Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011804

Physical Location & Seq

Genomic Coordinates Forward (+)

3536189 .. 3541149

Gene Structure 4961 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G11110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGGTGGGAAACGACTGGGTGAATAGTTACCTGGAGGCGATTCTCGCAGCCGAACCTGGAATCGCCAATTCCAAACCGCCTGGAACCGGCGATTCCAAATCGTCTCTTCTGCTGAGAGAGCGTGGCCATTTCAGTCCCACTCGTTATTTCGTTGAAGAGGTTATCACAGGCTTTGATGAGACTGATCTTCACCGTTCCTGGGTTCAGGCTGCTGCAACCAGGAGTCCGCAAGAGCGTAACACAAGGTTGGAGAATTTGTGCTGGAGGATCTGGAATTTGGCTCGCCAGAAGAAGCAGGTTGAAGGGAAGAATGCTAAGCGTGAAGCTAAAAGGGAGCGTGAGCGTGAGAAAGCAAGGAGGGAAGTAACTGCTGAAATGTCTGAAGATTTCTCTGAAGGAGAGAAGGCAGATTTGCCTGGTGAAATCCCAACTCCTAGTGATAACAACACCAAAGGAAGAATGTCTCGGATTAGTTCTGTTGATGTCTTTGAGAATTGGTTTGCTCAACACAAAGAGAAAAAGCTTTACATCGTGTTAATAAGTCTTCATGGTTTGATACGTGGTGAAAACATGGAGCTTGGTCGCGATTCTGATACTGGTGGCCAGGTGAAGTATGTTGTGGAACTTGCAAGGGCATTAGGCTCAATGCCAGGAGTCTATCGTGTTGATTTGTTGACCAGACAGGTCACCGCGCCAGATGTGGATTCCAGCTACTCTGAACCGTCTGAGATGTTAAATCCTATAGACACAGATATAGAGCAGGAGAATGGAGAGAGTAGTGGCGCTTATATAATCCGTATTCCTTTTGGCCCGAAAGATAAATATGTACCAAAAGAGCTCCTCTGGCCTCATATCCCTGAATTTGTTGATAGGGCACTTAGCCATATTATGCAGATTTCAAAGGTTCTTGGTGAGCAAATTGGTGGTGGACAACAAGTATGGCCAGTTTCTATTCACGGGCATTATGCAGATGCTGGTGATTCCACTGCTCTTTTATCTGGGGCTCTGAATGTACCAATGGTTTTTACTGGGCATTCTCTTGGTCGTGATAAGCTTGAGCAACTCCTGAAACAAGGACGGCCAAAAGAAGAAATCAATTCCAACTACAAGATATGGAGACGGATAGAGGCAGAGGAGTTATGTCTTGATGCTTCTGAGATTGTCATAACTAGTACAAGGCAAGAGGTAGACGAGCAATGGCGCCTTTATGATGGTTTTGATCCGGTTTTGGAGCGAAAACTCAGAGCAAGAATGAAAAGGGGTGTGAGTTGTCTAGGCAGATTTATGCCTCGCATGGTTGTTATTCCTCCAGGAATGGAATTTCATCACATTGTACCACATGATGTGGATGCAGATGGAGATGATGAAAATCCACAAACTGCTGATCCACCAATTTGGTCTGAGATTATGCGCTTCTTCTCTAACCCGCGCAAGCCTATGATTCTCGCTCTTGCTCGGCCAGACCCTAAAAAGAACTTGGTTACTCTAGTCAAAGCCTTTGGAGAATGCCGTCCATTACGGGAGCTTGCGAACCTTACATTGATAATGGGAAATCGAAATGATATTGATGAGTTGTCCTCCACGAATTCCTCTGTGCTGCTCTCAATTCTGAAGCTAATAGACAAGTACGACTTATACGGTCAAGTGGCAATGCCTAAGCATCACCAACAATCTGATGTGCCTGAAATTTACCGTTTGGCAGCCAAAACAAAGGGAGTATTTATAAATCCAGCGTTCATCGAACCATTTGGACTGACTCTAATCGAGGCAGGAGCTCATGGGCTCCCCACTGTTGCAACAATTAATGGAGGACCTGTCGATATACATCGGGTTCTTGACAATGGTCTTCTAGTTGATCCTCATGATCAGCAAGCTATAGCTGATGCGCTCCTGAAACTAGTTTCTGACAGACAGCTATGGGGAAGATGCAGACAAAATGGCCTAAATAACATTCACCTGTTTTCATGGCCAGAGCACTGCAAAACATATTTGGCTCGGATAGCTTCGTGCAAGCAAAGACATCCTAAATGGCAGAGAGTTGAGTTTGAGAACTCAGACTCCGATTCACCCAGCGACTCTCTTAGAGATATAAATGACATCTCCTTGAATCTAAAACTTTCCTTAGATGGCGAAAAGAGTGGAAGTAACAATGGTGTAGATACTAACTTAGATGCTGAAGACAGAGCTGCTGAACGTAAAGCTGAGGTAGAGAAAGCTGTTTCAACCTTGGCACAAAAGAGCAAACCAACAGAGAAATTTGATTCCAAGATGCCTACTTTGAAAAGACGGAAAAATATATTTGTCATTTCTGTGGACTGTAGCGCAACCTCAGATCTTCTTGCAGTGGTGAAAACAGTTATTGATGCTGCAGGAAGAGGCAGTTCAACAGGATTCATTCTCTCAACCTCAATGACAATATCTGAGACTCACACAGCACTGCTTTCAGGAGGGTTGAAACCACAAGATTTTGATGCTGTTATTTGCAGCAGTGGAAGTGAACTCTACTTCACGTCCTCTGGTTCAGAGGATAAGACCGCACTTCCTTATACACTCGATGCAGATTACCATTCCCATATAGAATTCCGCTGGGGTGGAGAGAGCTTGAGGAAGACTTTGATCCGTTGGATTAGTTCTGTTGAAGAGAAGAAAAAGACGAAAAAAGGAGAGATTTTAGTTGAAGACGAGTCTTCTTCTACCAACTATTGCCTATCCTTCAAAGTGAAAGATCCCGCTTTGATGCCTCCAATGAAAGAGCTGAGGAAATTGATGAGAAATCAAGCATTACGTTGCAATGCAGTTTACTGCCAAAATGGAGCTAGGCTTAATGTAATCCCTGTTCTTGCATCACGATCTCAGGCCCTTAGGTATTTGCTAGTGCGATGGGGCATTGACTTATCGAACATGGTGGTGTTCGTGGGAGATTCAGGTGACACGGATTACGAAGGCTTGCTTGGAGGAATTCACAAAACAGTGATACTTAAAGGCTTAGCCAGTGACTTGCGTGAGCAACCCGGCAACAGAAGCTACCCAATGGAGGATGTGACTCCACTGAACAGTCCCAACATCACCGAGGCTAAAGAATGTGGTCGTGACGCCATTAAGGTCGCTCTAGAGAAGCTTGGGATCAGTCTCCTCAAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0008150 GO:0008194 GO:0009506 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010927 GO:0016020 GO:0016043 GO:0016740 GO:0016757 GO:0016758 GO:0022607 GO:0030054 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0035251 GO:0043062 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046524 GO:0046527 GO:0046903 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055044 GO:0071836 GO:0071840 GO:0071944 GO:0085029

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 S6PP Sucrose_synth

Protein Analysis

1047

Amino Acids

116.96

Weight (kDa)

6.18

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GT-B_Sucrose_synth	PF00862	175 - 442	5.3e-09	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	474 - 647	9.1e-22	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	479 - 636	8.7e-14	Glycosyl transferases group 1
S6PP	PF05116	780 - 981	6.7e-14	Sucrose-6F-phosphate phosphohydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11110
fragaria_vesca	FvH4_2g28820 FvH4_2g28820
malus_domestica	MD08G1157000.v1.1 MD15G1127900.v1.1
prunus_persica	Prupe.1G483200_v2.0.a1 Prupe.1G483200_v2.0.a1
pyrus_communis	pycom08g12930 pycom15g11500
rosa_chinensis	RchiOBHm_Chr6g0297571
rosa_laevigata	RLG00000011582
rosa_roxburghii	Rroxscaffold_7G00170350
rosa_rugosa	Rorug06G0273700 Rorug06G0273800 Rorug06G0273800
rosa_samantha	Rh6BG392800 Rh6CG398600 Rh6DG385200
rosa_wichuraiana	Rw6G033510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1724
Acc36I	ACCTGC	1 cut(s)	286
AccB1I	GGYRCC	1 cut(s)	1200
AccI	GTMKAC	1 cut(s)	1188
AccII	CGCG	3 cut(s)	585, 692, 1429
AciI	CCGC	7 cut(s)	77, 227, 690, 1427, 2535, 2584, 2730
AclWI	GGATC	7 cut(s)	275, 1214, 1379, 1850, 2611, 2720, 3131
AcoI	YGGCCR	6 cut(s)	124, 601, 941, 1079, 1457, 1967
AcsI	RAATTY	9 cut(s)	253, 274, 860, 1319, 1585, 1686, 2255, 2579, 2958
AcuI	CTGAAG	4 cut(s)	402, 414, 1631, 2196
AcyI	GRCGYC	2 cut(s)	1201, 3093
AfaI	GTAC	5 cut(s)	828, 1014, 1174, 1335, 1628
AfiI	CCNNNNNNNGG	3 cut(s)	86, 199, 3034
AhlI	ACTAGT	2 cut(s)	1169, 1897
AjiI	CACGTC	1 cut(s)	2511
AjnI	CCWGG	9 cut(s)	30, 55, 79, 197, 218, 415, 603, 649, 1309
AjuI	GAANNNNNNNTTGG	2 cut(s)	2934, 2966
AloI	GAACNNNNNNTCC	2 cut(s)	2042, 2074
Alw21I	GWGCWC	3 cut(s)	840, 1777, 1977
Alw26I	GTCTC	6 cut(s)	108, 173, 468, 1111, 2417, 3134
AlwI	GGATC	7 cut(s)	275, 1214, 1379, 1850, 2611, 2720, 3131
AlwNI	CAGNNNCTG	1 cut(s)	974
ApeKI	GCWGC	8 cut(s)	47, 209, 212, 1597, 1700, 2186, 2366, 2484
ApoI	RAATTY	9 cut(s)	253, 274, 860, 1319, 1585, 1686, 2255, 2579, 2958
AseI	ATTAAT	1 cut(s)	1803
AspLEI	GCGC	7 cut(s)	694, 785, 1203, 1413, 1431, 1888, 2324
AspS9I	GGNCC	3 cut(s)	809, 1811, 2857
AsuC2I	CCSGG	1 cut(s)	3012
AvaII	GGWCC	1 cut(s)	1811
AxyI	CCTNAGG	1 cut(s)	2861
BaeGI	GKGCMC	1 cut(s)	877
BalI	TGGCCA	4 cut(s)	126, 603, 943, 1969
BanI	GGYRCC	1 cut(s)	1200
BanII	GRGCYC	4 cut(s)	840, 1006, 1777, 1785
BbsI	GAAGAC	6 cut(s)	536, 1838, 2184, 2615, 2679, 2685
Bbv12I	GWGCWC	3 cut(s)	840, 1777, 1977
BbvCI	CCTCAGC	2 cut(s)	2202, 2756
BbvI	GCAGC	8 cut(s)	59, 196, 199, 1584, 1712, 2173, 2353, 2496
BccI	CCATC	4 cut(s)	1205, 1349, 2120, 2874
BceAI	ACGGC	2 cut(s)	1094, 1494
BciT130I	CCWGG	9 cut(s)	32, 57, 81, 199, 220, 417, 605, 651, 1311
BclI	TGATCA	1 cut(s)	1864
BcnI	CCSGG	1 cut(s)	3012
BcoDI	GTCTC	6 cut(s)	108, 173, 468, 1111, 2417, 3134
BcuI	ACTAGT	2 cut(s)	1169, 1897
BfaI	CTAG	9 cut(s)	435, 1170, 1274, 1487, 1850, 1898, 2817, 2873, 3110
BfmI	CTRYAG	4 cut(s)	741, 1875, 2317, 2367
BfoI	RGCGCY	2 cut(s)	786, 1204
BfuAI	ACCTGC	1 cut(s)	286
BglII	AGATCT	1 cut(s)	2332
BisI	GCNGC	8 cut(s)	48, 210, 213, 1598, 1701, 2187, 2367, 2485
BlpI	GCTNAGC	2 cut(s)	315, 2986
BlsI	GCNGC	8 cut(s)	49, 211, 214, 1599, 1702, 2188, 2368, 2486
Bme18I	GGWCC	1 cut(s)	1811
BmgBI	CACGTC	1 cut(s)	2511
BmgT120I	GGNCC	3 cut(s)	809, 1811, 2857
BmiI	GGNNCC	3 cut(s)	85, 1202, 1784
BmrI	ACTGGG	2 cut(s)	25, 1038
BmuI	ACTGGG	2 cut(s)	25, 1038
BoxI	GACNNNNGTC	1 cut(s)	1842
BpiI	GAAGAC	6 cut(s)	536, 1838, 2184, 2615, 2679, 2685
BplI	GAGNNNNNCTC	2 cut(s)	1562, 1594
BpmI	CTGGAG	3 cut(s)	53, 283, 1293
Bpu10I	CCTNAGC	3 cut(s)	1656, 2202, 2756
Bpu1102I	GCTNAGC	2 cut(s)	315, 2986
BpuEI	CTTGAG	3 cut(s)	1076, 2623, 3119
BpuMI	CCSGG	1 cut(s)	3012
BsaAI	YACGTR	1 cut(s)	560
BsaBI	GATNNNNATC	2 cut(s)	1368, 1824
BsaHI	GRCGYC	2 cut(s)	1201, 3093
BsaJI	CCNNGG	3 cut(s)	198, 2226, 3069
BsaWI	WCCGGW	1 cut(s)	1222
BsaXI	ACNNNNNCTCC	6 cut(s)	242, 272, 1800, 1830, 2042, 2072
Bsc4I	CCNNNNNNNGG	3 cut(s)	86, 199, 3034
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	5 cut(s)	20, 601, 944, 1033, 2991
Bse21I	CCTNAGG	1 cut(s)	2861
Bse3DI	GCAATG	3 cut(s)	1202, 1656, 2797
Bse8I	GATNNNNATC	2 cut(s)	1368, 1824
BseBI	CCWGG	9 cut(s)	32, 57, 81, 199, 220, 417, 605, 651, 1311
BseDI	CCNNGG	3 cut(s)	198, 2226, 3069
BseGI	GGATG	3 cut(s)	1354, 2020, 3043
BseJI	GATNNNNATC	2 cut(s)	1368, 1824
BseLI	CCNNNNNNNGG	3 cut(s)	86, 199, 3034
BseMI	GCAATG	3 cut(s)	1202, 1656, 2797
BseNI	ACTGG	5 cut(s)	20, 601, 944, 1033, 2991
BseRI	GAGGAG	3 cut(s)	830, 1148, 3122
BseSI	GKGCMC	1 cut(s)	877
BseXI	GCAGC	8 cut(s)	59, 196, 199, 1584, 1712, 2173, 2353, 2496
BseYI	CCCAGC	2 cut(s)	2069, 2586
Bsh1236I	CGCG	3 cut(s)	585, 692, 1429
BshNI	GGYRCC	1 cut(s)	1200
BsiHKAI	GWGCWC	3 cut(s)	840, 1777, 1977
BsiSI	CCGG	3 cut(s)	87, 1223, 3012
BslFI	GGGAC	2 cut(s)	120, 3042
BslI	CCNNNNNNNGG	3 cut(s)	86, 199, 3034
BsmAI	GTCTC	6 cut(s)	108, 173, 468, 1111, 2417, 3134
BsmBI	CGTCTC	2 cut(s)	108, 1111
BsmFI	GGGAC	2 cut(s)	120, 3042
BsmI	GAATGC	3 cut(s)	316, 1033, 1511
Bsp1286I	GDGCHC	6 cut(s)	840, 877, 1006, 1777, 1785, 1977
Bsp1720I	GCTNAGC	2 cut(s)	315, 2986
Bsp68I	TCGCGA	1 cut(s)	585
BspACI	CCGC	7 cut(s)	77, 227, 690, 1427, 2535, 2584, 2730
BspFNI	CGCG	3 cut(s)	585, 692, 1429
BspHI	TCATGA	1 cut(s)	1861
BspLI	GGNNCC	3 cut(s)	85, 1202, 1784
BspMAI	CTGCAG	1 cut(s)	2371
BspMI	ACCTGC	1 cut(s)	286
BspPI	GGATC	7 cut(s)	275, 1214, 1379, 1850, 2611, 2720, 3131
BspT107I	GGYRCC	1 cut(s)	1200
BsrDI	GCAATG	3 cut(s)	1202, 1656, 2797
BsrFI	RCCGGY	1 cut(s)	86
BsrI	ACTGG	5 cut(s)	20, 601, 944, 1033, 2991
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	3 cut(s)	198, 2226, 3069
BssNI	GRCGYC	2 cut(s)	1201, 3093
BssT1I	CCWWGG	1 cut(s)	2226
Bst2UI	CCWGG	9 cut(s)	32, 57, 81, 199, 220, 417, 605, 651, 1311
Bst4CI	ACNGT	9 cut(s)	194, 723, 1640, 1694, 1792, 2318, 2356, 2971, 3056
Bst6I	CTCTTC	4 cut(s)	111, 150, 2368, 2634
BstACI	GRCGYC	2 cut(s)	1201, 3093
BstBAI	YACGTR	1 cut(s)	560
BstC8I	GCNNGC	6 cut(s)	283, 1433, 1527, 1872, 2012, 2948
BstEII	GGTNACC	1 cut(s)	685
BstF5I	GGATG	3 cut(s)	1354, 2020, 3043
BstFNI	CGCG	3 cut(s)	585, 692, 1429
BstH2I	RGCGCY	2 cut(s)	786, 1204
BstHHI	GCGC	7 cut(s)	694, 785, 1203, 1413, 1431, 1888, 2324
BstMAI	GTCTC	6 cut(s)	108, 173, 468, 1111, 2417, 3134
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 118, 844, 2000, 3021
BstNI	CCWGG	9 cut(s)	32, 57, 81, 199, 220, 417, 605, 651, 1311
BstPAI	GACNNNNGTC	1 cut(s)	1842
BstPI	GGTNACC	1 cut(s)	685
BstSFI	CTRYAG	4 cut(s)	741, 1875, 2317, 2367
BstSLI	GKGCMC	1 cut(s)	877
BstUI	CGCG	3 cut(s)	585, 692, 1429
BstV1I	GCAGC	8 cut(s)	59, 196, 199, 1584, 1712, 2173, 2353, 2496
BstV2I	GAAGAC	6 cut(s)	536, 1838, 2184, 2615, 2679, 2685
BstX2I	RGATCY	3 cut(s)	267, 2332, 2725
BstXI	CCANNNNNNTGG	1 cut(s)	1395
BstYI	RGATCY	3 cut(s)	267, 2332, 2725
Bsu36I	CCTNAGG	1 cut(s)	2861
BtgZI	GCGATG	1 cut(s)	2893
BtrI	CACGTC	1 cut(s)	2511
BtsCI	GGATG	3 cut(s)	1354, 2020, 3043
BtsI	GCAGTG	5 cut(s)	984, 1975, 2349, 2435, 2494
BtsIMutI	CAGTG	9 cut(s)	984, 1788, 1975, 2349, 2435, 2494, 2976, 2998, 3047
BtuMI	TCGCGA	1 cut(s)	585
BveI	ACCTGC	1 cut(s)	286
Cac8I	GCNNGC	6 cut(s)	283, 1433, 1527, 1872, 2012, 2948
CaiI	CAGNNNCTG	1 cut(s)	974
CciI	TCATGA	1 cut(s)	1861
CfoI	GCGC	7 cut(s)	694, 785, 1203, 1413, 1431, 1888, 2324
Cfr10I	RCCGGY	1 cut(s)	86
Cfr13I	GGNCC	3 cut(s)	809, 1811, 2857
CseI	GACGC	1 cut(s)	3101
Csp6I	GTAC	5 cut(s)	827, 1013, 1173, 1334, 1627
CviAII	CATG	8 cut(s)	548, 571, 1294, 1340, 1778, 1862, 1965, 2902
CviQI	GTAC	5 cut(s)	827, 1013, 1173, 1334, 1627
DinI	GGCGCC	1 cut(s)	1202
EaeI	YGGCCR	6 cut(s)	124, 601, 941, 1079, 1457, 1967
Eam1104I	CTCTTC	4 cut(s)	111, 150, 2368, 2634
EarI	CTCTTC	4 cut(s)	111, 150, 2368, 2634
Ecl136II	GAGCTC	2 cut(s)	838, 1775
Eco130I	CCWWGG	1 cut(s)	2226
Eco24I	GRGCYC	4 cut(s)	840, 1006, 1777, 1785
Eco47I	GGWCC	1 cut(s)	1811
Eco53kI	GAGCTC	2 cut(s)	838, 1775
Eco57I	CTGAAG	4 cut(s)	402, 414, 1631, 2196
Eco81I	CCTNAGG	1 cut(s)	2861
Eco91I	GGTNACC	1 cut(s)	685
EcoICRI	GAGCTC	2 cut(s)	838, 1775
EcoO109I	RGGNCCY	2 cut(s)	1811, 2857
EcoO65I	GGTNACC	1 cut(s)	685
EcoRI	GAATTC	3 cut(s)	1585, 2579, 2958
EcoRII	CCWGG	9 cut(s)	30, 55, 79, 197, 218, 415, 603, 649, 1309
EcoT14I	CCWWGG	1 cut(s)	2226
EcoT38I	GRGCYC	4 cut(s)	840, 1006, 1777, 1785
EgeI	GGCGCC	1 cut(s)	1202
EheI	GGCGCC	1 cut(s)	1202
ErhI	CCWWGG	1 cut(s)	2226
Esp3I	CGTCTC	2 cut(s)	108, 1111
FaeI	CATG	8 cut(s)	551, 574, 1297, 1343, 1781, 1865, 1968, 2905
FalI	AAGNNNNNCTT	4 cut(s)	1616, 1648, 2934, 2966
FaqI	GGGAC	2 cut(s)	120, 3042
FatI	CATG	8 cut(s)	547, 570, 1293, 1339, 1777, 1861, 1964, 2901
FauI	CCCGC	2 cut(s)	1434, 2737
FbaI	TGATCA	1 cut(s)	1864
FblI	GTMKAC	1 cut(s)	1188
Fnu4HI	GCNGC	8 cut(s)	48, 210, 213, 1598, 1701, 2187, 2367, 2485
FokI	GGATG	3 cut(s)	1361, 2007, 3050
FriOI	GRGCYC	4 cut(s)	840, 1006, 1777, 1785
Fsp4HI	GCNGC	8 cut(s)	48, 210, 213, 1598, 1701, 2187, 2367, 2485
FspBI	CTAG	9 cut(s)	435, 1170, 1274, 1487, 1850, 1898, 2817, 2873, 3110
GlaI	GCGC	7 cut(s)	693, 784, 1202, 1412, 1430, 1887, 2323
GluI	GCNGC	8 cut(s)	48, 210, 213, 1598, 1701, 2187, 2367, 2485
GsaI	CCCAGC	2 cut(s)	2073, 2590
GsuI	CTGGAG	3 cut(s)	53, 283, 1293
HaeII	RGCGCY	2 cut(s)	786, 1204
HapII	CCGG	3 cut(s)	87, 1223, 3012
HgaI	GACGC	1 cut(s)	3101
HhaI	GCGC	7 cut(s)	694, 785, 1203, 1413, 1431, 1888, 2324
Hin1I	GRCGYC	2 cut(s)	1201, 3093
Hin1II	CATG	8 cut(s)	551, 574, 1297, 1343, 1781, 1865, 1968, 2905
Hin6I	GCGC	7 cut(s)	692, 783, 1201, 1411, 1429, 1886, 2322
HinP1I	GCGC	7 cut(s)	692, 783, 1201, 1411, 1429, 1886, 2322
HincII	GTYRAC	1 cut(s)	675
HindII	GTYRAC	1 cut(s)	675
HindIII	AAGCTT	3 cut(s)	521, 1052, 3116
HpaII	CCGG	3 cut(s)	87, 1223, 3012
Hpy166II	GTNNAC	6 cut(s)	675, 929, 1189, 2314, 2498, 2800
Hpy8I	GTNNAC	6 cut(s)	675, 929, 1189, 2314, 2498, 2800
HpyAV	CCTTC	5 cut(s)	296, 389, 397, 2722, 2936
HpyCH4III	ACNGT	9 cut(s)	194, 723, 1640, 1694, 1792, 2318, 2356, 2971, 3056
HpyCH4IV	ACGT	4 cut(s)	559, 2194, 2510, 2785
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 118, 844, 2000, 3021
HpySE526I	ACGT	4 cut(s)	559, 2194, 2510, 2785
Hsp92I	GRCGYC	2 cut(s)	1201, 3093
Hsp92II	CATG	8 cut(s)	551, 574, 1297, 1343, 1781, 1865, 1968, 2905
HspAI	GCGC	7 cut(s)	692, 783, 1201, 1411, 1429, 1886, 2322
KasI	GGCGCC	1 cut(s)	1200
Ksp22I	TGATCA	1 cut(s)	1864
LmnI	GCTCC	9 cut(s)	334, 574, 843, 1231, 1522, 1772, 1788, 1893, 2813
Lsp1109I	GCAGC	8 cut(s)	59, 196, 199, 1584, 1712, 2173, 2353, 2496
MaeI	CTAG	9 cut(s)	435, 1170, 1274, 1487, 1850, 1898, 2817, 2873, 3110
MaeII	ACGT	4 cut(s)	559, 2194, 2510, 2785
MflI	RGATCY	3 cut(s)	267, 2332, 2725
MhlI	GDGCHC	6 cut(s)	840, 877, 1006, 1777, 1785, 1977
MlsI	TGGCCA	4 cut(s)	126, 603, 943, 1969
MluNI	TGGCCA	4 cut(s)	126, 603, 943, 1969
Mly113I	GGCGCC	1 cut(s)	1201
MlyI	GAGTC	8 cut(s)	232, 663, 1750, 2051, 2069, 2419, 2693, 3037
MmeI	TCCRAC	3 cut(s)	228, 1125, 2603
Mox20I	TGGCCA	4 cut(s)	126, 603, 943, 1969
MscI	TGGCCA	4 cut(s)	126, 603, 943, 1969
MseI	TTAA	6 cut(s)	536, 734, 1803, 2823, 2979, 3099
MslI	CAYNNNNRTG	2 cut(s)	2309, 2906
Msp20I	TGGCCA	4 cut(s)	126, 603, 943, 1969
MspA1I	CMGCKG	1 cut(s)	2586
MspI	CCGG	3 cut(s)	87, 1223, 3012
Mva1269I	GAATGC	3 cut(s)	316, 1033, 1511
MvaI	CCWGG	9 cut(s)	32, 57, 81, 199, 220, 417, 605, 651, 1311
MvnI	CGCG	3 cut(s)	585, 692, 1429
MwoI	GCNNNNNNNGC	5 cut(s)	44, 118, 844, 2000, 3021
NarI	GGCGCC	1 cut(s)	1201
NciI	CCSGG	1 cut(s)	3012
NlaIII	CATG	8 cut(s)	551, 574, 1297, 1343, 1781, 1865, 1968, 2905
NlaIV	GGNNCC	3 cut(s)	85, 1202, 1784
NmeAIII	GCCGAG	1 cut(s)	1435
NmuCI	GTSAC	5 cut(s)	685, 2927, 2993, 3040, 3089
NruI	TCGCGA	1 cut(s)	585
PagI	TCATGA	1 cut(s)	1861
PctI	GAATGC	3 cut(s)	316, 1033, 1511
PfoI	TCCNGGA	1 cut(s)	1309
PkrI	GCNGC	8 cut(s)	49, 211, 214, 1599, 1702, 2188, 2368, 2486
PleI	GAGTC	8 cut(s)	231, 662, 1750, 2051, 2069, 2419, 2692, 3037
PluTI	GGCGCC	1 cut(s)	1204
PpsI	GAGTC	8 cut(s)	231, 662, 1750, 2051, 2069, 2419, 2692, 3037
Ppu21I	YACGTR	1 cut(s)	560
PpuMI	RGGWCCY	1 cut(s)	1811
PshAI	GACNNNNGTC	1 cut(s)	1842
PshBI	ATTAAT	1 cut(s)	1803
PsiI	TTATAA	1 cut(s)	1724
Psp124BI	GAGCTC	2 cut(s)	840, 1777
Psp5II	RGGWCCY	1 cut(s)	1811
Psp6I	CCWGG	9 cut(s)	30, 55, 79, 197, 218, 415, 603, 649, 1309
PspEI	GGTNACC	1 cut(s)	685
PspFI	CCCAGC	2 cut(s)	2069, 2586
PspGI	CCWGG	9 cut(s)	30, 55, 79, 197, 218, 415, 603, 649, 1309
PspN4I	GGNNCC	3 cut(s)	85, 1202, 1784
PspPI	GGNCC	3 cut(s)	809, 1811, 2857
PspPPI	RGGWCCY	1 cut(s)	1811
PsrI	GAACNNNNNNTAC	2 cut(s)	2820, 2852
PstI	CTGCAG	1 cut(s)	2371
PstNI	CAGNNNCTG	1 cut(s)	974
PsuI	RGATCY	3 cut(s)	267, 2332, 2725
RruI	TCGCGA	1 cut(s)	585
RsaI	GTAC	5 cut(s)	828, 1014, 1174, 1335, 1628
RsaNI	GTAC	5 cut(s)	827, 1013, 1173, 1334, 1627
RseI	CAYNNNNRTG	2 cut(s)	2309, 2906
SacI	GAGCTC	2 cut(s)	840, 1777
SaqAI	TTAA	6 cut(s)	536, 734, 1803, 2823, 2979, 3099
SatI	GCNGC	8 cut(s)	48, 210, 213, 1598, 1701, 2187, 2367, 2485
Sau96I	GGNCC	3 cut(s)	809, 1811, 2857
SchI	GAGTC	8 cut(s)	232, 663, 1750, 2051, 2069, 2419, 2693, 3037
SduI	GDGCHC	6 cut(s)	840, 877, 1006, 1777, 1785, 1977
SfcI	CTRYAG	4 cut(s)	741, 1875, 2317, 2367
SfoI	GGCGCC	1 cut(s)	1202
SinI	GGWCC	1 cut(s)	1811
SmiMI	CAYNNNNRTG	2 cut(s)	2309, 2906
SmlI	CTYRAG	3 cut(s)	1055, 2602, 3134
SmoI	CTYRAG	3 cut(s)	1055, 2602, 3134
SpeI	ACTAGT	2 cut(s)	1169, 1897
SsiI	CCGC	7 cut(s)	77, 227, 690, 1427, 2535, 2584, 2730
SspDI	GGCGCC	1 cut(s)	1200
SspMI	CTAG	9 cut(s)	435, 1170, 1274, 1487, 1850, 1898, 2817, 2873, 3110
SstI	GAGCTC	2 cut(s)	840, 1777
StyI	CCWWGG	1 cut(s)	2226
TaaI	ACNGT	9 cut(s)	194, 723, 1640, 1694, 1792, 2318, 2356, 2971, 3056
TaiI	ACGT	4 cut(s)	562, 2197, 2513, 2788
TaqI	TCGA	6 cut(s)	1555, 1740, 1764, 1818, 2553, 2897
TatI	WGTACW	1 cut(s)	1172
Tru1I	TTAA	6 cut(s)	536, 734, 1803, 2823, 2979, 3099
Tru9I	TTAA	6 cut(s)	536, 734, 1803, 2823, 2979, 3099
TscAI	CASTG	9 cut(s)	991, 1795, 1982, 2349, 2442, 2494, 2976, 2998, 3054
TseFI	GTSAC	5 cut(s)	685, 2927, 2993, 3040, 3089
TseI	GCWGC	8 cut(s)	47, 209, 212, 1597, 1700, 2186, 2366, 2484
Tsp45I	GTSAC	5 cut(s)	685, 2927, 2993, 3040, 3089
TspDTI	ATGAA	8 cut(s)	536, 1268, 1313, 1380, 1726, 1953, 2383, 2762
TspGWI	ACGGA	5 cut(s)	785, 1135, 2302, 2609, 2948
TspRI	CASTG	9 cut(s)	991, 1795, 1982, 2349, 2442, 2494, 2976, 2998, 3054
VpaK11BI	GGWCC	1 cut(s)	1811
VspI	ATTAAT	1 cut(s)	1803
XapI	RAATTY	9 cut(s)	253, 274, 860, 1319, 1585, 1686, 2255, 2579, 2958
XbaI	TCTAGA	1 cut(s)	3109
XmiI	GTMKAC	1 cut(s)	1188
XspI	CTAG	9 cut(s)	435, 1170, 1274, 1487, 1850, 1898, 2817, 2873, 3110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.