Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011332

Physical Location & Seq

Genomic Coordinates Forward (+)

4222512 .. 4224982

Gene Structure 2471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G13230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGATCGTGTTCATGAGAATAATTCATGTTGCGCAGACTCGCAGATTGATGATCCGATGCAATCGCATTCGACAATGTGGGTTTTCTGTGAAAACTGCGGCATTGGATTTAGAATCGTCGGATTCGATAATCCCAGGCTTAGACTCTCATGCTTACGGTGCAATGCTCCGTCGCTGCATTCAGAAGAACGACCCAATTTCAGCAAAGGCTATTCATTGCGACATCTTGAAGAAAGGAAGCTGCTTAGACCTTTTCGCCACAAACATTCTACTCAACGCTTATGTGAAAGCTGGCTTTGACAAAGATGCGTTAAACCTGTTCGACGAAATGCCTGAGAGAAATAATGTCTCTTTTGTTACTCTTGCGCAAGGGTATGCGTGTCAAGATCCCATTGGTTTGTATTCCAGGTTGCATCGAGAGGGTCATGAGCTTAATCCACACGTCTTCACTTCTTTCTTGAAGTTGTTTGTTAGTTTGGACAAAGCTGAGATTTGTCCATGGTTGCATTCTCCTATCGTTAAGCTCGGTTATGATTCTAATGCTTTTGTTGGAGCTGCGCTTATTAATGCTTACTCTGTCTGTGGTTCTGTTGATAGTGCAAGAACTGTTTTTGAAGGGATTTTGTGCAAAGACATTGTTGTTTGGGCAGGAATTGTATCTTGCTATGTAGAAAATGGATATTTCGAGGATTCTCTTAAGCTGCTATCTTGTATGAGGATGGCTGGTTTCATGCCCAACAACTACACCTTTGACACGGCGCTTAAGGCTAGTATTGGGCTAGGCGCATTTGATTTCGCGAAAGGTGTTCATGGCCAAATCTTAAAAACATGTTATGTGTTGGATCCTCGTGTGGGTGTTGGTTTGCTTCAGTTGTATACACAACTCGGAGACATGTCTGATGCTTTCAAAGTGTTTAATGAGATGCCAAAGAATGATGTGGTACCTTGGAGTTTTATGATTGCTCGTTTTTGTCAAAACGGTTTCTGCAACGAGGCGGTTGATCTTTTTATTCGAATGAGGGAAGCTTTTGTTGTCCCTAACGAGTTTACTTTAAGCAGTATTTTGAATGGCTGTGCCATCGGAAAGTGTTCTGGCTTAGGTGAGCAACTCCATGGTCTTGTAGTCAAAGTTGGCTTTGATTTGGATATCTATGTCTCAAATGCTCTTATTGATGTATATGCCAAATGTGAGAAAATGGATACCGCTGTGAAGTTATTTGCTGAGTTATCAAGTAAAAATGAGGTAAGCTGGAACACAGTCATTGTCGGGTATGAGAATCTAGGCGAAGGAGGAAAAGCGTTCAGCATGTTTCGTGAAGCGCTCAGAAATCAGGTGTCGGTAACTGAAGTAACTTTCTCAAGTGCTCTTGGAGCTTGTGCTTCATTGGCGAGCATGGACCTCGGTGTCCAAGTTCATGGACTGGCGATAAAAACCAATAATGCCAAAAAAGTTGCAGTGAGTAACTCATTGATAGATATGTATGCAAAATGTGGTGATATCAAATTCGCACAATCGGTGTTCAACGAGATGGAAACGATAGATGTCGCTTCATGGAATGCGTTGATCTCAGGCTATTCCACACATGGACTGGGTAGACAGGCATTGAGAATCCTCGACATTATGAAGGATAGAGATTGCAAGCCAAATGGTTTAACATTTCTTGGTGTTCTTTCTGGATGCAGCAATGCAGGATTAATAGATCAAGGTCAAGAATGTTTTGAATCAATGATTCGTGATCATGGTATTGAACCATGTTTGGAACATTATACGTGTATGGTCAGGCTTTTGGGAAGATCAGGGCAGCTTGACAAAGCAATGAAGCTGATTGAAGGGATTCCATATGAGCCTAGCGTTATGATCTGGAGGGCAATGCTTAGTGCCTCTATGAATCAGAACAATGAAGAGTTTGCAAGGAGATCGGCAGAGGAAATACTAAAGATCAATCCAAAGGACGAGGCGACATATGTTCTGGTATCAAACATGTACGCAGGTGCAAAACAATGGGCAAACGTAGCTTCCATTAGGAAAAGCATGAAGGAAATGGGTGTCAAGAAGGAACCTGGTTTAAGTTGGATAGAACATCAAGGTGATGTGCATTACTTCAGTGTGGGGTTATCAGATCATCCGGATATGAAGCTCATAAATGGAATGTTGGAATGGCTTAACATGAAAGCAACTCGAGCTGGTTACGTTCCTGATCGGAATGCGGTCCTGCTCGATATGGATGATGAAGAAAAGGATAAGAGATTGTGGGTTCATAGCGAGAGGTTGGCTTTGGCGTATGGGCTTGTTCGAATGCCATCATCAAGAAATCGCATACTGATCATGAAGAATCTACGGATATGTTCAGATTGCCACAGTGCTATGAAAGTGATTTCAAGTATCGTACAGCGAGATCTGGTTATAAGAGATATGAACCGGTTCCATCATTTTCATGCAGGAGTCTGCTCTTGCGGCGACCACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

822

Amino Acids

91.44

Weight (kDa)

6.63

Isoelectric Point (pI)

31.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	312 - 359	4.7e-08	PPR repeat family
PPR_2	PF13041	413 - 460	2.6e-07	PPR repeat family
PPR_2	PF13041	514 - 562	9.1e-11	PPR repeat family
E_motif	PF20431	632 - 693	3.6e-19	E motif
DYW_deaminase	PF14432	729 - 822	7.6e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13230
fragaria_vesca	FvH4_4g22970 FvH4_4g22970
malus_domestica	MD13G1127800.v1.1
prunus_persica	Prupe.1G218200_v2.0.a1
pyrus_communis	pycom13g11070 pycom16g10860 pycom16g10870
rosa_chinensis	RchiOBHm_Chr4g0429241
rosa_laevigata	RLG00000007086
rosa_multiflora	Rmu_sc0000054.1_g000027
rosa_roxburghii	Rroxscaffold_5G00370870
rosa_rugosa	Rorug04G0234000 Rorug04G0234100 Rorug04G0234200 Rorug04G0234300 Rorug04G0234400
rosa_samantha	Rh4AG290100 Rh4BG295800
rosa_wichuraiana	Rw4G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2405
AarI	CACCTGC	1 cut(s)	1979
AasI	GACNNNNNNGTC	1 cut(s)	1403
Acc16I	TGCGCA	2 cut(s)	33, 366
Acc36I	ACCTGC	1 cut(s)	1979
Acc65I	GGTACC	1 cut(s)	940
AccB1I	GGYRCC	1 cut(s)	940
AccI	GTMKAC	2 cut(s)	875, 1594
AccII	CGCG	1 cut(s)	797
AccIII	TCCGGA	1 cut(s)	2125
AciI	CCGC	5 cut(s)	98, 995, 1203, 2207, 2454
AclWI	GGATC	4 cut(s)	46, 380, 836, 849
AcoI	YGGCCR	1 cut(s)	811
AcsI	RAATTY	1 cut(s)	1502
AcuI	CTGAAG	3 cut(s)	851, 1365, 2086
AfaI	GTAC	3 cut(s)	942, 1985, 2388
AfeI	AGCGCT	1 cut(s)	1320
AfiI	CCNNNNNNNGG	1 cut(s)	851
AflII	CTTAAG	2 cut(s)	695, 761
AflIII	ACRYGT	5 cut(s)	439, 827, 891, 1769, 1980
AgeI	ACCGGT	1 cut(s)	2418
AjiI	CACGTC	1 cut(s)	442
AjnI	CCWGG	3 cut(s)	133, 404, 2059
Alw21I	GWGCWC	1 cut(s)	1366
Alw26I	GTCTC	3 cut(s)	352, 882, 1159
AlwI	GGATC	4 cut(s)	46, 380, 836, 849
Ama87I	CYCGRG	1 cut(s)	2178
Aor13HI	TCCGGA	1 cut(s)	2125
Aor51HI	AGCGCT	1 cut(s)	1320
AoxI	GGCC	1 cut(s)	811
ApeKI	GCWGC	6 cut(s)	174, 240, 554, 700, 1680, 1801
ApoI	RAATTY	1 cut(s)	1502
AseI	ATTAAT	2 cut(s)	564, 1694
AsiGI	ACCGGT	1 cut(s)	2418
Asp700I	GAANNNNTTC	3 cut(s)	1087, 1833, 2420
Asp718I	GGTACC	1 cut(s)	940
AspLEI	GCGC	6 cut(s)	34, 367, 559, 760, 785, 1321
AspS9I	GGNCC	2 cut(s)	1396, 2209
AsuHPI	GGTGA	3 cut(s)	1112, 1505, 2099
AsuII	TTCGAA	2 cut(s)	1012, 2293
AvaI	CYCGRG	1 cut(s)	2178
AvaII	GGWCC	2 cut(s)	1396, 2209
BaeI	ACNNNNGTAYC	2 cut(s)	1191, 1224
BalI	TGGCCA	1 cut(s)	813
BamHI	GGATCC	1 cut(s)	841
BanI	GGYRCC	1 cut(s)	940
BauI	CACGAG	1 cut(s)	846
BbsI	GAAGAC	1 cut(s)	436
Bbv12I	GWGCWC	1 cut(s)	1366
BbvI	GCAGC	6 cut(s)	161, 227, 541, 687, 1692, 1813
BccI	CCATC	5 cut(s)	712, 1085, 1522, 2308, 2433
BceAI	ACGGC	1 cut(s)	771
BcgI	CGANNNNNNTGC	4 cut(s)	1381, 1415, 1899, 1933
BciT130I	CCWGG	3 cut(s)	135, 406, 2061
BciVI	GTATCC	1 cut(s)	1192
BclI	TGATCA	2 cut(s)	1735, 2322
BcoDI	GTCTC	3 cut(s)	352, 882, 1159
BfaI	CTAG	4 cut(s)	768, 779, 1280, 1848
BfoI	RGCGCY	2 cut(s)	761, 1322
BfrI	CTTAAG	2 cut(s)	695, 761
BfuAI	ACCTGC	1 cut(s)	1979
BfuI	GTATCC	1 cut(s)	1192
BglII	AGATCT	1 cut(s)	2395
BisI	GCNGC	8 cut(s)	99, 175, 241, 555, 701, 1681, 1802, 2455
BlsI	GCNGC	8 cut(s)	100, 176, 242, 556, 702, 1682, 1803, 2456
Bme1390I	CCNGG	3 cut(s)	135, 406, 2061
Bme18I	GGWCC	2 cut(s)	1396, 2209
BmeT110I	CYCGRG	1 cut(s)	2178
BmgBI	CACGTC	1 cut(s)	442
BmgT120I	GGNCC	2 cut(s)	1396, 2209
BmiI	GGNNCC	4 cut(s)	843, 942, 2058, 2423
BmrFI	CCNGG	3 cut(s)	135, 406, 2061
BmrI	ACTGGG	1 cut(s)	1598
BmsI	GCATC	6 cut(s)	47, 295, 421, 889, 912, 1667
BmuI	ACTGGG	1 cut(s)	1598
BpiI	GAAGAC	1 cut(s)	436
BpmI	CTGGAG	1 cut(s)	1882
Bpu10I	CCTNAGC	1 cut(s)	1096
Bpu14I	TTCGAA	2 cut(s)	1012, 2293
BpuEI	CTTGAG	1 cut(s)	1342
BsaAI	YACGTR	1 cut(s)	1770
BsaJI	CCNNGG	5 cut(s)	133, 497, 944, 1111, 1399
BsaWI	WCCGGW	2 cut(s)	2125, 2418
Bsc4I	CCNNNNNNNGG	1 cut(s)	851
Bse118I	RCCGGY	1 cut(s)	2418
Bse1I	ACTGG	3 cut(s)	1425, 1593, 2468
Bse3DI	GCAATG	5 cut(s)	168, 214, 1690, 1821, 1875
BseAI	TCCGGA	1 cut(s)	2125
BseBI	CCWGG	3 cut(s)	135, 406, 2061
BseDI	CCNNGG	5 cut(s)	133, 497, 944, 1111, 1399
BseGI	GGATG	4 cut(s)	723, 1682, 2122, 2230
BseLI	CCNNNNNNNGG	1 cut(s)	851
BseMI	GCAATG	5 cut(s)	168, 214, 1690, 1821, 1875
BseMII	CTCAG	5 cut(s)	324, 477, 1212, 1336, 1581
BseNI	ACTGG	3 cut(s)	1425, 1593, 2468
BseXI	GCAGC	6 cut(s)	161, 227, 541, 687, 1692, 1813
Bsh1236I	CGCG	1 cut(s)	797
BshFI	GGCC	1 cut(s)	813
BshNI	GGYRCC	1 cut(s)	940
BshTI	ACCGGT	1 cut(s)	2418
BsiHKAI	GWGCWC	1 cut(s)	1366
BsiHKCI	CYCGRG	1 cut(s)	2178
BsiSI	CCGG	2 cut(s)	2126, 2419
BslFI	GGGAC	1 cut(s)	1019
BslI	CCNNNNNNNGG	1 cut(s)	851
BsmAI	GTCTC	3 cut(s)	352, 882, 1159
BsmFI	GGGAC	1 cut(s)	1019
BsmI	GAATGC	6 cut(s)	66, 177, 505, 1561, 2209, 2301
BsnI	GGCC	1 cut(s)	813
BsoBI	CYCGRG	1 cut(s)	2178
Bsp119I	TTCGAA	2 cut(s)	1012, 2293
Bsp1286I	GDGCHC	1 cut(s)	1366
Bsp13I	TCCGGA	1 cut(s)	2125
Bsp19I	CCATGG	2 cut(s)	497, 1111
Bsp68I	TCGCGA	1 cut(s)	797
BspACI	CCGC	5 cut(s)	98, 995, 1203, 2207, 2454
BspANI	GGCC	1 cut(s)	813
BspCNI	CTCAG	5 cut(s)	325, 478, 1213, 1335, 1580
BspEI	TCCGGA	1 cut(s)	2125
BspFNI	CGCG	1 cut(s)	797
BspHI	TCATGA	3 cut(s)	12, 424, 2325
BspLI	GGNNCC	4 cut(s)	843, 942, 2058, 2423
BspMI	ACCTGC	1 cut(s)	1979
BspPI	GGATC	4 cut(s)	46, 380, 836, 849
BspT104I	TTCGAA	2 cut(s)	1012, 2293
BspT107I	GGYRCC	1 cut(s)	940
BspTI	CTTAAG	2 cut(s)	695, 761
BsrDI	GCAATG	5 cut(s)	168, 214, 1690, 1821, 1875
BsrFI	RCCGGY	1 cut(s)	2418
BsrI	ACTGG	3 cut(s)	1425, 1593, 2468
BssAI	RCCGGY	1 cut(s)	2418
BssECI	CCNNGG	5 cut(s)	133, 497, 944, 1111, 1399
BssNAI	GTATAC	1 cut(s)	876
BssSI	CACGAG	1 cut(s)	846
BssT1I	CCWWGG	3 cut(s)	497, 944, 1111
Bst1107I	GTATAC	1 cut(s)	876
Bst2BI	CACGAG	1 cut(s)	846
Bst2UI	CCWGG	3 cut(s)	135, 406, 2061
Bst4CI	ACNGT	5 cut(s)	158, 607, 980, 1258, 2360
Bst6I	CTCTTC	1 cut(s)	1896
BstAFI	CTTAAG	2 cut(s)	695, 761
BstBAI	YACGTR	1 cut(s)	1770
BstBI	TTCGAA	2 cut(s)	1012, 2293
BstC8I	GCNNGC	3 cut(s)	292, 1390, 1640
BstDEI	CTNAG	9 cut(s)	139, 244, 333, 486, 1096, 1221, 1322, 1567, 1874
BstDSI	CCRYGG	2 cut(s)	497, 1111
BstF5I	GGATG	4 cut(s)	723, 1682, 2122, 2230
BstFNI	CGCG	1 cut(s)	797
BstH2I	RGCGCY	2 cut(s)	761, 1322
BstHHI	GCGC	6 cut(s)	34, 367, 559, 760, 785, 1321
BstMAI	GTCTC	3 cut(s)	352, 882, 1159
BstMWI	GCNNNNNNNGC	7 cut(s)	158, 764, 1370, 1385, 2012, 2180, 2454
BstNI	CCWGG	3 cut(s)	135, 406, 2061
BstNSI	RCATGY	4 cut(s)	831, 895, 1309, 1984
BstSCI	CCNGG	3 cut(s)	133, 404, 2059
BstUI	CGCG	1 cut(s)	797
BstV1I	GCAGC	6 cut(s)	161, 227, 541, 687, 1692, 1813
BstV2I	GAAGAC	1 cut(s)	436
BstX2I	RGATCY	3 cut(s)	385, 841, 2395
BstXI	CCANNNNNNTGG	1 cut(s)	1415
BstYI	RGATCY	3 cut(s)	385, 841, 2395
BstZ17I	GTATAC	1 cut(s)	876
BsuI	GTATCC	1 cut(s)	1192
BsuRI	GGCC	1 cut(s)	813
BtgI	CCRYGG	2 cut(s)	497, 1111
BtrI	CACGTC	1 cut(s)	442
BtsCI	GGATG	4 cut(s)	723, 1682, 2122, 2230
BtsI	GCAGTG	1 cut(s)	1461
BtsIMutI	CAGTG	4 cut(s)	1461, 2110, 2365, 2461
BtuMI	TCGCGA	1 cut(s)	797
BveI	ACCTGC	1 cut(s)	1979
Cac8I	GCNNGC	3 cut(s)	292, 1390, 1640
CciI	TCATGA	3 cut(s)	12, 424, 2325
CfoI	GCGC	6 cut(s)	34, 367, 559, 760, 785, 1321
Cfr10I	RCCGGY	1 cut(s)	2418
Cfr13I	GGNCC	2 cut(s)	1396, 2209
CsiI	ACCWGGT	1 cut(s)	2059
Csp6I	GTAC	3 cut(s)	941, 1984, 2387
CspAI	ACCGGT	1 cut(s)	2418
CviQI	GTAC	3 cut(s)	941, 1984, 2387
DdeI	CTNAG	9 cut(s)	139, 244, 333, 486, 1096, 1221, 1322, 1567, 1874
DrdI	GACNNNNNNGTC	1 cut(s)	1403
DseDI	GACNNNNNNGTC	1 cut(s)	1403
EaeI	YGGCCR	1 cut(s)	811
Eam1104I	CTCTTC	1 cut(s)	1896
EarI	CTCTTC	1 cut(s)	1896
Eco130I	CCWWGG	3 cut(s)	497, 944, 1111
Eco32I	GATATC	2 cut(s)	1147, 1498
Eco47I	GGWCC	2 cut(s)	1396, 2209
Eco47III	AGCGCT	1 cut(s)	1320
Eco57I	CTGAAG	3 cut(s)	851, 1365, 2086
Eco88I	CYCGRG	1 cut(s)	2178
EcoRII	CCWGG	3 cut(s)	133, 404, 2059
EcoRV	GATATC	2 cut(s)	1147, 1498
EcoT14I	CCWWGG	3 cut(s)	497, 944, 1111
ErhI	CCWWGG	3 cut(s)	497, 944, 1111
FaqI	GGGAC	1 cut(s)	1019
FauNDI	CATATG	2 cut(s)	1840, 1963
FbaI	TGATCA	2 cut(s)	1735, 2322
FblI	GTMKAC	2 cut(s)	875, 1594
Fnu4HI	GCNGC	8 cut(s)	99, 175, 241, 555, 701, 1681, 1802, 2455
FokI	GGATG	4 cut(s)	730, 1689, 2109, 2237
Fsp4HI	GCNGC	8 cut(s)	99, 175, 241, 555, 701, 1681, 1802, 2455
FspBI	CTAG	4 cut(s)	768, 779, 1280, 1848
FspI	TGCGCA	2 cut(s)	33, 366
GlaI	GCGC	6 cut(s)	33, 366, 558, 759, 784, 1320
GluI	GCNGC	8 cut(s)	99, 175, 241, 555, 701, 1681, 1802, 2455
GsuI	CTGGAG	1 cut(s)	1882
HaeII	RGCGCY	2 cut(s)	761, 1322
HaeIII	GGCC	1 cut(s)	813
HapII	CCGG	2 cut(s)	2126, 2419
HhaI	GCGC	6 cut(s)	34, 367, 559, 760, 785, 1321
Hin6I	GCGC	6 cut(s)	32, 365, 557, 758, 783, 1319
HinP1I	GCGC	6 cut(s)	32, 365, 557, 758, 783, 1319
HindIII	AAGCTT	1 cut(s)	1023
HpaII	CCGG	2 cut(s)	2126, 2419
HphI	GGTGA	3 cut(s)	1112, 1505, 2099
Hpy166II	GTNNAC	3 cut(s)	876, 1047, 1595
Hpy8I	GTNNAC	3 cut(s)	876, 1047, 1595
Hpy99I	CGWCG	3 cut(s)	121, 174, 326
HpyAV	CCTTC	6 cut(s)	608, 1280, 1618, 1823, 2029, 2047
HpyCH4III	ACNGT	5 cut(s)	158, 607, 980, 1258, 2360
HpyCH4IV	ACGT	4 cut(s)	441, 1769, 2010, 2190
HpyF10VI	GCNNNNNNNGC	7 cut(s)	158, 764, 1370, 1385, 2012, 2180, 2454
HpyF3I	CTNAG	9 cut(s)	139, 244, 333, 486, 1096, 1221, 1322, 1567, 1874
HpySE526I	ACGT	4 cut(s)	441, 1769, 2010, 2190
HspAI	GCGC	6 cut(s)	32, 365, 557, 758, 783, 1319
Kpn2I	TCCGGA	1 cut(s)	2125
KpnI	GGTACC	1 cut(s)	944
Ksp22I	TGATCA	2 cut(s)	1735, 2322
LmnI	GCTCC	3 cut(s)	171, 551, 1370
Lsp1109I	GCAGC	6 cut(s)	161, 227, 541, 687, 1692, 1813
LweI	GCATC	6 cut(s)	47, 295, 421, 889, 912, 1667
MabI	ACCWGGT	1 cut(s)	2059
MaeI	CTAG	4 cut(s)	768, 779, 1280, 1848
MaeII	ACGT	4 cut(s)	441, 1769, 2010, 2190
MaeIII	GTNAC	5 cut(s)	355, 1339, 1348, 1460, 2186
MboII	GAAGA	7 cut(s)	196, 241, 436, 1803, 1913, 2243, 2341
MflI	RGATCY	3 cut(s)	385, 841, 2395
MhlI	GDGCHC	1 cut(s)	1366
MlsI	TGGCCA	1 cut(s)	813
MluCI	AATT	4 cut(s)	21, 195, 651, 1502
MluNI	TGGCCA	1 cut(s)	813
MlyI	GAGTC	3 cut(s)	31, 137, 2451
MmeI	TCCRAC	5 cut(s)	99, 529, 819, 2051, 2133
Mox20I	TGGCCA	1 cut(s)	813
MroI	TCCGGA	1 cut(s)	2125
MroXI	GAANNNNTTC	3 cut(s)	1087, 1833, 2420
MscI	TGGCCA	1 cut(s)	813
MslI	CAYNNNNRTG	2 cut(s)	2085, 2433
Msp20I	TGGCCA	1 cut(s)	813
MspA1I	CMGCKG	1 cut(s)	1205
MspCI	CTTAAG	2 cut(s)	695, 761
MspI	CCGG	2 cut(s)	2126, 2419
MspR9I	CCNGG	3 cut(s)	135, 406, 2061
Mva1269I	GAATGC	6 cut(s)	66, 177, 505, 1561, 2209, 2301
MvaI	CCWGG	3 cut(s)	135, 406, 2061
MvnI	CGCG	1 cut(s)	797
MwoI	GCNNNNNNNGC	7 cut(s)	158, 764, 1370, 1385, 2012, 2180, 2454
NcoI	CCATGG	2 cut(s)	497, 1111
NdeI	CATATG	2 cut(s)	1840, 1963
NlaIV	GGNNCC	4 cut(s)	843, 942, 2058, 2423
NruI	TCGCGA	1 cut(s)	797
NsbI	TGCGCA	2 cut(s)	33, 366
NspI	RCATGY	4 cut(s)	831, 895, 1309, 1984
NspV	TTCGAA	2 cut(s)	1012, 2293
PaeR7I	CTCGAG	1 cut(s)	2178
PagI	TCATGA	3 cut(s)	12, 424, 2325
PaqCI	CACCTGC	1 cut(s)	1979
PciI	ACATGT	3 cut(s)	827, 891, 1980
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PctI	GAATGC	6 cut(s)	66, 177, 505, 1561, 2209, 2301
PdmI	GAANNNNTTC	3 cut(s)	1087, 1833, 2420
PinAI	ACCGGT	1 cut(s)	2418
PkrI	GCNGC	8 cut(s)	100, 176, 242, 556, 702, 1682, 1803, 2456
PleI	GAGTC	3 cut(s)	31, 137, 2450
PpsI	GAGTC	3 cut(s)	31, 137, 2450
Ppu21I	YACGTR	1 cut(s)	1770
PscI	ACATGT	3 cut(s)	827, 891, 1980
PshBI	ATTAAT	2 cut(s)	564, 1694
PsiI	TTATAA	1 cut(s)	2405
Psp6I	CCWGG	3 cut(s)	133, 404, 2059
PspGI	CCWGG	3 cut(s)	133, 404, 2059
PspN4I	GGNNCC	4 cut(s)	843, 942, 2058, 2423
PspPI	GGNCC	2 cut(s)	1396, 2209
PspXI	VCTCGAGB	1 cut(s)	2178
PsuI	RGATCY	3 cut(s)	385, 841, 2395
RruI	TCGCGA	1 cut(s)	797
RsaI	GTAC	3 cut(s)	942, 1985, 2388
RsaNI	GTAC	3 cut(s)	941, 1984, 2387
RseI	CAYNNNNRTG	2 cut(s)	2085, 2433
SatI	GCNGC	8 cut(s)	99, 175, 241, 555, 701, 1681, 1802, 2455
Sau96I	GGNCC	2 cut(s)	1396, 2209
SchI	GAGTC	3 cut(s)	31, 137, 2451
ScrFI	CCNGG	3 cut(s)	135, 406, 2061
SduI	GDGCHC	1 cut(s)	1366
SexAI	ACCWGGT	1 cut(s)	2059
SfaNI	GCATC	6 cut(s)	47, 295, 421, 889, 912, 1667
Sfr274I	CTCGAG	1 cut(s)	2178
SfuI	TTCGAA	2 cut(s)	1012, 2293
SinI	GGWCC	2 cut(s)	1396, 2209
SlaI	CTCGAG	1 cut(s)	2178
SmiMI	CAYNNNNRTG	2 cut(s)	2085, 2433
SmlI	CTYRAG	4 cut(s)	695, 761, 1357, 2178
SmoI	CTYRAG	4 cut(s)	695, 761, 1357, 2178
Sse9I	AATT	4 cut(s)	21, 195, 651, 1502
SsiI	CCGC	5 cut(s)	98, 995, 1203, 2207, 2454
SspMI	CTAG	4 cut(s)	768, 779, 1280, 1848
StyD4I	CCNGG	3 cut(s)	133, 404, 2059
StyI	CCWWGG	3 cut(s)	497, 944, 1111
TaaI	ACNGT	5 cut(s)	158, 607, 980, 1258, 2360
TaiI	ACGT	4 cut(s)	444, 1772, 2013, 2193
TasI	AATT	4 cut(s)	21, 195, 651, 1502
TauI	GCSGC	2 cut(s)	101, 2457
TscAI	CASTG	4 cut(s)	1461, 2110, 2365, 2468
TseI	GCWGC	6 cut(s)	174, 240, 554, 700, 1680, 1801
TspGWI	ACGGA	2 cut(s)	158, 2353
TspRI	CASTG	4 cut(s)	1461, 2110, 2365, 2468
Vha464I	CTTAAG	2 cut(s)	695, 761
VpaK11BI	GGWCC	2 cut(s)	1396, 2209
VspI	ATTAAT	2 cut(s)	564, 1694
XapI	RAATTY	1 cut(s)	1502
XceI	RCATGY	4 cut(s)	831, 895, 1309, 1984
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1585
XhoI	CTCGAG	1 cut(s)	2178
XmiI	GTMKAC	2 cut(s)	875, 1594
XmnI	GAANNNNTTC	3 cut(s)	1087, 1833, 2420
XspI	CTAG	4 cut(s)	768, 779, 1280, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.