FvH4_7g00360

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000070
Physical Location & Seq
Reverse (-)
980702 .. 984099
3398 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g00360.t1

Sequence Viewer

Length: 1632 bp
ATGCATCACCTTGTTGGTGATCTGGCTCGATGGGCAGCAGGAGAAGTTTGTCTCAGGTTGGAGGATAAAGTGGATGGTAGATGTTCTCGAAAAACACGTCATTCGTCATACATTCCCAGTCAGTATGATGGGGTTAACAAGTTTGAGGCATTCACCGAAGCCAAGCGTTTGCGTACTTTTCTACCACTGAGGCTTTCAGAAGACTTCTGTAATTATGTGACTTGTATGGTAACTCTTGATCTACTGCCGAAATTGGAATACTTGCGGGTACTCTCTTTGAATGGTTATCAGATAACTGAGTTGCCGAATTCAATTGGTAACTTGAAGCATCTACGGTACCTTGATCTTTCTCATACACTAATGAGTCTGCCTGAATCAATATGCACCCTTTGTAACTTACAAACATTAATCTTAGAAAGTTGTTCTAGACTGAAGACACTGCCTACAAATATGTGGTACTTATCAAATCTGAGCCACCTGAACAATTCAGATGTGCCTTCATTGGAAGGAATGCCTCCACGGCTAAGTCAACTGTGCAATTTGCGAACGTTGCCGAATTTTGTGGTGGGCAAAGATAGTCACTCAAGGGTAAGAGAGATAAGACCCCTATCTCTTCTTCGAGGGACATTGTGCCTCTCAAGATTGGAAAATGTGAATGATGTTGGAGATGCAAGGAGGACCAACTTAAGTTGCAAGGAAGGGATTGATACATTGCAGCTGGAATGGAACTATAGAGCAGAGAATGGATTGCTCGTCCTTGACATGTTAAAACCTCATAATAAGATGAAAGAGGTGTTCATCAAGGGTTATGGTGGTTTGCAGTTTTCAGCATGGATTGCAGATCCTTTATTCTCTTATATGGTGCTTGTGAGGTTAGAAAATTGCAAAAACTGTAGATTCTTGCCACCGCTTGGACAATTGCCTTCTCTCCAAACACTATGTATTAGAAATATGTCTGGAGTTGCAAAGGTTGGCCTAGAGTTCTGTGGAGAGGGTACATTGTCTTTTCCAGCATTGGAGACCCTTATTTTTGAGGATATGAAAAACTGGAAAGACTTTCCTTGCCAAGGATATCAAGGACTTGGAGCTTTCCCTTCCTTGAAAATACTTTCAGTGAAAAGATGTCGCAAACTGGAGGGTGAGTTACCTCACGACCTTGATTTGCTAAGAAAACTTGAGATTCATGAGTGTAATGAACTGGTGGTTTCAATTGCCAACTACAAACAGCTCTGTGAACTAAACGTTCGTGATTGCAAAGGGGTGTCGTATAAAAGTGAGCACCACTTTGAGTTGCTCAAATCTATTTATCTTTCAGATTTTTCAGTGCTGAGATTTCAAACTGGAGAATTCATGACCGGATTAAAAAAAGTGGGACAGTTAATGATAGCTAATGGTGATGAACTTTCAACTGAATGGCAGAATGAAGGTAGATTGCTGCAACACCTGATCTCCCTTCGAAGTTTGTTTATTGAAAGAAGCTCCCACCATGATCAACTGCATTGCCTGACGTCACTTCAAATGCTTCACATATATAGATGCCCGAGTCTAGTTTCCATTCCAGAGTCTTGTTTGCCACCTTCTCTTAAAGATATAAAGATTGAAAGGTGTGGTTCTTTGACGTGCTTTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

544

Amino Acids

61.92

Weight (kDa)

8.1

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 80 - 347 1.9e-22 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 198 - 318 3e-30 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1511
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 1 cut(s) 336
AccB7I CCANNNNNTGG 1 cut(s) 911
AciI CCGC 2 cut(s) 265, 908
AclI AACGTT 2 cut(s) 548, 1242
AclWI GGATC 1 cut(s) 836
AcsI RAATTY 3 cut(s) 307, 556, 1346
AcuI CTGAAG 1 cut(s) 452
AcyI GRCGYC 1 cut(s) 1508
AfaI GTAC 5 cut(s) 175, 270, 338, 458, 997
AfiI CCNNNNNNNGG 2 cut(s) 911, 1067
AflII CTTAAG 1 cut(s) 685
AflIII ACRYGT 2 cut(s) 95, 762
AjiI CACGTC 2 cut(s) 98, 1620
AluBI AGCT 5 cut(s) 718, 1088, 1228, 1388, 1479
AluI AGCT 5 cut(s) 718, 1088, 1228, 1388, 1479
Alw21I GWGCWC 1 cut(s) 1281
Alw26I GTCTC 2 cut(s) 56, 1013
AlwI GGATC 1 cut(s) 836
Ama87I CYCGRG 1 cut(s) 1540
AoxI GGCC 1 cut(s) 973
ApeKI GCWGC 3 cut(s) 35, 715, 1435
ApoI RAATTY 3 cut(s) 307, 556, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 82, 114
AseI ATTAAT 1 cut(s) 407
Asp718I GGTACC 1 cut(s) 336
AspS9I GGNCC 1 cut(s) 678
AsuHPI GGTGA 4 cut(s) 29, 145, 1151, 1406
AsuII TTCGAA 1 cut(s) 1456
AvaI CYCGRG 1 cut(s) 1540
AvaII GGWCC 1 cut(s) 678
BanI GGYRCC 1 cut(s) 336
BbsI GAAGAC 2 cut(s) 207, 440
Bbv12I GWGCWC 1 cut(s) 1281
BbvI GCAGC 3 cut(s) 47, 727, 1422
BccI CCATC 3 cut(s) 24, 68, 122
BceAI ACGGC 1 cut(s) 536
BclI TGATCA 1 cut(s) 1489
BcoDI GTCTC 2 cut(s) 56, 1013
BfaI CTAG 3 cut(s) 426, 977, 1547
BfmI CTRYAG 2 cut(s) 730, 892
BfrI CTTAAG 1 cut(s) 685
BglI GCCNNNNNGGC 1 cut(s) 520
BisI GCNGC 3 cut(s) 36, 716, 1436
BlsI GCNGC 3 cut(s) 37, 717, 1437
Bme18I GGWCC 1 cut(s) 678
BmeT110I CYCGRG 1 cut(s) 1540
BmgBI CACGTC 2 cut(s) 98, 1620
BmgT120I GGNCC 1 cut(s) 678
BmiI GGNNCC 1 cut(s) 338
BmrI ACTGGG 1 cut(s) 111
BmsI GCATC 4 cut(s) 13, 337, 658, 1526
BmuI ACTGGG 1 cut(s) 111
BpiI GAAGAC 2 cut(s) 207, 440
BpmI CTGGAG 3 cut(s) 978, 1154, 1362
Bpu14I TTCGAA 1 cut(s) 1456
BpuEI CTTGAG 3 cut(s) 568, 622, 1196
BsaHI GRCGYC 1 cut(s) 1508
BsaI GGTCTC 1 cut(s) 1013
BsaJI CCNNGG 2 cut(s) 518, 1066
BsaWI WCCGGW 1 cut(s) 1355
BsaXI ACNNNNNCTCC 4 cut(s) 1127, 1157, 1433, 1463
Bsc4I CCNNNNNNNGG 2 cut(s) 911, 1067
Bse1I ACTGG 5 cut(s) 117, 1052, 1137, 1203, 1345
Bse3DI GCAATG 2 cut(s) 710, 1498
BseDI CCNNGG 2 cut(s) 518, 1066
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 2 cut(s) 911, 1067
BseMI GCAATG 2 cut(s) 710, 1498
BseMII CTCAG 5 cut(s) 67, 179, 288, 461, 1319
BseNI ACTGG 5 cut(s) 117, 1052, 1137, 1203, 1345
BseXI GCAGC 3 cut(s) 47, 727, 1422
BshFI GGCC 1 cut(s) 975
BshNI GGYRCC 1 cut(s) 336
BsiHKAI GWGCWC 1 cut(s) 1281
BsiHKCI CYCGRG 1 cut(s) 1540
BsiSI CCGG 1 cut(s) 1356
BslFI GGGAC 2 cut(s) 637, 1386
BslI CCNNNNNNNGG 2 cut(s) 911, 1067
BsmAI GTCTC 2 cut(s) 56, 1013
BsmFI GGGAC 2 cut(s) 637, 1386
BsmI GAATGC 2 cut(s) 149, 516
BsnI GGCC 1 cut(s) 975
Bso31I GGTCTC 1 cut(s) 1013
BsoBI CYCGRG 1 cut(s) 1540
Bsp119I TTCGAA 1 cut(s) 1456
Bsp1286I GDGCHC 1 cut(s) 1281
Bsp143I GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
BspACI CCGC 2 cut(s) 265, 908
BspANI GGCC 1 cut(s) 975
BspCNI CTCAG 5 cut(s) 66, 180, 289, 462, 1320
BspHI TCATGA 2 cut(s) 1183, 1350
BspLI GGNNCC 1 cut(s) 338
BspPI GGATC 1 cut(s) 836
BspT104I TTCGAA 1 cut(s) 1456
BspT107I GGYRCC 1 cut(s) 336
BspTI CTTAAG 1 cut(s) 685
BspTNI GGTCTC 1 cut(s) 1013
BsrDI GCAATG 2 cut(s) 710, 1498
BsrI ACTGG 5 cut(s) 117, 1052, 1137, 1203, 1345
BssECI CCNNGG 2 cut(s) 518, 1066
BssMI GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
BssNI GRCGYC 1 cut(s) 1508
BssT1I CCWWGG 1 cut(s) 1066
Bst4CI ACNGT 4 cut(s) 336, 534, 893, 1377
Bst6I CTCTTC 1 cut(s) 618
BstACI GRCGYC 1 cut(s) 1508
BstAFI CTTAAG 1 cut(s) 685
BstAPI GCANNNNNTGC 1 cut(s) 836
BstBI TTCGAA 1 cut(s) 1456
BstDEI CTNAG 8 cut(s) 53, 188, 297, 412, 470, 524, 1166, 1328
BstDSI CCRYGG 1 cut(s) 518
BstENI CCTNNNNNAGG 1 cut(s) 1065
BstF5I GGATG 1 cut(s) 79
BstKTI GATC 6 cut(s) 22, 241, 346, 844, 1449, 1492
BstMAI GTCTC 2 cut(s) 56, 1013
BstMBI GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
BstMWI GCNNNNNNNGC 4 cut(s) 32, 520, 550, 836
BstNSI RCATGY 1 cut(s) 766
BstSFI CTRYAG 2 cut(s) 730, 892
BstV1I GCAGC 3 cut(s) 47, 727, 1422
BstV2I GAAGAC 2 cut(s) 207, 440
BstX2I RGATCY 1 cut(s) 841
BstYI RGATCY 1 cut(s) 841
BsuRI GGCC 1 cut(s) 975
BtgI CCRYGG 1 cut(s) 518
BtrI CACGTC 2 cut(s) 98, 1620
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 437
BtsIMutI CAGTG 4 cut(s) 185, 437, 1119, 1329
CciI TCATGA 2 cut(s) 1183, 1350
Cfr13I GGNCC 1 cut(s) 678
Csp6I GTAC 5 cut(s) 174, 269, 337, 457, 996
CviAII CATG 6 cut(s) 763, 831, 1184, 1351, 1487, 1629
CviQI GTAC 5 cut(s) 174, 269, 337, 457, 996
DdeI CTNAG 8 cut(s) 53, 188, 297, 412, 470, 524, 1166, 1328
DpnI GATC 6 cut(s) 21, 240, 345, 843, 1448, 1491
DpnII GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Eco130I CCWWGG 1 cut(s) 1066
Eco31I GGTCTC 1 cut(s) 1013
Eco32I GATATC 1 cut(s) 1073
Eco47I GGWCC 1 cut(s) 678
Eco57I CTGAAG 1 cut(s) 452
Eco88I CYCGRG 1 cut(s) 1540
EcoNI CCTNNNNNAGG 1 cut(s) 1065
EcoRI GAATTC 2 cut(s) 307, 1346
EcoRV GATATC 1 cut(s) 1073
EcoT14I CCWWGG 1 cut(s) 1066
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 1066
FaeI CATG 6 cut(s) 766, 834, 1187, 1354, 1490, 1632
FaqI GGGAC 2 cut(s) 637, 1386
FatI CATG 6 cut(s) 762, 830, 1183, 1350, 1486, 1628
FauI CCCGC 1 cut(s) 258
FbaI TGATCA 1 cut(s) 1489
Fnu4HI GCNGC 3 cut(s) 36, 716, 1436
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 3 cut(s) 36, 716, 1436
FspBI CTAG 3 cut(s) 426, 977, 1547
GluI GCNGC 3 cut(s) 36, 716, 1436
GsuI CTGGAG 3 cut(s) 978, 1154, 1362
HaeIII GGCC 1 cut(s) 975
HapII CCGG 1 cut(s) 1356
Hin1I GRCGYC 1 cut(s) 1508
Hin1II CATG 6 cut(s) 766, 834, 1187, 1354, 1490, 1632
HincII GTYRAC 2 cut(s) 136, 530
HindII GTYRAC 2 cut(s) 136, 530
HinfI GANTC 6 cut(s) 364, 374, 897, 1180, 1543, 1562
HpaI GTTAAC 1 cut(s) 136
HpaII CCGG 1 cut(s) 1356
HphI GGTGA 4 cut(s) 29, 145, 1151, 1406
Hpy166II GTNNAC 3 cut(s) 136, 530, 1235
Hpy188I TCNGA 5 cut(s) 199, 291, 471, 490, 1315
Hpy8I GTNNAC 3 cut(s) 136, 530, 1235
HpyAV CCTTC 8 cut(s) 500, 507, 692, 933, 1104, 1418, 1463, 1587
HpyCH4III ACNGT 4 cut(s) 336, 534, 893, 1377
HpyCH4IV ACGT 5 cut(s) 97, 548, 1242, 1508, 1619
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 520, 550, 836
HpyF3I CTNAG 8 cut(s) 53, 188, 297, 412, 470, 524, 1166, 1328
HpySE526I ACGT 5 cut(s) 97, 548, 1242, 1508, 1619
Hsp92I GRCGYC 1 cut(s) 1508
Hsp92II CATG 6 cut(s) 766, 834, 1187, 1354, 1490, 1632
KpnI GGTACC 1 cut(s) 340
Ksp22I TGATCA 1 cut(s) 1489
KspAI GTTAAC 1 cut(s) 136
Kzo9I GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
LmnI GCTCC 2 cut(s) 1085, 1484
Lsp1109I GCAGC 3 cut(s) 47, 727, 1422
LweI GCATC 4 cut(s) 13, 337, 658, 1526
MaeI CTAG 3 cut(s) 426, 977, 1547
MaeII ACGT 5 cut(s) 97, 548, 1242, 1508, 1619
MaeIII GTNAC 7 cut(s) 217, 229, 317, 392, 578, 1143, 1509
MalI GATC 6 cut(s) 21, 240, 345, 843, 1448, 1491
MboI GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
MboII GAAGA 4 cut(s) 212, 445, 605, 608
MfeI CAATTG 3 cut(s) 312, 917, 1209
MflI RGATCY 1 cut(s) 841
MhlI GDGCHC 1 cut(s) 1281
MlyI GAGTC 3 cut(s) 373, 1552, 1571
MmeI TCCRAC 2 cut(s) 39, 643
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 7 cut(s) 135, 407, 686, 767, 1361, 1379, 1584
MspA1I CMGCKG 1 cut(s) 718
MspCI CTTAAG 1 cut(s) 685
MspI CCGG 1 cut(s) 1356
MunI CAATTG 3 cut(s) 312, 917, 1209
Mva1269I GAATGC 2 cut(s) 149, 516
MwoI GCNNNNNNNGC 4 cut(s) 32, 520, 550, 836
NdeII GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
NlaIII CATG 6 cut(s) 766, 834, 1187, 1354, 1490, 1632
NlaIV GGNNCC 1 cut(s) 338
NmuCI GTSAC 3 cut(s) 217, 578, 1509
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 766
NspV TTCGAA 1 cut(s) 1456
PagI TCATGA 2 cut(s) 1183, 1350
PciI ACATGT 1 cut(s) 762
PcsI WCGNNNNNNNCGW 1 cut(s) 94
PctI GAATGC 2 cut(s) 149, 516
PfeI GAWTC 3 cut(s) 374, 897, 1180
PflMI CCANNNNNTGG 1 cut(s) 911
PkrI GCNGC 3 cut(s) 37, 717, 1437
PleI GAGTC 3 cut(s) 372, 1551, 1570
PpsI GAGTC 3 cut(s) 372, 1551, 1570
PscI ACATGT 1 cut(s) 762
PshBI ATTAAT 1 cut(s) 407
Psp1406I AACGTT 2 cut(s) 548, 1242
PspN4I GGNNCC 1 cut(s) 338
PspPI GGNCC 1 cut(s) 678
PsuI RGATCY 1 cut(s) 841
PvuII CAGCTG 1 cut(s) 718
RsaI GTAC 5 cut(s) 175, 270, 338, 458, 997
RsaNI GTAC 5 cut(s) 174, 269, 337, 457, 996
SaqAI TTAA 7 cut(s) 135, 407, 686, 767, 1361, 1379, 1584
SatI GCNGC 3 cut(s) 36, 716, 1436
Sau3AI GATC 6 cut(s) 19, 238, 343, 841, 1446, 1489
Sau96I GGNCC 1 cut(s) 678
SchI GAGTC 3 cut(s) 373, 1552, 1571
SduI GDGCHC 1 cut(s) 1281
SfaNI GCATC 4 cut(s) 13, 337, 658, 1526
SfcI CTRYAG 2 cut(s) 730, 892
SfuI TTCGAA 1 cut(s) 1456
SinI GGWCC 1 cut(s) 678
SmlI CTYRAG 4 cut(s) 583, 637, 685, 1175
SmoI CTYRAG 4 cut(s) 583, 637, 685, 1175
SsiI CCGC 2 cut(s) 265, 908
SspMI CTAG 3 cut(s) 426, 977, 1547
StyI CCWWGG 1 cut(s) 1066
TaaI ACNGT 4 cut(s) 336, 534, 893, 1377
TaiI ACGT 5 cut(s) 100, 551, 1245, 1511, 1622
TaqI TCGA 4 cut(s) 28, 88, 619, 1456
TfiI GAWTC 3 cut(s) 374, 897, 1180
Tru1I TTAA 7 cut(s) 135, 407, 686, 767, 1361, 1379, 1584
Tru9I TTAA 7 cut(s) 135, 407, 686, 767, 1361, 1379, 1584
TscAI CASTG 4 cut(s) 192, 444, 1119, 1329
TseFI GTSAC 3 cut(s) 217, 578, 1509
TseI GCWGC 3 cut(s) 35, 715, 1435
Tsp45I GTSAC 3 cut(s) 217, 578, 1509
TspDTI ATGAA 9 cut(s) 489, 787, 800, 1055, 1172, 1209, 1339, 1413, 1437
TspRI CASTG 4 cut(s) 192, 444, 1119, 1329
Van91I CCANNNNNTGG 1 cut(s) 911
Vha464I CTTAAG 1 cut(s) 685
VpaK11BI GGWCC 1 cut(s) 678
VspI ATTAAT 1 cut(s) 407
XagI CCTNNNNNAGG 1 cut(s) 1065
XapI RAATTY 3 cut(s) 307, 556, 1346
XbaI TCTAGA 1 cut(s) 425
XceI RCATGY 1 cut(s) 766
XspI CTAG 3 cut(s) 426, 977, 1547
ZraI GACGTC 1 cut(s) 1509
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.