Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012264

Physical Location & Seq

Genomic Coordinates Reverse (-)

2899001 .. 2906160

Gene Structure 7160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGCAGATGGCACAGTTTCTTTCATTGGTTCGAGGTGATTCGATTGAGTCTCCTCGTGAGATTACCTCGCCCAGTAACCTCATCAGCGAGTCCGGTTCGAATGGGTGGCTTATCCGCTTTTTTGATTCTTCCTTCTTCTGTGAGTGGATTGCAGTCAGTTATTTGTACAAGCACCAGCATTCGGGTGTGAGAGATTACTTATGCAATAGGATGTATACGCTTCCTTTATCCGGTATCGAGAGTTATTTGTTCCAGATATGCTACTTGATGGTGCACAAACCAAGTCCCTCACTTGATAAGTTTGTGATAGATATCTGTGCAAAGTCACTTAAGATAGCATTGAAAGTGCATTGGTTTTTGTTGGCGGAACTTGAGGATTCTGATGATAATGAAGGTATTAGTAGGATTCAAGAGAAGTGCCAAATTGCAGCTACTCTGGTGGGTGAGTGGTCGCCTCTTATGCGGCCACATAACGAGCCTTCAACTCCAGGGAGCAAGGTCCTTAATAAGTTTTTGTCATCAAAACAGAAGCTCTTCTCTTTGACTTTATCTCCACCCACCCAGAAGTCTTTACTATTCTCACCTACATCGGGGAGCAACTTGCAGGATGATGGTAGTCAGTTATCTGCGGACGACAATAAGATTTTTAAGAGACTAATCCCAAGTCCTAAAGTTAGAGATGCTTTATTGTTTAGGAAGTCAGCTGACAAAGAAGACGAGGAATGTGAAAAGGATGGATTTTTCAAGAGACTCTTGAGGGACAGCAGAGGTGAGGATGATGAACAAAGGTCAAACTCAGAGGGTTTCTTTAAGCGACTTTTGAAAGACAATAAGTCAGAAGAGGAGGAGATATCAAACAATTCCGAGGGGTTCTTTAAGAGGCTAAGGAGTAGTAAAGGAGATGAAGAGGAATTGACATCGAGTTCAGATGGATTCTTTAAGAGATTGTTACGAGATAATAAAGGAGATGAAGAGGAATTGGGTGCCAACTCGGAGGGTTTCTTCAAGAAGTTATTGCGGGATAGTAAAAATGAAGACGAGGAGCCAAATGCAAACACAGAAGGGTTCTTCAAGAAACTTTTTCATGAGAGCAAGAATGAGGATGATAAAGTTTCTAACGCAGTAGATGATGAGGAAAAAGATGGGTTTCTTAAGAAACTTTTCAAAGAAAAGTTTGATGAGAAAAGAAATGGTAACGAGAGGAATGAGACAGATGAAACCGTGTATACTGACGAAACATCTGGTGAAGATAACGGAAGGGAGGGATTTTTCAAAAAATTGTTTAAAGAGAAGTTTGAAGACAAACCAAACATTGGCAAAGCCGATGATGGGAATGAAAGCGAGGATGACGAATCTTCAGAATTCTCACTGTTCAGAAGATTGTTCCGTAGACATCCAGAAGACGTAAAAACTACTTTACCAAGTGAAAACTGCAGCAATGGCGGTTTTGTTGAAAGCAGTCCTGGGACAGAAAACTTTTTCCGCAAATTGTTCAGAGATCGTGACAGGTCTGTTGAAGATTCTGAACTTTTTGGCTCAAAGAAATATAAGGAGAAGTGTCCAGGTTCACCCAAACCGCAGAATAATACTCCATCTAAAAAGCCCCCTCTACCAAACAATACTGCAGCACAGTTCAGGAAAGGGTCTTACCACGAGTCTTTAGAGTTTGTACATGCATTATGTGAAACGTCATATGATTTGGTAGACATTTTTCCCATTGAAGATCGGAAGACCGCTCTTCGTGAGTCTATTGCAGAGATCAATTCCCATTTAGCTCAGGCTGAAACTACTGGAGGAATCTGTTTTCCAATGGGGAGAGGAGTTTATCGTGTTGTTAATATTCCTGAAGACGAGTATGTTCTTTTGAATTCTAGGGAAAAGGTGCCTTATATGATATGTGTGGAAGTTTTGAAAGCAGAAACACCCTGTGGTGCTAAAACCACATCTACTTCCCTTAAGCTTTCTAAAGGAGGCATTCCACTGGCAAACGGGGATGCATTCTTGCACAAGCCACCTCCATGGGCTTATCCGCTATCTACTGCTCAGGAGGTTTACCGTAACAGTGCAGACCGAATGTCATTATCAACTGTTGAAGCAATTGATCAAGCAATGACTCATAAGTCTGAGGTAAAACTTGTGAATGCATGTCTCTCGGTGGAGACGCATAGTAATTCAAATACCAAATCAGTAAGCAGTGGTGTGACTGGTGTCCTGAGGACTGGTTTGGAAAGTGATCTTGAGTGGGTCAGGCTGGTGCTGACGGCTGATCCAGGTCTTAGAATGGAAAGTATTACTGATCCGAAAACCCCACGTCGAAAGGAACATCGTCGTGTTTCAAGTATAGTTGCCTACGAGGAAGTAAGGGCTGCTGCAGCGAAGGGAGAGGCACCTCCAGGTCTTCCTCTCAAAGGGGCTGGTCAGGATTCATCAGATGCACAACCAATGGCCAATGGTGGCATGCTGAAAGCAGGTGATGCCTTATCTGGTGAATTTTGGGAGGGGAAGCGACTAAGAATTCGTAAAGATTCAATATATGGCAACCTACCAGGTTGGGACTTGCGCTCTATCATTGTGAAGAGCGGTGATGACTGTCGGCAGGAACATCTTGCGGTTCAACTTATATCTCATTTTTTTGATATATTCCAGGAAGCAGGGCTTCCCCTCTGGTTACGTCCTTATGAAGTCTTGGTGACATCTTCATACACTGCCCTTATAGAAACAATTCCAGATACGGCTTCTATTCATTCTATTAAAAGTAGATACCCTAACATCACAAGCCTGCGTGATTTTTTTGATGCCAAGTTTAAAGAGAACTCTCCAAGTTTTAAGCTTGCTCAGAGGAATTTTGTTGAGAGCATGGCTGGATATTCTTTGGTCTGTTACCTTCTGCAGATAAAAGACCGTCATAATGGAAACCTTCTGATGGATGAAGAAGGTCACATTATACACATTGATTTCGGCTTTATGCTTTCAAATTCTCCTGGTGGCGTGAACTTTGAGAGTGCCCCATTTAAGCTAACTCGGGAACTTCTTGAGGTCATGGATTCTGATGCTGAAGGGCTTCCAAGCGAGTTCTTTGACTATTTCAAGGTGCTATGCATTCAAGGATTCCTAACATGTCGAAAACACGCAGAACGGATTATTCTTCTCGTCGAAATGTTACAGGATTCAGGTTTTCCTTGCTTCAAAGGTGGTCCACGCACCATTCAGAATCTAAGAAAAAGGTTCCATTTAAGTTTAACCGAAGAGCAATGCGTCTCTTTGGTGCTCTCTCTAATCAGCAGCAGCTTAGATGCTTGGCGAACTCGACAATACGATTACTACCAAAGGGTGTTGAATGGAATACGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004430 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012506 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0030154 GO:0030258 GO:0030659 GO:0031090 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032989 GO:0035556 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0048015 GO:0048017 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051716 GO:0052742 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0071840 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

PI3_PI4_kinase

Protein Analysis

1116

Amino Acids

126.24

Weight (kDa)

5.57

Isoelectric Point (pI)

45.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI4KB-PIK1_PIK	PF21245	50 - 120	2.7e-11	PI4KB/PIK1, accessory (PIK) domain
PI3_PI4_kinase	PF00454	856 - 1063	1.8e-38	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09350 AT5G64070 AT5G64070
fragaria_vesca	FvH4_1g24240
malus_domestica	MD09G1261800.v1.1 MD17G1256600.v1.1
prunus_persica	Prupe.3G159200_v2.0.a1 Prupe.3G159200_v2.0.a1 Prupe.3G159200_v2.0.a1
pyrus_communis	pycom09g17610 pycom17g25880
rosa_chinensis	RchiOBHm_Chr2g0120731
rosa_laevigata	RLG00000018575
rosa_multiflora	Rmu_sc0000319.1_g000011
rosa_roxburghii	Rroxscaffold_2G00123200
rosa_rugosa	Rorug02G0230500
rosa_samantha	Rh2BG298500 Rh2CG276200
rosa_wichuraiana	Rw2G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2459
AasI	GACNNNNNNGTC	1 cut(s)	2119
Acc36I	ACCTGC	1 cut(s)	2459
AccB1I	GGYRCC	3 cut(s)	983, 1882, 2386
AccB7I	CCANNNNNTGG	1 cut(s)	1313
AccBSI	CCGCTC	2 cut(s)	1736, 2580
AccI	GTMKAC	4 cut(s)	215, 1226, 1390, 1704
AclWI	GGATC	2 cut(s)	2261, 2291
AcoI	YGGCCR	2 cut(s)	464, 2445
AcsI	RAATTY	6 cut(s)	1361, 1867, 2489, 2514, 2842, 2974
AcuI	CTGAAG	3 cut(s)	1341, 1866, 3075
AdeI	CACNNNGTG	1 cut(s)	1928
AfaI	GTAC	2 cut(s)	167, 1671
AfiI	CCNNNNNNNGG	7 cut(s)	181, 230, 590, 1313, 1329, 2408, 2923
AflII	CTTAAG	3 cut(s)	329, 1151, 1955
AflIII	ACRYGT	1 cut(s)	3116
AhdI	GACNNNNNGTC	2 cut(s)	832, 2074
AjiI	CACGTC	1 cut(s)	2312
AjnI	CCWGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
AluBI	AGCT	8 cut(s)	431, 532, 704, 1775, 1960, 2830, 3016, 3288
AluI	AGCT	8 cut(s)	431, 532, 704, 1775, 1960, 2830, 3016, 3288
Alw21I	GWGCWC	2 cut(s)	276, 3270
Alw26I	GTCTC	7 cut(s)	54, 646, 742, 1202, 2153, 2153, 3262
Alw44I	GTGCAC	1 cut(s)	272
AlwI	GGATC	2 cut(s)	2261, 2291
Ama87I	CYCGRG	1 cut(s)	3021
AoxI	GGCC	2 cut(s)	464, 2445
ApaLI	GTGCAC	1 cut(s)	272
ApeKI	GCWGC	8 cut(s)	428, 1434, 1625, 2366, 2369, 2372, 3282, 3285
ApoI	RAATTY	6 cut(s)	1361, 1867, 2489, 2514, 2842, 2974
ArsI	GACNNNNNNTTYG	2 cut(s)	2499, 2531
Asp700I	GAANNNNTTC	4 cut(s)	533, 1160, 2721, 3060
AspLEI	GCGC	1 cut(s)	2562
AspS9I	GGNCC	2 cut(s)	499, 3194
AsuII	TTCGAA	1 cut(s)	98
AvaI	CYCGRG	1 cut(s)	3021
AvaII	GGWCC	2 cut(s)	499, 3194
AxyI	CCTNAGG	1 cut(s)	2213
BaeGI	GKGCMC	2 cut(s)	276, 3007
BalI	TGGCCA	1 cut(s)	2447
BanI	GGYRCC	3 cut(s)	983, 1882, 2386
BauI	CACGAG	2 cut(s)	54, 1652
BbsI	GAAGAC	7 cut(s)	720, 1041, 1305, 1407, 1736, 1854, 2390
Bbv12I	GWGCWC	2 cut(s)	276, 3270
BbvI	GCAGC	8 cut(s)	440, 1446, 1637, 2353, 2356, 2384, 3294, 3297
BccI	CCATC	8 cut(s)	262, 605, 728, 923, 1136, 1322, 1600, 2917
BceAI	ACGGC	2 cut(s)	2277, 2748
BcgI	CGANNNNNNTGC	2 cut(s)	2133, 2167
BciT130I	CCWGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
BclI	TGATCA	1 cut(s)	2101
BcoDI	GTCTC	7 cut(s)	54, 646, 742, 1202, 2153, 2153, 3262
BfaI	CTAG	1 cut(s)	1872
BfmI	CTRYAG	4 cut(s)	1432, 1623, 2370, 2888
BfrI	CTTAAG	3 cut(s)	329, 1151, 1955
BfuAI	ACCTGC	1 cut(s)	2459
BisI	GCNGC	9 cut(s)	429, 464, 1435, 1626, 2367, 2370, 2373, 3283, 3286
BlsI	GCNGC	9 cut(s)	430, 465, 1436, 1627, 2368, 2371, 2374, 3284, 3287
Bme1390I	CCNGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
Bme18I	GGWCC	2 cut(s)	499, 3194
BmeRI	GACNNNNNGTC	2 cut(s)	832, 2074
BmeT110I	CYCGRG	1 cut(s)	3021
BmgBI	CACGTC	1 cut(s)	2312
BmgT120I	GGNCC	2 cut(s)	499, 3194
BmiI	GGNNCC	5 cut(s)	985, 1044, 1884, 2388, 3227
BmrFI	CCNGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
BmrI	ACTGGG	1 cut(s)	66
BmsI	GCATC	7 cut(s)	670, 1984, 2422, 2464, 2785, 3040, 3283
BmuI	ACTGGG	1 cut(s)	66
BoxI	GACNNNNGTC	1 cut(s)	2207
BpiI	GAAGAC	7 cut(s)	720, 1041, 1305, 1407, 1736, 1854, 2390
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	3 cut(s)	471, 1812, 2376
Bpu10I	CCTNAGC	3 cut(s)	884, 1776, 2043
Bpu14I	TTCGAA	1 cut(s)	98
BpuEI	CTTGAG	4 cut(s)	392, 775, 2258, 3053
BsaBI	GATNNNNATC	1 cut(s)	311
BsaJI	CCNNGG	4 cut(s)	488, 864, 1463, 2018
BsaWI	WCCGGW	2 cut(s)	92, 230
BsaXI	ACNNNNNCTCC	2 cut(s)	535, 565
Bsc4I	CCNNNNNNNGG	7 cut(s)	181, 230, 590, 1313, 1329, 2408, 2923
Bse1I	ACTGG	5 cut(s)	72, 1795, 1986, 2209, 2224
Bse21I	CCTNAGG	1 cut(s)	2213
Bse3DI	GCAATG	3 cut(s)	1444, 2115, 3257
Bse8I	GATNNNNATC	1 cut(s)	311
BseBI	CCWGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
BseDI	CCNNGG	4 cut(s)	488, 864, 1463, 2018
BseGI	GGATG	9 cut(s)	216, 613, 739, 781, 1108, 1351, 1393, 1999, 2932
BseJI	GATNNNNATC	1 cut(s)	311
BseLI	CCNNNNNNNGG	7 cut(s)	181, 230, 590, 1313, 1329, 2408, 2923
BseMI	GCAATG	3 cut(s)	1444, 2115, 3257
BseMII	CTCAG	6 cut(s)	810, 1790, 2057, 2115, 2204, 2849
BseNI	ACTGG	5 cut(s)	72, 1795, 1986, 2209, 2224
BseRI	GAGGAG	5 cut(s)	42, 857, 860, 1055, 1833
BseSI	GKGCMC	2 cut(s)	276, 3007
BseXI	GCAGC	8 cut(s)	440, 1446, 1637, 2353, 2356, 2384, 3294, 3297
BsgI	GTGCAG	1 cut(s)	2085
BshFI	GGCC	2 cut(s)	466, 2447
BshNI	GGYRCC	3 cut(s)	983, 1882, 2386
BsiHKAI	GWGCWC	2 cut(s)	276, 3270
BsiHKCI	CYCGRG	1 cut(s)	3021
BsiSI	CCGG	2 cut(s)	93, 231
BslFI	GGGAC	4 cut(s)	270, 773, 1480, 2567
BslI	CCNNNNNNNGG	7 cut(s)	181, 230, 590, 1313, 1329, 2408, 2923
BsmAI	GTCTC	7 cut(s)	54, 646, 742, 1202, 2153, 2153, 3262
BsmBI	CGTCTC	2 cut(s)	2153, 3262
BsmFI	GGGAC	4 cut(s)	270, 773, 1480, 2567
BsmI	GAATGC	5 cut(s)	178, 1974, 1997, 2146, 3099
BsnI	GGCC	2 cut(s)	466, 2447
BsoBI	CYCGRG	1 cut(s)	3021
Bsp119I	TTCGAA	1 cut(s)	98
Bsp1286I	GDGCHC	3 cut(s)	276, 3007, 3270
Bsp1407I	TGTACA	2 cut(s)	165, 1669
Bsp143I	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
Bsp19I	CCATGG	1 cut(s)	2018
BspANI	GGCC	2 cut(s)	466, 2447
BspCNI	CTCAG	6 cut(s)	809, 1789, 2056, 2116, 2205, 2848
BspHI	TCATGA	1 cut(s)	1084
BspLI	GGNNCC	5 cut(s)	985, 1044, 1884, 2388, 3227
BspMAI	CTGCAG	4 cut(s)	1436, 1627, 2374, 2892
BspMI	ACCTGC	1 cut(s)	2459
BspPI	GGATC	2 cut(s)	2261, 2291
BspQI	GCTCTTC	4 cut(s)	539, 1743, 2570, 3240
BspT104I	TTCGAA	1 cut(s)	98
BspT107I	GGYRCC	3 cut(s)	983, 1882, 2386
BspTI	CTTAAG	3 cut(s)	329, 1151, 1955
BsrBI	CCGCTC	2 cut(s)	1736, 2580
BsrDI	GCAATG	3 cut(s)	1444, 2115, 3257
BsrGI	TGTACA	2 cut(s)	165, 1669
BsrI	ACTGG	5 cut(s)	72, 1795, 1986, 2209, 2224
BssECI	CCNNGG	4 cut(s)	488, 864, 1463, 2018
BssMI	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
BssNAI	GTATAC	2 cut(s)	216, 1227
BssSI	CACGAG	2 cut(s)	54, 1652
BssT1I	CCWWGG	1 cut(s)	2018
Bst1107I	GTATAC	2 cut(s)	216, 1227
Bst2BI	CACGAG	2 cut(s)	54, 1652
Bst2UI	CCWGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
Bst4CI	ACNGT	9 cut(s)	15, 1222, 1371, 1632, 2057, 2063, 2089, 2591, 2903
Bst6I	CTCTTC	7 cut(s)	539, 834, 900, 966, 1743, 2570, 3240
BstAFI	CTTAAG	3 cut(s)	329, 1151, 1955
BstAPI	GCANNNNNTGC	1 cut(s)	2474
BstAUI	TGTACA	2 cut(s)	165, 1669
BstBI	TTCGAA	1 cut(s)	98
BstC8I	GCNNGC	3 cut(s)	2459, 2780, 2832
BstDSI	CCRYGG	1 cut(s)	2018
BstENI	CCTNNNNNAGG	1 cut(s)	2406
BstF5I	GGATG	9 cut(s)	216, 613, 739, 781, 1108, 1351, 1393, 1999, 2932
BstHHI	GCGC	1 cut(s)	2562
BstKTI	GATC	7 cut(s)	1501, 1726, 1761, 2104, 2236, 2269, 2299
BstMAI	GTCTC	7 cut(s)	54, 646, 742, 1202, 2153, 2153, 3262
BstMBI	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
BstMWI	GCNNNNNNNGC	4 cut(s)	460, 1440, 2372, 2474
BstNI	CCWGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
BstNSI	RCATGY	4 cut(s)	1676, 2148, 2461, 3120
BstPAI	GACNNNNGTC	1 cut(s)	2207
BstSCI	CCNGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
BstSFI	CTRYAG	4 cut(s)	1432, 1623, 2370, 2888
BstSLI	GKGCMC	2 cut(s)	276, 3007
BstV1I	GCAGC	8 cut(s)	440, 1446, 1637, 2353, 2356, 2384, 3294, 3297
BstV2I	GAAGAC	7 cut(s)	720, 1041, 1305, 1407, 1736, 1854, 2390
BstXI	CCANNNNNNTGG	1 cut(s)	2019
BstZ17I	GTATAC	2 cut(s)	216, 1227
Bsu36I	CCTNAGG	1 cut(s)	2213
BsuRI	GGCC	2 cut(s)	466, 2447
BtgI	CCRYGG	1 cut(s)	2018
BtrI	CACGTC	1 cut(s)	2312
BtsCI	GGATG	9 cut(s)	216, 613, 739, 781, 1108, 1351, 1393, 1999, 2932
BtsI	GCAGTG	2 cut(s)	2200, 2703
BtsIMutI	CAGTG	5 cut(s)	1367, 1979, 2068, 2200, 2703
BveI	ACCTGC	1 cut(s)	2459
Cac8I	GCNNGC	3 cut(s)	2459, 2780, 2832
CciI	TCATGA	1 cut(s)	1084
CfoI	GCGC	1 cut(s)	2562
Cfr13I	GGNCC	2 cut(s)	499, 3194
CseI	GACGC	2 cut(s)	2170, 3244
CsiI	ACCWGGT	1 cut(s)	2545
Csp6I	GTAC	2 cut(s)	166, 1670
CviAII	CATG	8 cut(s)	1085, 1673, 2019, 2145, 2458, 2857, 3040, 3117
CviQI	GTAC	2 cut(s)	166, 1670
DpnI	GATC	7 cut(s)	1500, 1725, 1760, 2103, 2235, 2268, 2298
DpnII	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
DraI	TTTAAA	2 cut(s)	1285, 2806
DraIII	CACNNNGTG	1 cut(s)	1928
DrdI	GACNNNNNNGTC	1 cut(s)	2119
DriI	GACNNNNNGTC	2 cut(s)	832, 2074
DseDI	GACNNNNNNGTC	1 cut(s)	2119
EaeI	YGGCCR	2 cut(s)	464, 2445
Eam1104I	CTCTTC	7 cut(s)	539, 834, 900, 966, 1743, 2570, 3240
Eam1105I	GACNNNNNGTC	2 cut(s)	832, 2074
EarI	CTCTTC	7 cut(s)	539, 834, 900, 966, 1743, 2570, 3240
EciI	GGCGGA	1 cut(s)	380
Eco130I	CCWWGG	1 cut(s)	2018
Eco32I	GATATC	2 cut(s)	313, 852
Eco47I	GGWCC	2 cut(s)	499, 3194
Eco57I	CTGAAG	3 cut(s)	1341, 1866, 3075
Eco81I	CCTNAGG	1 cut(s)	2213
Eco88I	CYCGRG	1 cut(s)	3021
EcoNI	CCTNNNNNAGG	1 cut(s)	2406
EcoO109I	RGGNCCY	1 cut(s)	499
EcoRI	GAATTC	3 cut(s)	1361, 1867, 2514
EcoRII	CCWGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
EcoRV	GATATC	2 cut(s)	313, 852
EcoT14I	CCWWGG	1 cut(s)	2018
EcoT22I	ATGCAT	4 cut(s)	1678, 1999, 2146, 3101
ErhI	CCWWGG	1 cut(s)	2018
Esp3I	CGTCTC	2 cut(s)	2153, 3262
FaeI	CATG	8 cut(s)	1088, 1676, 2022, 2148, 2461, 2860, 3043, 3120
FalI	AAGNNNNNCTT	4 cut(s)	737, 769, 2640, 2672
FaqI	GGGAC	4 cut(s)	270, 773, 1480, 2567
FatI	CATG	8 cut(s)	1084, 1672, 2018, 2144, 2457, 2856, 3039, 3116
FauI	CCCGC	1 cut(s)	1011
FauNDI	CATATG	1 cut(s)	1693
FbaI	TGATCA	1 cut(s)	2101
FblI	GTMKAC	4 cut(s)	215, 1226, 1390, 1704
Fnu4HI	GCNGC	9 cut(s)	429, 464, 1435, 1626, 2367, 2370, 2373, 3283, 3286
FokI	GGATG	9 cut(s)	223, 620, 746, 788, 1115, 1358, 1380, 2006, 2939
Fsp4HI	GCNGC	9 cut(s)	429, 464, 1435, 1626, 2367, 2370, 2373, 3283, 3286
FspBI	CTAG	1 cut(s)	1872
GlaI	GCGC	1 cut(s)	2561
GluI	GCNGC	9 cut(s)	429, 464, 1435, 1626, 2367, 2370, 2373, 3283, 3286
GsuI	CTGGAG	3 cut(s)	471, 1812, 2376
HaeIII	GGCC	2 cut(s)	466, 2447
HapII	CCGG	2 cut(s)	93, 231
HgaI	GACGC	2 cut(s)	2170, 3244
HhaI	GCGC	1 cut(s)	2562
Hin1II	CATG	8 cut(s)	1088, 1676, 2022, 2148, 2461, 2860, 3043, 3120
Hin6I	GCGC	1 cut(s)	2560
HinP1I	GCGC	1 cut(s)	2560
HindIII	AAGCTT	2 cut(s)	1958, 2828
HpaII	CCGG	2 cut(s)	93, 231
Hpy166II	GTNNAC	9 cut(s)	216, 274, 1227, 1391, 1568, 1705, 2053, 2992, 3197
Hpy8I	GTNNAC	9 cut(s)	216, 274, 1227, 1391, 1568, 1705, 2053, 2992, 3197
Hpy99I	CGWCG	3 cut(s)	2316, 2331, 3155
HpyCH4III	ACNGT	9 cut(s)	15, 1222, 1371, 1632, 2057, 2063, 2089, 2591, 2903
HpyCH4IV	ACGT	4 cut(s)	1404, 1688, 2311, 2671
HpyF10VI	GCNNNNNNNGC	4 cut(s)	460, 1440, 2372, 2474
HpySE526I	ACGT	4 cut(s)	1404, 1688, 2311, 2671
Hsp92II	CATG	8 cut(s)	1088, 1676, 2022, 2148, 2461, 2860, 3043, 3120
HspAI	GCGC	1 cut(s)	2560
Ksp22I	TGATCA	1 cut(s)	2101
Kzo9I	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
LguI	GCTCTTC	4 cut(s)	539, 1743, 2570, 3240
LmnI	GCTCC	3 cut(s)	492, 594, 1042
Lsp1109I	GCAGC	8 cut(s)	440, 1446, 1637, 2353, 2356, 2384, 3294, 3297
LweI	GCATC	7 cut(s)	670, 1984, 2422, 2464, 2785, 3040, 3283
MabI	ACCWGGT	1 cut(s)	2545
MaeI	CTAG	1 cut(s)	1872
MaeII	ACGT	4 cut(s)	1404, 1688, 2311, 2671
MalI	GATC	7 cut(s)	1500, 1725, 1760, 2103, 2235, 2268, 2298
MbiI	CCGCTC	2 cut(s)	1736, 2580
MboI	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
MfeI	CAATTG	1 cut(s)	2097
MhlI	GDGCHC	3 cut(s)	276, 3007, 3270
MlsI	TGGCCA	1 cut(s)	2447
MluNI	TGGCCA	1 cut(s)	2447
MlyI	GAGTC	6 cut(s)	56, 98, 744, 1664, 1754, 2107
Mox20I	TGGCCA	1 cut(s)	2447
Mph1103I	ATGCAT	4 cut(s)	1678, 1999, 2146, 3101
MroXI	GAANNNNTTC	4 cut(s)	533, 1160, 2721, 3060
MscI	TGGCCA	1 cut(s)	2447
MslI	CAYNNNNRTG	3 cut(s)	183, 2017, 2328
Msp20I	TGGCCA	1 cut(s)	2447
MspA1I	CMGCKG	1 cut(s)	704
MspCI	CTTAAG	3 cut(s)	329, 1151, 1955
MspI	CCGG	2 cut(s)	93, 231
MspR9I	CCNGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
MunI	CAATTG	1 cut(s)	2097
Mva1269I	GAATGC	5 cut(s)	178, 1974, 1997, 2146, 3099
MvaI	CCWGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
MwoI	GCNNNNNNNGC	4 cut(s)	460, 1440, 2372, 2474
NcoI	CCATGG	1 cut(s)	2018
NdeI	CATATG	1 cut(s)	1693
NdeII	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
NlaIII	CATG	8 cut(s)	1088, 1676, 2022, 2148, 2461, 2860, 3043, 3120
NlaIV	GGNNCC	5 cut(s)	985, 1044, 1884, 2388, 3227
NmuCI	GTSAC	5 cut(s)	324, 1502, 2200, 2689, 2936
NsiI	ATGCAT	4 cut(s)	1678, 1999, 2146, 3101
NspI	RCATGY	4 cut(s)	1676, 2148, 2461, 3120
NspV	TTCGAA	1 cut(s)	98
PaeI	GCATGC	1 cut(s)	2461
PagI	TCATGA	1 cut(s)	1084
PaqCI	CACCTGC	1 cut(s)	2459
PciI	ACATGT	1 cut(s)	3116
PciSI	GCTCTTC	4 cut(s)	539, 1743, 2570, 3240
PctI	GAATGC	5 cut(s)	178, 1974, 1997, 2146, 3099
PdmI	GAANNNNTTC	4 cut(s)	533, 1160, 2721, 3060
PflMI	CCANNNNNTGG	1 cut(s)	1313
PfoI	TCCNGGA	1 cut(s)	2643
PkrI	GCNGC	9 cut(s)	430, 465, 1436, 1627, 2368, 2371, 2374, 3284, 3287
PleI	GAGTC	6 cut(s)	55, 97, 744, 1663, 1753, 2107
PpsI	GAGTC	6 cut(s)	55, 97, 744, 1663, 1753, 2107
PpuMI	RGGWCCY	1 cut(s)	499
PscI	ACATGT	1 cut(s)	3116
PshAI	GACNNNNGTC	1 cut(s)	2207
Psp5II	RGGWCCY	1 cut(s)	499
Psp6I	CCWGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
PspGI	CCWGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
PspN4I	GGNNCC	5 cut(s)	985, 1044, 1884, 2388, 3227
PspPI	GGNCC	2 cut(s)	499, 3194
PspPPI	RGGWCCY	1 cut(s)	499
PstI	CTGCAG	4 cut(s)	1436, 1627, 2374, 2892
PvuII	CAGCTG	1 cut(s)	704
RsaI	GTAC	2 cut(s)	167, 1671
RsaNI	GTAC	2 cut(s)	166, 1670
RseI	CAYNNNNRTG	3 cut(s)	183, 2017, 2328
SapI	GCTCTTC	4 cut(s)	539, 1743, 2570, 3240
SatI	GCNGC	9 cut(s)	429, 464, 1435, 1626, 2367, 2370, 2373, 3283, 3286
Sau3AI	GATC	7 cut(s)	1498, 1723, 1758, 2101, 2233, 2266, 2296
Sau96I	GGNCC	2 cut(s)	499, 3194
SchI	GAGTC	6 cut(s)	56, 98, 744, 1664, 1754, 2107
ScrFI	CCNGG	8 cut(s)	489, 1464, 1563, 2271, 2394, 2547, 2645, 2982
SduI	GDGCHC	3 cut(s)	276, 3007, 3270
SexAI	ACCWGGT	1 cut(s)	2545
SfaNI	GCATC	7 cut(s)	670, 1984, 2422, 2464, 2785, 3040, 3283
SfcI	CTRYAG	4 cut(s)	1432, 1623, 2370, 2888
SfuI	TTCGAA	1 cut(s)	98
SinI	GGWCC	2 cut(s)	499, 3194
SmiMI	CAYNNNNRTG	3 cut(s)	183, 2017, 2328
SmlI	CTYRAG	7 cut(s)	329, 371, 754, 1151, 1955, 2237, 3032
SmoI	CTYRAG	7 cut(s)	329, 371, 754, 1151, 1955, 2237, 3032
SphI	GCATGC	1 cut(s)	2461
SspI	AATATT	1 cut(s)	1840
SspMI	CTAG	1 cut(s)	1872
StyD4I	CCNGG	8 cut(s)	487, 1462, 1561, 2269, 2392, 2545, 2643, 2980
StyI	CCWWGG	1 cut(s)	2018
TaaI	ACNGT	9 cut(s)	15, 1222, 1371, 1632, 2057, 2063, 2089, 2591, 2903
TaiI	ACGT	4 cut(s)	1407, 1691, 2314, 2674
TaqI	TCGA	9 cut(s)	31, 41, 98, 237, 920, 2314, 3121, 3153, 3307
TaqII	GACCGA	1 cut(s)	2085
TatI	WGTACW	2 cut(s)	165, 1669
TauI	GCSGC	1 cut(s)	466
TscAI	CASTG	5 cut(s)	1374, 1986, 2068, 2200, 2710
TseFI	GTSAC	5 cut(s)	324, 1502, 2200, 2689, 2936
TseI	GCWGC	8 cut(s)	428, 1434, 1625, 2366, 2369, 2372, 3282, 3285
Tsp45I	GTSAC	5 cut(s)	324, 1502, 2200, 2689, 2936
TspGWI	ACGGA	3 cut(s)	1269, 1376, 3151
TspRI	CASTG	5 cut(s)	1374, 1986, 2068, 2200, 2710
Van91I	CCANNNNNTGG	1 cut(s)	1313
Vha464I	CTTAAG	3 cut(s)	329, 1151, 1955
VneI	GTGCAC	1 cut(s)	272
VpaK11BI	GGWCC	2 cut(s)	499, 3194
XagI	CCTNNNNNAGG	1 cut(s)	2406
XapI	RAATTY	6 cut(s)	1361, 1867, 2489, 2514, 2842, 2974
XceI	RCATGY	4 cut(s)	1676, 2148, 2461, 3120
XmiI	GTMKAC	4 cut(s)	215, 1226, 1390, 1704
XmnI	GAANNNNTTC	4 cut(s)	533, 1160, 2721, 3060
XspI	CTAG	1 cut(s)	1872
Zsp2I	ATGCAT	4 cut(s)	1678, 1999, 2146, 3101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.