transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11260 |
| fragaria_vesca | FvH4_2g29440 |
| malus_domestica | MD08G1147100.v1.1 |
| prunus_persica | Prupe.1G478400_v2.0.a1 |
| pyrus_communis | pycom08g12390 pycom15g11080 |
| rosa_chinensis | RchiOBHm_Chr6g0298231 |
| rosa_laevigata | RLG00000011523 |
| rosa_multiflora | Rmu_sc0017507.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00169840 |
| rosa_rugosa | Rorug06G0279600 Rorug06G0279600 Rorug06G0279700 |
| rosa_samantha | Rh6BG398400 Rh6CG404300 |
| rosa_wichuraiana | Rw6G034050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 202 |
| AciI | CCGC | 3 cut(s) | 202, 254, 271 |
| AclWI | GGATC | 1 cut(s) | 190 |
| AcuI | CTGAAG | 3 cut(s) | 296, 395, 464 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 137 |
| AgeI | ACCGGT | 1 cut(s) | 191 |
| AgsI | TTSAA | 2 cut(s) | 104, 392 |
| AluBI | AGCT | 6 cut(s) | 21, 29, 36, 69, 149, 305 |
| AluI | AGCT | 6 cut(s) | 21, 29, 36, 69, 149, 305 |
| AlwI | GGATC | 1 cut(s) | 190 |
| ApeKI | GCWGC | 2 cut(s) | 29, 51 |
| AsiGI | ACCGGT | 1 cut(s) | 191 |
| BbvI | GCAGC | 2 cut(s) | 16, 63 |
| BccI | CCATC | 1 cut(s) | 52 |
| BceAI | ACGGC | 1 cut(s) | 137 |
| BfaI | CTAG | 1 cut(s) | 18 |
| BisI | GCNGC | 3 cut(s) | 30, 52, 272 |
| BlpI | GCTNAGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 3 cut(s) | 31, 53, 273 |
| BmsI | GCATC | 2 cut(s) | 417, 484 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 386, 418 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 306 |
| BpuEI | CTTGAG | 1 cut(s) | 358 |
| BsaWI | WCCGGW | 2 cut(s) | 167, 191 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 135, 165 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 137 |
| Bse118I | RCCGGY | 2 cut(s) | 191, 250 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 137 |
| BseMII | CTCAG | 1 cut(s) | 320 |
| BseRI | GAGGAG | 3 cut(s) | 128, 156, 483 |
| BseXI | GCAGC | 2 cut(s) | 16, 63 |
| Bsh1285I | CGRYCG | 1 cut(s) | 192 |
| BshTI | ACCGGT | 1 cut(s) | 191 |
| BsiEI | CGRYCG | 1 cut(s) | 192 |
| BsiSI | CCGG | 4 cut(s) | 131, 168, 192, 251 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 137 |
| Bsp143I | GATC | 2 cut(s) | 87, 182 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 306 |
| BspACI | CCGC | 3 cut(s) | 202, 254, 271 |
| BspCNI | CTCAG | 1 cut(s) | 319 |
| BspPI | GGATC | 1 cut(s) | 190 |
| BspQI | GCTCTTC | 1 cut(s) | 387 |
| BsrBI | CCGCTC | 1 cut(s) | 202 |
| BsrFI | RCCGGY | 2 cut(s) | 191, 250 |
| BssAI | RCCGGY | 2 cut(s) | 191, 250 |
| BssMI | GATC | 2 cut(s) | 87, 182 |
| Bst4CI | ACNGT | 1 cut(s) | 217 |
| Bst6I | CTCTTC | 3 cut(s) | 272, 387, 414 |
| BstC8I | GCNNGC | 3 cut(s) | 34, 312, 499 |
| BstDEI | CTNAG | 2 cut(s) | 306, 431 |
| BstKTI | GATC | 2 cut(s) | 90, 185 |
| BstMBI | GATC | 2 cut(s) | 87, 182 |
| BstMCI | CGRYCG | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 311 |
| BstV1I | GCAGC | 2 cut(s) | 16, 63 |
| BtgZI | GCGATG | 1 cut(s) | 123 |
| Cac8I | GCNNGC | 3 cut(s) | 34, 312, 499 |
| Cfr10I | RCCGGY | 2 cut(s) | 191, 250 |
| CspAI | ACCGGT | 1 cut(s) | 191 |
| CviJI | RGCY | 9 cut(s) | 21, 29, 36, 69, 149, 274, 305, 332, 501 |
| CviKI_1 | RGCY | 9 cut(s) | 21, 29, 36, 69, 149, 274, 305, 332, 501 |
| DdeI | CTNAG | 2 cut(s) | 306, 431 |
| DpnI | GATC | 2 cut(s) | 89, 184 |
| DpnII | GATC | 2 cut(s) | 87, 182 |
| Eam1104I | CTCTTC | 3 cut(s) | 272, 387, 414 |
| EarI | CTCTTC | 3 cut(s) | 272, 387, 414 |
| EciI | GGCGGA | 1 cut(s) | 269 |
| Eco57I | CTGAAG | 3 cut(s) | 296, 395, 464 |
| FaiI | YATR | 1 cut(s) | 438 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 320, 352 |
| Fnu4HI | GCNGC | 3 cut(s) | 30, 52, 272 |
| Fsp4HI | GCNGC | 3 cut(s) | 30, 52, 272 |
| FspBI | CTAG | 1 cut(s) | 18 |
| GluI | GCNGC | 3 cut(s) | 30, 52, 272 |
| HapII | CCGG | 4 cut(s) | 131, 168, 192, 251 |
| HinfI | GANTC | 2 cut(s) | 176, 399 |
| HpaII | CCGG | 4 cut(s) | 131, 168, 192, 251 |
| Hpy188I | TCNGA | 5 cut(s) | 155, 221, 385, 414, 444 |
| Hpy188III | TCNNGA | 2 cut(s) | 180, 197 |
| HpyAV | CCTTC | 1 cut(s) | 89 |
| HpyCH4III | ACNGT | 1 cut(s) | 217 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 32, 497 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 311 |
| HpyF3I | CTNAG | 2 cut(s) | 306, 431 |
| Kzo9I | GATC | 2 cut(s) | 87, 182 |
| LguI | GCTCTTC | 1 cut(s) | 387 |
| LmnI | GCTCC | 2 cut(s) | 79, 199 |
| LpnPI | CCDG | 9 cut(s) | 144, 165, 181, 182, 194, 205, 264, 437, 441 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 63 |
| LweI | GCATC | 2 cut(s) | 417, 484 |
| MaeI | CTAG | 1 cut(s) | 18 |
| MalI | GATC | 2 cut(s) | 89, 184 |
| MbiI | CCGCTC | 1 cut(s) | 202 |
| MboI | GATC | 2 cut(s) | 87, 182 |
| MboII | GAAGA | 4 cut(s) | 289, 401, 404, 457 |
| MluCI | AATT | 1 cut(s) | 99 |
| MlyI | GAGTC | 1 cut(s) | 393 |
| MmeI | TCCRAC | 3 cut(s) | 133, 199, 327 |
| MspI | CCGG | 4 cut(s) | 131, 168, 192, 251 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 311 |
| NdeII | GATC | 2 cut(s) | 87, 182 |
| PciSI | GCTCTTC | 1 cut(s) | 387 |
| PfeI | GAWTC | 1 cut(s) | 176 |
| PinAI | ACCGGT | 1 cut(s) | 191 |
| PkrI | GCNGC | 3 cut(s) | 31, 53, 273 |
| PleI | GAGTC | 1 cut(s) | 393 |
| PpsI | GAGTC | 1 cut(s) | 393 |
| SapI | GCTCTTC | 1 cut(s) | 387 |
| SatI | GCNGC | 3 cut(s) | 30, 52, 272 |
| Sau3AI | GATC | 2 cut(s) | 87, 182 |
| SchI | GAGTC | 1 cut(s) | 393 |
| SetI | ASST | 9 cut(s) | 23, 31, 38, 62, 71, 151, 284, 307, 475 |
| SfaNI | GCATC | 2 cut(s) | 417, 484 |
| SgrAI | CRCCGGYG | 1 cut(s) | 250 |
| SmlI | CTYRAG | 1 cut(s) | 337 |
| SmoI | CTYRAG | 1 cut(s) | 337 |
| Sse9I | AATT | 1 cut(s) | 99 |
| SsiI | CCGC | 3 cut(s) | 202, 254, 271 |
| SspMI | CTAG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 217 |
| TasI | AATT | 1 cut(s) | 99 |
| TauI | GCSGC | 1 cut(s) | 274 |
| TfiI | GAWTC | 1 cut(s) | 176 |
| TseI | GCWGC | 2 cut(s) | 29, 51 |
| XspI | CTAG | 1 cut(s) | 18 |