disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2730 |
| Acc65I | GGTACC | 1 cut(s) | 3103 |
| AccB1I | GGYRCC | 1 cut(s) | 3103 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 450 |
| AccI | GTMKAC | 5 cut(s) | 96, 440, 1143, 2816, 3463 |
| AccII | CGCG | 2 cut(s) | 928, 1447 |
| AccIII | TCCGGA | 1 cut(s) | 3178 |
| AclI | AACGTT | 1 cut(s) | 128 |
| AclWI | GGATC | 4 cut(s) | 63, 1306, 2086, 3878 |
| AcoI | YGGCCR | 1 cut(s) | 3647 |
| AcsI | RAATTY | 9 cut(s) | 338, 519, 571, 1243, 1292, 1960, 1978, 2327, 3922 |
| AcuI | CTGAAG | 6 cut(s) | 290, 443, 1082, 1644, 2669, 3572 |
| AcyI | GRCGYC | 1 cut(s) | 82 |
| AdeI | CACNNNGTG | 1 cut(s) | 3917 |
| AfaI | GTAC | 3 cut(s) | 556, 598, 3105 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 2018, 2417, 2641, 3100, 3185, 4082 |
| AflII | CTTAAG | 1 cut(s) | 86 |
| AflIII | ACRYGT | 2 cut(s) | 926, 2268 |
| AjiI | CACGTC | 1 cut(s) | 741 |
| AjnI | CCWGG | 3 cut(s) | 3428, 4244, 4269 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 399, 431 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 29, 4240, 4272 |
| Alw21I | GWGCWC | 3 cut(s) | 771, 2301, 4162 |
| Alw26I | GTCTC | 5 cut(s) | 951, 2340, 2519, 3368, 3699 |
| AlwI | GGATC | 4 cut(s) | 63, 1306, 2086, 3878 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2545, 2631 |
| Ama87I | CYCGRG | 2 cut(s) | 402, 3365 |
| Aor13HI | TCCGGA | 1 cut(s) | 3178 |
| AoxI | GGCC | 6 cut(s) | 1381, 3418, 3647, 4084, 4263, 4392 |
| ApeKI | GCWGC | 9 cut(s) | 37, 109, 151, 321, 647, 1103, 1490, 1789, 3943 |
| ApoI | RAATTY | 9 cut(s) | 338, 519, 571, 1243, 1292, 1960, 1978, 2327, 3922 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3522 |
| Asp718I | GGTACC | 1 cut(s) | 3103 |
| AspLEI | GCGC | 1 cut(s) | 3820 |
| AspS9I | GGNCC | 4 cut(s) | 64, 485, 1381, 4084 |
| AsuC2I | CCSGG | 2 cut(s) | 32, 3915 |
| AsuII | TTCGAA | 2 cut(s) | 1982, 2847 |
| AvaI | CYCGRG | 2 cut(s) | 402, 3365 |
| AvaII | GGWCC | 2 cut(s) | 64, 485 |
| AxyI | CCTNAGG | 1 cut(s) | 3561 |
| BalI | TGGCCA | 1 cut(s) | 3649 |
| BanI | GGYRCC | 1 cut(s) | 3103 |
| BanII | GRGCYC | 3 cut(s) | 771, 2301, 3436 |
| BbsI | GAAGAC | 2 cut(s) | 2217, 2991 |
| Bbv12I | GWGCWC | 3 cut(s) | 771, 2301, 4162 |
| BbvCI | CCTCAGC | 1 cut(s) | 2013 |
| BbvI | GCAGC | 9 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1776, 3930 |
| BceAI | ACGGC | 3 cut(s) | 1081, 1368, 2494 |
| BciT130I | CCWGG | 3 cut(s) | 3430, 4246, 4271 |
| BcnI | CCSGG | 2 cut(s) | 32, 3915 |
| BcoDI | GTCTC | 5 cut(s) | 951, 2340, 2519, 3368, 3699 |
| BfmI | CTRYAG | 6 cut(s) | 720, 961, 1140, 1491, 2807, 4153 |
| BfoI | RGCGCY | 1 cut(s) | 3821 |
| BfrI | CTTAAG | 1 cut(s) | 86 |
| BglII | AGATCT | 1 cut(s) | 3953 |
| Bme1390I | CCNGG | 5 cut(s) | 32, 3430, 3915, 4246, 4271 |
| Bme18I | GGWCC | 2 cut(s) | 64, 485 |
| BmeT110I | CYCGRG | 2 cut(s) | 402, 3365 |
| BmgBI | CACGTC | 1 cut(s) | 741 |
| BmgT120I | GGNCC | 4 cut(s) | 64, 485, 1381, 4084 |
| BmiI | GGNNCC | 3 cut(s) | 2010, 3105, 3494 |
| BmrFI | CCNGG | 5 cut(s) | 32, 3430, 3915, 4246, 4271 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2784, 3507 |
| BpiI | GAAGAC | 2 cut(s) | 2217, 2991 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 51, 83 |
| BpmI | CTGGAG | 1 cut(s) | 3491 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2013 |
| Bpu14I | TTCGAA | 2 cut(s) | 1982, 2847 |
| BpuEI | CTTGAG | 4 cut(s) | 62, 2552, 3816, 4052 |
| BpuMI | CCSGG | 2 cut(s) | 32, 3915 |
| BsaAI | YACGTR | 1 cut(s) | 3455 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1199, 3662 |
| BsaHI | GRCGYC | 1 cut(s) | 82 |
| BsaI | GGTCTC | 2 cut(s) | 2340, 2519 |
| BsaJI | CCNNGG | 7 cut(s) | 449, 1557, 2308, 3428, 3429, 4269, 4270 |
| BsaWI | WCCGGW | 2 cut(s) | 2656, 3178 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 27, 971, 1001 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 2018, 2417, 2641, 3100, 3185, 4082 |
| Bse1I | ACTGG | 4 cut(s) | 627, 2789, 2905, 3054 |
| Bse21I | CCTNAGG | 1 cut(s) | 3561 |
| Bse3DI | GCAATG | 4 cut(s) | 872, 1093, 2042, 2123 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1199, 3662 |
| BseAI | TCCGGA | 1 cut(s) | 3178 |
| BseBI | CCWGG | 3 cut(s) | 3430, 4246, 4271 |
| BseDI | CCNNGG | 7 cut(s) | 449, 1557, 2308, 3428, 3429, 4269, 4270 |
| BseJI | GATNNNNATC | 2 cut(s) | 1199, 3662 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 2018, 2417, 2641, 3100, 3185, 4082 |
| BseMI | GCAATG | 4 cut(s) | 872, 1093, 2042, 2123 |
| BseNI | ACTGG | 4 cut(s) | 627, 2789, 2905, 3054 |
| BseRI | GAGGAG | 6 cut(s) | 179, 2001, 2924, 3341, 4094, 4164 |
| BseXI | GCAGC | 9 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1776, 3930 |
| Bsh1236I | CGCG | 2 cut(s) | 928, 1447 |
| BshFI | GGCC | 6 cut(s) | 1383, 3420, 3649, 4086, 4265, 4394 |
| BshNI | GGYRCC | 1 cut(s) | 3103 |
| BsiHKAI | GWGCWC | 3 cut(s) | 771, 2301, 4162 |
| BsiHKCI | CYCGRG | 2 cut(s) | 402, 3365 |
| BsiSI | CCGG | 5 cut(s) | 32, 2319, 2657, 3179, 3915 |
| BslFI | GGGAC | 3 cut(s) | 2134, 3579, 4318 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 91, 450, 494, 2018, 2417, 2641, 3100, 3185, 4082 |
| BsmAI | GTCTC | 5 cut(s) | 951, 2340, 2519, 3368, 3699 |
| BsmFI | GGGAC | 3 cut(s) | 2134, 3579, 4318 |
| BsmI | GAATGC | 1 cut(s) | 23 |
| BsnI | GGCC | 6 cut(s) | 1383, 3420, 3649, 4086, 4265, 4394 |
| Bso31I | GGTCTC | 2 cut(s) | 2340, 2519 |
| BsoBI | CYCGRG | 2 cut(s) | 402, 3365 |
| Bsp119I | TTCGAA | 2 cut(s) | 1982, 2847 |
| Bsp1286I | GDGCHC | 4 cut(s) | 771, 2301, 3436, 4162 |
| Bsp13I | TCCGGA | 1 cut(s) | 3178 |
| Bsp19I | CCATGG | 1 cut(s) | 449 |
| Bsp68I | TCGCGA | 1 cut(s) | 1447 |
| BspANI | GGCC | 6 cut(s) | 1383, 3420, 3649, 4086, 4265, 4394 |
| BspEI | TCCGGA | 1 cut(s) | 3178 |
| BspFNI | CGCG | 2 cut(s) | 928, 1447 |
| BspHI | TCATGA | 1 cut(s) | 2862 |
| BspLI | GGNNCC | 3 cut(s) | 2010, 3105, 3494 |
| BspMAI | CTGCAG | 2 cut(s) | 724, 1495 |
| BspPI | GGATC | 4 cut(s) | 63, 1306, 2086, 3878 |
| BspT104I | TTCGAA | 2 cut(s) | 1982, 2847 |
| BspT107I | GGYRCC | 1 cut(s) | 3103 |
| BspTI | CTTAAG | 1 cut(s) | 86 |
| BspTNI | GGTCTC | 2 cut(s) | 2340, 2519 |
| BsrDI | GCAATG | 4 cut(s) | 872, 1093, 2042, 2123 |
| BsrI | ACTGG | 4 cut(s) | 627, 2789, 2905, 3054 |
| BssECI | CCNNGG | 7 cut(s) | 449, 1557, 2308, 3428, 3429, 4269, 4270 |
| BssNI | GRCGYC | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 3 cut(s) | 449, 1557, 2308 |
| Bst2UI | CCWGG | 3 cut(s) | 3430, 4246, 4271 |
| Bst6I | CTCTTC | 3 cut(s) | 384, 1350, 3138 |
| BstACI | GRCGYC | 1 cut(s) | 82 |
| BstAFI | CTTAAG | 1 cut(s) | 86 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 321, 3034 |
| BstBAI | YACGTR | 1 cut(s) | 3455 |
| BstBI | TTCGAA | 2 cut(s) | 1982, 2847 |
| BstC8I | GCNNGC | 5 cut(s) | 808, 2179, 2572, 3059, 4088 |
| BstDSI | CCRYGG | 1 cut(s) | 449 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3098 |
| BstFNI | CGCG | 2 cut(s) | 928, 1447 |
| BstH2I | RGCGCY | 1 cut(s) | 3821 |
| BstHHI | GCGC | 1 cut(s) | 3820 |
| BstMAI | GTCTC | 5 cut(s) | 951, 2340, 2519, 3368, 3699 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 143, 321, 941, 1487, 2174, 2187, 3034 |
| BstNI | CCWGG | 3 cut(s) | 3430, 4246, 4271 |
| BstNSI | RCATGY | 3 cut(s) | 852, 2272, 2922 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2784, 3507 |
| BstSCI | CCNGG | 5 cut(s) | 30, 3428, 3913, 4244, 4269 |
| BstSFI | CTRYAG | 6 cut(s) | 720, 961, 1140, 1491, 2807, 4153 |
| BstSNI | TACGTA | 1 cut(s) | 3455 |
| BstUI | CGCG | 2 cut(s) | 928, 1447 |
| BstV1I | GCAGC | 9 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1776, 3930 |
| BstV2I | GAAGAC | 2 cut(s) | 2217, 2991 |
| BstX2I | RGATCY | 1 cut(s) | 3953 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 675, 1195 |
| BstYI | RGATCY | 1 cut(s) | 3953 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3561 |
| BsuRI | GGCC | 6 cut(s) | 1383, 3420, 3649, 4086, 4265, 4394 |
| BtgI | CCRYGG | 1 cut(s) | 449 |
| BtrI | CACGTC | 1 cut(s) | 741 |
| BtsI | GCAGTG | 1 cut(s) | 2472 |
| BtsIMutI | CAGTG | 4 cut(s) | 620, 2472, 3717, 4395 |
| BtuMI | TCGCGA | 1 cut(s) | 1447 |
| Cac8I | GCNNGC | 5 cut(s) | 808, 2179, 2572, 3059, 4088 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2545, 2631 |
| CciI | TCATGA | 1 cut(s) | 2862 |
| CfoI | GCGC | 1 cut(s) | 3820 |
| Cfr13I | GGNCC | 4 cut(s) | 64, 485, 1381, 4084 |
| CseI | GACGC | 4 cut(s) | 90, 653, 934, 1955 |
| Csp6I | GTAC | 3 cut(s) | 555, 597, 3104 |
| CviQI | GTAC | 3 cut(s) | 555, 597, 3104 |
| DraIII | CACNNNGTG | 1 cut(s) | 3917 |
| EaeI | YGGCCR | 1 cut(s) | 3647 |
| Eam1104I | CTCTTC | 3 cut(s) | 384, 1350, 3138 |
| EarI | CTCTTC | 3 cut(s) | 384, 1350, 3138 |
| EciI | GGCGGA | 2 cut(s) | 68, 871 |
| Ecl136II | GAGCTC | 2 cut(s) | 769, 2299 |
| Eco105I | TACGTA | 1 cut(s) | 3455 |
| Eco130I | CCWWGG | 3 cut(s) | 449, 1557, 2308 |
| Eco24I | GRGCYC | 3 cut(s) | 771, 2301, 3436 |
| Eco31I | GGTCTC | 2 cut(s) | 2340, 2519 |
| Eco32I | GATATC | 2 cut(s) | 1775, 2691 |
| Eco47I | GGWCC | 2 cut(s) | 64, 485 |
| Eco53kI | GAGCTC | 2 cut(s) | 769, 2299 |
| Eco57I | CTGAAG | 6 cut(s) | 290, 443, 1082, 1644, 2669, 3572 |
| Eco81I | CCTNAGG | 1 cut(s) | 3561 |
| Eco88I | CYCGRG | 2 cut(s) | 402, 3365 |
| EcoICRI | GAGCTC | 2 cut(s) | 769, 2299 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3098 |
| EcoO109I | RGGNCCY | 2 cut(s) | 64, 4084 |
| EcoRI | GAATTC | 1 cut(s) | 1978 |
| EcoRII | CCWGG | 3 cut(s) | 3428, 4244, 4269 |
| EcoRV | GATATC | 2 cut(s) | 1775, 2691 |
| EcoT14I | CCWWGG | 3 cut(s) | 449, 1557, 2308 |
| EcoT22I | ATGCAT | 2 cut(s) | 317, 1461 |
| EcoT38I | GRGCYC | 3 cut(s) | 771, 2301, 3436 |
| ErhI | CCWWGG | 3 cut(s) | 449, 1557, 2308 |
| FaqI | GGGAC | 3 cut(s) | 2134, 3579, 4318 |
| FblI | GTMKAC | 5 cut(s) | 96, 440, 1143, 2816, 3463 |
| FriOI | GRGCYC | 3 cut(s) | 771, 2301, 3436 |
| GlaI | GCGC | 1 cut(s) | 3819 |
| GsuI | CTGGAG | 1 cut(s) | 3491 |
| HaeII | RGCGCY | 1 cut(s) | 3821 |
| HaeIII | GGCC | 6 cut(s) | 1383, 3420, 3649, 4086, 4265, 4394 |
| HapII | CCGG | 5 cut(s) | 32, 2319, 2657, 3179, 3915 |
| HgaI | GACGC | 4 cut(s) | 90, 653, 934, 1955 |
| HhaI | GCGC | 1 cut(s) | 3820 |
| Hin1I | GRCGYC | 1 cut(s) | 82 |
| Hin6I | GCGC | 1 cut(s) | 3818 |
| HinP1I | GCGC | 1 cut(s) | 3818 |
| HincII | GTYRAC | 6 cut(s) | 97, 132, 714, 2402, 2817, 3512 |
| HindII | GTYRAC | 6 cut(s) | 97, 132, 714, 2402, 2817, 3512 |
| HindIII | AAGCTT | 6 cut(s) | 2517, 2615, 2663, 3059, 4061, 4409 |
| HpaII | CCGG | 5 cut(s) | 32, 2319, 2657, 3179, 3915 |
| Hpy99I | CGWCG | 3 cut(s) | 647, 928, 3878 |
| HpyCH4IV | ACGT | 6 cut(s) | 128, 740, 1129, 1483, 3067, 3454 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 143, 321, 941, 1487, 2174, 2187, 3034 |
| HpySE526I | ACGT | 6 cut(s) | 128, 740, 1129, 1483, 3067, 3454 |
| Hsp92I | GRCGYC | 1 cut(s) | 82 |
| HspAI | GCGC | 1 cut(s) | 3818 |
| Kpn2I | TCCGGA | 1 cut(s) | 3178 |
| KpnI | GGTACC | 1 cut(s) | 3107 |
| LmnI | GCTCC | 5 cut(s) | 896, 2014, 2911, 2927, 3951 |
| Lsp1109I | GCAGC | 9 cut(s) | 24, 96, 138, 308, 634, 1090, 1477, 1776, 3930 |
| MaeII | ACGT | 6 cut(s) | 128, 740, 1129, 1483, 3067, 3454 |
| MfeI | CAATTG | 5 cut(s) | 1307, 1800, 2423, 3038, 3972 |
| MflI | RGATCY | 1 cut(s) | 3953 |
| MhlI | GDGCHC | 4 cut(s) | 771, 2301, 3436, 4162 |
| MlsI | TGGCCA | 1 cut(s) | 3649 |
| MluI | ACGCGT | 1 cut(s) | 926 |
| MluNI | TGGCCA | 1 cut(s) | 3649 |
| MlyI | GAGTC | 6 cut(s) | 989, 1105, 1529, 1862, 2231, 4045 |
| MmeI | TCCRAC | 4 cut(s) | 874, 983, 1212, 4074 |
| Mox20I | TGGCCA | 1 cut(s) | 3649 |
| Mph1103I | ATGCAT | 2 cut(s) | 317, 1461 |
| MroI | TCCGGA | 1 cut(s) | 3178 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3522 |
| MscI | TGGCCA | 1 cut(s) | 3649 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1943 |
| Msp20I | TGGCCA | 1 cut(s) | 3649 |
| MspA1I | CMGCKG | 2 cut(s) | 321, 3469 |
| MspCI | CTTAAG | 1 cut(s) | 86 |
| MspI | CCGG | 5 cut(s) | 32, 2319, 2657, 3179, 3915 |
| MspR9I | CCNGG | 5 cut(s) | 32, 3430, 3915, 4246, 4271 |
| MunI | CAATTG | 5 cut(s) | 1307, 1800, 2423, 3038, 3972 |
| Mva1269I | GAATGC | 1 cut(s) | 23 |
| MvaI | CCWGG | 3 cut(s) | 3430, 4246, 4271 |
| MvnI | CGCG | 2 cut(s) | 928, 1447 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 143, 321, 941, 1487, 2174, 2187, 3034 |
| NciI | CCSGG | 2 cut(s) | 32, 3915 |
| NcoI | CCATGG | 1 cut(s) | 449 |
| NlaIV | GGNNCC | 3 cut(s) | 2010, 3105, 3494 |
| NmeAIII | GCCGAG | 1 cut(s) | 3657 |
| NmuCI | GTSAC | 5 cut(s) | 736, 919, 1385, 1967, 2234 |
| NruI | TCGCGA | 1 cut(s) | 1447 |
| NsiI | ATGCAT | 2 cut(s) | 317, 1461 |
| NspI | RCATGY | 3 cut(s) | 852, 2272, 2922 |
| NspV | TTCGAA | 2 cut(s) | 1982, 2847 |
| PaeR7I | CTCGAG | 2 cut(s) | 402, 3365 |
| PagI | TCATGA | 1 cut(s) | 2862 |
| PasI | CCCWGGG | 2 cut(s) | 3429, 4270 |
| PciI | ACATGT | 1 cut(s) | 2268 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 932, 4109 |
| PctI | GAATGC | 1 cut(s) | 23 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3522 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 450 |
| PleI | GAGTC | 6 cut(s) | 988, 1105, 1529, 1862, 2231, 4044 |
| PpsI | GAGTC | 6 cut(s) | 988, 1105, 1529, 1862, 2231, 4044 |
| Ppu21I | YACGTR | 1 cut(s) | 3455 |
| PpuMI | RGGWCCY | 1 cut(s) | 64 |
| PscI | ACATGT | 1 cut(s) | 2268 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2784, 3507 |
| PsiI | TTATAA | 1 cut(s) | 2730 |
| Psp124BI | GAGCTC | 2 cut(s) | 771, 2301 |
| Psp1406I | AACGTT | 1 cut(s) | 128 |
| Psp5II | RGGWCCY | 1 cut(s) | 64 |
| Psp6I | CCWGG | 3 cut(s) | 3428, 4244, 4269 |
| PspGI | CCWGG | 3 cut(s) | 3428, 4244, 4269 |
| PspN4I | GGNNCC | 3 cut(s) | 2010, 3105, 3494 |
| PspPI | GGNCC | 4 cut(s) | 64, 485, 1381, 4084 |
| PspPPI | RGGWCCY | 1 cut(s) | 64 |
| PstI | CTGCAG | 2 cut(s) | 724, 1495 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2545, 2631 |
| PsuI | RGATCY | 1 cut(s) | 3953 |
| PvuII | CAGCTG | 2 cut(s) | 321, 3469 |
| RruI | TCGCGA | 1 cut(s) | 1447 |
| RsaI | GTAC | 3 cut(s) | 556, 598, 3105 |
| RsaNI | GTAC | 3 cut(s) | 555, 597, 3104 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1943 |
| SacI | GAGCTC | 2 cut(s) | 771, 2301 |
| SalI | GTCGAC | 2 cut(s) | 95, 2815 |
| Sau96I | GGNCC | 4 cut(s) | 64, 485, 1381, 4084 |
| SchI | GAGTC | 6 cut(s) | 989, 1105, 1529, 1862, 2231, 4045 |
| ScrFI | CCNGG | 5 cut(s) | 32, 3430, 3915, 4246, 4271 |
| SduI | GDGCHC | 4 cut(s) | 771, 2301, 3436, 4162 |
| SfcI | CTRYAG | 6 cut(s) | 720, 961, 1140, 1491, 2807, 4153 |
| Sfr274I | CTCGAG | 2 cut(s) | 402, 3365 |
| SfuI | TTCGAA | 2 cut(s) | 1982, 2847 |
| SinI | GGWCC | 2 cut(s) | 64, 485 |
| SlaI | CTCGAG | 2 cut(s) | 402, 3365 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1943 |
| SmlI | CTYRAG | 7 cut(s) | 41, 86, 402, 2531, 3365, 3831, 4031 |
| SmoI | CTYRAG | 7 cut(s) | 41, 86, 402, 2531, 3365, 3831, 4031 |
| SnaBI | TACGTA | 1 cut(s) | 3455 |
| SspI | AATATT | 1 cut(s) | 1161 |
| SstI | GAGCTC | 2 cut(s) | 771, 2301 |
| StyD4I | CCNGG | 5 cut(s) | 30, 3428, 3913, 4244, 4269 |
| StyI | CCWWGG | 3 cut(s) | 449, 1557, 2308 |
| TaiI | ACGT | 6 cut(s) | 131, 743, 1132, 1486, 3070, 3457 |
| TaqII | GACCGA | 1 cut(s) | 1799 |
| TauI | GCSGC | 2 cut(s) | 2413, 4268 |
| TscAI | CASTG | 4 cut(s) | 627, 2472, 3724, 4402 |
| TseFI | GTSAC | 5 cut(s) | 736, 919, 1385, 1967, 2234 |
| TseI | GCWGC | 9 cut(s) | 37, 109, 151, 321, 647, 1103, 1490, 1789, 3943 |
| Tsp45I | GTSAC | 5 cut(s) | 736, 919, 1385, 1967, 2234 |
| TspGWI | ACGGA | 1 cut(s) | 1926 |
| TspRI | CASTG | 4 cut(s) | 627, 2472, 3724, 4402 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 450 |
| Vha464I | CTTAAG | 1 cut(s) | 86 |
| VpaK11BI | GGWCC | 2 cut(s) | 64, 485 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3098 |
| XapI | RAATTY | 9 cut(s) | 338, 519, 571, 1243, 1292, 1960, 1978, 2327, 3922 |
| XbaI | TCTAGA | 3 cut(s) | 829, 1508, 3136 |
| XceI | RCATGY | 3 cut(s) | 852, 2272, 2922 |
| XhoI | CTCGAG | 2 cut(s) | 402, 3365 |
| XmiI | GTMKAC | 5 cut(s) | 96, 440, 1143, 2816, 3463 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3522 |
| Zsp2I | ATGCAT | 2 cut(s) | 317, 1461 |