Rw1G035170

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
62999402 .. 63001176
1775 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G035170.1

Sequence Viewer

Length: 1476 bp
ATGGATGCAGTGGAAAGTGTTGGTATTGAGTTTTATGGAGAAGGTAACTTGCCGTTTCAAGCTTTAGAGACCCTTGAGTTTGAGAATCTGAAAAATTGGAAGAAATGGTCTGCTTGCCAACAAAATGAGGGGGTTGGGGTTTTCTCTTGCCTGAAAGAGCTTTCCATCAGTGACTGCCCCAAATTGGAAGGTAGTTTACCGGAGAAGCTTGATTCATTAGAGCAGCTTCAGATATCTGGATGTGAGGAATTGGTGGTTTCAATATCCAATTATAAACAGCTTCATGAATCATACATCAACAATTGCAAGATGGTGGTTTACGACACAGGTCCAGTTCTCTTGGACTTACTAGAGAGGTTGACATTTTCAAATGTTTCAGAGCTGAGACTCGAAAGAGAGGCGTTCATGAAAAGCTTGAAAAATGTTAAAGAGTTGAAGATTACTGGTTGTGAGGAGCTGACATGTTCCTTTCAGAATGAGGATAGATTACTGCAACATTTGATTTCTCTTAGTCGTTTGTGTATTAAAGACAACTCTGCCCTTGTTGAAAAGCTAGGGAAAGAAGCAGAGCAGTTGTGTGCAAGCCTTTTGAAGGTACCAGAAGGATTGCATCAACTTACATCTCTTGAAGAGCTTCACATAAATGGATGTTCAAGTCTTGTTTCTTTCTCAGATGTTGGTCTGCTACCTTGTCTTCAAGTCATAGAGATTTGGAAGTGCGATTCTCTGTTGCACTTTGCAAAATACCAGATTCCTCCAAGCCTAAAAAGAATAGAGATTCGGGAATGTGAGAAATTGAAATCATTGATAGAGAAAGAGGAGGTGCTTCGGATAGAGAATTGTAGACAGCTGGAGTTAATAACTGAGAGGTTCCTCGATGACACCTGTCAACTCGAAAGTATTCGCATCTGGGACTGCCCAAACCTTAAATCCGTACTTGAGGGACTGTGCCACCTCACCAATCTTCAGTCATTAGTTATTTGGGGTTGTCAAAGTCTGGTTTCGTTGCCGAGAATGAGTGTGTGGCCAAGAGCTACGACTATCAGCGATTGTGAGAAATTGGAGATCAAGAATTGTAAGGCGCTGATGGAATCTCAAGGGCTGCACAGACTTGCCTCTTTGAGAGAATTGCAGATCTACGGTGATGAAGATGATCGAGGTTTGGCGTCCTTTCCACCTGGTGAGAATTCGAAGGAGAAGGAGATGCTGTTCCCCAGATTTCTTGTTCAATTGACAATAGAAGACTTCCCAAATCTAAAGAAACTGAGCAAGGGCTTTCAATTCCTCACCTCTCTTGAGCATCTTTACATCTACAAATGTCCGAAGCTTACAACCATTCCAGAGGAGGGCCTGCCTCTTTCACTTACTCAACTTCATATTTCTGGGTGTCCTCTACTTGAAGAGAGATGCAAAGGACGATACCGGCCCAAGATAGCACACATCCCTTGCGTACGAATTAGGGGCTCCTCGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

491

Amino Acids

55.92

Weight (kDa)

5.4

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 231 - 360 4e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_R13L1-DRL21 PF25019 263 - 380 9.1e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 273
Acc65I GGTACC 1 cut(s) 595
AccB1I GGYRCC 1 cut(s) 595
AccI GTMKAC 1 cut(s) 844
AcoI YGGCCR 1 cut(s) 1025
AcsI RAATTY 1 cut(s) 1186
AcuI CTGAAG 2 cut(s) 212, 950
AcyI GRCGYC 1 cut(s) 1166
AdeI CACNNNGTG 1 cut(s) 1181
AfaI GTAC 3 cut(s) 597, 936, 1452
AfiI CCNNNNNNNGG 3 cut(s) 184, 592, 1346
AflIII ACRYGT 1 cut(s) 461
AjnI CCWGG 1 cut(s) 1177
AloI GAACNNNNNNTCC 2 cut(s) 1193, 1225
Alw26I GTCTC 2 cut(s) 62, 379
AlwNI CAGNNNCTG 1 cut(s) 174
AoxI GGCC 3 cut(s) 1025, 1348, 1424
ApeKI GCWGC 2 cut(s) 223, 1102
ApoI RAATTY 1 cut(s) 1186
Asp700I GAANNNNTTC 2 cut(s) 633, 900
Asp718I GGTACC 1 cut(s) 595
AspLEI GCGC 1 cut(s) 1084
AspS9I GGNCC 3 cut(s) 329, 1348, 1425
AsuHPI GGTGA 4 cut(s) 949, 1154, 1193, 1279
AsuII TTCGAA 1 cut(s) 1190
AvaII GGWCC 1 cut(s) 329
BalI TGGCCA 1 cut(s) 1027
BanI GGYRCC 1 cut(s) 595
BanII GRGCYC 1 cut(s) 1466
BarI GAAGNNNNNNTAC 2 cut(s) 180, 212
BbsI GAAGAC 2 cut(s) 686, 1248
BbvI GCAGC 2 cut(s) 235, 1089
BccI CCATC 3 cut(s) 173, 304, 1081
BceAI ACGGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 1179
BcoDI GTCTC 2 cut(s) 62, 379
BfaI CTAG 3 cut(s) 350, 554, 1474
BfoI RGCGCY 1 cut(s) 1085
BglII AGATCT 1 cut(s) 1134
BisI GCNGC 2 cut(s) 224, 1103
BlsI GCNGC 2 cut(s) 225, 1104
Bme1390I CCNGG 1 cut(s) 1179
Bme18I GGWCC 1 cut(s) 329
BmgT120I GGNCC 3 cut(s) 329, 1348, 1425
BmiI GGNNCC 3 cut(s) 597, 872, 1465
BmrFI CCNGG 1 cut(s) 1179
BmsI GCATC 5 cut(s) 619, 915, 1194, 1309, 1397
BoxI GACNNNNGTC 2 cut(s) 327, 885
BpiI GAAGAC 2 cut(s) 686, 1248
BpmI CTGGAG 1 cut(s) 872
Bpu14I TTCGAA 1 cut(s) 1190
BpuEI CTTGAG 4 cut(s) 95, 959, 1080, 1316
BsaHI GRCGYC 1 cut(s) 1166
BsaI GGTCTC 1 cut(s) 62
BsaWI WCCGGW 1 cut(s) 199
BsaXI ACNNNNNCTCC 2 cut(s) 1193, 1223
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 592, 1346
Bse118I RCCGGY 1 cut(s) 1422
Bse1I ACTGG 2 cut(s) 332, 448
BseBI CCWGG 1 cut(s) 1179
BseGI GGATG 4 cut(s) 10, 245, 653, 1440
BseLI CCNNNNNNNGG 3 cut(s) 184, 592, 1346
BseMII CTCAG 4 cut(s) 374, 684, 855, 1256
BseNI ACTGG 2 cut(s) 332, 448
BseRI GAGGAG 4 cut(s) 467, 833, 1358, 1456
BseXI GCAGC 2 cut(s) 235, 1089
BsgI GTGCAG 1 cut(s) 1088
BshFI GGCC 3 cut(s) 1027, 1350, 1426
BshNI GGYRCC 1 cut(s) 595
BsiSI CCGG 2 cut(s) 200, 1423
BsiWI CGTACG 1 cut(s) 1450
BslFI GGGAC 2 cut(s) 926, 957
BslI CCNNNNNNNGG 3 cut(s) 184, 592, 1346
BsmAI GTCTC 2 cut(s) 62, 379
BsmFI GGGAC 2 cut(s) 926, 957
BsnI GGCC 3 cut(s) 1027, 1350, 1426
Bso31I GGTCTC 1 cut(s) 62
Bsp119I TTCGAA 1 cut(s) 1190
Bsp1286I GDGCHC 1 cut(s) 1466
Bsp143I GATC 4 cut(s) 1065, 1134, 1153, 1470
BspANI GGCC 3 cut(s) 1027, 1350, 1426
BspCNI CTCAG 4 cut(s) 375, 683, 856, 1257
BspHI TCATGA 2 cut(s) 283, 405
BspLI GGNNCC 3 cut(s) 597, 872, 1465
BspQI GCTCTTC 1 cut(s) 624
BspT104I TTCGAA 1 cut(s) 1190
BspT107I GGYRCC 1 cut(s) 595
BspTNI GGTCTC 1 cut(s) 62
BsrFI RCCGGY 1 cut(s) 1422
BsrI ACTGG 2 cut(s) 332, 448
BssAI RCCGGY 1 cut(s) 1422
BssMI GATC 4 cut(s) 1065, 1134, 1153, 1470
BssNI GRCGYC 1 cut(s) 1166
Bst2UI CCWGG 1 cut(s) 1179
Bst4CI ACNGT 2 cut(s) 948, 1142
Bst6I CTCTTC 2 cut(s) 624, 1395
BstACI GRCGYC 1 cut(s) 1166
BstBI TTCGAA 1 cut(s) 1190
BstC8I GCNNGC 3 cut(s) 115, 583, 1352
BstDEI CTNAG 5 cut(s) 383, 509, 670, 864, 1265
BstENI CCTNNNNNAGG 1 cut(s) 590
BstF5I GGATG 4 cut(s) 10, 245, 653, 1440
BstH2I RGCGCY 1 cut(s) 1085
BstHHI GCGC 1 cut(s) 1084
BstKTI GATC 4 cut(s) 1068, 1137, 1156, 1473
BstMAI GTCTC 2 cut(s) 62, 379
BstMBI GATC 4 cut(s) 1065, 1134, 1153, 1470
BstNI CCWGG 1 cut(s) 1179
BstNSI RCATGY 1 cut(s) 465
BstPAI GACNNNNGTC 2 cut(s) 327, 885
BstSCI CCNGG 1 cut(s) 1177
BstV1I GCAGC 2 cut(s) 235, 1089
BstV2I GAAGAC 2 cut(s) 686, 1248
BstX2I RGATCY 1 cut(s) 1134
BstYI RGATCY 1 cut(s) 1134
BsuRI GGCC 3 cut(s) 1027, 1350, 1426
BtsCI GGATG 4 cut(s) 10, 245, 653, 1440
BtsI GCAGTG 1 cut(s) 15
BtsIMutI CAGTG 2 cut(s) 15, 175
Cac8I GCNNGC 3 cut(s) 115, 583, 1352
CaiI CAGNNNCTG 1 cut(s) 174
CciI TCATGA 2 cut(s) 283, 405
CfoI GCGC 1 cut(s) 1084
Cfr10I RCCGGY 1 cut(s) 1422
Cfr13I GGNCC 3 cut(s) 329, 1348, 1425
CseI GACGC 1 cut(s) 1155
CsiI ACCWGGT 1 cut(s) 1177
Csp6I GTAC 3 cut(s) 596, 935, 1451
CviAII CATG 3 cut(s) 284, 406, 462
CviQI GTAC 3 cut(s) 596, 935, 1451
DdeI CTNAG 5 cut(s) 383, 509, 670, 864, 1265
DpnI GATC 4 cut(s) 1067, 1136, 1155, 1472
DpnII GATC 4 cut(s) 1065, 1134, 1153, 1470
DraIII CACNNNGTG 1 cut(s) 1181
EaeI YGGCCR 1 cut(s) 1025
Eam1104I CTCTTC 2 cut(s) 624, 1395
EarI CTCTTC 2 cut(s) 624, 1395
Eco24I GRGCYC 1 cut(s) 1466
Eco31I GGTCTC 1 cut(s) 62
Eco32I GATATC 1 cut(s) 234
Eco47I GGWCC 1 cut(s) 329
Eco57I CTGAAG 2 cut(s) 212, 950
EcoNI CCTNNNNNAGG 1 cut(s) 590
EcoO109I RGGNCCY 1 cut(s) 1348
EcoRI GAATTC 1 cut(s) 1186
EcoRII CCWGG 1 cut(s) 1177
EcoRV GATATC 1 cut(s) 234
EcoT38I GRGCYC 1 cut(s) 1466
FaeI CATG 3 cut(s) 287, 409, 465
FaiI YATR 9 cut(s) 36, 273, 285, 292, 407, 463, 641, 704, 1377
FaqI GGGAC 2 cut(s) 926, 957
FatI CATG 3 cut(s) 283, 405, 461
FblI GTMKAC 1 cut(s) 844
Fnu4HI GCNGC 2 cut(s) 224, 1103
FokI GGATG 4 cut(s) 17, 252, 660, 1427
FriOI GRGCYC 1 cut(s) 1466
Fsp4HI GCNGC 2 cut(s) 224, 1103
FspBI CTAG 3 cut(s) 350, 554, 1474
GlaI GCGC 1 cut(s) 1083
GluI GCNGC 2 cut(s) 224, 1103
GsuI CTGGAG 1 cut(s) 872
HaeII RGCGCY 1 cut(s) 1085
HaeIII GGCC 3 cut(s) 1027, 1350, 1426
HapII CCGG 2 cut(s) 200, 1423
HgaI GACGC 1 cut(s) 1155
HhaI GCGC 1 cut(s) 1084
Hin1I GRCGYC 1 cut(s) 1166
Hin1II CATG 3 cut(s) 287, 409, 465
Hin6I GCGC 1 cut(s) 1082
HinP1I GCGC 1 cut(s) 1082
HincII GTYRAC 2 cut(s) 360, 890
HindII GTYRAC 2 cut(s) 360, 890
HindIII AAGCTT 4 cut(s) 60, 206, 412, 1325
HinfI GANTC 8 cut(s) 85, 212, 287, 387, 722, 751, 778, 1091
HpaII CCGG 2 cut(s) 200, 1423
HphI GGTGA 4 cut(s) 949, 1154, 1193, 1279
Hpy166II GTNNAC 5 cut(s) 197, 319, 360, 845, 890
Hpy188I TCNGA 7 cut(s) 90, 231, 379, 474, 673, 831, 1323
Hpy188III TCNNGA 8 cut(s) 237, 284, 406, 626, 782, 1069, 1295, 1340
Hpy8I GTNNAC 5 cut(s) 197, 319, 360, 845, 890
HpyAV CCTTC 6 cut(s) 35, 182, 586, 596, 1186, 1192
HpyCH4III ACNGT 2 cut(s) 948, 1142
HpyF3I CTNAG 5 cut(s) 383, 509, 670, 864, 1265
Hsp92I GRCGYC 1 cut(s) 1166
Hsp92II CATG 3 cut(s) 287, 409, 465
HspAI GCGC 1 cut(s) 1082
KpnI GGTACC 1 cut(s) 599
Kzo9I GATC 4 cut(s) 1065, 1134, 1153, 1470
LguI GCTCTTC 1 cut(s) 624
LmnI GCTCC 2 cut(s) 454, 1469
Lsp1109I GCAGC 2 cut(s) 235, 1089
LweI GCATC 5 cut(s) 619, 915, 1194, 1309, 1397
MabI ACCWGGT 1 cut(s) 1177
MaeI CTAG 3 cut(s) 350, 554, 1474
MaeIII GTNAC 2 cut(s) 44, 170
MalI GATC 4 cut(s) 1067, 1136, 1155, 1472
MboI GATC 4 cut(s) 1065, 1134, 1153, 1470
MboII GAAGA 8 cut(s) 112, 448, 641, 686, 956, 1160, 1253, 1412
MfeI CAATTG 2 cut(s) 301, 1229
MflI RGATCY 1 cut(s) 1134
MhlI GDGCHC 1 cut(s) 1466
MlsI TGGCCA 1 cut(s) 1027
MluNI TGGCCA 1 cut(s) 1027
MlyI GAGTC 1 cut(s) 381
Mox20I TGGCCA 1 cut(s) 1027
MroXI GAANNNNTTC 2 cut(s) 633, 900
MscI TGGCCA 1 cut(s) 1027
MseI TTAA 4 cut(s) 426, 525, 857, 927
MslI CAYNNNNRTG 1 cut(s) 642
Msp20I TGGCCA 1 cut(s) 1027
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 2 cut(s) 200, 1423
MspR9I CCNGG 1 cut(s) 1179
MunI CAATTG 2 cut(s) 301, 1229
MvaI CCWGG 1 cut(s) 1179
NdeII GATC 4 cut(s) 1065, 1134, 1153, 1470
NlaIII CATG 3 cut(s) 287, 409, 465
NlaIV GGNNCC 3 cut(s) 597, 872, 1465
NmeAIII GCCGAG 1 cut(s) 1035
NmuCI GTSAC 1 cut(s) 170
NspI RCATGY 1 cut(s) 465
NspV TTCGAA 1 cut(s) 1190
PagI TCATGA 2 cut(s) 283, 405
PciI ACATGT 1 cut(s) 461
PciSI GCTCTTC 1 cut(s) 624
PdmI GAANNNNTTC 2 cut(s) 633, 900
PfeI GAWTC 7 cut(s) 85, 212, 287, 722, 751, 778, 1091
Pfl23II CGTACG 1 cut(s) 1450
PkrI GCNGC 2 cut(s) 225, 1104
PleI GAGTC 1 cut(s) 381
PpsI GAGTC 1 cut(s) 381
PscI ACATGT 1 cut(s) 461
PshAI GACNNNNGTC 2 cut(s) 327, 885
PsiI TTATAA 1 cut(s) 273
Psp6I CCWGG 1 cut(s) 1177
PspGI CCWGG 1 cut(s) 1177
PspLI CGTACG 1 cut(s) 1450
PspN4I GGNNCC 3 cut(s) 597, 872, 1465
PspPI GGNCC 3 cut(s) 329, 1348, 1425
PstNI CAGNNNCTG 1 cut(s) 174
PsuI RGATCY 1 cut(s) 1134
PvuII CAGCTG 1 cut(s) 850
RsaI GTAC 3 cut(s) 597, 936, 1452
RsaNI GTAC 3 cut(s) 596, 935, 1451
RseI CAYNNNNRTG 1 cut(s) 642
SapI GCTCTTC 1 cut(s) 624
SaqAI TTAA 4 cut(s) 426, 525, 857, 927
SatI GCNGC 2 cut(s) 224, 1103
Sau3AI GATC 4 cut(s) 1065, 1134, 1153, 1470
Sau96I GGNCC 3 cut(s) 329, 1348, 1425
SchI GAGTC 1 cut(s) 381
ScrFI CCNGG 1 cut(s) 1179
SduI GDGCHC 1 cut(s) 1466
SexAI ACCWGGT 1 cut(s) 1177
SfaNI GCATC 5 cut(s) 619, 915, 1194, 1309, 1397
SfuI TTCGAA 1 cut(s) 1190
SinI GGWCC 1 cut(s) 329
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 4 cut(s) 74, 938, 1095, 1295
SmoI CTYRAG 4 cut(s) 74, 938, 1095, 1295
SspMI CTAG 3 cut(s) 350, 554, 1474
StyD4I CCNGG 1 cut(s) 1177
TaaI ACNGT 2 cut(s) 948, 1142
TaqI TCGA 6 cut(s) 390, 876, 894, 1156, 1190, 1469
TfiI GAWTC 7 cut(s) 85, 212, 287, 722, 751, 778, 1091
Tru1I TTAA 4 cut(s) 426, 525, 857, 927
Tru9I TTAA 4 cut(s) 426, 525, 857, 927
TscAI CASTG 2 cut(s) 15, 175
TseFI GTSAC 1 cut(s) 170
TseI GCWGC 2 cut(s) 223, 1102
Tsp45I GTSAC 1 cut(s) 170
TspDTI ATGAA 7 cut(s) 204, 272, 300, 394, 422, 1161, 1364
TspGWI ACGGA 1 cut(s) 922
TspRI CASTG 2 cut(s) 15, 175
VpaK11BI GGWCC 1 cut(s) 329
XagI CCTNNNNNAGG 1 cut(s) 590
XapI RAATTY 1 cut(s) 1186
XceI RCATGY 1 cut(s) 465
XmiI GTMKAC 1 cut(s) 844
XmnI GAANNNNTTC 2 cut(s) 633, 900
XspI CTAG 3 cut(s) 350, 554, 1474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.