Rmu_sc0003629.1_g000067

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003629.1
OG0000070
Physical Location & Seq
Forward (+)
284386 .. 291254
6869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003629.1_g000067.1.cds

Sequence Viewer

Length: 1428 bp
atggcagtggtggagatctttctggcgtcattccttaaggtgctgcttaataggctgacggatgacttcctcaattttgcacgacaagggggtattgacaagaagctgaaaaaatggaaggacatgctggctgcaatcggagctgtgctgcatgatgctgaagagaagcaactgacgagcgaggcagtgaaactgtggctagatgatctgaaagacctggcttatgatgtggaagatgttttggatgagttttccactgagatgatacaccgcaaagtcaaggagcagcaatatggggctaccatgagcaaggtacgaggcttcattcctaaaattagatttagcttcaattttaactccaagataaagcttattactgatcagttacaagacatatctgaacggaaagacaagcttggtttgacttatattgggacaatatctactagtaaggaatggctaaggccaccgagttcatgtgtgttgggtggaacacctgttgttggaagagatgtggacaaagcaaagattgttgagtttctctcaagagatgagcctagcacaatcaattttcatgttgttgccattgttggtatgcctggattggggaaaacaacacttgctcagtatatattcaatgacagtgatgatgatgtcctgaaacagttcaatcttaaggtctgggtatcagtgtcggataactttaacattgtaagagtaactaaagcaattcttgaatcagtcacgtcccaacactgtcgatggaaggaattcagtcaaattcaagatggcttgagaaaggaactagcaagtaaaaagtatttaattgttttggatgacatttggaactcatgtgactatgatctatggatgacactacagtccccttttcatgctggtgcaccaggaagtaaaataattgtgacaacacgtgatgcaggagttgcaaaaatagtgagagccattgatgttcacaatttggactatatatcaaatgatgattgttggaaagtattcaagcaacatgcactcttggatgttagtaattgcggaccacagaactttgagccttggtcagtggaggccgccacaatgatgcagatcccagtcgccctgaaagccgacggcgtcgacaacaacacctcggctctggctcgatccagcaacccccttcctcataaccaccctcagtcgagcatggactcaaccggagccctggaaaagcttggtcgagatcgcgacgccgttgcagacgagaccacagcctctccaagcccacgccgcccttcactcgcctctgcctgcaagctaaacttaagggagagactaagagatttgtggtgttacgttgcatactggagtctggcgctggatcttttttcagccattgatcaccgacagctgccagttgagactcgagagtattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

475

Amino Acids

53.54

Weight (kDa)

6.11

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 880
AccI GTMKAC 1 cut(s) 1131
AccII CGCG 1 cut(s) 1239
AciI CCGC 4 cut(s) 271, 1050, 1086, 1282
AclWI GGATC 3 cut(s) 1096, 1152, 1380
AcsI RAATTY 2 cut(s) 770, 780
AcuI CTGAAG 1 cut(s) 180
AcvI CACGTG 1 cut(s) 932
AcyI GRCGYC 3 cut(s) 26, 1128, 1242
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 2 cut(s) 503, 605
AflII CTTAAG 3 cut(s) 35, 674, 1315
AflIII ACRYGT 1 cut(s) 929
AgsI TTSAA 6 cut(s) 349, 637, 670, 737, 785, 1018
AhlI ACTAGT 1 cut(s) 446
AjiI CACGTC 1 cut(s) 747
AjnI CCWGG 4 cut(s) 216, 598, 904, 1215
AluBI AGCT 8 cut(s) 106, 143, 345, 370, 415, 1225, 1309, 1402
AluI AGCT 8 cut(s) 106, 143, 345, 370, 415, 1225, 1309, 1402
Alw21I GWGCWC 1 cut(s) 904
Alw26I GTCTC 3 cut(s) 1250, 1318, 1406
Alw44I GTGCAC 1 cut(s) 900
AlwI GGATC 3 cut(s) 1096, 1152, 1380
Ama87I CYCGRG 1 cut(s) 1416
AoxI GGCC 2 cut(s) 464, 1083
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 5 cut(s) 43, 131, 148, 286, 1402
ApoI RAATTY 2 cut(s) 770, 780
Asp700I GAANNNNTTC 3 cut(s) 665, 770, 1013
AspLEI GCGC 1 cut(s) 1369
AspS9I GGNCC 1 cut(s) 1052
AsuHPI GGTGA 1 cut(s) 1385
AvaI CYCGRG 1 cut(s) 1416
AvaII GGWCC 1 cut(s) 1052
BaeGI GKGCMC 1 cut(s) 904
BanII GRGCYC 1 cut(s) 1216
BbrPI CACGTG 1 cut(s) 932
Bbv12I GWGCWC 1 cut(s) 904
BbvI GCAGC 5 cut(s) 30, 118, 135, 298, 1389
BccI CCATC 2 cut(s) 756, 782
BceAI ACGGC 2 cut(s) 1141, 1229
BcgI CGANNNNNNTGC 2 cut(s) 1229, 1263
BciT130I CCWGG 4 cut(s) 218, 600, 906, 1217
BclI TGATCA 2 cut(s) 379, 1390
BcoDI GTCTC 3 cut(s) 1250, 1318, 1406
BcuI ACTAGT 1 cut(s) 446
BfaI CTAG 4 cut(s) 200, 447, 558, 806
BfmI CTRYAG 1 cut(s) 878
BfoI RGCGCY 1 cut(s) 1370
BfrI CTTAAG 3 cut(s) 35, 674, 1315
BglII AGATCT 1 cut(s) 15
BisI GCNGC 7 cut(s) 44, 132, 149, 287, 1086, 1282, 1403
BlsI GCNGC 7 cut(s) 45, 133, 150, 288, 1087, 1283, 1404
Bme1390I CCNGG 4 cut(s) 218, 600, 906, 1217
Bme18I GGWCC 1 cut(s) 1052
BmeT110I CYCGRG 1 cut(s) 1416
BmgBI CACGTC 1 cut(s) 747
BmgT120I GGNCC 1 cut(s) 1052
BmiI GGNNCC 1 cut(s) 1213
BmrFI CCNGG 4 cut(s) 218, 600, 906, 1217
BmrI ACTGGG 1 cut(s) 1100
BmsI GCATC 3 cut(s) 145, 925, 1086
BmuI ACTGGG 1 cut(s) 1100
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BpmI CTGGAG 1 cut(s) 1378
Bpu10I CCTNAGC 1 cut(s) 461
BpuEI CTTGAG 2 cut(s) 529, 814
BsaAI YACGTR 1 cut(s) 932
BsaBI GATNNNNATC 1 cut(s) 1100
BsaHI GRCGYC 3 cut(s) 26, 1128, 1242
BsaI GGTCTC 1 cut(s) 1250
BsaJI CCNNGG 3 cut(s) 1070, 1143, 1215
BsaWI WCCGGW 1 cut(s) 1208
BsaXI ACNNNNNCTCC 2 cut(s) 1252, 1282
Bsc4I CCNNNNNNNGG 2 cut(s) 503, 605
Bse1I ACTGG 3 cut(s) 1106, 1361, 1406
Bse8I GATNNNNATC 1 cut(s) 1100
BseBI CCWGG 4 cut(s) 218, 600, 906, 1217
BseDI CCNNGG 3 cut(s) 1070, 1143, 1215
BseGI GGATG 5 cut(s) 67, 250, 841, 876, 1042
BseJI GATNNNNATC 1 cut(s) 1100
BseLI CCNNNNNNNGG 2 cut(s) 503, 605
BseMII CTCAG 3 cut(s) 249, 638, 1202
BseNI ACTGG 3 cut(s) 1106, 1361, 1406
BseSI GKGCMC 1 cut(s) 904
BseXI GCAGC 5 cut(s) 30, 118, 135, 298, 1389
Bsh1236I CGCG 1 cut(s) 1239
BshFI GGCC 2 cut(s) 466, 1085
BsiHKAI GWGCWC 1 cut(s) 904
BsiHKCI CYCGRG 1 cut(s) 1416
BsiSI CCGG 1 cut(s) 1209
BslFI GGGAC 3 cut(s) 448, 733, 868
BslI CCNNNNNNNGG 2 cut(s) 503, 605
BsmAI GTCTC 3 cut(s) 1250, 1318, 1406
BsmFI GGGAC 3 cut(s) 448, 733, 868
BsnI GGCC 2 cut(s) 466, 1085
Bso31I GGTCTC 1 cut(s) 1250
BsoBI CYCGRG 1 cut(s) 1416
Bsp1286I GDGCHC 2 cut(s) 904, 1216
Bsp143I GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
Bsp68I TCGCGA 1 cut(s) 1239
BspACI CCGC 4 cut(s) 271, 1050, 1086, 1282
BspANI GGCC 2 cut(s) 466, 1085
BspCNI CTCAG 3 cut(s) 250, 637, 1201
BspFNI CGCG 1 cut(s) 1239
BspLI GGNNCC 1 cut(s) 1213
BspPI GGATC 3 cut(s) 1096, 1152, 1380
BspTI CTTAAG 3 cut(s) 35, 674, 1315
BspTNI GGTCTC 1 cut(s) 1250
BsrI ACTGG 3 cut(s) 1106, 1361, 1406
BssECI CCNNGG 3 cut(s) 1070, 1143, 1215
BssMI GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
BssNI GRCGYC 3 cut(s) 26, 1128, 1242
BssT1I CCWWGG 1 cut(s) 1070
Bst2UI CCWGG 4 cut(s) 218, 600, 906, 1217
Bst4CI ACNGT 5 cut(s) 195, 644, 666, 758, 882
Bst6I CTCTTC 2 cut(s) 156, 502
BstACI GRCGYC 3 cut(s) 26, 1128, 1242
BstAFI CTTAAG 3 cut(s) 35, 674, 1315
BstAPI GCANNNNNTGC 1 cut(s) 944
BstBAI YACGTR 1 cut(s) 932
BstC8I GCNNGC 3 cut(s) 129, 1303, 1307
BstDEI CTNAG 5 cut(s) 258, 461, 624, 1188, 1328
BstF5I GGATG 5 cut(s) 67, 250, 841, 876, 1042
BstFNI CGCG 1 cut(s) 1239
BstH2I RGCGCY 1 cut(s) 1370
BstHHI GCGC 1 cut(s) 1369
BstKTI GATC 9 cut(s) 18, 208, 382, 865, 1104, 1160, 1237, 1375, 1393
BstMAI GTCTC 3 cut(s) 1250, 1318, 1406
BstMBI GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
BstMWI GCNNNNNNNGC 5 cut(s) 52, 140, 944, 1118, 1281
BstNI CCWGG 4 cut(s) 218, 600, 906, 1217
BstNSI RCATGY 2 cut(s) 127, 1028
BstSCI CCNGG 4 cut(s) 216, 598, 904, 1215
BstSFI CTRYAG 1 cut(s) 878
BstSLI GKGCMC 1 cut(s) 904
BstUI CGCG 1 cut(s) 1239
BstV1I GCAGC 5 cut(s) 30, 118, 135, 298, 1389
BstX2I RGATCY 3 cut(s) 15, 1101, 1372
BstYI RGATCY 3 cut(s) 15, 1101, 1372
BsuRI GGCC 2 cut(s) 466, 1085
BtrI CACGTC 1 cut(s) 747
BtsCI GGATG 5 cut(s) 67, 250, 841, 876, 1042
BtsI GCAGTG 2 cut(s) 12, 192
BtsIMutI CAGTG 7 cut(s) 12, 192, 255, 649, 696, 754, 1083
BtuMI TCGCGA 1 cut(s) 1239
Cac8I GCNNGC 3 cut(s) 129, 1303, 1307
CfoI GCGC 1 cut(s) 1369
Cfr13I GGNCC 1 cut(s) 1052
CseI GACGC 3 cut(s) 15, 1117, 1250
Csp6I GTAC 1 cut(s) 314
CviAII CATG 9 cut(s) 124, 152, 304, 477, 575, 852, 893, 1025, 1198
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 5 cut(s) 258, 461, 624, 1188, 1328
DpnI GATC 9 cut(s) 17, 207, 381, 864, 1103, 1159, 1236, 1374, 1392
DpnII GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
DrdI GACNNNNNNGTC 1 cut(s) 880
DseDI GACNNNNNNGTC 1 cut(s) 880
Eam1104I CTCTTC 2 cut(s) 156, 502
EarI CTCTTC 2 cut(s) 156, 502
Eco130I CCWWGG 1 cut(s) 1070
Eco24I GRGCYC 1 cut(s) 1216
Eco31I GGTCTC 1 cut(s) 1250
Eco47I GGWCC 1 cut(s) 1052
Eco57I CTGAAG 1 cut(s) 180
Eco72I CACGTG 1 cut(s) 932
Eco88I CYCGRG 1 cut(s) 1416
EcoRI GAATTC 1 cut(s) 770
EcoRII CCWGG 4 cut(s) 216, 598, 904, 1215
EcoT14I CCWWGG 1 cut(s) 1070
EcoT38I GRGCYC 1 cut(s) 1216
ErhI CCWWGG 1 cut(s) 1070
FaeI CATG 9 cut(s) 127, 155, 307, 480, 578, 855, 896, 1028, 1201
FalI AAGNNNNNCTT 6 cut(s) 399, 431, 717, 749, 1298, 1330
FaqI GGGAC 3 cut(s) 448, 733, 868
FatI CATG 9 cut(s) 123, 151, 303, 476, 574, 851, 892, 1024, 1197
FbaI TGATCA 2 cut(s) 379, 1390
FblI GTMKAC 1 cut(s) 1131
Fnu4HI GCNGC 7 cut(s) 44, 132, 149, 287, 1086, 1282, 1403
FokI GGATG 5 cut(s) 74, 257, 848, 883, 1049
FriOI GRGCYC 1 cut(s) 1216
Fsp4HI GCNGC 7 cut(s) 44, 132, 149, 287, 1086, 1282, 1403
FspBI CTAG 4 cut(s) 200, 447, 558, 806
GlaI GCGC 1 cut(s) 1368
GluI GCNGC 7 cut(s) 44, 132, 149, 287, 1086, 1282, 1403
GsuI CTGGAG 1 cut(s) 1378
HaeII RGCGCY 1 cut(s) 1370
HaeIII GGCC 2 cut(s) 466, 1085
HapII CCGG 1 cut(s) 1209
HgaI GACGC 3 cut(s) 15, 1117, 1250
HhaI GCGC 1 cut(s) 1369
Hin1I GRCGYC 3 cut(s) 26, 1128, 1242
Hin1II CATG 9 cut(s) 127, 155, 307, 480, 578, 855, 896, 1028, 1201
Hin6I GCGC 1 cut(s) 1367
HinP1I GCGC 1 cut(s) 1367
HincII GTYRAC 1 cut(s) 1132
HindII GTYRAC 1 cut(s) 1132
HindIII AAGCTT 3 cut(s) 368, 413, 1223
HinfI GANTC 4 cut(s) 737, 1202, 1360, 1414
HpaII CCGG 1 cut(s) 1209
HphI GGTGA 1 cut(s) 1385
Hpy166II GTNNAC 4 cut(s) 517, 902, 973, 1132
Hpy188I TCNGA 4 cut(s) 140, 210, 400, 697
Hpy188III TCNNGA 7 cut(s) 546, 658, 734, 785, 1232, 1238, 1418
Hpy8I GTNNAC 4 cut(s) 517, 902, 973, 1132
Hpy99I CGWCG 3 cut(s) 1127, 1133, 1244
HpyAV CCTTC 4 cut(s) 112, 760, 1181, 1296
HpyCH4III ACNGT 5 cut(s) 195, 644, 666, 758, 882
HpyCH4IV ACGT 3 cut(s) 746, 931, 1347
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 140, 944, 1118, 1281
HpyF3I CTNAG 5 cut(s) 258, 461, 624, 1188, 1328
HpySE526I ACGT 3 cut(s) 746, 931, 1347
Hsp92I GRCGYC 3 cut(s) 26, 1128, 1242
Hsp92II CATG 9 cut(s) 127, 155, 307, 480, 578, 855, 896, 1028, 1201
HspAI GCGC 1 cut(s) 1367
Ksp22I TGATCA 2 cut(s) 379, 1390
Kzo9I GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
LmnI GCTCC 3 cut(s) 140, 283, 1211
Lsp1109I GCAGC 5 cut(s) 30, 118, 135, 298, 1389
LweI GCATC 3 cut(s) 145, 925, 1086
MaeI CTAG 4 cut(s) 200, 447, 558, 806
MaeII ACGT 3 cut(s) 746, 931, 1347
MaeIII GTNAC 6 cut(s) 384, 718, 742, 854, 922, 1343
MalI GATC 9 cut(s) 17, 207, 381, 864, 1103, 1159, 1236, 1374, 1392
MboI GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
MboII GAAGA 3 cut(s) 173, 245, 519
MflI RGATCY 3 cut(s) 15, 1101, 1372
MhlI GDGCHC 2 cut(s) 904, 1216
MlyI GAGTC 3 cut(s) 1196, 1369, 1408
MmeI TCCRAC 3 cut(s) 484, 675, 986
MnlI CCTC 9 cut(s) 80, 175, 311, 1075, 1153, 1185, 1197, 1276, 1306
MroXI GAANNNNTTC 3 cut(s) 665, 770, 1013
MseI TTAA 7 cut(s) 36, 48, 354, 675, 705, 824, 1316
MslI CAYNNNNRTG 3 cut(s) 260, 897, 1094
MspA1I CMGCKG 1 cut(s) 1402
MspCI CTTAAG 3 cut(s) 35, 674, 1315
MspI CCGG 1 cut(s) 1209
MspR9I CCNGG 4 cut(s) 218, 600, 906, 1217
MvaI CCWGG 4 cut(s) 218, 600, 906, 1217
MvnI CGCG 1 cut(s) 1239
MwoI GCNNNNNNNGC 5 cut(s) 52, 140, 944, 1118, 1281
NdeII GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
NlaIII CATG 9 cut(s) 127, 155, 307, 480, 578, 855, 896, 1028, 1201
NlaIV GGNNCC 1 cut(s) 1213
NmeAIII GCCGAG 1 cut(s) 1124
NmuCI GTSAC 3 cut(s) 742, 854, 922
NruI TCGCGA 1 cut(s) 1239
NspI RCATGY 2 cut(s) 127, 1028
PaeR7I CTCGAG 1 cut(s) 1416
PdmI GAANNNNTTC 3 cut(s) 665, 770, 1013
PfeI GAWTC 1 cut(s) 737
PflFI GACNNNGTC 1 cut(s) 1127
PkrI GCNGC 7 cut(s) 45, 133, 150, 288, 1087, 1283, 1404
PleI GAGTC 3 cut(s) 1196, 1368, 1408
PmaCI CACGTG 1 cut(s) 932
PmlI CACGTG 1 cut(s) 932
PpsI GAGTC 3 cut(s) 1196, 1368, 1408
Ppu21I YACGTR 1 cut(s) 932
Psp6I CCWGG 4 cut(s) 216, 598, 904, 1215
PspCI CACGTG 1 cut(s) 932
PspGI CCWGG 4 cut(s) 216, 598, 904, 1215
PspN4I GGNNCC 1 cut(s) 1213
PspPI GGNCC 1 cut(s) 1052
PsuI RGATCY 3 cut(s) 15, 1101, 1372
PsyI GACNNNGTC 1 cut(s) 1127
PvuII CAGCTG 1 cut(s) 1402
RruI TCGCGA 1 cut(s) 1239
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 3 cut(s) 260, 897, 1094
SalI GTCGAC 1 cut(s) 1130
SaqAI TTAA 7 cut(s) 36, 48, 354, 675, 705, 824, 1316
SatI GCNGC 7 cut(s) 44, 132, 149, 287, 1086, 1282, 1403
Sau3AI GATC 9 cut(s) 15, 205, 379, 862, 1101, 1157, 1234, 1372, 1390
Sau96I GGNCC 1 cut(s) 1052
SchI GAGTC 3 cut(s) 1196, 1369, 1408
ScrFI CCNGG 4 cut(s) 218, 600, 906, 1217
SduI GDGCHC 2 cut(s) 904, 1216
SfaNI GCATC 3 cut(s) 145, 925, 1086
SfcI CTRYAG 1 cut(s) 878
Sfr274I CTCGAG 1 cut(s) 1416
SinI GGWCC 1 cut(s) 1052
SlaI CTCGAG 1 cut(s) 1416
SmiMI CAYNNNNRTG 3 cut(s) 260, 897, 1094
SmlI CTYRAG 6 cut(s) 35, 544, 674, 793, 1315, 1416
SmoI CTYRAG 6 cut(s) 35, 544, 674, 793, 1315, 1416
SpeI ACTAGT 1 cut(s) 446
SsiI CCGC 4 cut(s) 271, 1050, 1086, 1282
SspMI CTAG 4 cut(s) 200, 447, 558, 806
StyD4I CCNGG 4 cut(s) 216, 598, 904, 1215
StyI CCWWGG 1 cut(s) 1070
TaaI ACNGT 5 cut(s) 195, 644, 666, 758, 882
TaiI ACGT 3 cut(s) 749, 934, 1350
TaqI TCGA 6 cut(s) 760, 1131, 1156, 1193, 1231, 1417
TauI GCSGC 2 cut(s) 1088, 1284
TfiI GAWTC 1 cut(s) 737
Tru1I TTAA 7 cut(s) 36, 48, 354, 675, 705, 824, 1316
Tru9I TTAA 7 cut(s) 36, 48, 354, 675, 705, 824, 1316
TscAI CASTG 7 cut(s) 12, 192, 262, 649, 696, 761, 1083
TseFI GTSAC 3 cut(s) 742, 854, 922
TseI GCWGC 5 cut(s) 43, 131, 148, 286, 1402
Tsp45I GTSAC 3 cut(s) 742, 854, 922
TspDTI ATGAA 4 cut(s) 313, 465, 563, 881
TspGWI ACGGA 2 cut(s) 74, 418
TspRI CASTG 7 cut(s) 12, 192, 262, 649, 696, 761, 1083
Tth111I GACNNNGTC 1 cut(s) 1127
Vha464I CTTAAG 3 cut(s) 35, 674, 1315
VneI GTGCAC 1 cut(s) 900
VpaK11BI GGWCC 1 cut(s) 1052
XapI RAATTY 2 cut(s) 770, 780
XceI RCATGY 2 cut(s) 127, 1028
XhoI CTCGAG 1 cut(s) 1416
XmiI GTMKAC 1 cut(s) 1131
XmnI GAANNNNTTC 3 cut(s) 665, 770, 1013
XspI CTAG 4 cut(s) 200, 447, 558, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.