Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13230 |
| fragaria_vesca | FvH4_4g22970 FvH4_4g22970 |
| malus_domestica | MD13G1127800.v1.1 |
| prunus_persica | Prupe.1G218200_v2.0.a1 |
| pyrus_communis | pycom13g11070 pycom16g10860 pycom16g10870 |
| rosa_chinensis | RchiOBHm_Chr4g0429241 |
| rosa_laevigata | RLG00000007086 |
| rosa_multiflora | Rmu_sc0000054.1_g000027 |
| rosa_roxburghii | Rroxscaffold_5G00370870 |
| rosa_rugosa | Rorug04G0234000 Rorug04G0234100 Rorug04G0234200 Rorug04G0234300 Rorug04G0234400 |
| rosa_samantha | Rh4AG290100 Rh4BG295800 |
| rosa_wichuraiana | Rw4G025120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 47 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 224, 256 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw26I | GTCTC | 1 cut(s) | 241 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 221 |
| ApeKI | GCWGC | 2 cut(s) | 164, 269 |
| BbvI | GCAGC | 2 cut(s) | 151, 256 |
| BccI | CCATC | 1 cut(s) | 205 |
| BcoDI | GTCTC | 1 cut(s) | 241 |
| BfmI | CTRYAG | 2 cut(s) | 200, 253 |
| BisI | GCNGC | 2 cut(s) | 165, 270 |
| BlsI | GCNGC | 2 cut(s) | 166, 271 |
| BpuEI | CTTGAG | 1 cut(s) | 305 |
| BsaI | GGTCTC | 1 cut(s) | 241 |
| BsaJI | CCNNGG | 1 cut(s) | 231 |
| BseDI | CCNNGG | 1 cut(s) | 231 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 2 cut(s) | 33, 172 |
| BseXI | GCAGC | 2 cut(s) | 151, 256 |
| BslFI | GGGAC | 1 cut(s) | 181 |
| BsmAI | GTCTC | 1 cut(s) | 241 |
| BsmFI | GGGAC | 1 cut(s) | 181 |
| Bso31I | GGTCTC | 1 cut(s) | 241 |
| BspCNI | CTCAG | 2 cut(s) | 32, 171 |
| BspHI | TCATGA | 1 cut(s) | 187 |
| BspTNI | GGTCTC | 1 cut(s) | 241 |
| BssECI | CCNNGG | 1 cut(s) | 231 |
| BssT1I | CCWWGG | 1 cut(s) | 231 |
| BstC8I | GCNNGC | 1 cut(s) | 249 |
| BstDEI | CTNAG | 3 cut(s) | 19, 158, 261 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstMAI | GTCTC | 1 cut(s) | 241 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 227 |
| BstSFI | CTRYAG | 2 cut(s) | 200, 253 |
| BstV1I | GCAGC | 2 cut(s) | 151, 256 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 1 cut(s) | 249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 221 |
| CciI | TCATGA | 1 cut(s) | 187 |
| Csp6I | GTAC | 1 cut(s) | 46 |
| CviAII | CATG | 5 cut(s) | 41, 106, 133, 188, 295 |
| CviJI | RGCY | 4 cut(s) | 164, 230, 251, 269 |
| CviKI_1 | RGCY | 4 cut(s) | 164, 230, 251, 269 |
| CviQI | GTAC | 1 cut(s) | 46 |
| DdeI | CTNAG | 3 cut(s) | 19, 158, 261 |
| Eco130I | CCWWGG | 1 cut(s) | 231 |
| Eco31I | GGTCTC | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 231 |
| ErhI | CCWWGG | 1 cut(s) | 231 |
| FaeI | CATG | 5 cut(s) | 44, 109, 136, 191, 298 |
| FaiI | YATR | 7 cut(s) | 42, 107, 134, 189, 255, 281, 296 |
| FaqI | GGGAC | 1 cut(s) | 181 |
| FatI | CATG | 5 cut(s) | 40, 105, 132, 187, 294 |
| Fnu4HI | GCNGC | 2 cut(s) | 165, 270 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 2 cut(s) | 165, 270 |
| GluI | GCNGC | 2 cut(s) | 165, 270 |
| Hin1II | CATG | 5 cut(s) | 44, 109, 136, 191, 298 |
| HinfI | GANTC | 2 cut(s) | 17, 194 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 161 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 188 |
| HpyAV | CCTTC | 2 cut(s) | 23, 292 |
| HpyCH4V | TGCA | 2 cut(s) | 126, 167 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 227 |
| HpyF3I | CTNAG | 3 cut(s) | 19, 158, 261 |
| Hsp92II | CATG | 5 cut(s) | 44, 109, 136, 191, 298 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 2 cut(s) | 96, 257 |
| Lsp1109I | GCAGC | 2 cut(s) | 151, 256 |
| MluCI | AATT | 1 cut(s) | 183 |
| MlyI | GAGTC | 2 cut(s) | 11, 203 |
| MnlI | CCTC | 3 cut(s) | 19, 52, 258 |
| MseI | TTAA | 2 cut(s) | 90, 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 227 |
| NlaIII | CATG | 5 cut(s) | 44, 109, 136, 191, 298 |
| PagI | TCATGA | 1 cut(s) | 187 |
| PkrI | GCNGC | 2 cut(s) | 166, 271 |
| PleI | GAGTC | 2 cut(s) | 11, 202 |
| PpsI | GAGTC | 2 cut(s) | 11, 202 |
| PstNI | CAGNNNCTG | 1 cut(s) | 221 |
| RsaI | GTAC | 1 cut(s) | 47 |
| RsaNI | GTAC | 1 cut(s) | 46 |
| SaqAI | TTAA | 2 cut(s) | 90, 170 |
| SatI | GCNGC | 2 cut(s) | 165, 270 |
| SchI | GAGTC | 2 cut(s) | 11, 203 |
| SetI | ASST | 3 cut(s) | 80, 166, 237 |
| SfcI | CTRYAG | 2 cut(s) | 200, 253 |
| SmlI | CTYRAG | 1 cut(s) | 284 |
| SmoI | CTYRAG | 1 cut(s) | 284 |
| Sse9I | AATT | 1 cut(s) | 183 |
| StyI | CCWWGG | 1 cut(s) | 231 |
| TasI | AATT | 1 cut(s) | 183 |
| TatI | WGTACW | 1 cut(s) | 45 |
| Tru1I | TTAA | 2 cut(s) | 90, 170 |
| Tru9I | TTAA | 2 cut(s) | 90, 170 |
| TseI | GCWGC | 2 cut(s) | 164, 269 |
| TspDTI | ATGAA | 3 cut(s) | 122, 149, 176 |