MD03G1042300.v1.1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000070
Physical Location & Seq
Reverse (-)
3323230 .. 3324883
1654 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1042300.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGAGTAATCTAATTAGTCTGCCACATCTCCACATTTCCAAAATATGTTTGTTGGAAGGAATGCCTCCACATTTAGGTCGACTGGCAAATTTGCAATCCTTGCCGTATTTTGTGGTGGGTAAAGGTAGTGATCAGTCTGGGATAAGAGAGATAGGGTCCTTACTGCATCTTCGATGGACATTGTGCCTCTCAAGATTGGAGAACGTGAAGGATGGTGAGGATGCTAGCGGGGCCAATTTAATAGGCAAGGAAAGGCTTGATTCATTGGAGCTGAAATGGTCTTATTTGAGCGGATTGAGAGAAATGGAGTTGGGCGTGCTTGGCATGTTACAACCTCCTAAAATTCTCAAAGAGCTCACCATCAAGTGTTATGCTGGATTGAAATTTTCTTTGTGGATTGGAGATCCTCTGTTCTCTAACATGGTGCGTGTGAGCTTATACAATTGTTCTAATTATCATCTCTTGCCACCAGTTGGACAGTTGCCTTGCCTTAAAGAACTTTATATCACGGGAATGTTTGCAGTGGAAGTTGTTGGTCCCGAATTCTATGGAGAGGGTAGCTTTCCCTTTCGAGTATTAGAGATTCTCAAGTGTTCGGATATGAAGCACTGGGAGAAATGGCTGCCTTTCGATCAGGATATGAGTAGCGGTGTTTTCCCTAGCCTAAAATTTCTTTCAATCCAAATGTGCCCTAAACTGGGGGGTGAGTTGCCGAAGAAACTTAATTCGTTAACGACACTTGAGATTGTTAGATGCGAGGAATTGGTGGTTGCAATTGCCAACTATGAACAAGTGAGAGAATTAAAGATCTACGGTTGCAAAGCGCTGGTACATTCAACGACTGTGGTTGACTTGAAGTTATTAGAGACCTTGTGCCTCTCAAATATTTTGGAGCTGCGGTTGCAAGCAGGGGGATTTACAAAAGGATTAGGCAAGATTAAGGAGTTGACGATTCTCAGTTGTGAGCAGCTGACGGCTTCATTGAAAAATGAGGATAGATGTTTCCCTCACCTGATTTCTCAACTGTCGAAGGGGCTGCTTCAATTGTCATCTCTTCAGGAGCTTCACATACGGCATTGTTCACATCTAGTTTCTTTTCCAGATGTTGGCCTGCCACCTTCTCTTACAGTCTTGAAGATTACAGAATGCGACTCTCTGATGTATATTTCAAAATATCAAATTCCCCGAAATCTGAAAAGAATACATATATCGTGGTGTAGAAGTTCGAAATCATTAGTGGAGGAGGAGAAGGAGCTTGTTGGTTCTTCTTCGTCTTCTTTTTCTCTGAGCACTTGGAGATATCTGTTTGTCCATCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

440

Amino Acids

49.39

Weight (kDa)

8.1

Isoelectric Point (pI)

48.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_R13L1-DRL21 PF25019 48 - 172 4e-31 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 473, 1106
AccBSI CCGCTC 1 cut(s) 291
AccI GTMKAC 1 cut(s) 79
AciI CCGC 4 cut(s) 228, 291, 648, 898
AclWI GGATC 1 cut(s) 398
AcsI RAATTY 6 cut(s) 88, 342, 383, 542, 668, 1179
AcuI CTGAAG 1 cut(s) 1040
AfaI GTAC 1 cut(s) 831
AfeI AGCGCT 1 cut(s) 825
AfiI CCNNNNNNNGG 5 cut(s) 74, 473, 697, 698, 1106
AgsI TTSAA 8 cut(s) 382, 678, 837, 856, 985, 1043, 1135, 1170
AluBI AGCT 8 cut(s) 271, 355, 435, 561, 895, 970, 1063, 1255
AluI AGCT 8 cut(s) 271, 355, 435, 561, 895, 970, 1063, 1255
Alw21I GWGCWC 2 cut(s) 357, 1292
Alw26I GTCTC 1 cut(s) 860
AlwI GGATC 1 cut(s) 398
Aor51HI AGCGCT 1 cut(s) 825
AoxI GGCC 2 cut(s) 231, 1108
ApeKI GCWGC 4 cut(s) 622, 895, 967, 1036
ApoI RAATTY 6 cut(s) 88, 342, 383, 542, 668, 1179
AspLEI GCGC 1 cut(s) 826
AspS9I GGNCC 3 cut(s) 156, 231, 536
AsuHPI GGTGA 4 cut(s) 227, 349, 716, 1001
AsuII TTCGAA 1 cut(s) 1226
AsuNHI GCTAGC 1 cut(s) 224
AvaII GGWCC 2 cut(s) 156, 536
BaeGI GKGCMC 1 cut(s) 692
BanII GRGCYC 1 cut(s) 357
BbsI GAAGAC 1 cut(s) 1266
Bbv12I GWGCWC 2 cut(s) 357, 1292
BbvI GCAGC 4 cut(s) 609, 882, 979, 1023
BccI CCATC 3 cut(s) 168, 206, 368
BceAI ACGGC 3 cut(s) 88, 990, 1088
BcgI CGANNNNNNTGC 2 cut(s) 1018, 1052
BclI TGATCA 1 cut(s) 130
BcoDI GTCTC 1 cut(s) 860
BfaI CTAG 3 cut(s) 225, 660, 1088
BfoI RGCGCY 1 cut(s) 827
BglII AGATCT 1 cut(s) 807
BisI GCNGC 4 cut(s) 623, 896, 968, 1037
BlsI GCNGC 4 cut(s) 624, 897, 969, 1038
Bme18I GGWCC 2 cut(s) 156, 536
BmgT120I GGNCC 3 cut(s) 156, 231, 536
BmiI GGNNCC 3 cut(s) 157, 232, 538
BmrI ACTGGG 2 cut(s) 619, 707
BmsI GCATC 3 cut(s) 175, 211, 743
BmtI GCTAGC 1 cut(s) 228
BmuI ACTGGG 2 cut(s) 619, 707
BpiI GAAGAC 1 cut(s) 1266
Bpu14I TTCGAA 1 cut(s) 1226
BpuEI CTTGAG 3 cut(s) 175, 572, 761
BsaI GGTCTC 1 cut(s) 860
BsaXI ACNNNNNCTCC 2 cut(s) 884, 914
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 473, 697, 698, 1106
Bse1I ACTGG 4 cut(s) 87, 470, 614, 702
BseGI GGATG 2 cut(s) 217, 226
BseLI CCNNNNNNNGG 5 cut(s) 74, 473, 697, 698, 1106
BseMII CTCAG 2 cut(s) 970, 1277
BseNI ACTGG 4 cut(s) 87, 470, 614, 702
BseRI GAGGAG 2 cut(s) 1256, 1259
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 4 cut(s) 609, 882, 979, 1023
BshFI GGCC 2 cut(s) 233, 1110
BsiHKAI GWGCWC 2 cut(s) 357, 1292
BslFI GGGAC 1 cut(s) 522
BslI CCNNNNNNNGG 5 cut(s) 74, 473, 697, 698, 1106
BsmAI GTCTC 1 cut(s) 860
BsmFI GGGAC 1 cut(s) 522
BsmI GAATGC 2 cut(s) 66, 1151
BsnI GGCC 2 cut(s) 233, 1110
Bso31I GGTCTC 1 cut(s) 860
Bsp119I TTCGAA 1 cut(s) 1226
Bsp1286I GDGCHC 3 cut(s) 357, 692, 1292
Bsp143I GATC 4 cut(s) 130, 403, 631, 807
BspACI CCGC 4 cut(s) 228, 291, 648, 898
BspANI GGCC 2 cut(s) 233, 1110
BspCNI CTCAG 2 cut(s) 969, 1278
BspLI GGNNCC 3 cut(s) 157, 232, 538
BspOI GCTAGC 1 cut(s) 228
BspPI GGATC 1 cut(s) 398
BspT104I TTCGAA 1 cut(s) 1226
BspTNI GGTCTC 1 cut(s) 860
BsrBI CCGCTC 1 cut(s) 291
BsrI ACTGG 4 cut(s) 87, 470, 614, 702
BssMI GATC 4 cut(s) 130, 403, 631, 807
Bst4CI ACNGT 5 cut(s) 480, 815, 844, 1026, 1129
Bst6I CTCTTC 1 cut(s) 1059
BstAPI GCANNNNNTGC 1 cut(s) 100
BstBI TTCGAA 1 cut(s) 1226
BstC8I GCNNGC 4 cut(s) 226, 317, 906, 1112
BstDEI CTNAG 2 cut(s) 956, 1286
BstF5I GGATG 2 cut(s) 217, 226
BstH2I RGCGCY 1 cut(s) 827
BstHHI GCGC 1 cut(s) 826
BstKTI GATC 4 cut(s) 133, 406, 634, 810
BstMAI GTCTC 1 cut(s) 860
BstMBI GATC 4 cut(s) 130, 403, 631, 807
BstMWI GCNNNNNNNGC 4 cut(s) 100, 230, 321, 901
BstNSI RCATGY 1 cut(s) 328
BstSLI GKGCMC 1 cut(s) 692
BstV1I GCAGC 4 cut(s) 609, 882, 979, 1023
BstV2I GAAGAC 1 cut(s) 1266
BstX2I RGATCY 2 cut(s) 403, 807
BstYI RGATCY 2 cut(s) 403, 807
BsuRI GGCC 2 cut(s) 233, 1110
BtsCI GGATG 2 cut(s) 217, 226
BtsI GCAGTG 1 cut(s) 528
BtsIMutI CAGTG 2 cut(s) 528, 607
Cac8I GCNNGC 4 cut(s) 226, 317, 906, 1112
CfoI GCGC 1 cut(s) 826
Cfr13I GGNCC 3 cut(s) 156, 231, 536
Csp6I GTAC 1 cut(s) 830
CspCI CAANNNNNGTGG 2 cut(s) 825, 860
CviAII CATG 2 cut(s) 325, 421
CviQI GTAC 1 cut(s) 830
DdeI CTNAG 2 cut(s) 956, 1286
DpnI GATC 4 cut(s) 132, 405, 633, 809
DpnII GATC 4 cut(s) 130, 403, 631, 807
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
Ecl136II GAGCTC 1 cut(s) 355
Eco24I GRGCYC 1 cut(s) 357
Eco31I GGTCTC 1 cut(s) 860
Eco32I GATATC 1 cut(s) 1301
Eco47I GGWCC 2 cut(s) 156, 536
Eco47III AGCGCT 1 cut(s) 825
Eco53kI GAGCTC 1 cut(s) 355
Eco57I CTGAAG 1 cut(s) 1040
EcoICRI GAGCTC 1 cut(s) 355
EcoO109I RGGNCCY 1 cut(s) 156
EcoRI GAATTC 1 cut(s) 542
EcoRV GATATC 1 cut(s) 1301
EcoT38I GRGCYC 1 cut(s) 357
FaeI CATG 2 cut(s) 328, 424
FaqI GGGAC 1 cut(s) 522
FatI CATG 2 cut(s) 324, 420
FauI CCCGC 1 cut(s) 221
FbaI TGATCA 1 cut(s) 130
FblI GTMKAC 1 cut(s) 79
Fnu4HI GCNGC 4 cut(s) 623, 896, 968, 1037
FokI GGATG 2 cut(s) 224, 233
FriOI GRGCYC 1 cut(s) 357
Fsp4HI GCNGC 4 cut(s) 623, 896, 968, 1037
FspBI CTAG 3 cut(s) 225, 660, 1088
GlaI GCGC 1 cut(s) 825
GluI GCNGC 4 cut(s) 623, 896, 968, 1037
HaeII RGCGCY 1 cut(s) 827
HaeIII GGCC 2 cut(s) 233, 1110
HhaI GCGC 1 cut(s) 826
Hin1II CATG 2 cut(s) 328, 424
Hin6I GCGC 1 cut(s) 824
HinP1I GCGC 1 cut(s) 824
HincII GTYRAC 4 cut(s) 80, 732, 850, 948
HindII GTYRAC 4 cut(s) 80, 732, 850, 948
HinfI GANTC 4 cut(s) 260, 583, 952, 1151
HpaI GTTAAC 1 cut(s) 732
HphI GGTGA 4 cut(s) 227, 349, 716, 1001
Hpy166II GTNNAC 5 cut(s) 80, 732, 850, 948, 1082
Hpy188I TCNGA 5 cut(s) 598, 1158, 1194, 1287, 1319
Hpy188III TCNNGA 6 cut(s) 192, 539, 635, 1058, 1100, 1132
Hpy8I GTNNAC 5 cut(s) 80, 732, 850, 948, 1082
HpyAV CCTTC 5 cut(s) 50, 202, 1024, 1128, 1243
HpyCH4III ACNGT 5 cut(s) 480, 815, 844, 1026, 1129
HpyCH4IV ACGT 1 cut(s) 204
HpyCH4V TGCA 6 cut(s) 94, 166, 521, 773, 819, 904
HpyF10VI GCNNNNNNNGC 4 cut(s) 100, 230, 321, 901
HpyF3I CTNAG 2 cut(s) 956, 1286
HpySE526I ACGT 1 cut(s) 204
Hsp92II CATG 2 cut(s) 328, 424
HspAI GCGC 1 cut(s) 824
Ksp22I TGATCA 1 cut(s) 130
KspAI GTTAAC 1 cut(s) 732
Kzo9I GATC 4 cut(s) 130, 403, 631, 807
LmnI GCTCC 4 cut(s) 268, 892, 1060, 1252
Lsp1109I GCAGC 4 cut(s) 609, 882, 979, 1023
LweI GCATC 3 cut(s) 175, 211, 743
MaeI CTAG 3 cut(s) 225, 660, 1088
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 1 cut(s) 327
MalI GATC 4 cut(s) 132, 405, 633, 809
MbiI CCGCTC 1 cut(s) 291
MboI GATC 4 cut(s) 130, 403, 631, 807
MboII GAAGA 7 cut(s) 161, 727, 1046, 1147, 1257, 1260, 1266
MfeI CAATTG 3 cut(s) 442, 774, 1043
MflI RGATCY 2 cut(s) 403, 807
MhlI GDGCHC 3 cut(s) 357, 692, 1292
MlyI GAGTC 1 cut(s) 1145
MmeI TCCRAC 2 cut(s) 33, 454
MseI TTAA 6 cut(s) 239, 492, 723, 731, 803, 939
MslI CAYNNNNRTG 1 cut(s) 512
MspA1I CMGCKG 1 cut(s) 970
MunI CAATTG 3 cut(s) 442, 774, 1043
Mva1269I GAATGC 2 cut(s) 66, 1151
MwoI GCNNNNNNNGC 4 cut(s) 100, 230, 321, 901
NdeII GATC 4 cut(s) 130, 403, 631, 807
NheI GCTAGC 1 cut(s) 224
NlaIII CATG 2 cut(s) 328, 424
NlaIV GGNNCC 3 cut(s) 157, 232, 538
NspI RCATGY 1 cut(s) 328
NspV TTCGAA 1 cut(s) 1226
PctI GAATGC 2 cut(s) 66, 1151
PfeI GAWTC 3 cut(s) 260, 583, 952
PflMI CCANNNNNTGG 2 cut(s) 473, 1106
PkrI GCNGC 4 cut(s) 624, 897, 969, 1038
PleI GAGTC 1 cut(s) 1145
PpsI GAGTC 1 cut(s) 1145
PpuMI RGGWCCY 1 cut(s) 156
Psp124BI GAGCTC 1 cut(s) 357
Psp5II RGGWCCY 1 cut(s) 156
PspN4I GGNNCC 3 cut(s) 157, 232, 538
PspPI GGNCC 3 cut(s) 156, 231, 536
PspPPI RGGWCCY 1 cut(s) 156
PsuI RGATCY 2 cut(s) 403, 807
PvuII CAGCTG 1 cut(s) 970
RsaI GTAC 1 cut(s) 831
RsaNI GTAC 1 cut(s) 830
RseI CAYNNNNRTG 1 cut(s) 512
SacI GAGCTC 1 cut(s) 357
SalI GTCGAC 1 cut(s) 78
SaqAI TTAA 6 cut(s) 239, 492, 723, 731, 803, 939
SatI GCNGC 4 cut(s) 623, 896, 968, 1037
Sau3AI GATC 4 cut(s) 130, 403, 631, 807
Sau96I GGNCC 3 cut(s) 156, 231, 536
SchI GAGTC 1 cut(s) 1145
SduI GDGCHC 3 cut(s) 357, 692, 1292
SfaNI GCATC 3 cut(s) 175, 211, 743
SfuI TTCGAA 1 cut(s) 1226
SinI GGWCC 2 cut(s) 156, 536
SmiMI CAYNNNNRTG 1 cut(s) 512
SmlI CTYRAG 3 cut(s) 190, 587, 740
SmoI CTYRAG 3 cut(s) 190, 587, 740
SsiI CCGC 4 cut(s) 228, 291, 648, 898
SspI AATATT 1 cut(s) 886
SspMI CTAG 3 cut(s) 225, 660, 1088
SstI GAGCTC 1 cut(s) 357
TaaI ACNGT 5 cut(s) 480, 815, 844, 1026, 1129
TaiI ACGT 1 cut(s) 207
TaqI TCGA 6 cut(s) 79, 172, 571, 630, 1028, 1226
TfiI GAWTC 3 cut(s) 260, 583, 952
Tru1I TTAA 6 cut(s) 239, 492, 723, 731, 803, 939
Tru9I TTAA 6 cut(s) 239, 492, 723, 731, 803, 939
TscAI CASTG 2 cut(s) 528, 614
TseI GCWGC 4 cut(s) 622, 895, 967, 1036
TspDTI ATGAA 4 cut(s) 252, 617, 801, 969
TspRI CASTG 2 cut(s) 528, 614
Van91I CCANNNNNTGG 2 cut(s) 473, 1106
VpaK11BI GGWCC 2 cut(s) 156, 536
XapI RAATTY 6 cut(s) 88, 342, 383, 542, 668, 1179
XceI RCATGY 1 cut(s) 328
XmiI GTMKAC 1 cut(s) 79
XspI CTAG 3 cut(s) 225, 660, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.