Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011332

Physical Location & Seq

Genomic Coordinates Reverse (-)

25609478 .. 25613047

Gene Structure 3570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g22970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGCTCAGACTGATCTCGTCTGCACATTTCGCTACCCATTATTGCAAACCCAATTCTTTCTTAACCTTTCAACGATGTGGCTACTTTACCCAATTGACCCAACACTTCACATCCCACTCACAACCTCCCAACCCAGGATTCGACTCTCACGTCTACGCAGCCACGCTCCAACATCACATCCAAAACACCGACTTCACTTCCGCAACGGCTCTTCACTCCCACATTTTGAAGAAAGGCGGATGCTTGGACCTGTTCGCTTACAACATTCTCGCCAACATGTATGTGAAAGCTGGTTCAGTCAACGATGCACTCAAGGTGTTCGACGAAATGCCCCACAGAAATGTGATTTCTTTTGTCACCTTAATCCAGGGGTTTTCGGAGTCTCAGCGTTTCGCTGAGGCTTTAGAGTTGTTTGGAAGGTTGCATAGAGAAGGCCACGAGCTGAACCCGTTTGTGTTTACCGCTGTTTTGAAGTTGCTTGTGAGGATGGGACTGGCTGAGCTGGTTTGGACTGTCCATGCTTGTGTTTATAAGCTCGGACACGGCGCCAATGCCTTTGTCGGCACTGCTCTTATTGATGCTTACTCTGTTTGCGGCGATGTTGGTATTACTAGGGATGTGTTTGATGGGATTGTTTGTAAGGATATGGTAGCTTGGTCCGGGATGATAGGGTGCTATGCTGAGAATGGCGGTTTTGGAGAGGCGGTTGAGCTCTTCTGTCAAATGAGGGTGGTTGGGTTCAGGCCTAATAATTATACTTTTAGCGGTGTGCTTAAGGCCTGTCTCGGGTTAAAGGCGCTGGATCACGGGAAGTGTGTTCATGGATGTGTGATAAAATCATGTTACGAAAAGGACCTGTATGTGGGGATTTCTTTGCTTGATTTGTACACCACATGTGGAGATGTTGATGATGCTCGGAGGGTGTTTCAAGAGGTGCCCAAAAATGAAGTGATTCCTTGGACTCTCATGGTTTCGCGGTACGCTCAGAGTAACCACTGTGAAGAGGCGCTGGACATGTTCTGTCGGATGAGGCAAGCTTTTGTTGCTCCCAATGAGTTTACGTATGCTAGTGTGCTGCAAGTTTGTGCAACCATGGAGAGTTTAGTTTTGGGGAAGCAAATCCATTGTCACGTAGTCAAGGTTGGTCTTGACTCAGTTGTGTATGTTTCAAATGCCCTCATGGATGTCTATGCTAAATGTGGACAGATAGAAAACTCGATGGACCTTTTTCTTAAATCATCAAACAGAAATGATGTATCTTGGAACACAATGATTGTTGGTTATGTCCAGTTAGGTGATGGGGAGAAGGCGTTGACTTTGTTTTCAGATATGCTTAGATGCCAAGTGCAAGCCACAGAAGTGACGTACTCCAGTGCTCTCCGTGCTTCCGCTAGCCTAGCAGCGTTGGAGCCAGGACATCAGATTCATTCAGTGACAATCAAAACCATATATGACAAGGATACTGTAGTTGGTAATTCTTTGATAGACATGTATGCCAAGTGTGGGAGCATCAAAGATGCCCGCTTGGTGTTCGATAAGTTGAAGCAACAAGATGAAGTTTCATGGAATGCAATGATCTCAGGATATTCTATGCACGGTCTTGGTAAGGAGGCTCTAAAACTTTTTGAAATGATGCAGGAAACAAATTACAAACCAAACAAGTTAACCTTTGTTGGTGTCCTATCGGCATGCAGCAATGCAGGACTGTTAGACCAAGGACATGCTTATTTTAATTGTATGGTAGGGGACTACGACATAGAACCATGCATGGAGCACTATACTTGTATGGTCTGGCTTCTGGGGAGGTCAGGCCAGCTTGATAAGGCTGTGAAGTTGATTGACGAAATCCCATTTGAACCTAGTGCTATGGTATGGCGTGCTTTGCTTGGAGCTTGTGTTATCCATAATAATGTTGAGCTTGGAAGGATTTCTGCCCAGCATGTGCTCGAAATGGATCCACAAGATGAGGCTACACATGTGTTGTTGTCAAACTTATATGCCACTGCAAAGAGGTGGGATAATGTGGCTTCTGTTAGAAAAAACATGAAAAGGAAAGGAGTAAAGAAGGAGCCGGGCCTAAGTTGGATTGAGAACCAGGGCAGAGTTCATTATTTCACCGTGGGTGATATTTCACATCCTGACATGAGACTGATCAATGGGATGCTGGAATGGTTGAAAATGAGAATCTTGAAGGCAGGTCATGTTCCCAATTGTAATGTTGTTATGCTTGATGTTGAGGATGATGAAAAGGAGCGCCTCTTGTGGGTACACAGTGAAAGATTAGCTCTAGCATTTGCGCTGGTTAGAACTCCATCTGGGAGCCTCATTCGTATCATTAAAAATCTACGGATATGTGTAGACTGCCATGCCACAGTGAAGTTAATATCAAAGGTCGTGCAGCGTGAAATTATTGTTAGAGATATGAATCGGTTCCATCACTTTCAGGATGGGATTTGCTCCTGTGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

826

Amino Acids

92.45

Weight (kDa)

6.57

Isoelectric Point (pI)

31.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	78 - 110	9.1e-06	PPR repeat
PPR_2	PF13041	215 - 261	1e-09	PPR repeat family
PPR_2	PF13041	318 - 363	1.1e-06	PPR repeat family
PPR_2	PF13041	417 - 462	2.1e-10	PPR repeat family
PPR	PF01535	419 - 448	1.7e-07	PPR repeat
PPR_2	PF13041	518 - 565	2e-11	PPR repeat family
PPR	PF01535	520 - 547	1.6e-08	PPR repeat
E_motif	PF20431	635 - 697	5.6e-23	E motif
DYW_deaminase	PF14432	733 - 825	1e-42	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13230
fragaria_vesca	FvH4_4g22970 FvH4_4g22970
malus_domestica	MD13G1127800.v1.1
prunus_persica	Prupe.1G218200_v2.0.a1
pyrus_communis	pycom13g11070 pycom16g10860 pycom16g10870
rosa_chinensis	RchiOBHm_Chr4g0429241
rosa_laevigata	RLG00000007086
rosa_multiflora	Rmu_sc0000054.1_g000027
rosa_roxburghii	Rroxscaffold_5G00370870
rosa_rugosa	Rorug04G0234000 Rorug04G0234100 Rorug04G0234200 Rorug04G0234300 Rorug04G0234400
rosa_samantha	Rh4AG290100 Rh4BG295800
rosa_wichuraiana	Rw4G025120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	531
AasI	GACNNNNNNGTC	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	2186
AccB1I	GGYRCC	2 cut(s)	545, 934
AccI	GTMKAC	2 cut(s)	153, 2358
AccII	CGCG	1 cut(s)	976
AclWI	GGATC	3 cut(s)	810, 1949, 1962
AcyI	GRCGYC	1 cut(s)	546
AfaI	GTAC	4 cut(s)	887, 980, 1367, 2268
AfiI	CCNNNNNNNGG	5 cut(s)	134, 786, 862, 1503, 2263
AflII	CTTAAG	1 cut(s)	773
AflIII	ACRYGT	5 cut(s)	276, 893, 1014, 1488, 1975
AjiI	CACGTC	1 cut(s)	151
AjnI	CCWGG	4 cut(s)	133, 366, 1411, 2094
AjuI	GAANNNNNNNTTGG	2 cut(s)	122, 154
AleI	CACNNNNGTG	1 cut(s)	1358
Alw21I	GWGCWC	4 cut(s)	714, 1378, 1776, 1947
Alw26I	GTCTC	3 cut(s)	387, 788, 2140
AlwI	GGATC	3 cut(s)	810, 1949, 1962
Ama87I	CYCGRG	1 cut(s)	785
AoxI	GGCC	5 cut(s)	433, 743, 777, 1810, 2074
ApeKI	GCWGC	5 cut(s)	158, 1075, 1400, 1692, 2398
ArsI	GACNNNNNNTTYG	2 cut(s)	1111, 1143
Asp700I	GAANNNNTTC	3 cut(s)	951, 1927, 2429
AspLEI	GCGC	5 cut(s)	548, 799, 1009, 2256, 2299
AspS9I	GGNCC	5 cut(s)	247, 657, 853, 1222, 2074
AsuC2I	CCSGG	2 cut(s)	661, 2073
AsuHPI	GGTGA	5 cut(s)	349, 1307, 2107, 2135, 2477
AsuNHI	GCTAGC	1 cut(s)	1391
AvaI	CYCGRG	1 cut(s)	785
AvaII	GGWCC	4 cut(s)	247, 657, 853, 1222
BaeGI	GKGCMC	1 cut(s)	939
BaeI	ACNNNNGTAYC	2 cut(s)	1452, 1485
BamHI	GGATCC	1 cut(s)	1954
BanI	GGYRCC	2 cut(s)	545, 934
BanII	GRGCYC	1 cut(s)	714
BauI	CACGAG	1 cut(s)	437
Bbv12I	GWGCWC	4 cut(s)	714, 1378, 1776, 1947
BbvCI	CCTCAGC	1 cut(s)	396
BbvI	GCAGC	5 cut(s)	170, 1062, 1412, 1704, 2410
BccI	CCATC	7 cut(s)	481, 620, 1213, 1292, 2320, 2441, 2442
BceAI	ACGGC	2 cut(s)	222, 559
BciT130I	CCWGG	4 cut(s)	135, 368, 1413, 2096
BciVI	GTATCC	1 cut(s)	1453
BclI	TGATCA	1 cut(s)	2151
BcnI	CCSGG	2 cut(s)	661, 2073
BcoDI	GTCTC	3 cut(s)	387, 788, 2140
BfaI	CTAG	6 cut(s)	612, 1068, 1392, 1397, 1860, 2288
BfmI	CTRYAG	1 cut(s)	1464
BfoI	RGCGCY	4 cut(s)	549, 800, 1010, 2257
BfrI	CTTAAG	1 cut(s)	773
BfuAI	ACCTGC	1 cut(s)	2186
BfuI	GTATCC	1 cut(s)	1453
BisI	GCNGC	6 cut(s)	159, 595, 1076, 1401, 1693, 2399
BlpI	GCTNAGC	1 cut(s)	498
BlsI	GCNGC	6 cut(s)	160, 596, 1077, 1402, 1694, 2400
Bme1390I	CCNGG	6 cut(s)	135, 368, 661, 1413, 2073, 2096
Bme18I	GGWCC	4 cut(s)	247, 657, 853, 1222
BmeT110I	CYCGRG	1 cut(s)	785
BmgBI	CACGTC	1 cut(s)	151
BmgT120I	GGNCC	5 cut(s)	247, 657, 853, 1222, 2074
BmiI	GGNNCC	7 cut(s)	547, 936, 1410, 1956, 2070, 2321, 2432
BmrFI	CCNGG	6 cut(s)	135, 368, 661, 1413, 2073, 2096
BmsI	GCATC	9 cut(s)	230, 295, 568, 901, 1328, 1507, 1518, 1623, 2151
BmtI	GCTAGC	1 cut(s)	1395
BpmI	CTGGAG	1 cut(s)	1354
Bpu10I	CCTNAGC	1 cut(s)	396
Bpu1102I	GCTNAGC	1 cut(s)	498
BpuEI	CTTGAG	1 cut(s)	296
BpuMI	CCSGG	2 cut(s)	661, 2073
BsaAI	YACGTR	2 cut(s)	1062, 1132
BsaBI	GATNNNNATC	1 cut(s)	2424
BsaHI	GRCGYC	1 cut(s)	546
BsaJI	CCNNGG	7 cut(s)	133, 367, 956, 1092, 1714, 2095, 2118
BsaXI	ACNNNNNCTCC	6 cut(s)	690, 720, 1295, 1325, 1881, 1911
Bsc4I	CCNNNNNNNGG	5 cut(s)	134, 786, 862, 1503, 2263
Bse1I	ACTGG	4 cut(s)	498, 1288, 1371, 2477
Bse3DI	GCAATG	2 cut(s)	1578, 1702
Bse8I	GATNNNNATC	1 cut(s)	2424
BseBI	CCWGG	4 cut(s)	135, 368, 1413, 2096
BseDI	CCNNGG	7 cut(s)	133, 367, 956, 1092, 1714, 2095, 2118
BseJI	GATNNNNATC	1 cut(s)	2424
BseLI	CCNNNNNNNGG	5 cut(s)	134, 786, 862, 1503, 2263
BseMI	GCAATG	2 cut(s)	1578, 1702
BseMII	CTCAG	8 cut(s)	19, 387, 398, 489, 672, 998, 1167, 1593
BseNI	ACTGG	4 cut(s)	498, 1288, 1371, 2477
BseSI	GKGCMC	1 cut(s)	939
BseXI	GCAGC	5 cut(s)	170, 1062, 1412, 1704, 2410
BseYI	CCCAGC	1 cut(s)	1935
BsgI	GTGCAG	2 cut(s)	6, 2417
Bsh1236I	CGCG	1 cut(s)	976
BshFI	GGCC	5 cut(s)	435, 745, 779, 1812, 2076
BshNI	GGYRCC	2 cut(s)	545, 934
BsiHKAI	GWGCWC	4 cut(s)	714, 1378, 1776, 1947
BsiHKCI	CYCGRG	1 cut(s)	785
BsiSI	CCGG	2 cut(s)	660, 2072
BslFI	GGGAC	2 cut(s)	504, 1760
BslI	CCNNNNNNNGG	5 cut(s)	134, 786, 862, 1503, 2263
BsmAI	GTCTC	3 cut(s)	387, 788, 2140
BsmFI	GGGAC	2 cut(s)	504, 1760
BsmI	GAATGC	1 cut(s)	1573
BsnI	GGCC	5 cut(s)	435, 745, 779, 1812, 2076
BsoBI	CYCGRG	1 cut(s)	785
Bsp1286I	GDGCHC	5 cut(s)	714, 939, 1378, 1776, 1947
Bsp1407I	TGTACA	1 cut(s)	885
Bsp143I	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
Bsp1720I	GCTNAGC	1 cut(s)	498
Bsp19I	CCATGG	1 cut(s)	1092
BspANI	GGCC	5 cut(s)	435, 745, 779, 1812, 2076
BspCNI	CTCAG	8 cut(s)	18, 388, 397, 490, 673, 997, 1166, 1592
BspFNI	CGCG	1 cut(s)	976
BspLI	GGNNCC	7 cut(s)	547, 936, 1410, 1956, 2070, 2321, 2432
BspMI	ACCTGC	1 cut(s)	2186
BspOI	GCTAGC	1 cut(s)	1395
BspPI	GGATC	3 cut(s)	810, 1949, 1962
BspQI	GCTCTTC	2 cut(s)	216, 719
BspT107I	GGYRCC	2 cut(s)	545, 934
BspTI	CTTAAG	1 cut(s)	773
BsrDI	GCAATG	2 cut(s)	1578, 1702
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	4 cut(s)	498, 1288, 1371, 2477
BssECI	CCNNGG	7 cut(s)	133, 367, 956, 1092, 1714, 2095, 2118
BssMI	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
BssNI	GRCGYC	1 cut(s)	546
BssSI	CACGAG	1 cut(s)	437
BssT1I	CCWWGG	3 cut(s)	956, 1092, 1714
Bst2BI	CACGAG	1 cut(s)	437
Bst2UI	CCWGG	4 cut(s)	135, 368, 1413, 2096
Bst4CI	ACNGT	8 cut(s)	514, 998, 1465, 1598, 1707, 2119, 2273, 2374
Bst6I	CTCTTC	3 cut(s)	216, 719, 996
BstACI	GRCGYC	1 cut(s)	546
BstAFI	CTTAAG	1 cut(s)	773
BstAUI	TGTACA	1 cut(s)	885
BstBAI	YACGTR	2 cut(s)	1062, 1132
BstC8I	GCNNGC	7 cut(s)	1035, 1350, 1393, 1522, 1690, 1814, 1878
BstDSI	CCRYGG	2 cut(s)	1092, 2118
BstFNI	CGCG	1 cut(s)	976
BstH2I	RGCGCY	4 cut(s)	549, 800, 1010, 2257
BstHHI	GCGC	5 cut(s)	548, 799, 1009, 2256, 2299
BstKTI	GATC	5 cut(s)	15, 805, 1578, 1957, 2154
BstMAI	GTCTC	3 cut(s)	387, 788, 2140
BstMBI	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 1043, 1382, 1397, 1882
BstNI	CCWGG	4 cut(s)	135, 368, 1413, 2096
BstNSI	RCATGY	8 cut(s)	280, 897, 1018, 1492, 1692, 1724, 1943, 1979
BstSCI	CCNGG	6 cut(s)	133, 366, 659, 1411, 2071, 2094
BstSFI	CTRYAG	1 cut(s)	1464
BstSLI	GKGCMC	1 cut(s)	939
BstSNI	TACGTA	1 cut(s)	1062
BstUI	CGCG	1 cut(s)	976
BstV1I	GCAGC	5 cut(s)	170, 1062, 1412, 1704, 2410
BstX2I	RGATCY	1 cut(s)	1954
BstYI	RGATCY	1 cut(s)	1954
BsuI	GTATCC	1 cut(s)	1453
BsuRI	GGCC	5 cut(s)	435, 745, 779, 1812, 2076
BtgI	CCRYGG	2 cut(s)	1092, 2118
BtgZI	GCGATG	1 cut(s)	612
BtrI	CACGTC	1 cut(s)	151
BtsI	GCAGTG	2 cut(s)	564, 2001
BtsIMutI	CAGTG	7 cut(s)	564, 994, 1378, 1437, 2001, 2278, 2379
BveI	ACCTGC	1 cut(s)	2186
Cac8I	GCNNGC	7 cut(s)	1035, 1350, 1393, 1522, 1690, 1814, 1878
CfoI	GCGC	5 cut(s)	548, 799, 1009, 2256, 2299
Cfr13I	GGNCC	5 cut(s)	247, 657, 853, 1222, 2074
Csp6I	GTAC	4 cut(s)	886, 979, 1366, 2267
CviQI	GTAC	4 cut(s)	886, 979, 1366, 2267
DinI	GGCGCC	1 cut(s)	547
DpnI	GATC	5 cut(s)	14, 804, 1577, 1956, 2153
DpnII	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
Eam1104I	CTCTTC	3 cut(s)	216, 719, 996
EarI	CTCTTC	3 cut(s)	216, 719, 996
EciI	GGCGGA	1 cut(s)	252
Ecl136II	GAGCTC	1 cut(s)	712
Eco105I	TACGTA	1 cut(s)	1062
Eco130I	CCWWGG	3 cut(s)	956, 1092, 1714
Eco147I	AGGCCT	2 cut(s)	745, 779
Eco24I	GRGCYC	1 cut(s)	714
Eco47I	GGWCC	4 cut(s)	247, 657, 853, 1222
Eco53kI	GAGCTC	1 cut(s)	712
Eco88I	CYCGRG	1 cut(s)	785
EcoICRI	GAGCTC	1 cut(s)	712
EcoO109I	RGGNCCY	1 cut(s)	853
EcoRII	CCWGG	4 cut(s)	133, 366, 1411, 2094
EcoT14I	CCWWGG	3 cut(s)	956, 1092, 1714
EcoT22I	ATGCAT	1 cut(s)	1769
EcoT38I	GRGCYC	1 cut(s)	714
EgeI	GGCGCC	1 cut(s)	547
EheI	GGCGCC	1 cut(s)	547
ErhI	CCWWGG	3 cut(s)	956, 1092, 1714
FalI	AAGNNNNNCTT	2 cut(s)	1652, 1684
FaqI	GGGAC	2 cut(s)	504, 1760
FauI	CCCGC	1 cut(s)	1529
FbaI	TGATCA	1 cut(s)	2151
FblI	GTMKAC	2 cut(s)	153, 2358
Fnu4HI	GCNGC	6 cut(s)	159, 595, 1076, 1401, 1693, 2399
FriOI	GRGCYC	1 cut(s)	714
Fsp4HI	GCNGC	6 cut(s)	159, 595, 1076, 1401, 1693, 2399
FspBI	CTAG	6 cut(s)	612, 1068, 1392, 1397, 1860, 2288
GlaI	GCGC	5 cut(s)	547, 798, 1008, 2255, 2298
GluI	GCNGC	6 cut(s)	159, 595, 1076, 1401, 1693, 2399
GsaI	CCCAGC	1 cut(s)	1939
GsuI	CTGGAG	1 cut(s)	1354
HaeII	RGCGCY	4 cut(s)	549, 800, 1010, 2257
HaeIII	GGCC	5 cut(s)	435, 745, 779, 1812, 2076
HapII	CCGG	2 cut(s)	660, 2072
HhaI	GCGC	5 cut(s)	548, 799, 1009, 2256, 2299
Hin1I	GRCGYC	1 cut(s)	546
Hin6I	GCGC	5 cut(s)	546, 797, 1007, 2254, 2297
HinP1I	GCGC	5 cut(s)	546, 797, 1007, 2254, 2297
HincII	GTYRAC	3 cut(s)	301, 1314, 1665
HindII	GTYRAC	3 cut(s)	301, 1314, 1665
HindIII	AAGCTT	1 cut(s)	1035
HinfI	GANTC	9 cut(s)	138, 143, 380, 952, 961, 1151, 1423, 2184, 2425
HpaI	GTTAAC	1 cut(s)	1665
HpaII	CCGG	2 cut(s)	660, 2072
HphI	GGTGA	5 cut(s)	349, 1307, 2107, 2135, 2477
Hpy188I	TCNGA	8 cut(s)	8, 379, 539, 918, 987, 1026, 1327, 1422
Hpy188III	TCNNGA	6 cut(s)	929, 1148, 1581, 2138, 2188, 2444
Hpy99I	CGWCG	1 cut(s)	326
HpyAV	CCTTC	6 cut(s)	411, 425, 1300, 1917, 2059, 2185
HpyCH4III	ACNGT	8 cut(s)	514, 998, 1465, 1598, 1707, 2119, 2273, 2374
HpyCH4IV	ACGT	4 cut(s)	150, 1061, 1131, 1364
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 1043, 1382, 1397, 1882
HpySE526I	ACGT	4 cut(s)	150, 1061, 1131, 1364
Hsp92I	GRCGYC	1 cut(s)	546
HspAI	GCGC	5 cut(s)	546, 797, 1007, 2254, 2297
KasI	GGCGCC	1 cut(s)	545
Ksp22I	TGATCA	1 cut(s)	2151
KspAI	GTTAAC	1 cut(s)	1665
Kzo9I	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
LguI	GCTCTTC	2 cut(s)	216, 719
Lsp1109I	GCAGC	5 cut(s)	170, 1062, 1412, 1704, 2410
LweI	GCATC	9 cut(s)	230, 295, 568, 901, 1328, 1507, 1518, 1623, 2151
MaeI	CTAG	6 cut(s)	612, 1068, 1392, 1397, 1860, 2288
MaeII	ACGT	4 cut(s)	150, 1061, 1131, 1364
MaeIII	GTNAC	6 cut(s)	355, 842, 989, 1127, 1360, 1432
MalI	GATC	5 cut(s)	14, 804, 1577, 1956, 2153
MboI	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
MboII	GAAGA	4 cut(s)	203, 241, 706, 1013
MfeI	CAATTG	2 cut(s)	92, 2209
MflI	RGATCY	1 cut(s)	1954
MhlI	GDGCHC	5 cut(s)	714, 939, 1378, 1776, 1947
MluCI	AATT	8 cut(s)	52, 92, 751, 1474, 1645, 1732, 2209, 2406
Mly113I	GGCGCC	1 cut(s)	546
MlyI	GAGTC	4 cut(s)	137, 389, 955, 1145
MmeI	TCCRAC	4 cut(s)	193, 1004, 1386, 2063
Mph1103I	ATGCAT	1 cut(s)	1769
MroXI	GAANNNNTTC	3 cut(s)	951, 1927, 2429
MseI	TTAA	9 cut(s)	62, 362, 774, 791, 1233, 1664, 1731, 2337, 2381
MslI	CAYNNNNRTG	6 cut(s)	281, 339, 522, 825, 1358, 1908
MspA1I	CMGCKG	1 cut(s)	464
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	2 cut(s)	660, 2072
MspR9I	CCNGG	6 cut(s)	135, 368, 661, 1413, 2073, 2096
MunI	CAATTG	2 cut(s)	92, 2209
Mva1269I	GAATGC	1 cut(s)	1573
MvaI	CCWGG	4 cut(s)	135, 368, 1413, 2096
MvnI	CGCG	1 cut(s)	976
MwoI	GCNNNNNNNGC	5 cut(s)	29, 1043, 1382, 1397, 1882
NarI	GGCGCC	1 cut(s)	546
NciI	CCSGG	2 cut(s)	661, 2073
NcoI	CCATGG	1 cut(s)	1092
NdeII	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
NheI	GCTAGC	1 cut(s)	1391
NlaIV	GGNNCC	7 cut(s)	547, 936, 1410, 1956, 2070, 2321, 2432
NmuCI	GTSAC	4 cut(s)	355, 1127, 1360, 1432
NsiI	ATGCAT	1 cut(s)	1769
NspI	RCATGY	8 cut(s)	280, 897, 1018, 1492, 1692, 1724, 1943, 1979
OliI	CACNNNNGTG	1 cut(s)	1358
PaeI	GCATGC	1 cut(s)	1692
PceI	AGGCCT	2 cut(s)	745, 779
PciI	ACATGT	5 cut(s)	276, 893, 1014, 1488, 1975
PciSI	GCTCTTC	2 cut(s)	216, 719
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PctI	GAATGC	1 cut(s)	1573
PdmI	GAANNNNTTC	3 cut(s)	951, 1927, 2429
PfeI	GAWTC	5 cut(s)	138, 952, 1423, 2184, 2425
PfoI	TCCNGGA	1 cut(s)	659
PkrI	GCNGC	6 cut(s)	160, 596, 1077, 1402, 1694, 2400
PleI	GAGTC	4 cut(s)	137, 388, 955, 1145
PluTI	GGCGCC	1 cut(s)	549
PpsI	GAGTC	4 cut(s)	137, 388, 955, 1145
Ppu21I	YACGTR	2 cut(s)	1062, 1132
PpuMI	RGGWCCY	1 cut(s)	853
PscI	ACATGT	5 cut(s)	276, 893, 1014, 1488, 1975
PsiI	TTATAA	1 cut(s)	531
Psp124BI	GAGCTC	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	853
Psp6I	CCWGG	4 cut(s)	133, 366, 1411, 2094
PspFI	CCCAGC	1 cut(s)	1935
PspGI	CCWGG	4 cut(s)	133, 366, 1411, 2094
PspN4I	GGNNCC	7 cut(s)	547, 936, 1410, 1956, 2070, 2321, 2432
PspPI	GGNCC	5 cut(s)	247, 657, 853, 1222, 2074
PspPPI	RGGWCCY	1 cut(s)	853
PsuI	RGATCY	1 cut(s)	1954
RsaI	GTAC	4 cut(s)	887, 980, 1367, 2268
RsaNI	GTAC	4 cut(s)	886, 979, 1366, 2267
RseI	CAYNNNNRTG	6 cut(s)	281, 339, 522, 825, 1358, 1908
SacI	GAGCTC	1 cut(s)	714
SapI	GCTCTTC	2 cut(s)	216, 719
SaqAI	TTAA	9 cut(s)	62, 362, 774, 791, 1233, 1664, 1731, 2337, 2381
SatI	GCNGC	6 cut(s)	159, 595, 1076, 1401, 1693, 2399
Sau3AI	GATC	5 cut(s)	12, 802, 1575, 1954, 2151
Sau96I	GGNCC	5 cut(s)	247, 657, 853, 1222, 2074
SchI	GAGTC	4 cut(s)	137, 389, 955, 1145
ScrFI	CCNGG	6 cut(s)	135, 368, 661, 1413, 2073, 2096
SduI	GDGCHC	5 cut(s)	714, 939, 1378, 1776, 1947
SfaNI	GCATC	9 cut(s)	230, 295, 568, 901, 1328, 1507, 1518, 1623, 2151
SfcI	CTRYAG	1 cut(s)	1464
SfoI	GGCGCC	1 cut(s)	547
SinI	GGWCC	4 cut(s)	247, 657, 853, 1222
SmiMI	CAYNNNNRTG	6 cut(s)	281, 339, 522, 825, 1358, 1908
SmlI	CTYRAG	2 cut(s)	311, 773
SmoI	CTYRAG	2 cut(s)	311, 773
SnaBI	TACGTA	1 cut(s)	1062
SphI	GCATGC	1 cut(s)	1692
Sse9I	AATT	8 cut(s)	52, 92, 751, 1474, 1645, 1732, 2209, 2406
SseBI	AGGCCT	2 cut(s)	745, 779
SspDI	GGCGCC	1 cut(s)	545
SspMI	CTAG	6 cut(s)	612, 1068, 1392, 1397, 1860, 2288
SstI	GAGCTC	1 cut(s)	714
StuI	AGGCCT	2 cut(s)	745, 779
StyD4I	CCNGG	6 cut(s)	133, 366, 659, 1411, 2071, 2094
StyI	CCWWGG	3 cut(s)	956, 1092, 1714
TaaI	ACNGT	8 cut(s)	514, 998, 1465, 1598, 1707, 2119, 2273, 2374
TaiI	ACGT	4 cut(s)	153, 1064, 1134, 1367
TaqI	TCGA	5 cut(s)	141, 321, 1217, 1533, 1947
TasI	AATT	8 cut(s)	52, 92, 751, 1474, 1645, 1732, 2209, 2406
TatI	WGTACW	1 cut(s)	885
TauI	GCSGC	1 cut(s)	597
TfiI	GAWTC	5 cut(s)	138, 952, 1423, 2184, 2425
Tru1I	TTAA	9 cut(s)	62, 362, 774, 791, 1233, 1664, 1731, 2337, 2381
Tru9I	TTAA	9 cut(s)	62, 362, 774, 791, 1233, 1664, 1731, 2337, 2381
TscAI	CASTG	7 cut(s)	571, 1001, 1378, 1437, 2008, 2278, 2379
TseFI	GTSAC	4 cut(s)	355, 1127, 1360, 1432
TseI	GCWGC	5 cut(s)	158, 1075, 1400, 1692, 2398
Tsp45I	GTSAC	4 cut(s)	355, 1127, 1360, 1432
TspDTI	ATGAA	9 cut(s)	809, 960, 1415, 1551, 1569, 2060, 2096, 2259, 2438
TspGWI	ACGGA	2 cut(s)	1370, 2362
TspRI	CASTG	7 cut(s)	571, 1001, 1378, 1437, 2008, 2278, 2379
Vha464I	CTTAAG	1 cut(s)	773
VpaK11BI	GGWCC	4 cut(s)	247, 657, 853, 1222
XceI	RCATGY	8 cut(s)	280, 897, 1018, 1492, 1692, 1724, 1943, 1979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1295
XmiI	GTMKAC	2 cut(s)	153, 2358
XmnI	GAANNNNTTC	3 cut(s)	951, 1927, 2429
XspI	CTAG	6 cut(s)	612, 1068, 1392, 1397, 1860, 2288
Zsp2I	ATGCAT	1 cut(s)	1769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.