RchiOBHm_Chr1g0321031

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000070
Physical Location & Seq
Reverse (-)
8486318 .. 8488151
1834 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55111

Sequence Viewer

Length: 1491 bp
ATGATGATGATGATGATGATGAAGAAGTCTCAACTCTCAAAAGGACAGGCGGTGACTTTTTCACACTATTATATGAATGTGAGCTCACCACTAACAACTGACCGGAAAAAAACAATTAAGTTTGAGTTCAATGGAAAGGTGTTGTTGGAGAGATTGACCTCTCGTGACTTCCTCAACTATGCACGGCAGAAAGGAGTTGCCAAAAAGCTTGAGAAATGGAGCGAGACGGTGTCTGAAATTGAGCAGCTTCTCAGTGATGCAGAGGAGAAGCAACTGATGATCAACGAGGCAATGCACCAGTGGTTGATTGAGCTCACGCATTTGGCCTATGATGTGGATGACATACTCGACAAGTTGTCCACTCAGATGCTGACAGGAATGGATGAAACTGGAGCTGGCTCAAGTAAGGTACGAAGCTTCATTCAAAAAGTTAAGTTGTACTTTAATAACTCTGAAATGGAGGGCATTACTCATCGATTACGGAAATTATCCACAAAACAAAAGGAGCTATTGAAGAATGTAAACTCAAACATTGAGACTACTTCCTTACCAGCATTGCAAAGGTCACCAAGTTCTATTGTGTTGAATACACCTGTGGCTGGAAGAGATGGGGAAATAAGAAAGATTGTTGGATTATTGTCAAGAGACTATGAGTCTTCTCGTACCACCAGTTTTCATTCAGTTGCCATTGTTGGTATGCCAGGAGTCGGCAAGACAACAGTTGCAGCACATGTCTTCATAGCTGATGCTATGGAACAGTTTTACCCAAAGGTGTTGGTATCTGTGTCTCATAACTTCAATCTTGAAACAGTGACGAGAGCTATTTGTAGGAAAGTCACATCCCAGCCAAGTGATCAGAATGATTTCAGTGAAGTGCAAGATGATTTCAACAGGGCAATAGCAGGTAAAAGATTTTTGATTGTTTTAGATGATGTCTGGAGCAGCACATGTGACTACGAGTCATGGACAACAATGCAGTCCCACTTCCGTGTTGGAGCACCAGGAAGTACAATACTCGTCACAACACGTGAAGAAAAAGTTGCAAAATTGATTGGAGCCACTGAAGTGTACAATTTGAAGGTTCTTTCAGATGAAGAGTGTCTGAATATATTTATGCAACATATTAACAATCACAGACCACCAAATTTTGATGCAGTATTTGCCAAGAAAATTGTTGAAAAATGCAATGGACTGCCATTGGCGGCAAAAACTCTTGGTGGTATTTTACGTTGTGAAGAAGTTGACAGATGGAATGAAGTATTGGATGACAAGTTGTGGAGTATATCAAATAACGAGAGTAACATACTCCCAGTTTTGAAGCTGAGTTATCATTATCTTCCTTCAACTTTAAAGAGGTGCTTTGCCTATTGCTCAATATTTCCCAATAACTATGAATTTGGGAAGAAGCAATTAATCCTTCTATGGATGGCAGAGGGTTTTCTTCAGCAGCCAGAAAGAAGTAACCAGATGGAAGATATTGGTGGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

496

Amino Acids

56.37

Weight (kDa)

7.61

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 47 - 127 3.1e-14 Rx N-terminal domain
AAA_16 PF13191 199 - 282 2.6e-06 AAA ATPase domain
NB-ARC PF00931 206 - 376 3e-29 NB-ARC domain
WHD_DRP PF23559 459 - 495 1.1e-10 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 893
AciI CCGC 2 cut(s) 50, 1202
AcsI RAATTY 2 cut(s) 1144, 1394
AcuI CTGAAG 2 cut(s) 1083, 1427
AcvI CACGTG 1 cut(s) 1028
AfaI GTAC 5 cut(s) 411, 440, 664, 1009, 1070
AfiI CCNNNNNNNGG 2 cut(s) 599, 707
AflIII ACRYGT 3 cut(s) 730, 947, 1025
AhdI GACNNNNNGTC 3 cut(s) 355, 652, 958
AjnI CCWGG 2 cut(s) 700, 1000
AjuI GAANNNNNNNTTGG 2 cut(s) 1244, 1276
AleI CACNNNNGTG 2 cut(s) 987, 1064
Alw21I GWGCWC 3 cut(s) 86, 315, 1000
Alw26I GTCTC 5 cut(s) 33, 218, 530, 639, 792
AlwNI CAGNNNCTG 1 cut(s) 370
AoxI GGCC 1 cut(s) 324
ApeKI GCWGC 4 cut(s) 244, 725, 942, 1447
ApoI RAATTY 2 cut(s) 1144, 1394
AseI ATTAAT 1 cut(s) 1412
Asp700I GAANNNNTTC 1 cut(s) 863
AsuHPI GGTGA 3 cut(s) 64, 78, 558
BanII GRGCYC 2 cut(s) 86, 315
BauI CACGAG 1 cut(s) 162
BbrPI CACGTG 1 cut(s) 1028
BbsI GAAGAC 2 cut(s) 648, 727
Bbv12I GWGCWC 3 cut(s) 86, 315, 1000
BbvI GCAGC 4 cut(s) 256, 737, 954, 1459
BccI CCATC 4 cut(s) 602, 1242, 1420, 1462
BceAI ACGGC 1 cut(s) 200
BciT130I CCWGG 2 cut(s) 702, 1002
BclI TGATCA 2 cut(s) 279, 853
BcoDI GTCTC 5 cut(s) 33, 218, 530, 639, 792
BfuAI ACCTGC 1 cut(s) 893
BisI GCNGC 5 cut(s) 245, 726, 943, 1203, 1448
BlsI GCNGC 5 cut(s) 246, 727, 944, 1204, 1449
Bme1390I CCNGG 2 cut(s) 702, 1002
BmeRI GACNNNNNGTC 3 cut(s) 355, 652, 958
BmiI GGNNCC 1 cut(s) 1057
BmrFI CCNGG 2 cut(s) 702, 1002
BmrI ACTGGG 1 cut(s) 1304
BmsI GCATC 4 cut(s) 247, 357, 736, 1141
BmuI ACTGGG 1 cut(s) 1304
BpiI GAAGAC 2 cut(s) 648, 727
BpmI CTGGAG 2 cut(s) 411, 958
BpuEI CTTGAG 2 cut(s) 230, 385
Bsa29I ATCGAT 1 cut(s) 475
BsaAI YACGTR 1 cut(s) 1028
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 2 cut(s) 599, 707
Bse1I ACTGG 4 cut(s) 298, 394, 669, 1310
Bse3DI GCAATG 3 cut(s) 297, 554, 1192
BseBI CCWGG 2 cut(s) 702, 1002
BseCI ATCGAT 1 cut(s) 475
BseGI GGATG 5 cut(s) 343, 388, 839, 1270, 1431
BseLI CCNNNNNNNGG 2 cut(s) 599, 707
BseMI GCAATG 3 cut(s) 297, 554, 1192
BseMII CTCAG 3 cut(s) 265, 377, 1313
BseNI ACTGG 4 cut(s) 298, 394, 669, 1310
BseRI GAGGAG 1 cut(s) 278
BseXI GCAGC 4 cut(s) 256, 737, 954, 1459
BseYI CCCAGC 1 cut(s) 843
BshFI GGCC 1 cut(s) 326
BshVI ATCGAT 1 cut(s) 475
BsiHKAI GWGCWC 3 cut(s) 86, 315, 1000
BsiSI CCGG 1 cut(s) 103
BslFI GGGAC 1 cut(s) 964
BslI CCNNNNNNNGG 2 cut(s) 599, 707
BsmAI GTCTC 5 cut(s) 33, 218, 530, 639, 792
BsmBI CGTCTC 1 cut(s) 218
BsmFI GGGAC 1 cut(s) 964
BsnI GGCC 1 cut(s) 326
Bsp1286I GDGCHC 3 cut(s) 86, 315, 1000
Bsp1407I TGTACA 1 cut(s) 1068
Bsp143I GATC 2 cut(s) 279, 853
BspACI CCGC 2 cut(s) 50, 1202
BspANI GGCC 1 cut(s) 326
BspCNI CTCAG 3 cut(s) 264, 376, 1314
BspDI ATCGAT 1 cut(s) 475
BspLI GGNNCC 1 cut(s) 1057
BspMI ACCTGC 1 cut(s) 893
BsrDI GCAATG 3 cut(s) 297, 554, 1192
BsrGI TGTACA 1 cut(s) 1068
BsrI ACTGG 4 cut(s) 298, 394, 669, 1310
BssMI GATC 2 cut(s) 279, 853
BssSI CACGAG 1 cut(s) 162
Bst2BI CACGAG 1 cut(s) 162
Bst2UI CCWGG 2 cut(s) 702, 1002
Bst4CI ACNGT 4 cut(s) 229, 721, 759, 811
Bst6I CTCTTC 2 cut(s) 598, 1089
BstAPI GCANNNNNTGC 1 cut(s) 1160
BstAUI TGTACA 1 cut(s) 1068
BstBAI YACGTR 1 cut(s) 1028
BstC8I GCNNGC 1 cut(s) 397
BstDEI CTNAG 3 cut(s) 251, 363, 1322
BstEII GGTNACC 1 cut(s) 564
BstF5I GGATG 5 cut(s) 343, 388, 839, 1270, 1431
BstKTI GATC 2 cut(s) 282, 856
BstMAI GTCTC 5 cut(s) 33, 218, 530, 639, 792
BstMBI GATC 2 cut(s) 279, 853
BstMWI GCNNNNNNNGC 1 cut(s) 1160
BstNI CCWGG 2 cut(s) 702, 1002
BstNSI RCATGY 2 cut(s) 734, 951
BstPI GGTNACC 1 cut(s) 564
BstSCI CCNGG 2 cut(s) 700, 1000
BstV1I GCAGC 4 cut(s) 256, 737, 954, 1459
BstV2I GAAGAC 2 cut(s) 648, 727
Bsu15I ATCGAT 1 cut(s) 475
BsuRI GGCC 1 cut(s) 326
BsuTUI ATCGAT 1 cut(s) 475
BtsCI GGATG 5 cut(s) 343, 388, 839, 1270, 1431
BtsIMutI CAGTG 5 cut(s) 259, 305, 816, 874, 1059
BveI ACCTGC 1 cut(s) 893
Cac8I GCNNGC 1 cut(s) 397
CaiI CAGNNNCTG 1 cut(s) 370
ClaI ATCGAT 1 cut(s) 475
Csp6I GTAC 5 cut(s) 410, 439, 663, 1008, 1069
CviAII CATG 3 cut(s) 731, 948, 963
CviQI GTAC 5 cut(s) 410, 439, 663, 1008, 1069
DdeI CTNAG 3 cut(s) 251, 363, 1322
DpnI GATC 2 cut(s) 281, 855
DpnII GATC 2 cut(s) 279, 853
DraI TTTAAA 1 cut(s) 1350
DriI GACNNNNNGTC 3 cut(s) 355, 652, 958
Eam1104I CTCTTC 2 cut(s) 598, 1089
Eam1105I GACNNNNNGTC 3 cut(s) 355, 652, 958
EarI CTCTTC 2 cut(s) 598, 1089
Ecl136II GAGCTC 2 cut(s) 84, 313
Eco24I GRGCYC 2 cut(s) 86, 315
Eco53kI GAGCTC 2 cut(s) 84, 313
Eco57I CTGAAG 2 cut(s) 1083, 1427
Eco72I CACGTG 1 cut(s) 1028
Eco91I GGTNACC 1 cut(s) 564
EcoICRI GAGCTC 2 cut(s) 84, 313
EcoO65I GGTNACC 1 cut(s) 564
EcoRII CCWGG 2 cut(s) 700, 1000
EcoT38I GRGCYC 2 cut(s) 86, 315
Esp3I CGTCTC 1 cut(s) 218
FaeI CATG 3 cut(s) 734, 951, 966
FalI AAGNNNNNCTT 4 cut(s) 425, 457, 1343, 1375
FaqI GGGAC 1 cut(s) 964
FatI CATG 3 cut(s) 730, 947, 962
FbaI TGATCA 2 cut(s) 279, 853
Fnu4HI GCNGC 5 cut(s) 245, 726, 943, 1203, 1448
FokI GGATG 5 cut(s) 350, 395, 826, 1277, 1438
FriOI GRGCYC 2 cut(s) 86, 315
Fsp4HI GCNGC 5 cut(s) 245, 726, 943, 1203, 1448
GluI GCNGC 5 cut(s) 245, 726, 943, 1203, 1448
GsaI CCCAGC 1 cut(s) 847
GsuI CTGGAG 2 cut(s) 411, 958
HaeIII GGCC 1 cut(s) 326
HapII CCGG 1 cut(s) 103
Hin1II CATG 3 cut(s) 734, 951, 966
HincII GTYRAC 1 cut(s) 1243
HindII GTYRAC 1 cut(s) 1243
HindIII AAGCTT 2 cut(s) 206, 415
HinfI GANTC 3 cut(s) 653, 705, 959
HpaII CCGG 1 cut(s) 103
HphI GGTGA 3 cut(s) 64, 78, 558
Hpy166II GTNNAC 4 cut(s) 360, 523, 1069, 1243
Hpy188I TCNGA 6 cut(s) 235, 366, 454, 858, 1090, 1104
Hpy188III TCNNGA 4 cut(s) 164, 642, 803, 937
Hpy8I GTNNAC 4 cut(s) 360, 523, 1069, 1243
HpyAV CCTTC 3 cut(s) 1072, 1350, 1427
HpyCH4III ACNGT 4 cut(s) 229, 721, 759, 811
HpyCH4IV ACGT 2 cut(s) 1027, 1228
HpyF10VI GCNNNNNNNGC 1 cut(s) 1160
HpyF3I CTNAG 3 cut(s) 251, 363, 1322
HpySE526I ACGT 2 cut(s) 1027, 1228
Hsp92II CATG 3 cut(s) 734, 951, 966
Ksp22I TGATCA 2 cut(s) 279, 853
Kzo9I GATC 2 cut(s) 279, 853
LmnI GCTCC 6 cut(s) 219, 392, 505, 939, 995, 1055
Lsp1109I GCAGC 4 cut(s) 256, 737, 954, 1459
LweI GCATC 4 cut(s) 247, 357, 736, 1141
MaeII ACGT 2 cut(s) 1027, 1228
MaeIII GTNAC 9 cut(s) 52, 164, 564, 811, 835, 950, 1018, 1298, 1460
MalI GATC 2 cut(s) 281, 855
MboI GATC 2 cut(s) 279, 853
MhlI GDGCHC 3 cut(s) 86, 315, 1000
MluCI AATT 9 cut(s) 114, 237, 485, 1046, 1072, 1144, 1170, 1394, 1409
MlyI GAGTC 3 cut(s) 662, 714, 968
MmeI TCCRAC 3 cut(s) 126, 610, 973
MnlI CCTC 7 cut(s) 169, 182, 256, 280, 454, 1347, 1426
MroXI GAANNNNTTC 1 cut(s) 863
MseI TTAA 6 cut(s) 117, 432, 444, 1125, 1349, 1412
MslI CAYNNNNRTG 3 cut(s) 365, 987, 1064
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 2 cut(s) 702, 1002
MvaI CCWGG 2 cut(s) 702, 1002
MwoI GCNNNNNNNGC 1 cut(s) 1160
NdeII GATC 2 cut(s) 279, 853
NlaIII CATG 3 cut(s) 734, 951, 966
NlaIV GGNNCC 1 cut(s) 1057
NmuCI GTSAC 7 cut(s) 52, 164, 564, 811, 835, 950, 1018
NspI RCATGY 2 cut(s) 734, 951
OliI CACNNNNGTG 2 cut(s) 987, 1064
PciI ACATGT 2 cut(s) 730, 947
PdmI GAANNNNTTC 1 cut(s) 863
PflFI GACNNNGTC 1 cut(s) 229
PkrI GCNGC 5 cut(s) 246, 727, 944, 1204, 1449
PleI GAGTC 3 cut(s) 661, 713, 967
PmaCI CACGTG 1 cut(s) 1028
PmlI CACGTG 1 cut(s) 1028
PpsI GAGTC 3 cut(s) 661, 713, 967
Ppu21I YACGTR 1 cut(s) 1028
PscI ACATGT 2 cut(s) 730, 947
PshBI ATTAAT 1 cut(s) 1412
Psp124BI GAGCTC 2 cut(s) 86, 315
Psp6I CCWGG 2 cut(s) 700, 1000
PspCI CACGTG 1 cut(s) 1028
PspEI GGTNACC 1 cut(s) 564
PspFI CCCAGC 1 cut(s) 843
PspGI CCWGG 2 cut(s) 700, 1000
PspN4I GGNNCC 1 cut(s) 1057
PstNI CAGNNNCTG 1 cut(s) 370
PsyI GACNNNGTC 1 cut(s) 229
RsaI GTAC 5 cut(s) 411, 440, 664, 1009, 1070
RsaNI GTAC 5 cut(s) 410, 439, 663, 1008, 1069
RseI CAYNNNNRTG 3 cut(s) 365, 987, 1064
SacI GAGCTC 2 cut(s) 86, 315
SaqAI TTAA 6 cut(s) 117, 432, 444, 1125, 1349, 1412
SatI GCNGC 5 cut(s) 245, 726, 943, 1203, 1448
Sau3AI GATC 2 cut(s) 279, 853
SchI GAGTC 3 cut(s) 662, 714, 968
ScrFI CCNGG 2 cut(s) 702, 1002
SduI GDGCHC 3 cut(s) 86, 315, 1000
SfaNI GCATC 4 cut(s) 247, 357, 736, 1141
SmiMI CAYNNNNRTG 3 cut(s) 365, 987, 1064
SmlI CTYRAG 2 cut(s) 209, 400
SmoI CTYRAG 2 cut(s) 209, 400
Sse9I AATT 9 cut(s) 114, 237, 485, 1046, 1072, 1144, 1170, 1394, 1409
SsiI CCGC 2 cut(s) 50, 1202
SspI AATATT 1 cut(s) 1377
SstI GAGCTC 2 cut(s) 86, 315
StyD4I CCNGG 2 cut(s) 700, 1000
TaaI ACNGT 4 cut(s) 229, 721, 759, 811
TaiI ACGT 2 cut(s) 1030, 1231
TaqI TCGA 2 cut(s) 348, 475
TasI AATT 9 cut(s) 114, 237, 485, 1046, 1072, 1144, 1170, 1394, 1409
TatI WGTACW 3 cut(s) 438, 1007, 1068
TauI GCSGC 1 cut(s) 1205
Tru1I TTAA 6 cut(s) 117, 432, 444, 1125, 1349, 1412
Tru9I TTAA 6 cut(s) 117, 432, 444, 1125, 1349, 1412
TscAI CASTG 5 cut(s) 259, 305, 816, 874, 1066
TseFI GTSAC 7 cut(s) 52, 164, 564, 811, 835, 950, 1018
TseI GCWGC 4 cut(s) 244, 725, 942, 1447
Tsp45I GTSAC 7 cut(s) 52, 164, 564, 811, 835, 950, 1018
TspDTI ATGAA 9 cut(s) 35, 89, 399, 409, 665, 727, 1107, 1269, 1407
TspGWI ACGGA 2 cut(s) 496, 977
TspRI CASTG 5 cut(s) 259, 305, 816, 874, 1066
Tth111I GACNNNGTC 1 cut(s) 229
VspI ATTAAT 1 cut(s) 1412
XapI RAATTY 2 cut(s) 1144, 1394
XceI RCATGY 2 cut(s) 734, 951
XcmI CCANNNNNNNNNTGG 1 cut(s) 989
XmnI GAANNNNTTC 1 cut(s) 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.