Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0011332

Physical Location & Seq

Genomic Coordinates Forward (+)

7555628 .. 7558129

Gene Structure 2502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g11070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGCTTAGATTGCTTTCCCAGAGAACGTTGCACTCTGGAAATCTCGCTTCTCACTCCAAAACCACCGCCCTGACAACCTTTTCACGATGTGGGTTCGCCGCCCAAGCCGCCCAACTGCCCCCACCAAACTTCACCACCCACCCAGAGCTTCCCAGCTCAGAGTTCGACTCTCACGCATACGGCGTATTGCTCCAGCACTGCATCCGAAACGGCGACGCCAGGTCCGCAATGGGTCTTCATTGCGAGATTCTGAAGAAAGGCGGCTGCTTGGACTTGTTTGCTGACAACATTCTTCTCAATATGTATGTGAAGGCGGGTATGCTAATTGATGCCGCTAACCTGTTTGATGAAATGTCCAAGAGAAATGTTATTTCGTTCGTTACGTTGATCCAGGGGTTTTCGGATTACGGGTGTTTTGTTGATGCTGTAGAGTTGTTTAGTGGGCTGCATAGAGAAGGCCATGAGCTTAACCAATTTGTTTTTACTACGATTTTGAAGTTGCTTGTGAGGACGGGGTGGGCTGAGCTGGTTTGGACTGTTCATGCTTGTATTCATAAGCTTGCGCATGGGTCTAGTGCCTTCGTTGGGACTGCTCTCATTGATGCCTACTCTGTTTGCGGGTACGTTAATGTTGCTAGGGATGTTTTTGATGAGGTTGTTTGTAAAGATATGGTAGCTTGGACTGGGATGGTAGCATGTTATGCTGAGAATGGTTGTTCTGAAGAAGCACTCGAACTCTTCTCTCGAATGAGGGTGATTGGGTTCAGGCCTAATAATTATACTTTTACGGGTGCGCTTAAGGCTTGTGTGGGATTAGAGGCCTTAAATGGAGGGAAGAGTGTCCATGGGTGTGTGATAAAATCATGTTATGAAGGGGATCTGTATGTGGGTACGGCATTACTTGATTTGTACACCAAGTTTGGAGATATTGAGGAGGCTCGGCAAGTATTTCAAGAGATGCCCAAAAATGATGTGGTTCCTTGGAGCCTTATGGTTTCACGGTATGCTCAGAGTGACCGGTGTGAAGAGGCTCTGGACTTGTTTTGTCGGATGAGGCAAGCATTTGTTGTTCCAAACCAGTTTACATATGCTAGCACGCTGCAAGCTTGTGCAACTATGGAGCATTTAGATTTCGGTATGCAAATCCATTGCCATGTAACCAAGGTTGGTATTGATTCAGATGTCTATGTTTCAAATGCCCTCATGGGTGTCTATGCTAAATGTGGAAAGATAGATGACTCTATGGACTTATTTGTGGAATCACCAAATAGAAATGATGTATCTTGGAACACAATGATTGTTGGGTACACCCAGTTAGGTGATGGAGAGAAGGCATTGATGTTGTTTTCAGGTATGATTAAATGCCAAGTCGAGGCAACAGAAGTGACGTACTCTAGTGCTCTCCGTGCTTCTTCTGGCCTAGCAGCATTGGAATCAGGAGTTCAGATACATTCTGTAACAGTCAAAACCGTATATGACAAGGATACTGTAGTGGGTAATTCTTTAATAGACATGTATGCCAAATGTGGGAACATTAAAGATGCTCGCCTGGTGTTTGATAAGTTGAAGCAACGAGATGAGGTCTCATGGAATACCATGATCTCAGGGTATTCTATGCATGGCCTTGCCCTTGAGGCTCTAAAAGTCTTTGAAATGATGCAGGAAACAAATTGCAAACCAAACAAGTTAACTTTTGTTGGTGTCCTGTCAGCTTGCAGCAATGCAGGACTTCTAGATCAAGGACAAGCTTATTTTGATTCTATGGTACAAGACTATGATGTTGAACCATGCATAGAGCACTACACTTGTATGGTCTGGCTTTTAGGGCGATCAGGCCATCTTGATAAGGCTGTGAAGTTGATTAATGAAATCCCATTTGAACCTAGTATTATGGTGTGGCGTGCTTTGCTCGGAGCTTGTGTTATCCATAATGATGTCGAACTTGGAAGGATGGCTGCCAAGCATGTTCTTGAAATGGATCCTCAGGATGAGGCGACCCATGTGTTATTGTCAAACATATATGCCACCGCAAAGAGATGGGATAATGTAGCTTATGTTAGAAAAAATATGAAAAGGAAAGGAGTAAAGAAGGAACCTGGCTTAAGTTGGATTGAGAACCAGGGCACAGTACATTATTTCACTGTGGGCGATACTTCACATCCTGATATGAAACCGATCAACGGCATGCTGGAATGGTTGAAATTGAGAACCTTGAAGGCAGGACATGTTCCCAATTGTAATGCCATTTTGCTTGATGTGGCAGAGGATGAAAAGGAGCGTCTCTTGTGGGTACACAGTGAAAGATTAGCTCTAGCATTTGGGCTGATTAGAGCACCATCTGGGAGCCCCATTCGTATCATTAAAAATCTTCGGATATGTATGGATTGCCATGCCACAGTGAAGTTAATATCAAAGATTGTGCAGCGAGATATTATTGTTAGAGATCTCAATCGATTCCATCACTTTCAGGATGGAGTTTGCTCTTGTGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

834

Amino Acids

92.77

Weight (kDa)

6.04

Isoelectric Point (pI)

35.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	223 - 270	9.2e-09	PPR repeat family
PPR	PF01535	225 - 255	4.8e-06	PPR repeat
PPR_2	PF13041	324 - 371	1.6e-06	PPR repeat family
PPR_2	PF13041	425 - 470	3.5e-09	PPR repeat family
PPR	PF01535	427 - 456	1.2e-06	PPR repeat
PPR_2	PF13041	526 - 573	1.1e-11	PPR repeat family
PPR	PF01535	528 - 557	3.2e-08	PPR repeat
E_motif	PF20431	643 - 705	6.1e-24	E motif
DYW_deaminase	PF14432	741 - 833	3.2e-42	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13230
fragaria_vesca	FvH4_4g22970 FvH4_4g22970
malus_domestica	MD13G1127800.v1.1
prunus_persica	Prupe.1G218200_v2.0.a1
pyrus_communis	pycom13g11070 pycom16g10860 pycom16g10870
rosa_chinensis	RchiOBHm_Chr4g0429241
rosa_laevigata	RLG00000007086
rosa_multiflora	Rmu_sc0000054.1_g000027
rosa_roxburghii	Rroxscaffold_5G00370870
rosa_rugosa	Rorug04G0234000 Rorug04G0234100 Rorug04G0234200 Rorug04G0234300 Rorug04G0234400
rosa_samantha	Rh4AG290100 Rh4BG295800
rosa_wichuraiana	Rw4G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	564
AciI	CCGC	9 cut(s)	66, 99, 108, 225, 261, 314, 333, 618, 2028
AclI	AACGTT	1 cut(s)	26
AclWI	GGATC	4 cut(s)	382, 885, 1973, 1986
AcuI	CTGAAG	2 cut(s)	272, 741
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	1 cut(s)	89
AfaI	GTAC	8 cut(s)	623, 892, 911, 1307, 1391, 1767, 2130, 2292
AfiI	CCNNNNNNNGG	4 cut(s)	585, 1372, 1527, 2180
AflII	CTTAAG	2 cut(s)	797, 2101
AflIII	ACRYGT	2 cut(s)	1512, 2224
AgeI	ACCGGT	1 cut(s)	1017
AhdI	GACNNNNNGTC	1 cut(s)	220
AjnI	CCWGG	5 cut(s)	218, 390, 1548, 2095, 2118
Alw21I	GWGCWC	3 cut(s)	1402, 1800, 2335
Alw26I	GTCTC	2 cut(s)	1588, 2285
AlwI	GGATC	4 cut(s)	382, 885, 1973, 1986
AoxI	GGCC	6 cut(s)	457, 767, 819, 1417, 1621, 1834
ApeKI	GCWGC	7 cut(s)	264, 445, 1099, 1424, 1716, 1955, 2422
AseI	ATTAAT	1 cut(s)	1863
AsiGI	ACCGGT	1 cut(s)	1017
AspLEI	GCGC	2 cut(s)	565, 796
AspS9I	GGNCC	1 cut(s)	222
AsuHPI	GGTGA	5 cut(s)	124, 766, 1254, 1331, 2501
AsuNHI	GCTAGC	1 cut(s)	1091
AvaII	GGWCC	1 cut(s)	222
AxyI	CCTNAGG	1 cut(s)	1983
BaeGI	GKGCMC	1 cut(s)	2126
BaeI	ACNNNNGTAYC	2 cut(s)	1476, 1509
BamHI	GGATCC	1 cut(s)	1978
BanII	GRGCYC	1 cut(s)	2348
BbsI	GAAGAC	1 cut(s)	227
Bbv12I	GWGCWC	3 cut(s)	1402, 1800, 2335
BbvI	GCAGC	7 cut(s)	251, 432, 1086, 1436, 1728, 1942, 2434
BccI	CCATC	8 cut(s)	682, 1316, 1845, 1945, 2031, 2344, 2465, 2466
BceAI	ACGGC	4 cut(s)	196, 226, 909, 2197
BciT130I	CCWGG	5 cut(s)	220, 392, 1550, 2097, 2120
BciVI	GTATCC	1 cut(s)	1477
BcoDI	GTCTC	2 cut(s)	1588, 2285
BfaI	CTAG	8 cut(s)	573, 636, 1092, 1395, 1421, 1733, 1884, 2312
BfmI	CTRYAG	2 cut(s)	426, 1488
BfrI	CTTAAG	2 cut(s)	797, 2101
BfuI	GTATCC	1 cut(s)	1477
BglI	GCCNNNNNGGC	1 cut(s)	1634
BglII	AGATCT	1 cut(s)	2443
BlpI	GCTNAGC	1 cut(s)	522
Bme1390I	CCNGG	5 cut(s)	220, 392, 1550, 2097, 2120
Bme18I	GGWCC	1 cut(s)	222
BmeRI	GACNNNNNGTC	1 cut(s)	220
BmgT120I	GGNCC	1 cut(s)	222
BmiI	GGNNCC	5 cut(s)	978, 986, 1980, 2094, 2345
BmrFI	CCNGG	5 cut(s)	220, 392, 1550, 2097, 2120
BmrI	ACTGGG	2 cut(s)	693, 1306
BmsI	GCATC	7 cut(s)	210, 319, 412, 592, 948, 1531, 1647
BmtI	GCTAGC	1 cut(s)	1095
BmuI	ACTGGG	2 cut(s)	693, 1306
BpiI	GAAGAC	1 cut(s)	227
BplI	GAGNNNNNCTC	2 cut(s)	152, 184
BpmI	CTGGAG	1 cut(s)	176
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	1652
Bsa29I	ATCGAT	1 cut(s)	2452
BsaBI	GATNNNNATC	1 cut(s)	2448
BsaHI	GRCGYC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	1588
BsaJI	CCNNGG	5 cut(s)	391, 844, 980, 1161, 2119
BsaWI	WCCGGW	1 cut(s)	1017
BsaXI	ACNNNNNCTCC	2 cut(s)	1905, 1935
Bsc4I	CCNNNNNNNGG	4 cut(s)	585, 1372, 1527, 2180
Bse118I	RCCGGY	1 cut(s)	1017
Bse1I	ACTGG	4 cut(s)	688, 1078, 1312, 2501
Bse21I	CCTNAGG	1 cut(s)	1983
Bse3DI	GCAATG	4 cut(s)	234, 238, 1147, 1726
Bse8I	GATNNNNATC	1 cut(s)	2448
BseBI	CCWGG	5 cut(s)	220, 392, 1550, 2097, 2120
BseCI	ATCGAT	1 cut(s)	2452
BseDI	CCNNGG	5 cut(s)	391, 844, 980, 1161, 2119
BseGI	GGATG	9 cut(s)	201, 646, 693, 1056, 1956, 1993, 2158, 2272, 2476
BseJI	GATNNNNATC	1 cut(s)	2448
BseLI	CCNNNNNNNGG	4 cut(s)	585, 1372, 1527, 2180
BseMI	GCAATG	4 cut(s)	234, 238, 1147, 1726
BseMII	CTCAG	6 cut(s)	171, 513, 696, 1022, 1617, 1997
BseNI	ACTGG	4 cut(s)	688, 1078, 1312, 2501
BseRI	GAGGAG	1 cut(s)	947
BseSI	GKGCMC	1 cut(s)	2126
BseXI	GCAGC	7 cut(s)	251, 432, 1086, 1436, 1728, 1942, 2434
BseYI	CCCAGC	1 cut(s)	152
BsgI	GTGCAG	1 cut(s)	2441
BshFI	GGCC	6 cut(s)	459, 769, 821, 1419, 1623, 1836
BshTI	ACCGGT	1 cut(s)	1017
BshVI	ATCGAT	1 cut(s)	2452
BsiHKAI	GWGCWC	3 cut(s)	1402, 1800, 2335
BsiSI	CCGG	1 cut(s)	1018
BslFI	GGGAC	1 cut(s)	601
BslI	CCNNNNNNNGG	4 cut(s)	585, 1372, 1527, 2180
BsmAI	GTCTC	2 cut(s)	1588, 2285
BsmBI	CGTCTC	1 cut(s)	2285
BsmFI	GGGAC	1 cut(s)	601
BsnI	GGCC	6 cut(s)	459, 769, 821, 1419, 1623, 1836
Bso31I	GGTCTC	1 cut(s)	1588
Bsp1286I	GDGCHC	5 cut(s)	1402, 1800, 2126, 2335, 2348
Bsp1407I	TGTACA	1 cut(s)	909
Bsp143I	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp19I	CCATGG	1 cut(s)	844
BspACI	CCGC	9 cut(s)	66, 99, 108, 225, 261, 314, 333, 618, 2028
BspANI	GGCC	6 cut(s)	459, 769, 821, 1419, 1623, 1836
BspCNI	CTCAG	6 cut(s)	170, 514, 697, 1021, 1616, 1996
BspDI	ATCGAT	1 cut(s)	2452
BspLI	GGNNCC	5 cut(s)	978, 986, 1980, 2094, 2345
BspOI	GCTAGC	1 cut(s)	1095
BspPI	GGATC	4 cut(s)	382, 885, 1973, 1986
BspTI	CTTAAG	2 cut(s)	797, 2101
BspTNI	GGTCTC	1 cut(s)	1588
BsrDI	GCAATG	4 cut(s)	234, 238, 1147, 1726
BsrFI	RCCGGY	1 cut(s)	1017
BsrGI	TGTACA	1 cut(s)	909
BsrI	ACTGG	4 cut(s)	688, 1078, 1312, 2501
BssAI	RCCGGY	1 cut(s)	1017
BssECI	CCNNGG	5 cut(s)	391, 844, 980, 1161, 2119
BssMI	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
BssNI	GRCGYC	1 cut(s)	216
BssT1I	CCWWGG	3 cut(s)	844, 980, 1161
Bst2UI	CCWGG	5 cut(s)	220, 392, 1550, 2097, 2120
Bst4CI	ACNGT	9 cut(s)	538, 1002, 1462, 1471, 1489, 2128, 2143, 2297, 2398
Bst6I	CTCTTC	3 cut(s)	743, 830, 1020
BstACI	GRCGYC	1 cut(s)	216
BstAFI	CTTAAG	2 cut(s)	797, 2101
BstAPI	GCANNNNNTGC	1 cut(s)	701
BstAUI	TGTACA	1 cut(s)	909
BstC8I	GCNNGC	9 cut(s)	561, 1059, 1093, 1097, 1104, 1546, 1714, 1902, 2186
BstDEI	CTNAG	7 cut(s)	5, 157, 522, 705, 1008, 1603, 1983
BstDSI	CCRYGG	1 cut(s)	844
BstF5I	GGATG	9 cut(s)	201, 646, 693, 1056, 1956, 1993, 2158, 2272, 2476
BstHHI	GCGC	2 cut(s)	565, 796
BstKTI	GATC	8 cut(s)	390, 880, 1602, 1738, 1832, 1981, 2178, 2446
BstMAI	GTCTC	2 cut(s)	1588, 2285
BstMBI	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
BstNI	CCWGG	5 cut(s)	220, 392, 1550, 2097, 2120
BstNSI	RCATGY	5 cut(s)	699, 1516, 1967, 2188, 2228
BstSCI	CCNGG	5 cut(s)	218, 390, 1548, 2095, 2118
BstSFI	CTRYAG	2 cut(s)	426, 1488
BstSLI	GKGCMC	1 cut(s)	2126
BstV1I	GCAGC	7 cut(s)	251, 432, 1086, 1436, 1728, 1942, 2434
BstV2I	GAAGAC	1 cut(s)	227
BstX2I	RGATCY	3 cut(s)	877, 1978, 2443
BstYI	RGATCY	3 cut(s)	877, 1978, 2443
Bsu15I	ATCGAT	1 cut(s)	2452
Bsu36I	CCTNAGG	1 cut(s)	1983
BsuI	GTATCC	1 cut(s)	1477
BsuRI	GGCC	6 cut(s)	459, 769, 821, 1419, 1623, 1836
BsuTUI	ATCGAT	1 cut(s)	2452
BtgI	CCRYGG	1 cut(s)	844
BtsCI	GGATG	9 cut(s)	201, 646, 693, 1056, 1956, 1993, 2158, 2272, 2476
BtsI	GCAGTG	1 cut(s)	196
BtsIMutI	CAGTG	4 cut(s)	196, 2139, 2302, 2403
Cac8I	GCNNGC	9 cut(s)	561, 1059, 1093, 1097, 1104, 1546, 1714, 1902, 2186
CfoI	GCGC	2 cut(s)	565, 796
Cfr10I	RCCGGY	1 cut(s)	1017
Cfr13I	GGNCC	1 cut(s)	222
ClaI	ATCGAT	1 cut(s)	2452
CseI	GACGC	2 cut(s)	224, 2267
Csp6I	GTAC	8 cut(s)	622, 891, 910, 1306, 1390, 1766, 2129, 2291
CspAI	ACCGGT	1 cut(s)	1017
CviQI	GTAC	8 cut(s)	622, 891, 910, 1306, 1390, 1766, 2129, 2291
DdeI	CTNAG	7 cut(s)	5, 157, 522, 705, 1008, 1603, 1983
DpnI	GATC	8 cut(s)	389, 879, 1601, 1737, 1831, 1980, 2177, 2445
DpnII	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
DraIII	CACNNNGTG	1 cut(s)	89
DriI	GACNNNNNGTC	1 cut(s)	220
Eam1104I	CTCTTC	3 cut(s)	743, 830, 1020
Eam1105I	GACNNNNNGTC	1 cut(s)	220
EarI	CTCTTC	3 cut(s)	743, 830, 1020
Eco130I	CCWWGG	3 cut(s)	844, 980, 1161
Eco147I	AGGCCT	2 cut(s)	769, 821
Eco24I	GRGCYC	1 cut(s)	2348
Eco31I	GGTCTC	1 cut(s)	1588
Eco47I	GGWCC	1 cut(s)	222
Eco57I	CTGAAG	2 cut(s)	272, 741
Eco81I	CCTNAGG	1 cut(s)	1983
EcoRII	CCWGG	5 cut(s)	218, 390, 1548, 2095, 2118
EcoT14I	CCWWGG	3 cut(s)	844, 980, 1161
EcoT22I	ATGCAT	2 cut(s)	1620, 1793
EcoT38I	GRGCYC	1 cut(s)	2348
ErhI	CCWWGG	3 cut(s)	844, 980, 1161
Esp3I	CGTCTC	1 cut(s)	2285
FaqI	GGGAC	1 cut(s)	601
FauI	CCCGC	2 cut(s)	307, 611
FauNDI	CATATG	1 cut(s)	1087
FokI	GGATG	9 cut(s)	188, 653, 700, 1063, 1963, 2000, 2145, 2279, 2483
FriOI	GRGCYC	1 cut(s)	2348
FspBI	CTAG	8 cut(s)	573, 636, 1092, 1395, 1421, 1733, 1884, 2312
FspI	TGCGCA	1 cut(s)	564
GlaI	GCGC	2 cut(s)	564, 795
GsaI	CCCAGC	1 cut(s)	156
GsuI	CTGGAG	1 cut(s)	176
HaeIII	GGCC	6 cut(s)	459, 769, 821, 1419, 1623, 1836
HapII	CCGG	1 cut(s)	1018
HgaI	GACGC	2 cut(s)	224, 2267
HhaI	GCGC	2 cut(s)	565, 796
Hin1I	GRCGYC	1 cut(s)	216
Hin6I	GCGC	2 cut(s)	563, 794
HinP1I	GCGC	2 cut(s)	563, 794
HincII	GTYRAC	1 cut(s)	1689
HindII	GTYRAC	1 cut(s)	1689
HindIII	AAGCTT	3 cut(s)	557, 1104, 1746
HinfI	GANTC	8 cut(s)	167, 247, 1175, 1238, 1259, 1433, 1757, 2454
HpaI	GTTAAC	1 cut(s)	1689
HpaII	CCGG	1 cut(s)	1018
HphI	GGTGA	5 cut(s)	124, 766, 1254, 1331, 2501
Hpy166II	GTNNAC	5 cut(s)	912, 1083, 1308, 1689, 2293
Hpy8I	GTNNAC	5 cut(s)	912, 1083, 1308, 1689, 2293
Hpy99I	CGWCG	1 cut(s)	218
HpyAV	CCTTC	8 cut(s)	304, 449, 589, 866, 1324, 1941, 2083, 2209
HpyCH4III	ACNGT	9 cut(s)	538, 1002, 1462, 1471, 1489, 2128, 2143, 2297, 2398
HpyCH4IV	ACGT	4 cut(s)	26, 383, 624, 1388
HpyF3I	CTNAG	7 cut(s)	5, 157, 522, 705, 1008, 1603, 1983
HpySE526I	ACGT	4 cut(s)	26, 383, 624, 1388
Hsp92I	GRCGYC	1 cut(s)	216
HspAI	GCGC	2 cut(s)	563, 794
KspAI	GTTAAC	1 cut(s)	1689
Kzo9I	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
LmnI	GCTCC	6 cut(s)	195, 984, 1120, 1913, 2275, 2343
Lsp1109I	GCAGC	7 cut(s)	251, 432, 1086, 1436, 1728, 1942, 2434
LweI	GCATC	7 cut(s)	210, 319, 412, 592, 948, 1531, 1647
MaeI	CTAG	8 cut(s)	573, 636, 1092, 1395, 1421, 1733, 1884, 2312
MaeII	ACGT	4 cut(s)	26, 383, 624, 1388
MaeIII	GTNAC	5 cut(s)	379, 1013, 1156, 1384, 1456
MalI	GATC	8 cut(s)	389, 879, 1601, 1737, 1831, 1980, 2177, 2445
MboI	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
MboII	GAAGA	9 cut(s)	227, 265, 284, 730, 734, 847, 1037, 1404, 2360
MfeI	CAATTG	1 cut(s)	2233
MflI	RGATCY	3 cut(s)	877, 1978, 2443
MhlI	GDGCHC	5 cut(s)	1402, 1800, 2126, 2335, 2348
MluCI	AATT	7 cut(s)	324, 473, 775, 1498, 1669, 2201, 2233
MlyI	GAGTC	2 cut(s)	161, 1232
MmeI	TCCRAC	2 cut(s)	1028, 2087
Mph1103I	ATGCAT	2 cut(s)	1620, 1793
MslI	CAYNNNNRTG	4 cut(s)	849, 1152, 1808, 1932
MspCI	CTTAAG	2 cut(s)	797, 2101
MspI	CCGG	1 cut(s)	1018
MspR9I	CCNGG	5 cut(s)	220, 392, 1550, 2097, 2120
MunI	CAATTG	1 cut(s)	2233
MvaI	CCWGG	5 cut(s)	220, 392, 1550, 2097, 2120
NcoI	CCATGG	1 cut(s)	844
NdeI	CATATG	1 cut(s)	1087
NdeII	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
NheI	GCTAGC	1 cut(s)	1091
NlaIV	GGNNCC	5 cut(s)	978, 986, 1980, 2094, 2345
NmeAIII	GCCGAG	1 cut(s)	919
NmuCI	GTSAC	2 cut(s)	1013, 1384
NsbI	TGCGCA	1 cut(s)	564
NsiI	ATGCAT	2 cut(s)	1620, 1793
NspI	RCATGY	5 cut(s)	699, 1516, 1967, 2188, 2228
PaeI	GCATGC	1 cut(s)	2188
PceI	AGGCCT	2 cut(s)	769, 821
PciI	ACATGT	2 cut(s)	1512, 2224
PcsI	WCGNNNNNNNCGW	2 cut(s)	180, 380
PfeI	GAWTC	6 cut(s)	247, 1175, 1259, 1433, 1757, 2454
PinAI	ACCGGT	1 cut(s)	1017
PleI	GAGTC	2 cut(s)	161, 1232
PpsI	GAGTC	2 cut(s)	161, 1232
PscI	ACATGT	2 cut(s)	1512, 2224
PshBI	ATTAAT	1 cut(s)	1863
Psp1406I	AACGTT	1 cut(s)	26
Psp6I	CCWGG	5 cut(s)	218, 390, 1548, 2095, 2118
PspFI	CCCAGC	1 cut(s)	152
PspGI	CCWGG	5 cut(s)	218, 390, 1548, 2095, 2118
PspN4I	GGNNCC	5 cut(s)	978, 986, 1980, 2094, 2345
PspPI	GGNCC	1 cut(s)	222
PsuI	RGATCY	3 cut(s)	877, 1978, 2443
RsaI	GTAC	8 cut(s)	623, 892, 911, 1307, 1391, 1767, 2130, 2292
RsaNI	GTAC	8 cut(s)	622, 891, 910, 1306, 1390, 1766, 2129, 2291
RseI	CAYNNNNRTG	4 cut(s)	849, 1152, 1808, 1932
Sau3AI	GATC	8 cut(s)	387, 877, 1599, 1735, 1829, 1978, 2175, 2443
Sau96I	GGNCC	1 cut(s)	222
SchI	GAGTC	2 cut(s)	161, 1232
ScrFI	CCNGG	5 cut(s)	220, 392, 1550, 2097, 2120
SduI	GDGCHC	5 cut(s)	1402, 1800, 2126, 2335, 2348
SfaNI	GCATC	7 cut(s)	210, 319, 412, 592, 948, 1531, 1647
SfcI	CTRYAG	2 cut(s)	426, 1488
SinI	GGWCC	1 cut(s)	222
SmiMI	CAYNNNNRTG	4 cut(s)	849, 1152, 1808, 1932
SmlI	CTYRAG	3 cut(s)	797, 1631, 2101
SmoI	CTYRAG	3 cut(s)	797, 1631, 2101
SphI	GCATGC	1 cut(s)	2188
Sse9I	AATT	7 cut(s)	324, 473, 775, 1498, 1669, 2201, 2233
SseBI	AGGCCT	2 cut(s)	769, 821
SsiI	CCGC	9 cut(s)	66, 99, 108, 225, 261, 314, 333, 618, 2028
SspMI	CTAG	8 cut(s)	573, 636, 1092, 1395, 1421, 1733, 1884, 2312
StuI	AGGCCT	2 cut(s)	769, 821
StyD4I	CCNGG	5 cut(s)	218, 390, 1548, 2095, 2118
StyI	CCWWGG	3 cut(s)	844, 980, 1161
TaaI	ACNGT	9 cut(s)	538, 1002, 1462, 1471, 1489, 2128, 2143, 2297, 2398
TaiI	ACGT	4 cut(s)	29, 386, 627, 1391
TaqI	TCGA	6 cut(s)	165, 732, 745, 1371, 1938, 2452
TasI	AATT	7 cut(s)	324, 473, 775, 1498, 1669, 2201, 2233
TatI	WGTACW	2 cut(s)	909, 2128
TauI	GCSGC	4 cut(s)	101, 110, 264, 335
TfiI	GAWTC	6 cut(s)	247, 1175, 1259, 1433, 1757, 2454
TscAI	CASTG	4 cut(s)	203, 2146, 2302, 2403
TseFI	GTSAC	2 cut(s)	1013, 1384
TseI	GCWGC	7 cut(s)	264, 445, 1099, 1424, 1716, 1955, 2422
Tsp45I	GTSAC	2 cut(s)	1013, 1384
TspDTI	ATGAA	9 cut(s)	227, 363, 530, 542, 885, 1881, 2084, 2183, 2283
TspGWI	ACGGA	1 cut(s)	1394
TspRI	CASTG	4 cut(s)	203, 2146, 2302, 2403
Vha464I	CTTAAG	2 cut(s)	797, 2101
VpaK11BI	GGWCC	1 cut(s)	222
VspI	ATTAAT	1 cut(s)	1863
XbaI	TCTAGA	1 cut(s)	1732
XceI	RCATGY	5 cut(s)	699, 1516, 1967, 2188, 2228
XcmI	CCANNNNNNNNNTGG	3 cut(s)	226, 970, 1319
XspI	CTAG	8 cut(s)	573, 636, 1092, 1395, 1421, 1733, 1884, 2312
Zsp2I	ATGCAT	2 cut(s)	1620, 1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.