Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011332

Physical Location & Seq

Genomic Coordinates Reverse (-)

23323593 .. 23330040

Gene Structure 6448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G218200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGCTTAGATTGATTTGTCAAAAAACGTTTCAGTGTGCAAATTTCGCTACGCATTGTAAAACCAACGCTCGGATTAGCTTTTCGCGATGTGGGTACGCTGCCCAAGCAGCAGCAGCTGCCTCATTGCCCCAACACCCCCCTGTCCACGCAGAGCTTCCCAACTCGGAGTTCGACTCTCACGCATACGCTGCTATGCTTCAACATTGTATCCGAAACGGTGACTCGAATTCCGCAATGGTTCTTCACTGCGGGATCTTGAAGAAAGGTGGTTGCTTGGACTTGTTTGCTCTCAACATTCTTATTAATATGTACGTGAAAGCGGGTATGCTGTCTAATGCCACTACGCTGTTTGACGAAATGTCTGAAAGAAATACTATTTCTTTTGTTACGTTGATCCAGGGATTTGCGGACTCTCAACGTTTTTTTGATTCCGTAGAGTTGTTTCGCCGGCTGCATACAGAAGGCCATGAGCTTAACCAATTTGTTTTTACTACAATTTTGAAGTTACTTGTGAGGATGGGATGGGCTGAGCTGGCTTGGACCATCCATGCTTGTATTCATAAGCTTGCACATGGCTCTAATGCCTTTGTTGGGACTGCTCTCATTGATGCCTACTCTGTTTGCAGCCACGTTGATGTTTCTCGGGATGTTTTTGATGAGATTGTTTGTAAGGATATGGTAGCTTGGACTGGGATGGTAGCATGCTATGCTGAGAATGGCTGTTTTGAAGAAGCACTCAAACTCTTCAGTCAAATGCGGATGATTGGATTCAAGCCTAACAATTATACTTTTACGGGTGTGCTTAAGGCCTGTGTTGGTTTAGAGGCCTTAAATGAAGGGAAGAGCGTCCATGGGTGTGTAATGAAATCATGTTATGAAGGGGATCTATATGTGGGTACTGCATTGCTTGATATGTACACCAAGTTTGGAGATGTTGAGGAGGCTCGGCAAGTATTTCAAGAGATACCCAAAAATGACGTGGTTCCTTGGAGCCTCATGGTTTCACGGTGTGCTCAGAGTGACCGTTGTGAAGAGGCTCTGGACTTGTTTTGTCGGATGAGGCAAGCATTTGTTGTTCCCAACCAGTTTACATATGCTAGCACACTTCAAGCTTGTGCAACTATGGAGCGTCTAGATTTTGGGAAGCAAATCCATTGCCATGTAATCAAGGTTGGTCTTGATTCAGATGTCTTTGTTTCAAATGCTCTCATGGGTGTCTATGCTAAATGCGGAAAGTTAGAGAATTCTATGGACTTATTTGTGGAATCACCAAATAGAAATGATGTATCTTGGAACACGATGATTGTTGGATATGTTCAGTTAGGTGATGGGGAGAAGGCGTTGGCTTTGTTTTCAAATATGCTTAGATGCCAAGTGCAGGCTACAGAAGTGACGTACTCTAGTGCGCTCCGTGCTTCTGCTAGCCTAGCAGCATTGGAGCCAGGAGTTCAGATACATTCTATAACGGTCAAAACCATATATGACAAAGATACTGTAGTGGGTAATTCTTTAATAGACATGTATGCTAAGTGTGGGAGCATCAAAGACGCCCGCCTGGTGTTTGATAAGTTGAAGCAACGAGATGAGGTTTCATGGAATGCGATGATCTCAGGATATTCTATGCATGGTCTTGGCCTGGAGGCTCTAAAGATTTTTGAAATGATGCAGGAAACAAATTGCAAACCAAACAAGTTAACTTTTGTCGGTATTTTGTCAGCATGTAGCAATGCAGGACTATTGGATCAAGGACAGGCTTATTTTAATTCTATGGTGCAGAACTATAACGTTGAACTGTGCGTAGAGCACTATACTTGTATGGTCTGGCTGTTAGGGAGATCAGGCCATCTTGATAAGGCTGTGAATTTGATTCAGGAAATCCCATTTGAACCTAGTGTTATGGTATGGCGTGCTTTGCTCGGAGCTTGTGTTATCCATAATGATGTGGAACTTGGAAGGATTGCTGCCCAGCATGTTCTTGAAATGGATCCCCAAGATGATGCTACCCACGTGTTATTGTCAAACATATATGCCACTGCAAGGAGATGGGATAACGTGGCTTCTGTCAGAAAAACCATGAAAAGGAAAGGAGTAAAGAAGGAACCCGGCCTAAGTTGGATTGAGAACCAGGGCACAGTTCATTATTTCAGTGTGGGGGATACTTCACATCCTGACATGAAACTGATCAACGGGATGCTGGAATGGTTGAAAATGAGAACTTTAAAGGCAGGACATGTTCCCAATTATAGTGCCGTTTTGCTTGATGTGGAGGATGATGAAAAGGAGCGCTTCTTGTGGGTACACAGTGAAAGGTTAGCTCTAGCATTTGGGTTAATTAGAACATCACCTGGGAGCCCTATTCGTATCATTAAAAACCTTCGAATATGTGTGGATTGCCATGCCACAGTGAAGTTAATATCAAAAGTAGTGCAGCGAGATATTGTTGTTCGAGATATCAATCGATTCCATCACTTTCAGAATGGAATTTGCTCTTGTGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

836

Amino Acids

93.38

Weight (kDa)

6.42

Isoelectric Point (pI)

32.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13230
fragaria_vesca	FvH4_4g22970 FvH4_4g22970
malus_domestica	MD13G1127800.v1.1
prunus_persica	Prupe.1G218200_v2.0.a1
pyrus_communis	pycom13g11070 pycom16g10860 pycom16g10870
rosa_chinensis	RchiOBHm_Chr4g0429241
rosa_laevigata	RLG00000007086
rosa_multiflora	Rmu_sc0000054.1_g000027
rosa_roxburghii	Rroxscaffold_5G00370870
rosa_rugosa	Rorug04G0234000 Rorug04G0234100 Rorug04G0234200 Rorug04G0234300 Rorug04G0234400
rosa_samantha	Rh4AG290100 Rh4BG295800
rosa_wichuraiana	Rw4G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	85
AciI	CCGC	7 cut(s)	231, 249, 320, 407, 757, 1230, 1552
AclI	AACGTT	3 cut(s)	26, 418, 1785
AclWI	GGATC	6 cut(s)	260, 388, 891, 1749, 1979, 1992
AcsI	RAATTY	5 cut(s)	40, 226, 1243, 1861, 2481
AcuI	CTGAAG	1 cut(s)	730
AcvI	CACGTG	1 cut(s)	2008
AcyI	GRCGYC	1 cut(s)	1548
AdeI	CACNNNGTG	1 cut(s)	1010
AfaI	GTAC	6 cut(s)	95, 311, 898, 917, 1397, 2298
AfeI	AGCGCT	1 cut(s)	2285
AfiI	CCNNNNNNNGG	5 cut(s)	69, 591, 1378, 2037, 2079
AflII	CTTAAG	1 cut(s)	803
AflIII	ACRYGT	3 cut(s)	1518, 2007, 2230
AhdI	GACNNNNNGTC	1 cut(s)	358
AjiI	CACGTC	1 cut(s)	979
AjnI	CCWGG	6 cut(s)	396, 1441, 1554, 1635, 2124, 2344
AjuI	GAANNNNNNNTTGG	2 cut(s)	152, 184
Alw21I	GWGCWC	2 cut(s)	1015, 1806
AlwI	GGATC	6 cut(s)	260, 388, 891, 1749, 1979, 1992
AlwNI	CAGNNNCTG	1 cut(s)	116
Ama87I	CYCGRG	1 cut(s)	642
Aor51HI	AGCGCT	1 cut(s)	2285
AoxI	GGCC	6 cut(s)	463, 807, 825, 1633, 1840, 2104
ApoI	RAATTY	5 cut(s)	40, 226, 1243, 1861, 2481
AseI	ATTAAT	1 cut(s)	303
AspLEI	GCGC	2 cut(s)	1408, 2286
AspS9I	GGNCC	1 cut(s)	540
AsuC2I	CCSGG	1 cut(s)	2103
AsuHPI	GGTGA	5 cut(s)	230, 1260, 1337, 2334, 2507
AsuII	TTCGAA	1 cut(s)	2377
AsuNHI	GCTAGC	2 cut(s)	1097, 1421
AvaI	CYCGRG	1 cut(s)	642
AvaII	GGWCC	1 cut(s)	540
BaeGI	GKGCMC	1 cut(s)	2132
BaeI	ACNNNNGTAYC	2 cut(s)	1482, 1515
BamHI	GGATCC	1 cut(s)	1984
BanII	GRGCYC	1 cut(s)	2354
BbrPI	CACGTG	1 cut(s)	2008
Bbv12I	GWGCWC	2 cut(s)	1015, 1806
BccI	CCATC	8 cut(s)	511, 516, 551, 688, 1322, 1851, 2037, 2472
BceAI	ACGGC	1 cut(s)	2234
BciT130I	CCWGG	6 cut(s)	398, 1443, 1556, 1637, 2126, 2346
BciVI	GTATCC	2 cut(s)	218, 2149
BclI	TGATCA	1 cut(s)	2181
BcnI	CCSGG	1 cut(s)	2103
BfaI	CTAG	7 cut(s)	1098, 1133, 1401, 1422, 1427, 1890, 2318
BfmI	CTRYAG	2 cut(s)	1383, 1494
BfoI	RGCGCY	1 cut(s)	2287
BfrI	CTTAAG	1 cut(s)	803
BfuI	GTATCC	2 cut(s)	218, 2149
BlpI	GCTNAGC	1 cut(s)	528
Bme1390I	CCNGG	7 cut(s)	398, 1443, 1556, 1637, 2103, 2126, 2346
Bme18I	GGWCC	1 cut(s)	540
BmeRI	GACNNNNNGTC	1 cut(s)	358
BmeT110I	CYCGRG	1 cut(s)	642
BmgBI	CACGTC	1 cut(s)	979
BmgT120I	GGNCC	1 cut(s)	540
BmiI	GGNNCC	6 cut(s)	984, 992, 1440, 1986, 2100, 2351
BmrFI	CCNGG	7 cut(s)	398, 1443, 1556, 1637, 2103, 2126, 2346
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	6 cut(s)	598, 1358, 1548, 1653, 1987, 2181
BmtI	GCTAGC	2 cut(s)	1101, 1425
BmuI	ACTGGG	1 cut(s)	699
BplI	GAGNNNNNCTC	2 cut(s)	158, 190
BpmI	CTGGAG	1 cut(s)	1658
Bpu1102I	GCTNAGC	1 cut(s)	528
Bpu14I	TTCGAA	1 cut(s)	2377
BpuMI	CCSGG	1 cut(s)	2103
Bsa29I	ATCGAT	1 cut(s)	2458
BsaAI	YACGTR	2 cut(s)	313, 2008
BsaBI	GATNNNNATC	1 cut(s)	2454
BsaHI	GRCGYC	1 cut(s)	1548
BsaJI	CCNNGG	5 cut(s)	397, 850, 986, 2125, 2345
BsaXI	ACNNNNNCTCC	4 cut(s)	1325, 1355, 1911, 1941
Bsc4I	CCNNNNNNNGG	5 cut(s)	69, 591, 1378, 2037, 2079
Bse118I	RCCGGY	1 cut(s)	447
Bse1I	ACTGG	3 cut(s)	694, 1084, 2507
Bse3DI	GCAATG	5 cut(s)	122, 240, 902, 1153, 1732
Bse8I	GATNNNNATC	1 cut(s)	2454
BseBI	CCWGG	6 cut(s)	398, 1443, 1556, 1637, 2126, 2346
BseCI	ATCGAT	1 cut(s)	2458
BseDI	CCNNGG	5 cut(s)	397, 850, 986, 2125, 2345
BseJI	GATNNNNATC	1 cut(s)	2454
BseLI	CCNNNNNNNGG	5 cut(s)	69, 591, 1378, 2037, 2079
BseMI	GCAATG	5 cut(s)	122, 240, 902, 1153, 1732
BseMII	CTCAG	4 cut(s)	519, 702, 1028, 1623
BseNI	ACTGG	3 cut(s)	694, 1084, 2507
BseRI	GAGGAG	1 cut(s)	953
BseSI	GKGCMC	1 cut(s)	2132
BseYI	CCCAGC	1 cut(s)	1965
BsgI	GTGCAG	3 cut(s)	1397, 1793, 2447
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	6 cut(s)	465, 809, 827, 1635, 1842, 2106
BshVI	ATCGAT	1 cut(s)	2458
BsiHKAI	GWGCWC	2 cut(s)	1015, 1806
BsiHKCI	CYCGRG	1 cut(s)	642
BsiSI	CCGG	2 cut(s)	448, 2103
BslFI	GGGAC	1 cut(s)	607
BslI	CCNNNNNNNGG	5 cut(s)	69, 591, 1378, 2037, 2079
BsmFI	GGGAC	1 cut(s)	607
BsmI	GAATGC	1 cut(s)	1603
BsnI	GGCC	6 cut(s)	465, 809, 827, 1635, 1842, 2106
BsoBI	CYCGRG	1 cut(s)	642
Bsp119I	TTCGAA	1 cut(s)	2377
Bsp1286I	GDGCHC	4 cut(s)	1015, 1806, 2132, 2354
Bsp1407I	TGTACA	1 cut(s)	915
Bsp143I	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
Bsp1720I	GCTNAGC	1 cut(s)	528
Bsp19I	CCATGG	1 cut(s)	850
Bsp68I	TCGCGA	1 cut(s)	85
BspACI	CCGC	7 cut(s)	231, 249, 320, 407, 757, 1230, 1552
BspANI	GGCC	6 cut(s)	465, 809, 827, 1635, 1842, 2106
BspCNI	CTCAG	4 cut(s)	520, 703, 1027, 1622
BspDI	ATCGAT	1 cut(s)	2458
BspFNI	CGCG	1 cut(s)	85
BspLI	GGNNCC	6 cut(s)	984, 992, 1440, 1986, 2100, 2351
BspOI	GCTAGC	2 cut(s)	1101, 1425
BspPI	GGATC	6 cut(s)	260, 388, 891, 1749, 1979, 1992
BspQI	GCTCTTC	1 cut(s)	836
BspT104I	TTCGAA	1 cut(s)	2377
BspTI	CTTAAG	1 cut(s)	803
BsrDI	GCAATG	5 cut(s)	122, 240, 902, 1153, 1732
BsrFI	RCCGGY	1 cut(s)	447
BsrGI	TGTACA	1 cut(s)	915
BsrI	ACTGG	3 cut(s)	694, 1084, 2507
BssAI	RCCGGY	1 cut(s)	447
BssECI	CCNNGG	5 cut(s)	397, 850, 986, 2125, 2345
BssMI	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
BssNI	GRCGYC	1 cut(s)	1548
BssT1I	CCWWGG	2 cut(s)	850, 986
Bst2UI	CCWGG	6 cut(s)	398, 1443, 1556, 1637, 2126, 2346
Bst4CI	ACNGT	9 cut(s)	218, 1008, 1025, 1468, 1495, 1794, 2134, 2303, 2404
Bst6I	CTCTTC	3 cut(s)	749, 836, 1026
BstACI	GRCGYC	1 cut(s)	1548
BstAFI	CTTAAG	1 cut(s)	803
BstAPI	GCANNNNNTGC	3 cut(s)	116, 188, 707
BstAUI	TGTACA	1 cut(s)	915
BstBAI	YACGTR	2 cut(s)	313, 2008
BstBI	TTCGAA	1 cut(s)	2377
BstDEI	CTNAG	8 cut(s)	5, 528, 711, 1014, 1364, 1527, 1609, 2108
BstDSI	CCRYGG	1 cut(s)	850
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	1 cut(s)	2287
BstHHI	GCGC	2 cut(s)	1408, 2286
BstKTI	GATC	8 cut(s)	255, 396, 886, 1608, 1744, 1838, 1987, 2184
BstMBI	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
BstNI	CCWGG	6 cut(s)	398, 1443, 1556, 1637, 2126, 2346
BstNSI	RCATGY	5 cut(s)	705, 1522, 1722, 1973, 2234
BstSCI	CCNGG	7 cut(s)	396, 1441, 1554, 1635, 2101, 2124, 2344
BstSFI	CTRYAG	2 cut(s)	1383, 1494
BstSLI	GKGCMC	1 cut(s)	2132
BstUI	CGCG	1 cut(s)	85
BstX2I	RGATCY	3 cut(s)	252, 883, 1984
BstYI	RGATCY	3 cut(s)	252, 883, 1984
Bsu15I	ATCGAT	1 cut(s)	2458
BsuI	GTATCC	2 cut(s)	218, 2149
BsuRI	GGCC	6 cut(s)	465, 809, 827, 1635, 1842, 2106
BsuTUI	ATCGAT	1 cut(s)	2458
BtgI	CCRYGG	1 cut(s)	850
BtgZI	GCGATG	2 cut(s)	100, 1616
BtrI	CACGTC	1 cut(s)	979
BtsI	GCAGTG	2 cut(s)	244, 2031
BtsIMutI	CAGTG	6 cut(s)	38, 244, 2031, 2152, 2308, 2409
BtuMI	TCGCGA	1 cut(s)	85
CaiI	CAGNNNCTG	1 cut(s)	116
CfoI	GCGC	2 cut(s)	1408, 2286
Cfr10I	RCCGGY	1 cut(s)	447
Cfr13I	GGNCC	1 cut(s)	540
ClaI	ATCGAT	1 cut(s)	2458
CseI	GACGC	3 cut(s)	835, 1118, 1556
Csp6I	GTAC	6 cut(s)	94, 310, 897, 916, 1396, 2297
CviQI	GTAC	6 cut(s)	94, 310, 897, 916, 1396, 2297
DdeI	CTNAG	8 cut(s)	5, 528, 711, 1014, 1364, 1527, 1609, 2108
DpnI	GATC	8 cut(s)	254, 395, 885, 1607, 1743, 1837, 1986, 2183
DpnII	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
DraI	TTTAAA	1 cut(s)	2220
DraIII	CACNNNGTG	1 cut(s)	1010
DriI	GACNNNNNGTC	1 cut(s)	358
Eam1104I	CTCTTC	3 cut(s)	749, 836, 1026
Eam1105I	GACNNNNNGTC	1 cut(s)	358
EarI	CTCTTC	3 cut(s)	749, 836, 1026
Eco130I	CCWWGG	2 cut(s)	850, 986
Eco147I	AGGCCT	2 cut(s)	809, 827
Eco24I	GRGCYC	1 cut(s)	2354
Eco32I	GATATC	1 cut(s)	2452
Eco47I	GGWCC	1 cut(s)	540
Eco47III	AGCGCT	1 cut(s)	2285
Eco57I	CTGAAG	1 cut(s)	730
Eco72I	CACGTG	1 cut(s)	2008
Eco88I	CYCGRG	1 cut(s)	642
EcoRI	GAATTC	2 cut(s)	226, 1243
EcoRII	CCWGG	6 cut(s)	396, 1441, 1554, 1635, 2124, 2344
EcoRV	GATATC	1 cut(s)	2452
EcoT14I	CCWWGG	2 cut(s)	850, 986
EcoT22I	ATGCAT	1 cut(s)	1626
EcoT38I	GRGCYC	1 cut(s)	2354
ErhI	CCWWGG	2 cut(s)	850, 986
FalI	AAGNNNNNCTT	2 cut(s)	2270, 2302
FaqI	GGGAC	1 cut(s)	607
FauI	CCCGC	3 cut(s)	242, 313, 1559
FauNDI	CATATG	1 cut(s)	1093
FbaI	TGATCA	1 cut(s)	2181
FriOI	GRGCYC	1 cut(s)	2354
FspBI	CTAG	7 cut(s)	1098, 1133, 1401, 1422, 1427, 1890, 2318
GlaI	GCGC	2 cut(s)	1407, 2285
GsaI	CCCAGC	1 cut(s)	1969
GsuI	CTGGAG	1 cut(s)	1658
HaeII	RGCGCY	1 cut(s)	2287
HaeIII	GGCC	6 cut(s)	465, 809, 827, 1635, 1842, 2106
HapII	CCGG	2 cut(s)	448, 2103
HgaI	GACGC	3 cut(s)	835, 1118, 1556
HhaI	GCGC	2 cut(s)	1408, 2286
Hin1I	GRCGYC	1 cut(s)	1548
Hin6I	GCGC	2 cut(s)	1406, 2284
HinP1I	GCGC	2 cut(s)	1406, 2284
HincII	GTYRAC	1 cut(s)	1695
HindII	GTYRAC	1 cut(s)	1695
HindIII	AAGCTT	2 cut(s)	563, 1110
HinfI	GANTC	9 cut(s)	173, 221, 410, 428, 768, 1181, 1265, 1867, 2460
HpaI	GTTAAC	1 cut(s)	1695
HpaII	CCGG	2 cut(s)	448, 2103
HphI	GGTGA	5 cut(s)	230, 1260, 1337, 2334, 2507
Hpy166II	GTNNAC	5 cut(s)	145, 918, 1089, 1695, 2299
Hpy8I	GTNNAC	5 cut(s)	145, 918, 1089, 1695, 2299
HpyAV	CCTTC	7 cut(s)	455, 830, 872, 1330, 1947, 2089, 2384
HpyCH4III	ACNGT	9 cut(s)	218, 1008, 1025, 1468, 1495, 1794, 2134, 2303, 2404
HpyF3I	CTNAG	8 cut(s)	5, 528, 711, 1014, 1364, 1527, 1609, 2108
Hsp92I	GRCGYC	1 cut(s)	1548
HspAI	GCGC	2 cut(s)	1406, 2284
KroI	GCCGGC	1 cut(s)	447
KroNI	GCCGGC	1 cut(s)	449
Ksp22I	TGATCA	1 cut(s)	2181
KspAI	GTTAAC	1 cut(s)	1695
Kzo9I	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
LguI	GCTCTTC	1 cut(s)	836
LmnI	GCTCC	8 cut(s)	990, 1126, 1413, 1438, 1536, 1919, 2281, 2349
LweI	GCATC	6 cut(s)	598, 1358, 1548, 1653, 1987, 2181
MaeI	CTAG	7 cut(s)	1098, 1133, 1401, 1422, 1427, 1890, 2318
MaeIII	GTNAC	5 cut(s)	218, 385, 504, 1019, 1390
MalI	GATC	8 cut(s)	254, 395, 885, 1607, 1743, 1837, 1986, 2183
MboI	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
MboII	GAAGA	6 cut(s)	233, 271, 736, 740, 853, 1043
MflI	RGATCY	3 cut(s)	252, 883, 1984
MhlI	GDGCHC	4 cut(s)	1015, 1806, 2132, 2354
MlyI	GAGTC	3 cut(s)	167, 215, 404
MmeI	TCCRAC	3 cut(s)	1034, 1288, 2093
Mph1103I	ATGCAT	1 cut(s)	1626
MroNI	GCCGGC	1 cut(s)	447
MslI	CAYNNNNRTG	4 cut(s)	633, 855, 1158, 1938
MspA1I	CMGCKG	1 cut(s)	116
MspCI	CTTAAG	1 cut(s)	803
MspI	CCGG	2 cut(s)	448, 2103
MspR9I	CCNGG	7 cut(s)	398, 1443, 1556, 1637, 2103, 2126, 2346
Mva1269I	GAATGC	1 cut(s)	1603
MvaI	CCWGG	6 cut(s)	398, 1443, 1556, 1637, 2126, 2346
MvnI	CGCG	1 cut(s)	85
NaeI	GCCGGC	1 cut(s)	449
NciI	CCSGG	1 cut(s)	2103
NcoI	CCATGG	1 cut(s)	850
NdeI	CATATG	1 cut(s)	1093
NdeII	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
NgoMIV	GCCGGC	1 cut(s)	447
NheI	GCTAGC	2 cut(s)	1097, 1421
NlaIV	GGNNCC	6 cut(s)	984, 992, 1440, 1986, 2100, 2351
NmeAIII	GCCGAG	1 cut(s)	925
NmuCI	GTSAC	3 cut(s)	218, 1019, 1390
NruI	TCGCGA	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	1626
NspI	RCATGY	5 cut(s)	705, 1522, 1722, 1973, 2234
NspV	TTCGAA	1 cut(s)	2377
PaeI	GCATGC	1 cut(s)	705
PceI	AGGCCT	2 cut(s)	809, 827
PciI	ACATGT	2 cut(s)	1518, 2230
PciSI	GCTCTTC	1 cut(s)	836
PctI	GAATGC	1 cut(s)	1603
PdiI	GCCGGC	1 cut(s)	449
PfeI	GAWTC	6 cut(s)	428, 768, 1181, 1265, 1867, 2460
PleI	GAGTC	3 cut(s)	167, 215, 404
PmaCI	CACGTG	1 cut(s)	2008
PmlI	CACGTG	1 cut(s)	2008
PpsI	GAGTC	3 cut(s)	167, 215, 404
Ppu21I	YACGTR	2 cut(s)	313, 2008
PscI	ACATGT	2 cut(s)	1518, 2230
PshBI	ATTAAT	1 cut(s)	303
Psp1406I	AACGTT	3 cut(s)	26, 418, 1785
Psp6I	CCWGG	6 cut(s)	396, 1441, 1554, 1635, 2124, 2344
PspCI	CACGTG	1 cut(s)	2008
PspFI	CCCAGC	1 cut(s)	1965
PspGI	CCWGG	6 cut(s)	396, 1441, 1554, 1635, 2124, 2344
PspN4I	GGNNCC	6 cut(s)	984, 992, 1440, 1986, 2100, 2351
PspPI	GGNCC	1 cut(s)	540
PstNI	CAGNNNCTG	1 cut(s)	116
PsuI	RGATCY	3 cut(s)	252, 883, 1984
PvuII	CAGCTG	1 cut(s)	116
RruI	TCGCGA	1 cut(s)	85
RsaI	GTAC	6 cut(s)	95, 311, 898, 917, 1397, 2298
RsaNI	GTAC	6 cut(s)	94, 310, 897, 916, 1396, 2297
RseI	CAYNNNNRTG	4 cut(s)	633, 855, 1158, 1938
SapI	GCTCTTC	1 cut(s)	836
Sau3AI	GATC	8 cut(s)	252, 393, 883, 1605, 1741, 1835, 1984, 2181
Sau96I	GGNCC	1 cut(s)	540
SchI	GAGTC	3 cut(s)	167, 215, 404
ScrFI	CCNGG	7 cut(s)	398, 1443, 1556, 1637, 2103, 2126, 2346
SduI	GDGCHC	4 cut(s)	1015, 1806, 2132, 2354
SfaNI	GCATC	6 cut(s)	598, 1358, 1548, 1653, 1987, 2181
SfcI	CTRYAG	2 cut(s)	1383, 1494
SfuI	TTCGAA	1 cut(s)	2377
SinI	GGWCC	1 cut(s)	540
SmiMI	CAYNNNNRTG	4 cut(s)	633, 855, 1158, 1938
SmlI	CTYRAG	1 cut(s)	803
SmoI	CTYRAG	1 cut(s)	803
SphI	GCATGC	1 cut(s)	705
SseBI	AGGCCT	2 cut(s)	809, 827
SsiI	CCGC	7 cut(s)	231, 249, 320, 407, 757, 1230, 1552
SspMI	CTAG	7 cut(s)	1098, 1133, 1401, 1422, 1427, 1890, 2318
StuI	AGGCCT	2 cut(s)	809, 827
StyD4I	CCNGG	7 cut(s)	396, 1441, 1554, 1635, 2101, 2124, 2344
StyI	CCWWGG	2 cut(s)	850, 986
TaaI	ACNGT	9 cut(s)	218, 1008, 1025, 1468, 1495, 1794, 2134, 2303, 2404
TaqI	TCGA	5 cut(s)	171, 224, 2377, 2446, 2458
TatI	WGTACW	1 cut(s)	915
TfiI	GAWTC	6 cut(s)	428, 768, 1181, 1265, 1867, 2460
TscAI	CASTG	6 cut(s)	38, 251, 2038, 2152, 2308, 2409
TseFI	GTSAC	3 cut(s)	218, 1019, 1390
Tsp45I	GTSAC	3 cut(s)	218, 1019, 1390
TspDTI	ATGAA	9 cut(s)	548, 849, 878, 891, 1581, 2090, 2126, 2189, 2289
TspGWI	ACGGA	2 cut(s)	421, 1400
TspRI	CASTG	6 cut(s)	38, 251, 2038, 2152, 2308, 2409
Vha464I	CTTAAG	1 cut(s)	803
VpaK11BI	GGWCC	1 cut(s)	540
VspI	ATTAAT	1 cut(s)	303
XapI	RAATTY	5 cut(s)	40, 226, 1243, 1861, 2481
XbaI	TCTAGA	1 cut(s)	1132
XceI	RCATGY	5 cut(s)	705, 1522, 1722, 1973, 2234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	976
XspI	CTAG	7 cut(s)	1098, 1133, 1401, 1422, 1427, 1890, 2318
Zsp2I	ATGCAT	1 cut(s)	1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.