Rw1G006650

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000070
Physical Location & Seq
Forward (+)
13640584 .. 13641960
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G006650.1

Sequence Viewer

Length: 1377 bp
ATGGGAGAGGCTGTACTTGGGGCATTCCTTCCGGTGCTGCTCGACAAGTTAGCGCATCGAGAGGTCTTTCAGTACTTCGGACGCCTTAAGGGGGTCGGCAAAAAGGCACTGGAGAAATGGACTAAAATGTTGACTGCAATTGAAGCGGTGCTGAGTGATGCGGAGGAGAAGCAACTAACACAAAAAGGAGTGAAAATGTGGCTAGATGATCTCAGAGATTTGGCTTATGATATTGAAGACATATTGGACATAGTTGCTACTAAAATGCTGAAGCGAAGGATAGAAAGACATCAAGGAAGCAGACGCAAGTTATGGATCAGCTCACTTTCTAAACTTAAATTCAATTCTAGTTTGAACTCAGAGATCCAGAAGATTACTGATCGGCTAGAAGAGATATCTAATAGAGAAAAACAGTTTGGATTGAAGAAACTAGGAGTGTCTAAAAAGCCATGGAAAATGCCACCCACTACATCTCAACTAGATGGACCTGTGATCGGAAGGGATGAAGCAAAAGCAACAATTCTTGATGATTTGCTCTCAAAAGGCGAACAAAGTACCAACAATTTTCAGAATTTTCACGTGGTTTCCATTGTTGGTACGGCTGGACTAGGGAAGACAACACTTGCCAAACATGTATTCAACGATGCTGTAACAGAACAGTTTTACCCAAAGGGATGGGTGTCTCTGTCCGATGACTTCGACCTTCTAAGGGTGACAACTGCAGTTCTTGAATCTGTCACGTCAGGTGATGTGAAGAAATCCAAAGAGCTCAACTCAGTTCAGGAGAAGTTGAGTAAGGAATTGGCTGGCAGAAAGTTTTTAATTGTTCTAGATGATGTCTGGAATACATGCAACTATGATCAATGGACAACATTGCAGTCCGCGTTTCGTGTTGGAGCAGTAGGAAGCAAGATCATAGTGACGACACGTGATGCGAATGTTGCAAAGATGATGGGAGACACTGAACCTTATAACTTGGAGTCGATGTCAGAAGATGATTGTTGGAAAATCTTTGTCAACCATGCACTCTTAAACAACAGACCCCAAGATGTTGAGTTATTTAAGGAGAAAATTGTAGTAAAATGCAATGGATTGCCGTTGGCTGCAAGGACTCTTGGAGGTCTTTTACGTTGTAAAAGAGCAGACGAGTGGGAAGAAATATTAGATCACAAGATGTGGAATCTATCCGACCAGATGGGCATCCTTCCAGCATTACAATTGAGCTATCATTATCTCCATTCGAATTTGAAACGCTGCTTCACCTACTGTGCAATACTTCCAAATGATTACGAATTTGGGGAGATGCAAATGATCCTATTGTGGATGGCAGAGGGTTTGATTCCGCAACAACTAAAAGAAAATAAAGAAATGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

458

Amino Acids

52.11

Weight (kDa)

7.57

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 98 4.6e-20 Rx N-terminal domain
NB-ARC PF00931 190 - 343 1.1e-34 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000070)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g00360 FvH4_7g00850 FvH4_7g02400 FvH4_7g02430 FvH4_7g02450 FvH4_7g25671 FvH4_7g25680 FvH4_7g25683 FvH4_7g26980 FvH4_7g27330 FvH4_7g27355 FvH4_7g27610 FvH4_7g27642 FvH4_7g27890 FvH4_7g27891 FvH4_7g27891 FvH4_7g27891 FvH4_7g28110 FvH4_7g28390
malus_domestica MD00G1070800.v1.1 MD00G1168000.v1.1 MD00G1168300.v1.1 MD00G1168700.v1.1 MD02G1293100.v1.1 MD02G1293200.v1.1 MD02G1314300.v1.1 MD03G1009000.v1.1 MD03G1009400.v1.1 MD03G1042300.v1.1 MD03G1042400.v1.1 MD07G1033600.v1.1 MD07G1033700.v1.1 MD07G1033900.v1.1 MD11G1011400.v1.1 MD11G1011700.v1.1 MD11G1029800.v1.1 MD11G1029900.v1.1 MD11G1030300.v1.1 MD11G1030400.v1.1 MD11G1030500.v1.1 MD11G1031300.v1.1 MD11G1031600.v1.1 MD11G1032000.v1.1 MD11G1033200.v1.1 MD11G1033600.v1.1 MD11G1033800.v1.1 MD11G1033900.v1.1 MD11G1034100.v1.1 MD11G1034400.v1.1 MD11G1040600.v1.1 MD11G1041100.v1.1 MD11G1043100.v1.1 MD11G1043500.v1.1 MD11G1044500.v1.1 MD11G1045100.v1.1 MD11G1045600.v1.1
prunus_persica Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022400_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022500_v2.0.a1 Prupe.2G022900_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023500_v2.0.a1 Prupe.2G023600_v2.0.a1 Prupe.2G028000_v2.0.a1 Prupe.2G030200_v2.0.a1 Prupe.2G067600_v2.0.a1 Prupe.8G117900_v2.0.a1
pyrus_communis pycom02g26350 pycom03g03270 pycom07g02370 pycom11g00750 pycom11g00790 pycom11g02340 pycom11g02370 pycom11g02380 pycom11g02390 pycom11g02410 pycom11g02460 pycom11g02470 pycom11g02500 pycom11g02510 pycom11g02520 pycom11g02530 pycom11g02580 pycom11g02590 pycom11g02680 pycom11g02710 pycom11g02720 pycom11g02730 pycom11g02750 pycom11g02760 pycom11g02770 pycom11g03690 pycom13g25120 pycom13g25130 pycom13g25140 pycom13g25170 pycom13g25180 pycom13g25190 pycom13g25210
rosa_chinensis RchiOBHm_Chr1g0315001 RchiOBHm_Chr1g0315411 RchiOBHm_Chr1g0317951 RchiOBHm_Chr1g0319741 RchiOBHm_Chr1g0319841 RchiOBHm_Chr1g0319911 RchiOBHm_Chr1g0319991 RchiOBHm_Chr1g0320001 RchiOBHm_Chr1g0320021 RchiOBHm_Chr1g0320081 RchiOBHm_Chr1g0320111 RchiOBHm_Chr1g0320131 RchiOBHm_Chr1g0320161 RchiOBHm_Chr1g0320171 RchiOBHm_Chr1g0320241 RchiOBHm_Chr1g0320281 RchiOBHm_Chr1g0320411 RchiOBHm_Chr1g0320461 RchiOBHm_Chr1g0320551 RchiOBHm_Chr1g0320581 RchiOBHm_Chr1g0320661 RchiOBHm_Chr1g0320891 RchiOBHm_Chr1g0320971 RchiOBHm_Chr1g0321021 RchiOBHm_Chr1g0321031 RchiOBHm_Chr1g0321091 RchiOBHm_Chr1g0321351 RchiOBHm_Chr1g0321481 RchiOBHm_Chr1g0321491 RchiOBHm_Chr1g0327521 RchiOBHm_Chr1g0328061 RchiOBHm_Chr1g0334991 RchiOBHm_Chr1g0373781 RchiOBHm_Chr1g0373891 RchiOBHm_Chr1g0374841 RchiOBHm_Chr2g0131111 RchiOBHm_Chr2g0131121 RchiOBHm_Chr4g0408901 RchiOBHm_Chr5g0041691 RchiOBHm_Chr7g0237021
rosa_laevigata RLG00000019168 RLG00000030456 RLG00000030460 RLG00000030571
rosa_multiflora Rmu_co7963468.1_g000001 Rmu_co7991248.1_g000001 Rmu_co8195256.1_g000001 Rmu_co8312199.1_g000001 Rmu_co8349215.1_g000001 Rmu_co8351041.1_g000001 Rmu_co8422719.1_g000001 Rmu_co8450711.1_g000001 Rmu_co8465555.1_g000001 Rmu_co8489965.1_g000001 Rmu_sc0000087.1_g000014 Rmu_sc0000272.1_g000015 Rmu_sc0000724.1_g000006 Rmu_sc0000724.1_g000021 Rmu_sc0000724.1_g000022 Rmu_sc0000861.1_g000024 Rmu_sc0001049.1_g000006 Rmu_sc0001049.1_g000007 Rmu_sc0001512.1_g000001 Rmu_sc0002022.1_g000004 Rmu_sc0002063.1_g000011 Rmu_sc0002131.1_g000024 Rmu_sc0002337.1_g000012 Rmu_sc0002341.1_g000005 Rmu_sc0002539.1_g000117 Rmu_sc0002745.1_g000005 Rmu_sc0002745.1_g000006 Rmu_sc0003145.1_g000002 Rmu_sc0003199.1_g000007 Rmu_sc0003270.1_g000039 Rmu_sc0003270.1_g000040 Rmu_sc0003423.1_g000001 Rmu_sc0003423.1_g000002 Rmu_sc0003629.1_g000067 Rmu_sc0004039.1_g000002 Rmu_sc0004555.1_g000001 Rmu_sc0004555.1_g000005 Rmu_sc0004555.1_g000006 Rmu_sc0004947.1_g000025 Rmu_sc0004947.1_g000026 Rmu_sc0005255.1_g000025 Rmu_sc0007977.1_g000016 Rmu_sc0008752.1_g000005 Rmu_sc0009236.1_g000004 Rmu_sc0009236.1_g000008 Rmu_sc0009236.1_g000009 Rmu_sc0009236.1_g000010 Rmu_sc0011424.1_g000036 Rmu_sc0013413.1_g000001 Rmu_sc0013735.1_g000002 Rmu_sc0015304.1_g000002 Rmu_sc0015304.1_g000003 Rmu_sc0015585.1_g000001 Rmu_sc0018410.1_g000001 Rmu_sc0022723.1_g000001 Rmu_sc0022723.1_g000002 Rmu_sc0022724.1_g000001 Rmu_sc0023430.1_g000001 Rmu_sc0026053.1_g000001 Rmu_sc0026429.1_g000002 Rmu_sc0026647.1_g000001 Rmu_sc0031359.1_g000001 Rmu_ssc0000042.1_g000040 Rmu_ssc0000081.1_g000001 Rmu_ssc0000300.1_g000011
rosa_roxburghii Rroxscaffold_160G00433620 Rroxscaffold_160G00433990 Rroxscaffold_1G00038820 Rroxscaffold_2G00113190 Rroxscaffold_4G00283240 Rroxscaffold_4G00283930 Rroxscaffold_4G00284010 Rroxscaffold_4G00322600 Rroxscaffold_4G00327710 Rroxscaffold_4G00328100 Rroxscaffold_4G00328130 Rroxscaffold_4G00331590 Rroxscaffold_5G00353280
rosa_rugosa Rorug01G0004200 Rorug01G0018800 Rorug01G0018900 Rorug01G0029900 Rorug01G0030000 Rorug01G0030000 Rorug01G0030000 Rorug01G0030200 Rorug01G0030300 Rorug01G0030800 Rorug01G0032400 Rorug01G0032900 Rorug01G0055800 Rorug01G0067600 Rorug01G0067700 Rorug01G0067800 Rorug01G0067900 Rorug01G0068000 Rorug01G0379500 Rorug01G0379600 Rorug01G0379600 Rorug01G0385200 Rorug01G0385300 Rorug02G0295100 Rorug04G0088500 Rorug04G0088600 Rorug05G0194900 Rorug07G0301400
rosa_samantha Rh1AG014800 Rh1AG015200 Rh1AG030500 Rh1AG041800 Rh1AG042300 Rh1AG042700 Rh1AG042800 Rh1AG042900 Rh1AG045000 Rh1AG085100 Rh1AG085200 Rh1AG388600 Rh1AG396700 Rh1AG396900 Rh1BG007300 Rh1BG039200 Rh1BG039600 Rh1BG042800 Rh1BG067300 Rh1BG109700 Rh1BG109900 Rh1BG354000 Rh1CG043800 Rh1CG044400 Rh1DG008600 Rh1DG022900 Rh1DG023400 Rh1DG023600 Rh1DG023900 Rh1DG024100 Rh1DG024400 Rh1DG024500 Rh1DG025500 Rh1DG025700 Rh1DG026500 Rh1DG026800 Rh1DG038900 Rh1DG048800 Rh1DG049300 Rh1DG051700 Rh1DG052000 Rh1DG146200 Rh1DG383500 Rh2BG354900 Rh2CG333600 Rh4BG149600 Rh4BG149700 Rh4CG160600
rosa_wichuraiana Rw0G001100 Rw0G001130 Rw0G001180 Rw0G012580 Rw1G003480 Rw1G003540 Rw1G003600 Rw1G003640 Rw1G003670 Rw1G003750 Rw1G003940 Rw1G006650 Rw1G034550 Rw1G034560 Rw1G034650 Rw1G034660 Rw1G035170 Rw1G035190 Rw1G037060 Rw2G028210 Rw4G012540 Rw5G026370 Rw7G037900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 972
AccII CGCG 1 cut(s) 884
AciI CCGC 4 cut(s) 146, 161, 882, 1343
AclWI GGATC 3 cut(s) 323, 358, 1306
AcsI RAATTY 4 cut(s) 338, 571, 1243, 1292
AcuI CTGAAG 1 cut(s) 290
AcvI CACGTG 2 cut(s) 580, 929
AcyI GRCGYC 1 cut(s) 82
AfaI GTAC 4 cut(s) 15, 74, 556, 598
AfiI CCNNNNNNNGG 3 cut(s) 91, 494, 709
AflII CTTAAG 1 cut(s) 86
AflIII ACRYGT 2 cut(s) 631, 926
AgsI TTSAA 8 cut(s) 143, 236, 343, 355, 424, 640, 731, 1249
AjiI CACGTC 1 cut(s) 741
AjuI GAANNNNNNNTTGG 4 cut(s) 399, 431, 620, 652
AluBI AGCT 3 cut(s) 321, 769, 1224
AluI AGCT 3 cut(s) 321, 769, 1224
Alw21I GWGCWC 1 cut(s) 771
Alw26I GTCTC 2 cut(s) 687, 951
AlwI GGATC 3 cut(s) 323, 358, 1306
ApeKI GCWGC 3 cut(s) 37, 1103, 1254
ApoI RAATTY 4 cut(s) 338, 571, 1243, 1292
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 1 cut(s) 485
AsuHPI GGTGA 3 cut(s) 724, 758, 1252
AsuII TTCGAA 1 cut(s) 1241
AvaII GGWCC 1 cut(s) 485
BanII GRGCYC 1 cut(s) 771
BbrPI CACGTG 2 cut(s) 580, 929
BbsI GAAGAC 2 cut(s) 243, 620
Bbv12I GWGCWC 1 cut(s) 771
BbvI GCAGC 3 cut(s) 24, 1090, 1241
BccI CCATC 5 cut(s) 476, 669, 946, 1189, 1318
BceAI ACGGC 2 cut(s) 615, 1081
BclI TGATCA 1 cut(s) 859
BcoDI GTCTC 2 cut(s) 687, 951
BfaI CTAG 7 cut(s) 203, 348, 386, 431, 479, 608, 830
BfmI CTRYAG 1 cut(s) 720
BfrI CTTAAG 1 cut(s) 86
BisI GCNGC 3 cut(s) 38, 1104, 1255
BlsI GCNGC 3 cut(s) 39, 1105, 1256
BmcAI AGTACT 1 cut(s) 74
Bme18I GGWCC 1 cut(s) 485
BmgBI CACGTC 1 cut(s) 741
BmgT120I GGNCC 1 cut(s) 485
BmsI GCATC 6 cut(s) 64, 148, 634, 922, 1209, 1293
BpiI GAAGAC 2 cut(s) 243, 620
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 1 cut(s) 131
Bpu14I TTCGAA 1 cut(s) 1241
BsaAI YACGTR 2 cut(s) 580, 929
BsaBI GATNNNNATC 1 cut(s) 1199
BsaHI GRCGYC 1 cut(s) 82
BsaJI CCNNGG 1 cut(s) 449
BsaWI WCCGGW 1 cut(s) 31
BsaXI ACNNNNNCTCC 3 cut(s) 27, 971, 1001
Bsc4I CCNNNNNNNGG 3 cut(s) 91, 494, 709
Bse1I ACTGG 1 cut(s) 114
Bse3DI GCAATG 2 cut(s) 872, 1093
Bse8I GATNNNNATC 1 cut(s) 1199
BseDI CCNNGG 1 cut(s) 449
BseGI GGATG 4 cut(s) 508, 680, 1200, 1329
BseJI GATNNNNATC 1 cut(s) 1199
BseLI CCNNNNNNNGG 3 cut(s) 91, 494, 709
BseMI GCAATG 2 cut(s) 872, 1093
BseMII CTCAG 4 cut(s) 143, 226, 372, 789
BseNI ACTGG 1 cut(s) 114
BseRI GAGGAG 1 cut(s) 179
BseXI GCAGC 3 cut(s) 24, 1090, 1241
Bsh1236I CGCG 1 cut(s) 884
BsiHKAI GWGCWC 1 cut(s) 771
BsiSI CCGG 1 cut(s) 32
BslI CCNNNNNNNGG 3 cut(s) 91, 494, 709
BsmAI GTCTC 2 cut(s) 687, 951
BsmI GAATGC 1 cut(s) 23
Bsp119I TTCGAA 1 cut(s) 1241
Bsp1286I GDGCHC 1 cut(s) 771
Bsp143I GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
Bsp19I CCATGG 1 cut(s) 449
BspACI CCGC 4 cut(s) 146, 161, 882, 1343
BspCNI CTCAG 4 cut(s) 144, 225, 371, 788
BspFNI CGCG 1 cut(s) 884
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 3 cut(s) 323, 358, 1306
BspT104I TTCGAA 1 cut(s) 1241
BspTI CTTAAG 1 cut(s) 86
BsrDI GCAATG 2 cut(s) 872, 1093
BsrI ACTGG 1 cut(s) 114
BssECI CCNNGG 1 cut(s) 449
BssMI GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
BssNI GRCGYC 1 cut(s) 82
BssT1I CCWWGG 1 cut(s) 449
Bst4CI ACNGT 3 cut(s) 414, 660, 1268
Bst6I CTCTTC 1 cut(s) 384
BstACI GRCGYC 1 cut(s) 82
BstAFI CTTAAG 1 cut(s) 86
BstBAI YACGTR 2 cut(s) 580, 929
BstBI TTCGAA 1 cut(s) 1241
BstC8I GCNNGC 1 cut(s) 808
BstDEI CTNAG 5 cut(s) 152, 212, 358, 707, 775
BstDSI CCRYGG 1 cut(s) 449
BstF5I GGATG 4 cut(s) 508, 680, 1200, 1329
BstFNI CGCG 1 cut(s) 884
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 9 cut(s) 211, 318, 366, 382, 495, 862, 915, 1168, 1314
BstMAI GTCTC 2 cut(s) 687, 951
BstMBI GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
BstMWI GCNNNNNNNGC 2 cut(s) 143, 941
BstNSI RCATGY 2 cut(s) 635, 852
BstSFI CTRYAG 1 cut(s) 720
BstUI CGCG 1 cut(s) 884
BstV1I GCAGC 3 cut(s) 24, 1090, 1241
BstV2I GAAGAC 2 cut(s) 243, 620
BstX2I RGATCY 1 cut(s) 363
BstXI CCANNNNNNTGG 1 cut(s) 675
BstYI RGATCY 1 cut(s) 363
BtgI CCRYGG 1 cut(s) 449
BtrI CACGTC 1 cut(s) 741
BtsCI GGATG 4 cut(s) 508, 680, 1200, 1329
BtsIMutI CAGTG 2 cut(s) 107, 960
Cac8I GCNNGC 1 cut(s) 808
CfoI GCGC 1 cut(s) 55
Cfr13I GGNCC 1 cut(s) 485
CseI GACGC 2 cut(s) 90, 312
Csp6I GTAC 4 cut(s) 14, 73, 555, 597
CviAII CATG 4 cut(s) 450, 632, 849, 1022
CviQI GTAC 4 cut(s) 14, 73, 555, 597
DdeI CTNAG 5 cut(s) 152, 212, 358, 707, 775
DpnI GATC 9 cut(s) 210, 317, 365, 381, 494, 861, 914, 1167, 1313
DpnII GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
Eam1104I CTCTTC 1 cut(s) 384
EarI CTCTTC 1 cut(s) 384
Ecl136II GAGCTC 1 cut(s) 769
Eco130I CCWWGG 1 cut(s) 449
Eco24I GRGCYC 1 cut(s) 771
Eco32I GATATC 1 cut(s) 396
Eco47I GGWCC 1 cut(s) 485
Eco53kI GAGCTC 1 cut(s) 769
Eco57I CTGAAG 1 cut(s) 290
Eco72I CACGTG 2 cut(s) 580, 929
EcoICRI GAGCTC 1 cut(s) 769
EcoRV GATATC 1 cut(s) 396
EcoT14I CCWWGG 1 cut(s) 449
EcoT38I GRGCYC 1 cut(s) 771
ErhI CCWWGG 1 cut(s) 449
FaeI CATG 4 cut(s) 453, 635, 852, 1025
FatI CATG 4 cut(s) 449, 631, 848, 1021
FbaI TGATCA 1 cut(s) 859
Fnu4HI GCNGC 3 cut(s) 38, 1104, 1255
FokI GGATG 4 cut(s) 515, 687, 1187, 1336
FriOI GRGCYC 1 cut(s) 771
Fsp4HI GCNGC 3 cut(s) 38, 1104, 1255
FspBI CTAG 7 cut(s) 203, 348, 386, 431, 479, 608, 830
GlaI GCGC 1 cut(s) 54
GluI GCNGC 3 cut(s) 38, 1104, 1255
GsuI CTGGAG 1 cut(s) 131
HapII CCGG 1 cut(s) 32
HgaI GACGC 2 cut(s) 90, 312
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 1 cut(s) 82
Hin1II CATG 4 cut(s) 453, 635, 852, 1025
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HincII GTYRAC 2 cut(s) 132, 1018
HindII GTYRAC 2 cut(s) 132, 1018
HinfI GANTC 5 cut(s) 731, 980, 1111, 1180, 1339
HpaII CCGG 1 cut(s) 32
HphI GGTGA 3 cut(s) 724, 758, 1252
Hpy166II GTNNAC 2 cut(s) 132, 1018
Hpy188I TCNGA 8 cut(s) 80, 215, 361, 497, 570, 691, 991, 1189
Hpy188III TCNNGA 7 cut(s) 59, 367, 524, 728, 782, 830, 841
Hpy8I GTNNAC 2 cut(s) 132, 1018
HpyAV CCTTC 5 cut(s) 38, 270, 492, 713, 1214
HpyCH4III ACNGT 3 cut(s) 414, 660, 1268
HpyCH4IV ACGT 4 cut(s) 579, 740, 928, 1129
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 941
HpyF3I CTNAG 5 cut(s) 152, 212, 358, 707, 775
HpySE526I ACGT 4 cut(s) 579, 740, 928, 1129
Hsp92I GRCGYC 1 cut(s) 82
Hsp92II CATG 4 cut(s) 453, 635, 852, 1025
HspAI GCGC 1 cut(s) 53
Ksp22I TGATCA 1 cut(s) 859
Kzo9I GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
LmnI GCTCC 1 cut(s) 896
Lsp1109I GCAGC 3 cut(s) 24, 1090, 1241
LweI GCATC 6 cut(s) 64, 148, 634, 922, 1209, 1293
MaeI CTAG 7 cut(s) 203, 348, 386, 431, 479, 608, 830
MaeII ACGT 4 cut(s) 579, 740, 928, 1129
MaeIII GTNAC 4 cut(s) 649, 712, 736, 919
MalI GATC 9 cut(s) 210, 317, 365, 381, 494, 861, 914, 1167, 1313
MboI GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
MboII GAAGA 8 cut(s) 248, 382, 401, 436, 625, 766, 1004, 1166
MfeI CAATTG 2 cut(s) 138, 1217
MflI RGATCY 1 cut(s) 363
MhlI GDGCHC 1 cut(s) 771
MlyI GAGTC 2 cut(s) 989, 1105
MmeI TCCRAC 3 cut(s) 874, 983, 1212
MnlI CCTC 4 cut(s) 55, 157, 1112, 1324
MseI TTAA 5 cut(s) 87, 336, 821, 1031, 1062
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 1 cut(s) 32
MunI CAATTG 2 cut(s) 138, 1217
Mva1269I GAATGC 1 cut(s) 23
MvnI CGCG 1 cut(s) 884
MwoI GCNNNNNNNGC 2 cut(s) 143, 941
NcoI CCATGG 1 cut(s) 449
NdeII GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
NlaIII CATG 4 cut(s) 453, 635, 852, 1025
NmuCI GTSAC 3 cut(s) 712, 736, 919
NspI RCATGY 2 cut(s) 635, 852
NspV TTCGAA 1 cut(s) 1241
PciI ACATGT 1 cut(s) 631
PctI GAATGC 1 cut(s) 23
PfeI GAWTC 3 cut(s) 731, 1180, 1339
PkrI GCNGC 3 cut(s) 39, 1105, 1256
PleI GAGTC 2 cut(s) 988, 1105
PmaCI CACGTG 2 cut(s) 580, 929
PmlI CACGTG 2 cut(s) 580, 929
PpsI GAGTC 2 cut(s) 988, 1105
Ppu21I YACGTR 2 cut(s) 580, 929
PscI ACATGT 1 cut(s) 631
PsiI TTATAA 1 cut(s) 972
Psp124BI GAGCTC 1 cut(s) 771
PspCI CACGTG 2 cut(s) 580, 929
PspPI GGNCC 1 cut(s) 485
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 1 cut(s) 363
RsaI GTAC 4 cut(s) 15, 74, 556, 598
RsaNI GTAC 4 cut(s) 14, 73, 555, 597
SacI GAGCTC 1 cut(s) 771
SaqAI TTAA 5 cut(s) 87, 336, 821, 1031, 1062
SatI GCNGC 3 cut(s) 38, 1104, 1255
Sau3AI GATC 9 cut(s) 208, 315, 363, 379, 492, 859, 912, 1165, 1311
Sau96I GGNCC 1 cut(s) 485
ScaI AGTACT 1 cut(s) 74
SchI GAGTC 2 cut(s) 989, 1105
SduI GDGCHC 1 cut(s) 771
SfaNI GCATC 6 cut(s) 64, 148, 634, 922, 1209, 1293
SfcI CTRYAG 1 cut(s) 720
SfuI TTCGAA 1 cut(s) 1241
SinI GGWCC 1 cut(s) 485
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SsiI CCGC 4 cut(s) 146, 161, 882, 1343
SspI AATATT 1 cut(s) 1161
SspMI CTAG 7 cut(s) 203, 348, 386, 431, 479, 608, 830
SstI GAGCTC 1 cut(s) 771
StyI CCWWGG 1 cut(s) 449
TaaI ACNGT 3 cut(s) 414, 660, 1268
TaiI ACGT 4 cut(s) 582, 743, 931, 1132
TaqI TCGA 5 cut(s) 42, 58, 699, 983, 1241
TatI WGTACW 2 cut(s) 13, 72
TfiI GAWTC 3 cut(s) 731, 1180, 1339
Tru1I TTAA 5 cut(s) 87, 336, 821, 1031, 1062
Tru9I TTAA 5 cut(s) 87, 336, 821, 1031, 1062
TscAI CASTG 2 cut(s) 114, 967
TseFI GTSAC 3 cut(s) 712, 736, 919
TseI GCWGC 3 cut(s) 37, 1103, 1254
Tsp45I GTSAC 3 cut(s) 712, 736, 919
TspDTI ATGAA 1 cut(s) 519
TspRI CASTG 2 cut(s) 114, 967
Vha464I CTTAAG 1 cut(s) 86
VpaK11BI GGWCC 1 cut(s) 485
XapI RAATTY 4 cut(s) 338, 571, 1243, 1292
XbaI TCTAGA 1 cut(s) 829
XceI RCATGY 2 cut(s) 635, 852
XspI CTAG 7 cut(s) 203, 348, 386, 431, 479, 608, 830
ZrmI AGTACT 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.