AT5G15470

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
5020941 .. 5024750
3810 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G15470.1

Sequence Viewer

Length: 1599 bp
ATGCAGCTTCACATATCGCCGAGTATGAGAAGCATTACGATTTCGAGCAGCAATGAGTTTATTGACTTGATGAAGATCAAGGTCGCAGCTCGTCACATCTCTTACCGAACTCTCTTCCACACCATCTTAATCCTCGCTTTCTTGTTGCCTTTTGTTTTCATTCTCACCGCTGTTGTTACCCTTGAGGGTGTCAACAAATGCTCCTCCATTGATTGTTTAGGGAGGCGGATAGGTCCACGTCTTCTTGGTAGGGTAGATGATTCAGAGAGACTAGCTAGAGACTTTTATAAAATTCTAAACGAAGTAAGCACTCAAGAAATTCCAGATGGTTTGAAGCTTCCAAATTCTTTTAGTCAACTTGTTTCCGATATGAAGAATAACCACTATGATGCAAAAACATTTGCTCTTGTGCTGCGAGCCATGATGGAGAAGTTTGAACGTGATATGAGGGAATCGAAATTTGCAGAACTTATGAACAAGCACTTTGCAGCAAGTTCCATTCCCAAAGGCATTCATTGTCTCTCTCTAAGACTGACAGATGAATATTCCTCCAATGCTCATGCTCGAAGACAGCTTCCTTCACCAGAGTTTCTCCCTGTTCTTTCAGATAATGCTTACCACCACTTTATTTTGTCCACGGACAATATTTTGGCTGCCTCAGTTGTGGTCTCATCCGCTGTTCAGTCATCTTCAAAACCCGAGAAAATTGTCTTTCACATCATTACAGACAAGAAAACCTATGCGGGTATGCATTCATGGTTTGCGCTTAATTCTGTTGCACCAGCAATTGTTGAGGTTAAAGGTGTTCATCAGTTTGACTGGTTGACGAGAGAGAATGTTCCGGTTTTGGAAGCTGTGGAAAGCCATAATGGTGTCAGGGACTATTATCATGGGAATCATGTCGCTGGGGCAAACCTCACCGAAACAACTCCTCGAACATTTGCTTCAAAATTGCAGTCTAGAAGTCCAAAATACATATCTTTGCTCAACCATCTTAGAATATATATACCAGAGCTTTTCCCGAACTTGGACAAGGTGGTTTTCTTAGACGATGATATAGTTGTCCAGGGAGACTTAACTCCACTTTGGGATGTTGACCTCGGTGGTAAGGTCAATGGGGCAGTAGAGACTTGCAGGGGTGAAGATGAATGGGTGATGTCAAAGCGTTTAAGGAACTACTTCAATTTCTCTCACCCGCTCATCGCAAAGCATTTAGATCCTGAAGAATGTGCTTGGGCATATGGTATGAATATCTTCGATCTACAAGCTTGGAGGAAAACAAATATCAGAGAAACGTATCACTCTTGGCTTAGAGAGAATCTAAAGTCAAATCTGACAATGTGGAAACTTGGAACCTTGCCTCCTGCTCTTATCGCGTTCAAGGGTCACGTACACATAATAGACTCGTCATGGCATATGCTAGGATTAGGCTACCAGAGCAAGACCAACATAGAAAATGTGAAGAAAGCAGCAGTGATCCACTACAATGGGCAGTCAAAGCCATGGCTGGAGATTGGTTTCGAGCATCTGCGGCCATTCTGGACCAAATACGTCAACTACTCAAATGATTTCATCAAGAACTGTCACATATTGGAGTAG

Protein Analysis

532

Amino Acids

60.82

Weight (kDa)

8.35

Isoelectric Point (pI)

51.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 173 - 505 7.8e-80 Glycosyl transferase family 8
Glyco_transf_24 PF18404 334 - 429 8.9e-06 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 288
AccBSI CCGCTC 1 cut(s) 1198
AccII CGCG 1 cut(s) 1376
AciI CCGC 6 cut(s) 168, 226, 675, 743, 1196, 1531
AclWI GGATC 2 cut(s) 1211, 1471
AcoI YGGCCR 1 cut(s) 1532
AcsI RAATTY 4 cut(s) 291, 318, 343, 458
AcuI CTGAAG 1 cut(s) 1242
AfaI GTAC 1 cut(s) 1392
AfiI CCNNNNNNNGG 1 cut(s) 1027
AgsI TTSAA 6 cut(s) 334, 437, 693, 948, 1183, 1381
AjiI CACGTC 1 cut(s) 239
AjnI CCWGG 1 cut(s) 1065
AloI GAACNNNNNNTCC 2 cut(s) 1345, 1377
AluBI AGCT 8 cut(s) 7, 89, 275, 337, 574, 854, 1015, 1268
AluI AGCT 8 cut(s) 7, 89, 275, 337, 574, 854, 1015, 1268
Alw26I GTCTC 6 cut(s) 262, 273, 524, 673, 1065, 1121
AlwI GGATC 2 cut(s) 1211, 1471
Ama87I CYCGRG 1 cut(s) 698
AoxI GGCC 1 cut(s) 1532
ApeKI GCWGC 7 cut(s) 4, 48, 86, 412, 488, 653, 1469
ApoI RAATTY 4 cut(s) 291, 318, 343, 458
ArsI GACNNNNNNTTYG 2 cut(s) 941, 973
Asp700I GAANNNNTTC 2 cut(s) 1178, 1253
AspLEI GCGC 1 cut(s) 766
AspS9I GGNCC 2 cut(s) 233, 1542
AsuHPI GGTGA 6 cut(s) 157, 573, 910, 1151, 1165, 1184
AvaI CYCGRG 1 cut(s) 698
AvaII GGWCC 2 cut(s) 233, 1542
BbsI GAAGAC 2 cut(s) 233, 574
BbvI GCAGC 7 cut(s) 16, 60, 98, 399, 500, 640, 1481
BccI CCATC 4 cut(s) 131, 320, 418, 999
BciT130I CCWGG 1 cut(s) 1067
BcoDI GTCTC 6 cut(s) 262, 273, 524, 673, 1065, 1121
BfaI CTAG 4 cut(s) 272, 276, 960, 1421
BisI GCNGC 8 cut(s) 5, 49, 87, 413, 489, 654, 1470, 1532
BlsI GCNGC 8 cut(s) 6, 50, 88, 414, 490, 655, 1471, 1533
Bme1390I CCNGG 1 cut(s) 1067
Bme18I GGWCC 2 cut(s) 233, 1542
BmeT110I CYCGRG 1 cut(s) 698
BmgBI CACGTC 1 cut(s) 239
BmgT120I GGNCC 2 cut(s) 233, 1542
BmiI GGNNCC 1 cut(s) 1354
BmrFI CCNGG 1 cut(s) 1067
BmsI GCATC 2 cut(s) 379, 1534
BpiI GAAGAC 2 cut(s) 233, 574
BpmI CTGGAG 1 cut(s) 1529
BpuEI CTTGAG 2 cut(s) 203, 297
BsaAI YACGTR 1 cut(s) 1390
BsaBI GATNNNNATC 1 cut(s) 74
BsaI GGTCTC 1 cut(s) 673
BsaJI CCNNGG 4 cut(s) 636, 1066, 1099, 1502
BsaWI WCCGGW 1 cut(s) 841
BsaXI ACNNNNNCTCC 4 cut(s) 185, 215, 1345, 1375
Bsc4I CCNNNNNNNGG 1 cut(s) 1027
Bse1I ACTGG 1 cut(s) 824
Bse3DI GCAATG 1 cut(s) 58
Bse8I GATNNNNATC 1 cut(s) 74
BseBI CCWGG 1 cut(s) 1067
BseDI CCNNGG 4 cut(s) 636, 1066, 1099, 1502
BseGI GGATG 2 cut(s) 671, 1096
BseJI GATNNNNATC 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 1027
BseMI GCAATG 1 cut(s) 58
BseMII CTCAG 1 cut(s) 672
BseNI ACTGG 1 cut(s) 824
BseRI GAGGAG 2 cut(s) 193, 921
BseXI GCAGC 7 cut(s) 16, 60, 98, 399, 500, 640, 1481
BseYI CCCAGC 1 cut(s) 905
Bsh1236I CGCG 1 cut(s) 1376
BshFI GGCC 1 cut(s) 1534
BsiHKCI CYCGRG 1 cut(s) 698
BsiSI CCGG 1 cut(s) 842
BslFI GGGAC 1 cut(s) 893
BslI CCNNNNNNNGG 1 cut(s) 1027
BsmAI GTCTC 6 cut(s) 262, 273, 524, 673, 1065, 1121
BsmFI GGGAC 1 cut(s) 893
BsmI GAATGC 2 cut(s) 510, 751
BsnI GGCC 1 cut(s) 1534
Bso31I GGTCTC 1 cut(s) 673
BsoBI CYCGRG 1 cut(s) 698
Bsp143I GATC 4 cut(s) 75, 1216, 1258, 1476
Bsp19I CCATGG 1 cut(s) 1502
BspACI CCGC 6 cut(s) 168, 226, 675, 743, 1196, 1531
BspANI GGCC 1 cut(s) 1534
BspCNI CTCAG 1 cut(s) 671
BspFNI CGCG 1 cut(s) 1376
BspLI GGNNCC 1 cut(s) 1354
BspPI GGATC 2 cut(s) 1211, 1471
BspTNI GGTCTC 1 cut(s) 673
BsrBI CCGCTC 1 cut(s) 1198
BsrDI GCAATG 1 cut(s) 58
BsrI ACTGG 1 cut(s) 824
BssECI CCNNGG 4 cut(s) 636, 1066, 1099, 1502
BssMI GATC 4 cut(s) 75, 1216, 1258, 1476
BssT1I CCWWGG 1 cut(s) 1502
Bst2UI CCWGG 1 cut(s) 1067
Bst4CI ACNGT 1 cut(s) 1583
Bst6I CTCTTC 1 cut(s) 119
BstBAI YACGTR 1 cut(s) 1390
BstC8I GCNNGC 1 cut(s) 417
BstDEI CTNAG 5 cut(s) 527, 658, 995, 1045, 1310
BstDSI CCRYGG 2 cut(s) 636, 1502
BstF5I GGATG 2 cut(s) 671, 1096
BstFNI CGCG 1 cut(s) 1376
BstHHI GCGC 1 cut(s) 766
BstKTI GATC 4 cut(s) 78, 1219, 1261, 1479
BstMAI GTCTC 6 cut(s) 262, 273, 524, 673, 1065, 1121
BstMBI GATC 4 cut(s) 75, 1216, 1258, 1476
BstMWI GCNNNNNNNGC 4 cut(s) 1373, 1437, 1498, 1531
BstNI CCWGG 1 cut(s) 1067
BstSCI CCNGG 1 cut(s) 1065
BstUI CGCG 1 cut(s) 1376
BstV1I GCAGC 7 cut(s) 16, 60, 98, 399, 500, 640, 1481
BstV2I GAAGAC 2 cut(s) 233, 574
BstX2I RGATCY 1 cut(s) 1216
BstXI CCANNNNNNTGG 1 cut(s) 1487
BstYI RGATCY 1 cut(s) 1216
BsuRI GGCC 1 cut(s) 1534
BtgI CCRYGG 2 cut(s) 636, 1502
BtgZI GCGATG 1 cut(s) 1186
BtrI CACGTC 1 cut(s) 239
BtsCI GGATG 2 cut(s) 671, 1096
BtsI GCAGTG 1 cut(s) 1479
BtsIMutI CAGTG 1 cut(s) 1479
Cac8I GCNNGC 1 cut(s) 417
CfoI GCGC 1 cut(s) 766
Cfr13I GGNCC 2 cut(s) 233, 1542
Csp6I GTAC 1 cut(s) 1391
CviAII CATG 7 cut(s) 421, 560, 756, 890, 899, 1410, 1503
CviQI GTAC 1 cut(s) 1391
DdeI CTNAG 5 cut(s) 527, 658, 995, 1045, 1310
DpnI GATC 4 cut(s) 77, 1218, 1260, 1478
DpnII GATC 4 cut(s) 75, 1216, 1258, 1476
EaeI YGGCCR 1 cut(s) 1532
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
EciI GGCGGA 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 1502
Eco31I GGTCTC 1 cut(s) 673
Eco47I GGWCC 2 cut(s) 233, 1542
Eco57I CTGAAG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 698
EcoRII CCWGG 1 cut(s) 1065
EcoT14I CCWWGG 1 cut(s) 1502
EcoT22I ATGCAT 1 cut(s) 753
ErhI CCWWGG 1 cut(s) 1502
FaeI CATG 7 cut(s) 424, 563, 759, 893, 902, 1413, 1506
FaqI GGGAC 1 cut(s) 893
FatI CATG 7 cut(s) 420, 559, 755, 889, 898, 1409, 1502
FauI CCCGC 2 cut(s) 736, 1203
FauNDI CATATG 2 cut(s) 1240, 1416
Fnu4HI GCNGC 8 cut(s) 5, 49, 87, 413, 489, 654, 1470, 1532
FokI GGATG 2 cut(s) 658, 1103
Fsp4HI GCNGC 8 cut(s) 5, 49, 87, 413, 489, 654, 1470, 1532
FspBI CTAG 4 cut(s) 272, 276, 960, 1421
GlaI GCGC 1 cut(s) 765
GluI GCNGC 8 cut(s) 5, 49, 87, 413, 489, 654, 1470, 1532
GsaI CCCAGC 1 cut(s) 909
GsuI CTGGAG 1 cut(s) 1529
HaeIII GGCC 1 cut(s) 1534
HapII CCGG 1 cut(s) 842
HhaI GCGC 1 cut(s) 766
Hin1II CATG 7 cut(s) 424, 563, 759, 893, 902, 1413, 1506
Hin6I GCGC 1 cut(s) 764
HinP1I GCGC 1 cut(s) 764
HincII GTYRAC 5 cut(s) 193, 356, 825, 1096, 1555
HindII GTYRAC 5 cut(s) 193, 356, 825, 1096, 1555
HindIII AAGCTT 2 cut(s) 335, 1266
HinfI GANTC 5 cut(s) 260, 452, 895, 1318, 1403
HpaII CCGG 1 cut(s) 842
HphI GGTGA 6 cut(s) 157, 573, 910, 1151, 1165, 1184
Hpy166II GTNNAC 8 cut(s) 193, 236, 356, 636, 825, 1096, 1393, 1555
Hpy188I TCNGA 5 cut(s) 265, 367, 607, 1289, 1335
Hpy188III TCNNGA 7 cut(s) 314, 323, 960, 1021, 1220, 1540, 1576
Hpy8I GTNNAC 8 cut(s) 193, 236, 356, 636, 825, 1096, 1393, 1555
HpyAV CCTTC 1 cut(s) 588
HpyCH4III ACNGT 1 cut(s) 1583
HpyCH4IV ACGT 5 cut(s) 238, 439, 1295, 1389, 1551
HpyCH4V TGCA 8 cut(s) 4, 392, 464, 488, 751, 779, 955, 1134
HpyF10VI GCNNNNNNNGC 4 cut(s) 1373, 1437, 1498, 1531
HpyF3I CTNAG 5 cut(s) 527, 658, 995, 1045, 1310
HpySE526I ACGT 5 cut(s) 238, 439, 1295, 1389, 1551
Hsp92II CATG 7 cut(s) 424, 563, 759, 893, 902, 1413, 1506
HspAI GCGC 1 cut(s) 764
Kzo9I GATC 4 cut(s) 75, 1216, 1258, 1476
LmnI GCTCC 1 cut(s) 206
Lsp1109I GCAGC 7 cut(s) 16, 60, 98, 399, 500, 640, 1481
LweI GCATC 2 cut(s) 379, 1534
MaeI CTAG 4 cut(s) 272, 276, 960, 1421
MaeII ACGT 5 cut(s) 238, 439, 1295, 1389, 1551
MaeIII GTNAC 4 cut(s) 92, 175, 1385, 1583
MalI GATC 4 cut(s) 77, 1218, 1260, 1478
MbiI CCGCTC 1 cut(s) 1198
MboI GATC 4 cut(s) 75, 1216, 1258, 1476
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 1 cut(s) 1216
MluCI AATT 9 cut(s) 291, 318, 343, 458, 705, 769, 786, 950, 1183
MlyI GAGTC 1 cut(s) 1397
Mph1103I ATGCAT 1 cut(s) 753
MroXI GAANNNNTTC 2 cut(s) 1178, 1253
MseI TTAA 5 cut(s) 128, 768, 798, 1076, 1169
MslI CAYNNNNRTG 3 cut(s) 387, 870, 1485
MspA1I CMGCKG 2 cut(s) 170, 677
MspI CCGG 1 cut(s) 842
MspR9I CCNGG 1 cut(s) 1067
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 2 cut(s) 510, 751
MvaI CCWGG 1 cut(s) 1067
MvnI CGCG 1 cut(s) 1376
MwoI GCNNNNNNNGC 4 cut(s) 1373, 1437, 1498, 1531
NcoI CCATGG 1 cut(s) 1502
NdeI CATATG 2 cut(s) 1240, 1416
NdeII GATC 4 cut(s) 75, 1216, 1258, 1476
NlaIII CATG 7 cut(s) 424, 563, 759, 893, 902, 1413, 1506
NlaIV GGNNCC 1 cut(s) 1354
NmeAIII GCCGAG 1 cut(s) 45
NmuCI GTSAC 3 cut(s) 92, 1385, 1583
NsiI ATGCAT 1 cut(s) 753
PctI GAATGC 2 cut(s) 510, 751
PdmI GAANNNNTTC 2 cut(s) 1178, 1253
PfeI GAWTC 4 cut(s) 260, 452, 895, 1318
PkrI GCNGC 8 cut(s) 6, 50, 88, 414, 490, 655, 1471, 1533
PleI GAGTC 1 cut(s) 1397
PpsI GAGTC 1 cut(s) 1397
Ppu21I YACGTR 1 cut(s) 1390
PsiI TTATAA 1 cut(s) 288
Psp6I CCWGG 1 cut(s) 1065
PspFI CCCAGC 1 cut(s) 905
PspGI CCWGG 1 cut(s) 1065
PspN4I GGNNCC 1 cut(s) 1354
PspPI GGNCC 2 cut(s) 233, 1542
PsuI RGATCY 1 cut(s) 1216
RsaI GTAC 1 cut(s) 1392
RsaNI GTAC 1 cut(s) 1391
RseI CAYNNNNRTG 3 cut(s) 387, 870, 1485
SaqAI TTAA 5 cut(s) 128, 768, 798, 1076, 1169
SatI GCNGC 8 cut(s) 5, 49, 87, 413, 489, 654, 1470, 1532
Sau3AI GATC 4 cut(s) 75, 1216, 1258, 1476
Sau96I GGNCC 2 cut(s) 233, 1542
SchI GAGTC 1 cut(s) 1397
ScrFI CCNGG 1 cut(s) 1067
SfaNI GCATC 2 cut(s) 379, 1534
SinI GGWCC 2 cut(s) 233, 1542
SmiMI CAYNNNNRTG 3 cut(s) 387, 870, 1485
SmlI CTYRAG 2 cut(s) 182, 312
SmoI CTYRAG 2 cut(s) 182, 312
Sse9I AATT 9 cut(s) 291, 318, 343, 458, 705, 769, 786, 950, 1183
SsiI CCGC 6 cut(s) 168, 226, 675, 743, 1196, 1531
SspI AATATT 2 cut(s) 545, 646
SspMI CTAG 4 cut(s) 272, 276, 960, 1421
StyD4I CCNGG 1 cut(s) 1065
StyI CCWWGG 1 cut(s) 1502
TaaI ACNGT 1 cut(s) 1583
TaiI ACGT 5 cut(s) 241, 442, 1298, 1392, 1554
TaqI TCGA 6 cut(s) 44, 455, 565, 934, 1257, 1521
TasI AATT 9 cut(s) 291, 318, 343, 458, 705, 769, 786, 950, 1183
TauI GCSGC 1 cut(s) 1534
TfiI GAWTC 4 cut(s) 260, 452, 895, 1318
Tru1I TTAA 5 cut(s) 128, 768, 798, 1076, 1169
Tru9I TTAA 5 cut(s) 128, 768, 798, 1076, 1169
TscAI CASTG 1 cut(s) 1479
TseFI GTSAC 3 cut(s) 92, 1385, 1583
TseI GCWGC 7 cut(s) 4, 48, 86, 412, 488, 653, 1469
Tsp45I GTSAC 3 cut(s) 92, 1385, 1583
TspGWI ACGGA 1 cut(s) 653
TspRI CASTG 1 cut(s) 1479
VpaK11BI GGWCC 2 cut(s) 233, 1542
XapI RAATTY 4 cut(s) 291, 318, 343, 458
XbaI TCTAGA 1 cut(s) 959
XmnI GAANNNNTTC 2 cut(s) 1178, 1253
XspI CTAG 4 cut(s) 272, 276, 960, 1421
Zsp2I ATGCAT 1 cut(s) 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.