC 2 cut(s) 267, 1392
BsoBI CYCGRG 2 cut(s) 1478, 2183
Bsp119I TTCGAA 1 cut(s) 2032
Bsp1286I GDGCHC 3 cut(s) 591, 1086, 1599
Bsp1407I TGTACA 1 cut(s) 2279
BspACI CCGC 2 cut(s) 487, 1739
BspANI GGCC 3 cut(s) 2238, 2382, 2935
BspCNI CTCAG 6 cut(s) 46, 131, 853, 2445, 2665, 2754
BspHI TCATGA 2 cut(s) 1561, 1680
BspLI GGNNCC 3 cut(s) 1737, 1917, 2445
BspOI GCTAGC 1 cut(s) 2828
BspPI GGATC 4 cut(s) 154, 1617, 2636, 2639
BspQI GCTCTTC 2 cut(s) 1001, 2170
BspT104I TTCGAA 1 cut(s) 2032
BspT107I GGYRCC 3 cut(s) 1735, 1915, 2443
BspTI CTTAAG 1 cut(s) 1352
BspTNI GGTCTC 2 cut(s) 267, 1392
BsrDI GCAATG 1 cut(s) 869
BsrFI RCCGGY 1 cut(s) 12
BsrGI TGTACA 1 cut(s) 2279
BsrI ACTGG 6 cut(s) 738, 969, 1723, 2397, 2439, 2936
BssAI RCCGGY 1 cut(s) 12
BssECI CCNNGG 1 cut(s) 2233
BssT1I CCWWGG 1 cut(s) 2233
Bst2UI CCWGG 4 cut(s) 314, 1159, 2072, 2348
Bst4CI ACNGT 9 cut(s) 547, 654, 1078, 1898, 1970, 2279, 2507, 2816, 2885
BstAFI CTTAAG 1 cut(s) 1352
BstAPI GCANNNNNTGC 1 cut(s) 711
BstAUI TGTACA 1 cut(s) 2279
BstBAI YACGTR 1 cut(s) 1960
BstBI TTCGAA 1 cut(s) 2032
BstC8I GCNNGC 6 cut(s) 412, 1397, 1586, 1734, 1871, 2826
BstDEI CTNAG 8 cut(s) 33, 118, 840, 2087, 2453, 2615, 2673, 2762
BstF5I GGATG 9 cut(s) 177, 370, 991, 1000, 1288, 1523, 2343, 2366, 2949
BstH2I RGCGCY 2 cut(s) 1121, 2579
BstHHI GCGC 4 cut(s) 905, 954, 1120, 2578
BstNI CCWGG 4 cut(s) 314, 1159, 2072, 2348
BstNSI RCATGY 2 cut(s) 391, 1093
BstPAI GACNNNNGTC 1 cut(s) 1246
BstSCI CCNGG 4 cut(s) 312, 1157, 2070, 2346
BstSLI GKGCMC 1 cut(s) 1599
BstSNI TACGTA 1 cut(s) 1960
BstV1I GCAGC 3 cut(s) 350, 1839, 1861
BstV2I GAAGAC 3 cut(s) 1898, 2302, 2511
BstX2I RGATCY 3 cut(s) 1402, 1993, 2210
BstYI RGATCY 3 cut(s) 1402, 1993, 2210
BsuI GTATCC 1 cut(s) 2060
BsuRI GGCC 3 cut(s) 2238, 2382, 2935
BtrI CACGTC 3 cut(s) 2220, 2461, 2787
BtsCI GGATG 9 cut(s) 177, 370, 991, 1000, 1288, 1523, 2343, 2366, 2949
BtsI GCAGTG 1 cut(s) 2923
BtsIMutI CAGTG 4 cut(s) 1135, 2110, 2743, 2923
Cac8I GCNNGC 6 cut(s) 412, 1397, 1586, 1734, 1871, 2826
CciI TCATGA 2 cut(s) 1561, 1680
CfoI GCGC 4 cut(s) 905, 954, 1120, 2578
Cfr10I RCCGGY 1 cut(s) 12
Cfr13I GGNCC 2 cut(s) 1301, 2934
CseI GACGC 1 cut(s) 782
CsiI ACCWGGT 2 cut(s) 312, 2070
Csp6I GTAC 4 cut(s) 122, 1916, 2280, 2444
CspAI ACCGGT 1 cut(s) 12
CspCI CAANNNNNGTGG 4 cut(s) 880, 915, 2936, 2971
CviAII CATG 7 cut(s) 131, 308, 388, 772, 1090, 1562, 1681
CviQI GTAC 4 cut(s) 122, 1916, 2280, 2444
DdeI CTNAG 8 cut(s) 33, 118, 840, 2087, 2453, 2615, 2673, 2762
DraI TTTAAA 2 cut(s) 357, 1368
DraIII CACNNNGTG 1 cut(s) 711
DrdI GACNNNNNNGTC 1 cut(s) 2610
DseDI GACNNNNNNGTC 1 cut(s) 2610
Eco105I TACGTA 1 cut(s) 1960
Eco130I CCWWGG 1 cut(s) 2233
Eco147I AGGCCT 1 cut(s) 2382
Eco31I GGTCTC 2 cut(s) 267, 1392
Eco32I GATATC 1 cut(s) 2806
Eco47I GGWCC 1 cut(s) 1301
Eco47III AGCGCT 1 cut(s) 1119
Eco57I CTGAAG 2 cut(s) 662, 1931
Eco88I CYCGRG 2 cut(s) 1478, 2183
EcoRII CCWGG 4 cut(s) 312, 1157, 2070, 2346
EcoRV GATATC 1 cut(s) 2806
EcoT14I CCWWGG 1 cut(s) 2233
EcoT22I ATGCAT 1 cut(s) 309
ErhI CCWWGG 1 cut(s) 2233
Esp3I CGTCTC 2 cut(s) 2451, 2793
FaeI CATG 7 cut(s) 134, 311, 391, 775, 1093, 1565, 1684
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FaqI GGGAC 2 cut(s) 248, 958
FatI CATG 7 cut(s) 130, 307, 387, 771, 1089, 1561, 1680
FblI GTMKAC 1 cut(s) 2002
Fnu4HI GCNGC 3 cut(s) 339, 1850, 1853
FokI GGATG 9 cut(s) 184, 377, 998, 1007, 1295, 1530, 2330, 2353, 2936
Fsp4HI GCNGC 3 cut(s) 339, 1850, 1853
GlaI GCGC 4 cut(s) 904, 953, 1119, 2577
GluI GCNGC 3 cut(s) 339, 1850, 1853
GsuI CTGGAG 4 cut(s) 363, 986, 2309, 2456
HaeII RGCGCY 2 cut(s) 1121, 2579
HaeIII GGCC 3 cut(s) 2238, 2382, 2935
HapII CCGG 2 cut(s) 13, 2375
HgaI GACGC 1 cut(s) 782
HhaI GCGC 4 cut(s) 905, 954, 1120, 2578
Hin1II CATG 7 cut(s) 134, 311, 391, 775, 1093, 1565, 1684
Hin6I GCGC 4 cut(s) 903, 952, 1118, 2576
HinP1I GCGC 4 cut(s) 903, 952, 1118, 2576
HincII GTYRAC 1 cut(s) 2275
HindII GTYRAC 1 cut(s) 2275
HindIII AAGCTT 4 cut(s) 1338, 1484, 1502, 1871
HpaII CCGG 2 cut(s) 13, 2375
HphI GGTGA 4 cut(s) 158, 1925, 2386, 2599
Hpy166II GTNNAC 7 cut(s) 638, 1597, 2003, 2275, 2282, 2327, 2858
Hpy8I GTNNAC 7 cut(s) 638, 1597, 2003, 2275, 2282, 2327, 2858
HpyCH4III ACNGT 9 cut(s) 547, 654, 1078, 1898, 1970, 2279, 2507, 2816, 2885
HpyCH4IV ACGT 5 cut(s) 947, 1959, 2219, 2460, 2786
HpyF3I CTNAG 8 cut(s) 33, 118, 840, 2087, 2453, 2615, 2673, 2762
HpySE526I ACGT 5 cut(s) 947, 1959, 2219, 2460, 2786
Hsp92II CATG 7 cut(s) 134, 311, 391, 775, 1093, 1565, 1684
HspAI GCGC 4 cut(s) 903, 952, 1118, 2576
KpnI GGTACC 2 cut(s) 1919, 2447
LguI GCTCTTC 2 cut(s) 1001, 2170
LmnI GCTCC 3 cut(s) 1729, 2712, 2974
Lsp1109I GCAGC 3 cut(s) 350, 1839, 1861
LweI GCATC 5 cut(s) 505, 943, 976, 985, 1273
MabI ACCWGGT 2 cut(s) 312, 2070
MaeII ACGT 5 cut(s) 947, 1959, 2219, 2460, 2786
MaeIII GTNAC 4 cut(s) 316, 547, 1092, 1322
MfeI CAATTG 4 cut(s) 155, 482, 851, 1244
MflI RGATCY 3 cut(s) 1402, 1993, 2210
MhlI GDGCHC 3 cut(s) 591, 1086, 1599
MlyI GAGTC 7 cut(s) 31, 1342, 1637, 2195, 2245, 2471, 2598
MmeI TCCRAC 4 cut(s) 342, 506, 1178, 2172
Mph1103I ATGCAT 1 cut(s) 309
MroXI GAANNNNTTC 1 cut(s) 1688
MslI CAYNNNNRTG 1 cut(s) 135
MspA1I CMGCKG 4 cut(s) 341, 1741, 1852, 2287
MspCI CTTAAG 1 cut(s) 1352
MspI CCGG 2 cut(s) 13, 2375
MspR9I CCNGG 4 cut(s) 314, 1159, 2072, 2348
MunI CAATTG 4 cut(s) 155, 482, 851, 1244
Mva1269I GAATGC 1 cut(s) 2828
MvaI CCWGG 4 cut(s) 314, 1159, 2072, 2348
NheI GCTAGC 1 cut(s) 2824
NlaIII CATG 7 cut(s) 134, 311, 391, 775, 1093, 1565, 1684
NlaIV GGNNCC 3 cut(s) 1737, 1917, 2445
NmuCI GTSAC 1 cut(s) 547
NsiI ATGCAT 1 cut(s) 309
NspI RCATGY 2 cut(s) 391, 1093
NspV TTCGAA 1 cut(s) 2032
PaeR7I CTCGAG 1 cut(s) 2183
PagI TCATGA 2 cut(s) 1561, 1680
PceI AGGCCT 1 cut(s) 2382
PciI ACATGT 1 cut(s) 1089
PciSI GCTCTTC 2 cut(s) 1001, 2170
PctI GAATGC 1 cut(s) 2828
PdmI GAANNNNTTC 1 cut(s) 1688
PflMI CCANNNNNTGG 2 cut(s) 1238, 1997
PfoI TCCNGGA 1 cut(s) 2346
PinAI ACCGGT 1 cut(s) 12
PkrI GCNGC 3 cut(s) 340, 1851, 1854
PleI GAGTC 7 cut(s) 30, 1342, 1636, 2194, 2245, 2471, 2598
PpsI GAGTC 7 cut(s) 30, 1342, 1636, 2194, 2245, 2471, 2598
Ppu21I YACGTR 1 cut(s) 1960
PscI ACATGT 1 cut(s) 1089
PshAI GACNNNNGTC 1 cut(s) 1246
PshBI ATTAAT 1 cut(s) 2129
PsiI TTATAA 1 cut(s) 1551
Psp6I CCWGG 4 cut(s) 312, 1157, 2070, 2346
PspGI CCWGG 4 cut(s) 312, 1157, 2070, 2346
PspN4I GGNNCC 3 cut(s) 1737, 1917, 2445
PspPI GGNCC 2 cut(s) 1301, 2934
PsrI GAACNNNNNNTAC 2 cut(s) 1254, 1286
PsuI RGATCY 3 cut(s) 1402, 1993, 2210
PvuII CAGCTG 3 cut(s) 341, 1852, 2287
RsaI GTAC 4 cut(s) 123, 1917, 2281, 2445
RsaNI GTAC 4 cut(s) 122, 1916, 2280, 2444
RseI CAYNNNNRTG 1 cut(s) 135
SapI GCTCTTC 2 cut(s) 1001, 2170
SatI GCNGC 3 cut(s) 339, 1850, 1853
Sau96I GGNCC 2 cut(s) 1301, 2934
ScaI AGTACT 1 cut(s) 123
SchI GAGTC 7 cut(s) 31, 1342, 1637, 2195, 2245, 2471, 2598
ScrFI CCNGG 4 cut(s) 314, 1159, 2072, 2348
SduI GDGCHC 3 cut(s) 591, 1086, 1599
SexAI ACCWGGT 2 cut(s) 312, 2070
SfaNI GCATC 5 cut(s) 505, 943, 976, 985, 1273
Sfr274I CTCGAG 1 cut(s) 2183
SfuI TTCGAA 1 cut(s) 2032
SinI GGWCC 1 cut(s) 1301
SlaI CTCGAG 1 cut(s) 2183
SmiMI CAYNNNNRTG 1 cut(s) 135
SmlI CTYRAG 6 cut(s) 958, 1352, 2183, 2330, 2589, 2753
SmoI CTYRAG 6 cut(s) 958, 1352, 2183, 2330, 2589, 2753
SnaBI TACGTA 1 cut(s) 1960
SpeI ACTAGT 1 cut(s) 2321
SseBI AGGCCT 1 cut(s) 2382
SsiI CCGC 2 cut(s) 487, 1739
SspI AATATT 2 cut(s) 1648, 2489
StuI AGGCCT 1 cut(s) 2382
StyD4I CCNGG 4 cut(s) 312, 1157, 2070, 2346
StyI CCWWGG 1 cut(s) 2233
TaaI ACNGT 9 cut(s) 547, 654, 1078, 1898, 1970, 2279, 2507, 2816, 2885
TaiI ACGT 5 cut(s) 950, 1962, 2222, 2463, 2789
TaqI TCGA 7 cut(s) 257, 698, 1086, 2032, 2184, 2475, 2811
TatI WGTACW 2 cut(s) 121, 2279
TscAI CASTG 4 cut(s) 1135, 2110, 2743, 2923
TseFI GTSAC 1 cut(s) 547
TseI GCWGC 3 cut(s) 338, 1849, 1852
Tsp45I GTSAC 1 cut(s) 547
TspDTI ATGAA 9 cut(s) 153, 1164, 1256, 1482, 1550, 1578, 1697, 2821, 2856
TspRI CASTG 4 cut(s) 1135, 2110, 2743, 2923
Van91I CCANNNNNTGG 2 cut(s) 1238, 1997
Vha464I CTTAAG 1 cut(s) 1352
VneI GTGCAC 1 cut(s) 1595
VpaK11BI GGWCC 1 cut(s) 1301
VspI ATTAAT 1 cut(s) 2129
XceI RCATGY 2 cut(s) 391, 1093
XhoI CTCGAG 1 cut(s) 2183
XmiI GTMKAC 1 cut(s) 2002
XmnI GAANNNNTTC 1 cut(s) 1688
ZrmI AGTACT 1 cut(s) 123
Zsp2I ATGCAT 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.