Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007713

Physical Location & Seq

Genomic Coordinates Forward (+)

65400040 .. 65408204

Gene Structure 8165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0522800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGTTTCGAGTTTTGGATCCACCCAGATGAAGTTCCGGATTGGATGTGTGTTGTTTGTTGTGTTGTGCCTTTGTTGTTCTGGAGCAGAGTCCCGGTGCAGTAGTAGCAAAAGCTGCGATGCTTTGGGTTCTTATTACATGTGGCAGAACGCCACTCTCGACTTCGTCGGAACGGTGATGGACACCAGCGCCGACATCATCGTCAGCTACAACAAAGCGACGGTGCCGAACAAGGACAGTGTTCAAACTGGTTTGAGGGTCAATGTTCCGTTCAGCTGTGGCTGCATAAATGAATCGTTTCTGGGCCACGTGTTCAAGTACGACGTCGTCTCCGGCGACACGTACGAAAAGGTTGCGACGGAGTACTATGCCAATCTGACCACGGCAGATGCCATGGCGTCGTTCAATGACTACCCTGCGAATAACATACCCAATACGAATACGAAGCTGAATGTGGTGGTCAACTGTTCGTGTGGGAATAGCGCGGTTTCCGAGGACTATGGGTTGTTTATCACGTACCCACTTCTGCCCGGAGACAATTTGTCTTCGATTGCTCAGGCGGAGAATCTGGATCTGAGTTTGCTGCAGGAGTATAATCCGGATGTGAACTTTAGCCGAGGGAGTGGCTATGTGTATATTCCAGGCAAAGATCAAAATGGAAGCTATGTGCCTTTGAAGCAAAGTTCAGCTGGACTGGCAGGTGGAGCCATTGCTGGCATAATTGTTGGAGTAATTGCTGGAGTGCTGTTAGTGGCTGGTTTTGTATATTTTGGATTTTACCGAAAGAAGAAGGTGGACACAACTGCACTGTTACCAACATCTGAACAATCTTCTCAAAATGGGCGCTCCCTTGGAATTATCCCAGATAAATCTACTGAAACCAACAGTGCTTCTAGAGGCCCAACAGGCATTACCGTGGACAAATCAGTGGAGTTCTCTTTTGAAGAACTTTCCAGGGCTACTGATAACTTCAGTCTGGCTAATAAGATTGGACAAGGTGGTTTTGGGGCTGTTTACTATGCCGAGCTGAGAGGCGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCCGAATTAAACGTTTTGACTCGTGTACATCACTTGAATCTGGTGCGCTTGATTGGTTATTGTGTTGAGGGATCCCTTTTTCTCGTATATGAATACATTGAAAATGGCAATTTAAGCCAACATCTGCGTGGTTCAGAGAGGGACCCAATACCATGGTCTAATAGAGTGCAGATTGCCCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACTGTTCCTGTTTATATCCACCGTGACATAAAGTCAGCCAATATATTAATAGACAAGAACTACCATGCAAAGGTTGCAGATTTTGGATTGACTAAACTGACTGAAGTTGGAAGTACATCACTCCCCACGCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAGTATGGCGAAGTTTCTCCCAAAGTAGATGTATATGCTTTTGGAGTCGTCCTTTATGAACTAATCTCTGCCAAGGAAGCAGTTGTGAGGGCAAATGCTTCTGGAGCAGAATCAAGGGGCCTTGTTGGTTTGTTCGAGGAAGTCCTTAATCAGCCCGATCCAAGAGAAGAGCTCCAAAAAGTGGTTGACCCTAGGCTTGGAGACAGCTACCCACTTGAATCAGTCCGCAAGATGGCCCAACTTGCCAAAGCATGCGTGCATGAGAATAAAGAATTGCGCCCAAGTATGCGATCTATTGTTGTTGCGTTAATGACACTTTCATCATCAACTGAAGATTGGGATGTCGGATCCTTCTACGAAAATCAGTCTCTTGTCAATCTAATGTCAGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009664 GO:0009826 GO:0009832 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010383 GO:0010393 GO:0012505 GO:0016043 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017144 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042546 GO:0042995 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045229 GO:0045488 GO:0045489 GO:0047262 GO:0048229 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0052325 GO:0052546 GO:0060560 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0090406 GO:0120025 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

622

Amino Acids

67.83

Weight (kDa)

5.34

Isoelectric Point (pI)

34.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM_RLK	PF23577	171 - 214	4.4e-18	LysM domain
PK_Tyr_Ser-Thr	PF07714	326 - 593	6.9e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	326 - 591	8.7e-45	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01040 AT3G01040 AT3G01040 AT5G15470
fragaria_vesca	FvH4_6g47380 FvH4_6g47380 FvH4_6g47380 FvH4_6g47380
malus_domestica	MD00G1171900.v1.1 MD09G1061900.v1.1
prunus_persica	Prupe.3G258200_v2.0.a1
pyrus_communis	pycom111g05220 pycom17g05600
rosa_chinensis	RchiOBHm_Chr2g0166431
rosa_laevigata	RLG00000021618
rosa_multiflora	Rmu_sc0003016.1_g000006
rosa_roxburghii	Rroxscaffold_2G00084910
rosa_rugosa	Rorug02G0522800 Rorug02G0522900 Rorug02G0523000
rosa_samantha	Rh2BG601100 Rh2CG571700 Rh2DG611300
rosa_wichuraiana	Rw2G049080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	689
AasI	GACNNNNNNGTC	1 cut(s)	200
AatII	GACGTC	1 cut(s)	327
Acc36I	ACCTGC	1 cut(s)	689
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	1654
AccII	CGCG	2 cut(s)	485, 1432
AccIII	TCCGGA	2 cut(s)	36, 598
AciI	CCGC	3 cut(s)	485, 560, 1699
AclI	AACGTT	1 cut(s)	1098
AclWI	GGATC	8 cut(s)	12, 25, 579, 1152, 1165, 1625, 1815, 1828
AcsI	RAATTY	1 cut(s)	1079
AcuI	CTGAAG	3 cut(s)	955, 1425, 1824
AcvI	CACGTG	1 cut(s)	310
AcyI	GRCGYC	2 cut(s)	324, 398
AfaI	GTAC	6 cut(s)	320, 344, 365, 518, 1113, 1417
AfiI	CCNNNNNNNGG	4 cut(s)	1372, 1654, 1670, 1705
AflIII	ACRYGT	4 cut(s)	138, 309, 339, 1430
AgsI	TTSAA	9 cut(s)	245, 316, 406, 676, 944, 1123, 1187, 1286, 1691
AhdI	GACNNNNNGTC	2 cut(s)	541, 1333
AjnI	CCWGG	3 cut(s)	640, 953, 1263
Alw21I	GWGCWC	1 cut(s)	1647
Alw26I	GTCTC	4 cut(s)	334, 528, 1668, 1845
AlwI	GGATC	8 cut(s)	12, 25, 579, 1152, 1165, 1625, 1815, 1828
Aor13HI	TCCGGA	2 cut(s)	36, 598
AoxI	GGCC	4 cut(s)	304, 898, 1591, 1707
ApeKI	GCWGC	4 cut(s)	114, 282, 583, 1043
ApoI	RAATTY	1 cut(s)	1079
AseI	ATTAAT	1 cut(s)	1349
Asp700I	GAANNNNTTC	2 cut(s)	297, 1290
AspA2I	CCTAGG	1 cut(s)	1664
AspLEI	GCGC	5 cut(s)	191, 485, 846, 1134, 1752
AspS9I	GGNCC	5 cut(s)	304, 899, 1228, 1591, 1708
AsuC2I	CCSGG	2 cut(s)	94, 531
AsuHPI	GGTGA	1 cut(s)	187
AvaII	GGWCC	1 cut(s)	1228
AvrII	CCTAGG	1 cut(s)	1664
BamHI	GGATCC	3 cut(s)	17, 1157, 1820
BanI	GGYRCC	1 cut(s)	223
BanII	GRGCYC	1 cut(s)	1647
BauI	CACGAG	1 cut(s)	1107
BbrPI	CACGTG	1 cut(s)	310
BbsI	GAAGAC	1 cut(s)	537
Bbv12I	GWGCWC	1 cut(s)	1647
BbvI	GCAGC	4 cut(s)	101, 269, 570, 1030
BccI	CCATC	3 cut(s)	172, 1051, 1699
BceAI	ACGGC	1 cut(s)	399
BcgI	CGANNNNNNTGC	4 cut(s)	335, 369, 1025, 1059
BciT130I	CCWGG	3 cut(s)	642, 955, 1265
BciVI	GTATCC	1 cut(s)	1445
BcnI	CCSGG	2 cut(s)	94, 531
BcoDI	GTCTC	4 cut(s)	334, 528, 1668, 1845
BfaI	CTAG	2 cut(s)	894, 1665
BfmI	CTRYAG	1 cut(s)	584
BfoI	RGCGCY	2 cut(s)	192, 847
BfuAI	ACCTGC	1 cut(s)	689
BfuI	GTATCC	1 cut(s)	1445
BglI	GCCNNNNNGGC	1 cut(s)	906
BisI	GCNGC	4 cut(s)	115, 283, 584, 1044
BlnI	CCTAGG	1 cut(s)	1664
BlsI	GCNGC	4 cut(s)	116, 284, 585, 1045
BmcAI	AGTACT	1 cut(s)	365
Bme1390I	CCNGG	5 cut(s)	94, 531, 642, 955, 1265
Bme18I	GGWCC	1 cut(s)	1228
BmeRI	GACNNNNNGTC	2 cut(s)	541, 1333
BmgT120I	GGNCC	5 cut(s)	304, 899, 1228, 1591, 1708
BmiI	GGNNCC	8 cut(s)	19, 225, 706, 1159, 1229, 1230, 1592, 1822
BmrFI	CCNGG	5 cut(s)	94, 531, 642, 955, 1265
BmsI	GCATC	3 cut(s)	109, 379, 1079
BpiI	GAAGAC	1 cut(s)	537
BplI	GAGNNNNNCTC	2 cut(s)	1629, 1661
BpmI	CTGGAG	3 cut(s)	102, 759, 1596
Bpu10I	CCTNAGC	1 cut(s)	555
BpuMI	CCSGG	2 cut(s)	94, 531
BsaAI	YACGTR	3 cut(s)	310, 342, 516
BsaHI	GRCGYC	2 cut(s)	324, 398
BsaWI	WCCGGW	2 cut(s)	36, 598
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	4 cut(s)	1372, 1654, 1670, 1705
Bse1I	ACTGG	2 cut(s)	253, 699
Bse3DI	GCAATG	1 cut(s)	708
BseAI	TCCGGA	2 cut(s)	36, 598
BseBI	CCWGG	3 cut(s)	642, 955, 1265
BseGI	GGATG	3 cut(s)	50, 607, 1819
BseLI	CCNNNNNNNGG	4 cut(s)	1372, 1654, 1670, 1705
BseMI	GCAATG	1 cut(s)	708
BseMII	CTCAG	4 cut(s)	566, 569, 1019, 1487
BseNI	ACTGG	2 cut(s)	253, 699
BseXI	GCAGC	4 cut(s)	101, 269, 570, 1030
BsgI	GTGCAG	3 cut(s)	118, 789, 1274
Bsh1236I	CGCG	2 cut(s)	485, 1432
BshFI	GGCC	4 cut(s)	306, 900, 1593, 1709
BshNI	GGYRCC	1 cut(s)	223
BsiHKAI	GWGCWC	1 cut(s)	1647
BsiSI	CCGG	5 cut(s)	37, 94, 333, 531, 599
BsiWI	CGTACG	1 cut(s)	342
BslFI	GGGAC	2 cut(s)	76, 1241
BslI	CCNNNNNNNGG	4 cut(s)	1372, 1654, 1670, 1705
BsmAI	GTCTC	4 cut(s)	334, 528, 1668, 1845
BsmBI	CGTCTC	1 cut(s)	334
BsmFI	GGGAC	2 cut(s)	76, 1241
BsnI	GGCC	4 cut(s)	306, 900, 1593, 1709
Bsp1286I	GDGCHC	1 cut(s)	1647
Bsp13I	TCCGGA	2 cut(s)	36, 598
Bsp1407I	TGTACA	1 cut(s)	1111
Bsp143I	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
Bsp19I	CCATGG	2 cut(s)	393, 1238
BspACI	CCGC	3 cut(s)	485, 560, 1699
BspANI	GGCC	4 cut(s)	306, 900, 1593, 1709
BspCNI	CTCAG	4 cut(s)	567, 568, 1020, 1486
BspEI	TCCGGA	2 cut(s)	36, 598
BspFNI	CGCG	2 cut(s)	485, 1432
BspHI	TCATGA	1 cut(s)	1294
BspLI	GGNNCC	8 cut(s)	19, 225, 706, 1159, 1229, 1230, 1592, 1822
BspMAI	CTGCAG	1 cut(s)	588
BspMI	ACCTGC	1 cut(s)	689
BspPI	GGATC	8 cut(s)	12, 25, 579, 1152, 1165, 1625, 1815, 1828
BspQI	GCTCTTC	1 cut(s)	1635
BspT107I	GGYRCC	1 cut(s)	223
BsrDI	GCAATG	1 cut(s)	708
BsrGI	TGTACA	1 cut(s)	1111
BsrI	ACTGG	2 cut(s)	253, 699
BssMI	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
BssNI	GRCGYC	2 cut(s)	324, 398
BssSI	CACGAG	1 cut(s)	1107
BssT1I	CCWWGG	5 cut(s)	393, 850, 1238, 1545, 1664
Bst2BI	CACGAG	1 cut(s)	1107
Bst2UI	CCWGG	3 cut(s)	642, 955, 1265
Bst4CI	ACNGT	9 cut(s)	175, 223, 239, 467, 810, 887, 916, 1306, 1325
Bst6I	CTCTTC	1 cut(s)	1635
BstACI	GRCGYC	2 cut(s)	324, 398
BstAPI	GCANNNNNTGC	2 cut(s)	114, 1376
BstAUI	TGTACA	1 cut(s)	1111
BstBAI	YACGTR	3 cut(s)	310, 342, 516
BstC8I	GCNNGC	4 cut(s)	715, 1068, 1726, 1730
BstDEI	CTNAG	4 cut(s)	555, 575, 1028, 1473
BstDSI	CCRYGG	4 cut(s)	381, 393, 915, 1238
BstF5I	GGATG	3 cut(s)	50, 607, 1819
BstFNI	CGCG	2 cut(s)	485, 1432
BstH2I	RGCGCY	2 cut(s)	192, 847
BstHHI	GCGC	5 cut(s)	191, 485, 846, 1134, 1752
BstKTI	GATC	7 cut(s)	20, 574, 652, 1160, 1633, 1766, 1823
BstMAI	GTCTC	4 cut(s)	334, 528, 1668, 1845
BstMBI	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
BstNI	CCWGG	3 cut(s)	642, 955, 1265
BstNSI	RCATGY	3 cut(s)	142, 1459, 1728
BstSCI	CCNGG	5 cut(s)	92, 529, 640, 953, 1263
BstSFI	CTRYAG	1 cut(s)	584
BstUI	CGCG	2 cut(s)	485, 1432
BstV1I	GCAGC	4 cut(s)	101, 269, 570, 1030
BstV2I	GAAGAC	1 cut(s)	537
BstX2I	RGATCY	4 cut(s)	17, 571, 1157, 1820
BstXI	CCANNNNNNTGG	1 cut(s)	1239
BstYI	RGATCY	4 cut(s)	17, 571, 1157, 1820
BsuI	GTATCC	1 cut(s)	1445
BsuRI	GGCC	4 cut(s)	306, 900, 1593, 1709
BtgI	CCRYGG	4 cut(s)	381, 393, 915, 1238
BtgZI	GCGATG	1 cut(s)	132
BtsCI	GGATG	3 cut(s)	50, 607, 1819
BtsIMutI	CAGTG	4 cut(s)	244, 806, 892, 933
BveI	ACCTGC	1 cut(s)	689
Cac8I	GCNNGC	4 cut(s)	715, 1068, 1726, 1730
CciI	TCATGA	1 cut(s)	1294
CfoI	GCGC	5 cut(s)	191, 485, 846, 1134, 1752
Cfr13I	GGNCC	5 cut(s)	304, 899, 1228, 1591, 1708
CseI	GACGC	2 cut(s)	387, 1421
Csp6I	GTAC	6 cut(s)	319, 343, 364, 517, 1112, 1416
CspCI	CAANNNNNGTGG	2 cut(s)	1417, 1452
CviAII	CATG	8 cut(s)	139, 394, 1239, 1295, 1367, 1456, 1725, 1733
CviQI	GTAC	6 cut(s)	319, 343, 364, 517, 1112, 1416
DdeI	CTNAG	4 cut(s)	555, 575, 1028, 1473
DpnI	GATC	7 cut(s)	19, 573, 651, 1159, 1632, 1765, 1822
DpnII	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
DrdI	GACNNNNNNGTC	1 cut(s)	200
DriI	GACNNNNNGTC	2 cut(s)	541, 1333
DseDI	GACNNNNNNGTC	1 cut(s)	200
Eam1104I	CTCTTC	1 cut(s)	1635
Eam1105I	GACNNNNNGTC	2 cut(s)	541, 1333
EarI	CTCTTC	1 cut(s)	1635
EciI	GGCGGA	1 cut(s)	575
Ecl136II	GAGCTC	1 cut(s)	1645
Eco130I	CCWWGG	5 cut(s)	393, 850, 1238, 1545, 1664
Eco24I	GRGCYC	1 cut(s)	1647
Eco47I	GGWCC	1 cut(s)	1228
Eco53kI	GAGCTC	1 cut(s)	1645
Eco57I	CTGAAG	3 cut(s)	955, 1425, 1824
Eco72I	CACGTG	1 cut(s)	310
EcoICRI	GAGCTC	1 cut(s)	1645
EcoO109I	RGGNCCY	2 cut(s)	1228, 1591
EcoRII	CCWGG	3 cut(s)	640, 953, 1263
EcoT14I	CCWWGG	5 cut(s)	393, 850, 1238, 1545, 1664
EcoT38I	GRGCYC	1 cut(s)	1647
ErhI	CCWWGG	5 cut(s)	393, 850, 1238, 1545, 1664
Esp3I	CGTCTC	1 cut(s)	334
FaeI	CATG	8 cut(s)	142, 397, 1242, 1298, 1370, 1459, 1728, 1736
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	2 cut(s)	76, 1241
FatI	CATG	8 cut(s)	138, 393, 1238, 1294, 1366, 1455, 1724, 1732
Fnu4HI	GCNGC	4 cut(s)	115, 283, 584, 1044
FokI	GGATG	3 cut(s)	57, 614, 1826
FriOI	GRGCYC	1 cut(s)	1647
Fsp4HI	GCNGC	4 cut(s)	115, 283, 584, 1044
FspBI	CTAG	2 cut(s)	894, 1665
GlaI	GCGC	5 cut(s)	190, 484, 845, 1133, 1751
GluI	GCNGC	4 cut(s)	115, 283, 584, 1044
GsuI	CTGGAG	3 cut(s)	102, 759, 1596
HaeII	RGCGCY	2 cut(s)	192, 847
HaeIII	GGCC	4 cut(s)	306, 900, 1593, 1709
HapII	CCGG	5 cut(s)	37, 94, 333, 531, 599
HgaI	GACGC	2 cut(s)	387, 1421
HhaI	GCGC	5 cut(s)	191, 485, 846, 1134, 1752
Hin1I	GRCGYC	2 cut(s)	324, 398
Hin1II	CATG	8 cut(s)	142, 397, 1242, 1298, 1370, 1459, 1728, 1736
Hin6I	GCGC	5 cut(s)	189, 483, 844, 1132, 1750
HinP1I	GCGC	5 cut(s)	189, 483, 844, 1132, 1750
HincII	GTYRAC	2 cut(s)	463, 1660
HindII	GTYRAC	2 cut(s)	463, 1660
HinfI	GANTC	9 cut(s)	89, 293, 565, 1105, 1123, 1268, 1518, 1583, 1691
HpaII	CCGG	5 cut(s)	37, 94, 333, 531, 599
HphI	GGTGA	1 cut(s)	187
Hpy166II	GTNNAC	7 cut(s)	463, 607, 796, 919, 1015, 1112, 1660
Hpy188I	TCNGA	7 cut(s)	170, 378, 493, 576, 823, 1222, 1820
Hpy8I	GTNNAC	7 cut(s)	463, 607, 796, 919, 1015, 1112, 1660
Hpy99I	CGWCG	6 cut(s)	170, 223, 326, 329, 361, 403
HpyAV	CCTTC	3 cut(s)	784, 1834, 1857
HpyCH4III	ACNGT	9 cut(s)	175, 223, 239, 467, 810, 887, 916, 1306, 1325
HpyCH4IV	ACGT	5 cut(s)	309, 324, 341, 515, 1098
HpyF3I	CTNAG	4 cut(s)	555, 575, 1028, 1473
HpySE526I	ACGT	5 cut(s)	309, 324, 341, 515, 1098
Hsp92I	GRCGYC	2 cut(s)	324, 398
Hsp92II	CATG	8 cut(s)	142, 397, 1242, 1298, 1370, 1459, 1728, 1736
HspAI	GCGC	5 cut(s)	189, 483, 844, 1132, 1750
KflI	GGGWCCC	1 cut(s)	1228
Kpn2I	TCCGGA	2 cut(s)	36, 598
Kzo9I	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
LguI	GCTCTTC	1 cut(s)	1635
LmnI	GCTCC	5 cut(s)	83, 704, 851, 1577, 1650
Lsp1109I	GCAGC	4 cut(s)	101, 269, 570, 1030
LweI	GCATC	3 cut(s)	109, 379, 1079
MaeI	CTAG	2 cut(s)	894, 1665
MaeII	ACGT	5 cut(s)	309, 324, 341, 515, 1098
MaeIII	GTNAC	2 cut(s)	810, 1325
MalI	GATC	7 cut(s)	19, 573, 651, 1159, 1632, 1765, 1822
MboI	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
MboII	GAAGA	7 cut(s)	537, 799, 822, 956, 1066, 1652, 1817
MflI	RGATCY	4 cut(s)	17, 571, 1157, 1820
MhlI	GDGCHC	1 cut(s)	1647
MluCI	AATT	8 cut(s)	538, 720, 732, 855, 1079, 1091, 1195, 1745
MluI	ACGCGT	1 cut(s)	1430
MlyI	GAGTC	3 cut(s)	98, 1099, 1527
MmeI	TCCRAC	4 cut(s)	148, 706, 1390, 1798
MroI	TCCGGA	2 cut(s)	36, 598
MroXI	GAANNNNTTC	2 cut(s)	297, 1290
MseI	TTAA	5 cut(s)	1094, 1199, 1349, 1620, 1781
MslI	CAYNNNNRTG	3 cut(s)	26, 914, 1212
MspA1I	CMGCKG	2 cut(s)	276, 689
MspI	CCGG	5 cut(s)	37, 94, 333, 531, 599
MspR9I	CCNGG	5 cut(s)	94, 531, 642, 955, 1265
MvaI	CCWGG	3 cut(s)	642, 955, 1265
MvnI	CGCG	2 cut(s)	485, 1432
NciI	CCSGG	2 cut(s)	94, 531
NcoI	CCATGG	2 cut(s)	393, 1238
NdeII	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
NlaIII	CATG	8 cut(s)	142, 397, 1242, 1298, 1370, 1459, 1728, 1736
NlaIV	GGNNCC	8 cut(s)	19, 225, 706, 1159, 1229, 1230, 1592, 1822
NmeAIII	GCCGAG	2 cut(s)	641, 1048
NmuCI	GTSAC	1 cut(s)	1325
NspI	RCATGY	3 cut(s)	142, 1459, 1728
PaeI	GCATGC	1 cut(s)	1728
PagI	TCATGA	1 cut(s)	1294
PaqCI	CACCTGC	1 cut(s)	689
PciI	ACATGT	1 cut(s)	138
PciSI	GCTCTTC	1 cut(s)	1635
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 333
PdmI	GAANNNNTTC	2 cut(s)	297, 1290
PfeI	GAWTC	6 cut(s)	293, 565, 1123, 1268, 1583, 1691
Pfl23II	CGTACG	1 cut(s)	342
PflFI	GACNNNGTC	2 cut(s)	164, 326
PflMI	CCANNNNNTGG	1 cut(s)	1654
PkrI	GCNGC	4 cut(s)	116, 284, 585, 1045
PleI	GAGTC	3 cut(s)	97, 1099, 1526
PmaCI	CACGTG	1 cut(s)	310
PmlI	CACGTG	1 cut(s)	310
PpsI	GAGTC	3 cut(s)	97, 1099, 1526
Ppu21I	YACGTR	3 cut(s)	310, 342, 516
PpuMI	RGGWCCY	1 cut(s)	1228
PscI	ACATGT	1 cut(s)	138
PshBI	ATTAAT	1 cut(s)	1349
Psp124BI	GAGCTC	1 cut(s)	1647
Psp1406I	AACGTT	1 cut(s)	1098
Psp5II	RGGWCCY	1 cut(s)	1228
Psp6I	CCWGG	3 cut(s)	640, 953, 1263
PspCI	CACGTG	1 cut(s)	310
PspGI	CCWGG	3 cut(s)	640, 953, 1263
PspLI	CGTACG	1 cut(s)	342
PspN4I	GGNNCC	8 cut(s)	19, 225, 706, 1159, 1229, 1230, 1592, 1822
PspPI	GGNCC	5 cut(s)	304, 899, 1228, 1591, 1708
PspPPI	RGGWCCY	1 cut(s)	1228
PstI	CTGCAG	1 cut(s)	588
PsuI	RGATCY	4 cut(s)	17, 571, 1157, 1820
PsyI	GACNNNGTC	2 cut(s)	164, 326
PvuII	CAGCTG	2 cut(s)	276, 689
RsaI	GTAC	6 cut(s)	320, 344, 365, 518, 1113, 1417
RsaNI	GTAC	6 cut(s)	319, 343, 364, 517, 1112, 1416
RseI	CAYNNNNRTG	3 cut(s)	26, 914, 1212
SacI	GAGCTC	1 cut(s)	1647
SapI	GCTCTTC	1 cut(s)	1635
SaqAI	TTAA	5 cut(s)	1094, 1199, 1349, 1620, 1781
SatI	GCNGC	4 cut(s)	115, 283, 584, 1044
Sau3AI	GATC	7 cut(s)	17, 571, 649, 1157, 1630, 1763, 1820
Sau96I	GGNCC	5 cut(s)	304, 899, 1228, 1591, 1708
ScaI	AGTACT	1 cut(s)	365
SchI	GAGTC	3 cut(s)	98, 1099, 1527
ScrFI	CCNGG	5 cut(s)	94, 531, 642, 955, 1265
SduI	GDGCHC	1 cut(s)	1647
SfaNI	GCATC	3 cut(s)	109, 379, 1079
SfcI	CTRYAG	1 cut(s)	584
SinI	GGWCC	1 cut(s)	1228
SmiMI	CAYNNNNRTG	3 cut(s)	26, 914, 1212
SphI	GCATGC	1 cut(s)	1728
Sse9I	AATT	8 cut(s)	538, 720, 732, 855, 1079, 1091, 1195, 1745
SsiI	CCGC	3 cut(s)	485, 560, 1699
SspMI	CTAG	2 cut(s)	894, 1665
SstI	GAGCTC	1 cut(s)	1647
StyD4I	CCNGG	5 cut(s)	92, 529, 640, 953, 1263
StyI	CCWWGG	5 cut(s)	393, 850, 1238, 1545, 1664
TaaI	ACNGT	9 cut(s)	175, 223, 239, 467, 810, 887, 916, 1306, 1325
TaiI	ACGT	5 cut(s)	312, 327, 344, 518, 1101
TaqI	TCGA	4 cut(s)	8, 159, 548, 1608
TasI	AATT	8 cut(s)	538, 720, 732, 855, 1079, 1091, 1195, 1745
TatI	WGTACW	3 cut(s)	363, 1111, 1415
TfiI	GAWTC	6 cut(s)	293, 565, 1123, 1268, 1583, 1691
Tru1I	TTAA	5 cut(s)	1094, 1199, 1349, 1620, 1781
Tru9I	TTAA	5 cut(s)	1094, 1199, 1349, 1620, 1781
TscAI	CASTG	4 cut(s)	244, 813, 892, 933
TseFI	GTSAC	1 cut(s)	1325
TseI	GCWGC	4 cut(s)	114, 282, 583, 1043
Tsp45I	GTSAC	1 cut(s)	1325
TspDTI	ATGAA	6 cut(s)	44, 306, 1191, 1283, 1545, 1782
TspGWI	ACGGA	2 cut(s)	258, 374
TspRI	CASTG	4 cut(s)	244, 813, 892, 933
Tth111I	GACNNNGTC	2 cut(s)	164, 326
Van91I	CCANNNNNTGG	1 cut(s)	1654
VpaK11BI	GGWCC	1 cut(s)	1228
VspI	ATTAAT	1 cut(s)	1349
XapI	RAATTY	1 cut(s)	1079
XbaI	TCTAGA	1 cut(s)	893
XceI	RCATGY	3 cut(s)	142, 1459, 1728
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1211, 1435
XmaJI	CCTAGG	1 cut(s)	1664
XmnI	GAANNNNTTC	2 cut(s)	297, 1290
XspI	CTAG	2 cut(s)	894, 1665
ZraI	GACGTC	1 cut(s)	325
ZrmI	AGTACT	1 cut(s)	365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.