AT5G19310
NAC Family

ATP-dependent DNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011969
Physical Location & Seq
Forward (+)
6498743 .. 6503692
4950 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G19310.2

Sequence Viewer

Length: 3195 bp
ATGGTGAAGCAGCTACAAGAGCAGGAGGAGAACGATCCCGTCGAGAAGACAAAGTCTCTGATCTCTGCTCTTAACTACCTTTCTCGCGACCTTCTCTTGCCTTCTCACCTTTACGCTTCCGTTTCTTCTATTTACCATGCCTCCGTCTCCGATCTCTCTCCTTCTCCGCCTCTTCGTGGAAATAGTTATACTCCCAATAGAGGTGATTTGATGAGCGAGTTCGAAGATGCACTTTTGCAACAGCGACTAAACTATGAATCAGGCTCTCGACTAGCCGAGTTAAAGGAAACTCGGTATAAGAATCGTATCCACAACCGATTATCTCAACTTGAAGGATTACCTTCCAATAGAGGTGAAGATTTGCAGGAAAAATGCTTACTTGAGCTTTATGGTCTTAAGTTACAAGAACTACAATGCAGGGTTCGGGGTGAGGTGAGTGCGGAATACTGGCTGCGTTTGAATTGTGCAGATCCGGAGAGACAACTATATGATTGGGGCATGATGCGGTTGCCTCGCCGAATGTATGGGGTTGGAGATTCTTTTGTTATGGAAGCTGATGATCAGTTCAGGAACAAGCGTGATGCCGAGAGGTTATTACGGTTAGAAGAAGAGGAGAAGAATCTGATTGAAACGACACAGAGGAAATTCTTTGCAGAAGTACTCAATGCTGTTCGTGAATTCCAGTTGCAAATTCAGGCGTCTCATAGACGGTGTAAGCAAAGAAATGATGGTGTCCAGGCCTGGCATGGAAAGCAAAGGCAACGTGCCACCCGAGCTGAAAAACTAAGGATCATGGCCCTTAAATCTGATGATCAAGAGGAATACATGAAACTAGCAAAGGAAAGTAAGAACGAAAAACTAACCCTTTTTCTAGAGGAGACAAACAAAATCTTTGTTAGTTTGGGGGCTGCAGTCCAGCGTCAGAAAGATGCCAAACTTTCAGAAAACACCAAATTACTGAAAGGCTCAGAATCTGACTTATCTGATGTTGATGCTCCTGAGGATGTGCTTCCTGCCCAAGATATTGAGATCATTGACTCTGACAATAATGATGATTCTAATGACTTACTAGAAGGCGAGAGGCAGTTTAACTTGGCTATCCATTCCATACAAGAGAAGGTGACAAAGCAGCCATCCCTTCTACAAGGTGGGGAACTAAGATCCTATCAATTAGAAGGACTTCAATGGATGGTCTCTCTATACAACAATGACTATAATGGCATTTTAGCTGATGAAATGGGTTTAGGAAAGACTATCCAAACGATTGCACTGATTGCGTATCTTCTTGAGAGTAAAGATCTTCATGGGCCTCATCTAATATTGGCTCCAAAAGCTGTGCTACCAAATTGGGAAAATGAGTTTGCATTATGGGCACCCAGCATTTCCGCTTTTCTTTACGATGGATCAAAGGAGAAAAGAACTGAAATAAGAGCAAGAATAGCAGGAGGAAAATTTAATGTGTTGATAACCCACTACGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGACTGGAACTACATGATTGTTGATGAAGGACATCGTCTGAAGAACCATGAATGTGCTCTCGCAAAGACTCTAGGAACTGGCTACCGGATTAAGCGCAGACTTCTATTAACTGGAACTCCCATACAGAACAGTCTGCAAGAACTATGGTCGCTGCTTAATTTTCTTCTTCCTCACATCTTTAACTCAATTCATAATTTCGAAGAATGGTTTAATACTCCATTCGCAGAATGTGGTAGTGCCAGTCTTACAGATGAAGAGGAGCTGTTGATTATTAACCGTCTGCATCATGTCATAAGGCCGTTTCTACTGAGAAGGAAAAAAAGTGAGGTTGAGAAATTCCTTCCTGGAAAGACACAAGTCATACTGAAGTGTGATATGTCGGCTTGGCAAAAATTGTATTACAAACAAGTTACAGACGTAGGCAGGGTCGGTCTTCATTCTGGCAATGGGAAATCAAAGAGTCTGCAGAATCTGACAATGCAATTAAGAAAGTGTTGTAACCATCCGTACCTATTCGTTGGAGCAGATTATAACATGTGTAAGAAGCCTGAGATTGTGAGAGCTTCAGGAAAATTCGAGTTACTTGATCGCCTCCTTCCAAAACTGAAGAAAGCTGGACATAGAATTCTGCTCTTTTCTCAAATGACTCGTCTCATTGACCTTCTCGAAATTTACTTGTCACTCAATGACTACATGTACCTCAGACTTGACGGTAGCACAAAGACAGACCAAAGAGGGATTTTACTGAAGCAATTCAACGAACCGGACTCTCCCTACTTTATGTTTCTTCTGAGCACACGTGCTGGTGGTCTTGGTTTGAACTTACAAACTGCAGACACTATAATTATATTTGACAGTGATTGGAATCCACAAATGGACCAGCAAGCAGAGGATCGTGCTCATCGGATAGGGCAGAAAAAGGAAGTGAGAGTTTTTGTTTTGGTTAGCATTGGATCCATTGAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATCGATGCGAAAGTCATACAAGCAGGGCTCTTCAACACAACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAAGAGATCATGAGCAAAGGAACAAGCTCACTGGGAGAAGATGTGCCAAGTGAGAGAGAGATTAACCGGCTCGCAGCTCGAACTGAGGAAGAGTTTTGGATGTTTGAACAAATGGACGAGGAAAGACGTAAAAAGGAGAACTACAAGACACGTCTCATGGAAGAGAAGGAAGTTCCCGAGTGGGCTTACACTTCAGAGACTCAAGAAGACAAGACTAACGCGAAAAACCATTTTGGTAGCCTCACGGGTAAACGGAAACGAAAAGAAGCAGTGTATAGCGACTCTTTAAGCGATTTGCAGTGGATGAAAGCGATGGAGAGTGAAGACGAAGATGCTTCCAAAGTCTCTCAGAAACGAAAGAGAACGGACACAAAGACAAGAATGAGTAATGGGTCAAAGGCAGAGGCTGTGTTGAGTGAAAGCGATGAGGAAAAAGAAGAAGAAGAAGAAGAAAGGAAGGAGGAGAGTGGGAAAGAGAGTGAAGAAGAAAATGAGAAGCCATTACATAGTTGGAAAACTAATAAGAAGAAACGGTCAAGATACCCTGTTATGACTTCTTCACCTAATTCTAGAGGTAAAGGTAGCTCAAAAGGAAGTAAACGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0000902 GO:0001085 GO:0001101 GO:0001102 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006996 GO:0007154 GO:0007275 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009311 GO:0009313 GO:0009408 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010015 GO:0010035 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010453 GO:0010455 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016049 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0021700 GO:0022414 GO:0022611 GO:0022622 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040007 GO:0040008 GO:0042148 GO:0042221 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0060560 GO:0061412 GO:0061458 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071695 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0097437 GO:0098727 GO:0099402 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1905392 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

1064

Amino Acids

122.89

Weight (kDa)

6.48

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 121 - 282 1.4e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 125 - 412 3.4e-94 SNF2-related domain
HDA2-3 PF11496 393 - 571 3.2e-09 Class II histone deacetylase complex subunits 2 and 3
Helicase_C PF00271 432 - 545 2.8e-24 Helicase conserved C-terminal domain
SnAC PF14619 638 - 700 6.4e-13 Snf2-ATP coupling, chromatin remodelling complex
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011969)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G06010 AT5G19310 AT5G19310
fragaria_vesca FvH4_4g14970
malus_domestica MD13G1186900.v1.1 MD16G1187800.v1.1
prunus_persica Prupe.1G154600_v2.0.a1 Prupe.1G154600_v2.0.a1
pyrus_communis pycom13g16190
rosa_chinensis RchiOBHm_Chr4g0417121
rosa_laevigata RLG00000007930
rosa_multiflora Rmu_ssc0000010.1_g000026
rosa_roxburghii Rroxscaffold_5G00360900
rosa_rugosa Rorug04G0146000
rosa_samantha Rh4AG208500 Rh4BG205700 Rh4CG219500 Rh4DG206400
rosa_wichuraiana Rw4G017670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2046
AccB1I GGYRCC 1 cut(s) 1372
AccII CGCG 2 cut(s) 87, 2807
AccIII TCCGGA 1 cut(s) 472
AciI CCGC 4 cut(s) 167, 440, 505, 1386
AclWI GGATC 8 cut(s) 29, 464, 797, 1155, 1411, 2415, 2463, 2476
AcsI RAATTY 8 cut(s) 644, 677, 690, 1451, 1850, 2087, 2139, 2184
AcuI CTGAAG 6 cut(s) 1574, 1901, 2064, 2141, 2282, 2763
AcvI CACGTG 1 cut(s) 2315
AcyI GRCGYC 1 cut(s) 698
AfaI GTAC 3 cut(s) 660, 2024, 2213
AfiI CCNNNNNNNGG 2 cut(s) 176, 200
AflII CTTAAG 1 cut(s) 395
AflIII ACRYGT 4 cut(s) 2049, 2208, 2312, 2735
AjiI CACGTC 1 cut(s) 2738
AjnI CCWGG 3 cut(s) 735, 740, 1858
Alw21I GWGCWC 3 cut(s) 1573, 2312, 2416
AlwI GGATC 8 cut(s) 29, 464, 797, 1155, 1411, 2415, 2463, 2476
AlwNI CAGNNNCTG 3 cut(s) 974, 1987, 2993
Ama87I CYCGRG 2 cut(s) 771, 2762
Aor13HI TCCGGA 1 cut(s) 472
AoxI GGCC 4 cut(s) 738, 795, 1307, 1811
ApeKI GCWGC 6 cut(s) 10, 451, 908, 1129, 1666, 2660
ApoI RAATTY 8 cut(s) 644, 677, 690, 1451, 1850, 2087, 2139, 2184
ArsI GACNNNNNNTTYG 2 cut(s) 2149, 2181
Asp700I GAANNNNTTC 2 cut(s) 1179, 2267
AspLEI GCGC 1 cut(s) 1611
AspS9I GGNCC 3 cut(s) 796, 1307, 2392
AsuHPI GGTGA 8 cut(s) 16, 98, 215, 365, 440, 445, 1132, 3138
AsuII TTCGAA 2 cut(s) 222, 1713
AvaI CYCGRG 2 cut(s) 771, 2762
AvaII GGWCC 1 cut(s) 2392
AxyI CCTNAGG 1 cut(s) 999
BaeGI GKGCMC 1 cut(s) 1375
BamHI GGATCC 1 cut(s) 2468
BanI GGYRCC 1 cut(s) 1372
BanII GRGCYC 1 cut(s) 2544
BbrPI CACGTG 1 cut(s) 2315
BbsI GAAGAC 4 cut(s) 53, 1940, 2799, 2916
Bbv12I GWGCWC 3 cut(s) 1573, 2312, 2416
BbvI GCAGC 6 cut(s) 22, 438, 895, 1141, 1653, 2672
BccI CCATC 7 cut(s) 722, 1141, 1183, 1394, 2025, 2503, 2893
BceAI ACGGC 1 cut(s) 1798
BciT130I CCWGG 3 cut(s) 737, 742, 1860
BciVI GTATCC 1 cut(s) 317
BclI TGATCA 2 cut(s) 559, 811
BfaI CTAG 6 cut(s) 272, 833, 872, 1070, 1586, 3156
BfmI CTRYAG 3 cut(s) 909, 1979, 2346
BfrI CTTAAG 1 cut(s) 395
BfuI GTATCC 1 cut(s) 317
BglII AGATCT 1 cut(s) 1297
BisI GCNGC 6 cut(s) 11, 452, 909, 1130, 1667, 2661
BlsI GCNGC 6 cut(s) 12, 453, 910, 1131, 1668, 2662
BmcAI AGTACT 1 cut(s) 660
Bme1390I CCNGG 3 cut(s) 737, 742, 1860
Bme18I GGWCC 1 cut(s) 2392
BmeT110I CYCGRG 2 cut(s) 771, 2762
BmgBI CACGTC 1 cut(s) 2738
BmgT120I GGNCC 3 cut(s) 796, 1307, 2392
BmiI GGNNCC 3 cut(s) 1326, 1374, 2470
BmrFI CCNGG 3 cut(s) 737, 742, 1860
BmrI ACTGGG 1 cut(s) 2627
BmuI ACTGGG 1 cut(s) 2627
BoxI GACNNNNGTC 1 cut(s) 1871
BpiI GAAGAC 4 cut(s) 53, 1940, 2799, 2916
Bpu14I TTCGAA 2 cut(s) 222, 1713
BpuEI CTTGAG 4 cut(s) 401, 1307, 2550, 2772
Bsa29I ATCGAT 1 cut(s) 2517
BsaAI YACGTR 1 cut(s) 2315
BsaBI GATNNNNATC 2 cut(s) 2379, 2513
BsaHI GRCGYC 1 cut(s) 698
BsaI GGTCTC 1 cut(s) 1198
BsaWI WCCGGW 3 cut(s) 472, 1599, 2278
BsaXI ACNNNNNCTCC 6 cut(s) 125, 155, 1615, 1645, 2613, 2643
Bsc4I CCNNNNNNNGG 2 cut(s) 176, 200
Bse118I RCCGGY 1 cut(s) 2652
Bse1I ACTGG 7 cut(s) 452, 682, 1523, 1597, 1630, 1755, 2622
Bse21I CCTNAGG 1 cut(s) 999
Bse3DI GCAATG 1 cut(s) 1966
Bse8I GATNNNNATC 2 cut(s) 2379, 2513
BseAI TCCGGA 1 cut(s) 472
BseBI CCWGG 3 cut(s) 737, 742, 1860
BseCI ATCGAT 1 cut(s) 2517
BseGI GGATG 6 cut(s) 1009, 1133, 1194, 2017, 2691, 2895
BseJI GATNNNNATC 2 cut(s) 2379, 2513
BseLI CCNNNNNNNGG 2 cut(s) 176, 200
BseMI GCAATG 1 cut(s) 1966
BseMII CTCAG 8 cut(s) 981, 990, 1814, 2055, 2230, 2297, 2661, 2948
BseNI ACTGG 7 cut(s) 452, 682, 1523, 1597, 1630, 1755, 2622
BseRI GAGGAG 5 cut(s) 41, 626, 890, 1787, 3062
BseSI GKGCMC 1 cut(s) 1375
BseXI GCAGC 6 cut(s) 22, 438, 895, 1141, 1653, 2672
BseYI CCCAGC 1 cut(s) 1376
BsgI GTGCAG 1 cut(s) 486
Bsh1236I CGCG 2 cut(s) 87, 2807
BshFI GGCC 4 cut(s) 740, 797, 1309, 1813
BshNI GGYRCC 1 cut(s) 1372
BshVI ATCGAT 1 cut(s) 2517
BsiHKAI GWGCWC 3 cut(s) 1573, 2312, 2416
BsiHKCI CYCGRG 2 cut(s) 771, 2762
BsiSI CCGG 4 cut(s) 473, 1600, 2279, 2653
BslI CCNNNNNNNGG 2 cut(s) 176, 200
BsmBI CGTCTC 4 cut(s) 151, 705, 2171, 2744
BsnI GGCC 4 cut(s) 740, 797, 1309, 1813
Bso31I GGTCTC 1 cut(s) 1198
BsoBI CYCGRG 2 cut(s) 771, 2762
Bsp119I TTCGAA 2 cut(s) 222, 1713
Bsp1286I GDGCHC 5 cut(s) 1375, 1573, 2312, 2416, 2544
Bsp13I TCCGGA 1 cut(s) 472
Bsp68I TCGCGA 1 cut(s) 87
BspACI CCGC 4 cut(s) 167, 440, 505, 1386
BspANI GGCC 4 cut(s) 740, 797, 1309, 1813
BspCNI CTCAG 8 cut(s) 980, 991, 1815, 2056, 2229, 2298, 2662, 2947
BspDI ATCGAT 1 cut(s) 2517
BspEI TCCGGA 1 cut(s) 472
BspFNI CGCG 2 cut(s) 87, 2807
BspHI TCATGA 2 cut(s) 1485, 2595
BspLI GGNNCC 3 cut(s) 1326, 1374, 2470
BspMAI CTGCAG 3 cut(s) 913, 1983, 2350
BspPI GGATC 8 cut(s) 29, 464, 797, 1155, 1411, 2415, 2463, 2476
BspQI GCTCTTC 1 cut(s) 2549
BspT104I TTCGAA 2 cut(s) 222, 1713
BspT107I GGYRCC 1 cut(s) 1372
BspTI CTTAAG 1 cut(s) 395
BspTNI GGTCTC 1 cut(s) 1198
BsrDI GCAATG 1 cut(s) 1966
BsrFI RCCGGY 1 cut(s) 2652
BsrI ACTGG 7 cut(s) 452, 682, 1523, 1597, 1630, 1755, 2622
BssAI RCCGGY 1 cut(s) 2652
BssNI GRCGYC 1 cut(s) 698
Bst2UI CCWGG 3 cut(s) 737, 742, 1860
Bst4CI ACNGT 7 cut(s) 600, 711, 1646, 1793, 2228, 2372, 3120
Bst6I CTCTTC 7 cut(s) 177, 603, 1764, 2549, 2583, 2670, 2742
BstACI GRCGYC 1 cut(s) 698
BstAFI CTTAAG 1 cut(s) 395
BstAPI GCANNNNNTGC 1 cut(s) 1274
BstBAI YACGTR 1 cut(s) 2315
BstBI TTCGAA 2 cut(s) 222, 1713
BstC8I GCNNGC 3 cut(s) 2400, 2496, 2658
BstF5I GGATG 6 cut(s) 1009, 1133, 1194, 2017, 2691, 2895
BstFNI CGCG 2 cut(s) 87, 2807
BstHHI GCGC 1 cut(s) 1611
BstMWI GCNNNNNNNGC 8 cut(s) 19, 751, 773, 1274, 1331, 1370, 1439, 2500
BstNI CCWGG 3 cut(s) 737, 742, 1860
BstNSI RCATGY 2 cut(s) 2053, 2212
BstPAI GACNNNNGTC 1 cut(s) 1871
BstSCI CCNGG 3 cut(s) 735, 740, 1858
BstSFI CTRYAG 3 cut(s) 909, 1979, 2346
BstSLI GKGCMC 1 cut(s) 1375
BstUI CGCG 2 cut(s) 87, 2807
BstV1I GCAGC 6 cut(s) 22, 438, 895, 1141, 1653, 2672
BstV2I GAAGAC 4 cut(s) 53, 1940, 2799, 2916
BstX2I RGATCY 4 cut(s) 469, 1160, 1297, 2468
BstYI RGATCY 4 cut(s) 469, 1160, 1297, 2468
Bsu15I ATCGAT 1 cut(s) 2517
Bsu36I CCTNAGG 1 cut(s) 999
BsuI GTATCC 1 cut(s) 317
BsuRI GGCC 4 cut(s) 740, 797, 1309, 1813
BsuTUI ATCGAT 1 cut(s) 2517
BtgZI GCGATG 2 cut(s) 2912, 3024
BtrI CACGTC 1 cut(s) 2738
BtsCI GGATG 6 cut(s) 1009, 1133, 1194, 2017, 2691, 2895
BtsI GCAGTG 2 cut(s) 2862, 2891
BtsIMutI CAGTG 5 cut(s) 1268, 2377, 2615, 2862, 2891
BtuMI TCGCGA 1 cut(s) 87
Cac8I GCNNGC 3 cut(s) 2400, 2496, 2658
CaiI CAGNNNCTG 3 cut(s) 974, 1987, 2993
CciI TCATGA 2 cut(s) 1485, 2595
CfoI GCGC 1 cut(s) 1611
Cfr10I RCCGGY 1 cut(s) 2652
Cfr13I GGNCC 3 cut(s) 796, 1307, 2392
ClaI ATCGAT 1 cut(s) 2517
CseI GACGC 2 cut(s) 687, 908
Csp6I GTAC 3 cut(s) 659, 2023, 2212
CviQI GTAC 3 cut(s) 659, 2023, 2212
Eam1104I CTCTTC 7 cut(s) 177, 603, 1764, 2549, 2583, 2670, 2742
EarI CTCTTC 7 cut(s) 177, 603, 1764, 2549, 2583, 2670, 2742
EciI GGCGGA 1 cut(s) 156
Eco147I AGGCCT 1 cut(s) 740
Eco24I GRGCYC 1 cut(s) 2544
Eco31I GGTCTC 1 cut(s) 1198
Eco47I GGWCC 1 cut(s) 2392
Eco57I CTGAAG 6 cut(s) 1574, 1901, 2064, 2141, 2282, 2763
Eco72I CACGTG 1 cut(s) 2315
Eco81I CCTNAGG 1 cut(s) 999
Eco88I CYCGRG 2 cut(s) 771, 2762
EcoRI GAATTC 2 cut(s) 677, 2139
EcoRII CCWGG 3 cut(s) 735, 740, 1858
EcoT38I GRGCYC 1 cut(s) 2544
Esp3I CGTCTC 4 cut(s) 151, 705, 2171, 2744
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FbaI TGATCA 2 cut(s) 559, 811
Fnu4HI GCNGC 6 cut(s) 11, 452, 909, 1130, 1667, 2661
FokI GGATG 6 cut(s) 1016, 1120, 1201, 2004, 2698, 2902
FriOI GRGCYC 1 cut(s) 2544
Fsp4HI GCNGC 6 cut(s) 11, 452, 909, 1130, 1667, 2661
FspBI CTAG 6 cut(s) 272, 833, 872, 1070, 1586, 3156
GlaI GCGC 1 cut(s) 1610
GluI GCNGC 6 cut(s) 11, 452, 909, 1130, 1667, 2661
GsaI CCCAGC 1 cut(s) 1380
HaeIII GGCC 4 cut(s) 740, 797, 1309, 1813
HapII CCGG 4 cut(s) 473, 1600, 2279, 2653
HgaI GACGC 2 cut(s) 687, 908
HhaI GCGC 1 cut(s) 1611
Hin1I GRCGYC 1 cut(s) 698
Hin6I GCGC 1 cut(s) 1609
HinP1I GCGC 1 cut(s) 1609
HpaII CCGG 4 cut(s) 473, 1600, 2279, 2653
HphI GGTGA 8 cut(s) 16, 98, 215, 365, 440, 445, 1132, 3138
Hpy166II GTNNAC 2 cut(s) 2837, 3185
Hpy8I GTNNAC 2 cut(s) 2837, 3185
Hpy99I CGWCG 1 cut(s) 44
HpyCH4III ACNGT 7 cut(s) 600, 711, 1646, 1793, 2228, 2372, 3120
HpyCH4IV ACGT 5 cut(s) 763, 1932, 2314, 2713, 2737
HpyF10VI GCNNNNNNNGC 8 cut(s) 19, 751, 773, 1274, 1331, 1370, 1439, 2500
HpySE526I ACGT 5 cut(s) 763, 1932, 2314, 2713, 2737
Hsp92I GRCGYC 1 cut(s) 698
HspAI GCGC 1 cut(s) 1609
Kpn2I TCCGGA 1 cut(s) 472
Ksp22I TGATCA 2 cut(s) 559, 811
LguI GCTCTTC 1 cut(s) 2549
LmnI GCTCC 5 cut(s) 1000, 1330, 1774, 2036, 2491
Lsp1109I GCAGC 6 cut(s) 22, 438, 895, 1141, 1653, 2672
MaeI CTAG 6 cut(s) 272, 833, 872, 1070, 1586, 3156
MaeII ACGT 5 cut(s) 763, 1932, 2314, 2713, 2737
MaeIII GTNAC 6 cut(s) 399, 1120, 1924, 2012, 2094, 2193
MflI RGATCY 4 cut(s) 469, 1160, 1297, 2468
MhlI GDGCHC 5 cut(s) 1375, 1573, 2312, 2416, 2544
MlyI GAGTC 7 cut(s) 1031, 1576, 1984, 2155, 2276, 2779, 2861
MmeI TCCRAC 3 cut(s) 511, 2014, 3077
MroI TCCGGA 1 cut(s) 472
MroXI GAANNNNTTC 2 cut(s) 1179, 2267
MslI CAYNNNNRTG 1 cut(s) 1566
MspCI CTTAAG 1 cut(s) 395
MspI CCGG 4 cut(s) 473, 1600, 2279, 2653
MspR9I CCNGG 3 cut(s) 737, 742, 1860
MvaI CCWGG 3 cut(s) 737, 742, 1860
MvnI CGCG 2 cut(s) 87, 2807
MwoI GCNNNNNNNGC 8 cut(s) 19, 751, 773, 1274, 1331, 1370, 1439, 2500
NlaIV GGNNCC 3 cut(s) 1326, 1374, 2470
NmeAIII GCCGAG 2 cut(s) 301, 610
NmuCI GTSAC 2 cut(s) 1120, 2193
NruI TCGCGA 1 cut(s) 87
NspI RCATGY 2 cut(s) 2053, 2212
NspV TTCGAA 2 cut(s) 222, 1713
PagI TCATGA 2 cut(s) 1485, 2595
PceI AGGCCT 1 cut(s) 740
PciI ACATGT 2 cut(s) 2049, 2208
PciSI GCTCTTC 1 cut(s) 2549
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 769
PdmI GAANNNNTTC 2 cut(s) 1179, 2267
PfeI GAWTC 8 cut(s) 257, 301, 536, 619, 971, 1055, 1984, 2380
PflFI GACNNNGTC 2 cut(s) 52, 1548
PfoI TCCNGGA 1 cut(s) 1858
PkrI GCNGC 6 cut(s) 12, 453, 910, 1131, 1668, 2662
PleI GAGTC 7 cut(s) 1031, 1576, 1983, 2155, 2276, 2779, 2861
PmaCI CACGTG 1 cut(s) 2315
PmlI CACGTG 1 cut(s) 2315
PpsI GAGTC 7 cut(s) 1031, 1576, 1983, 2155, 2276, 2779, 2861
Ppu21I YACGTR 1 cut(s) 2315
PscI ACATGT 2 cut(s) 2049, 2208
PshAI GACNNNNGTC 1 cut(s) 1871
PsiI TTATAA 1 cut(s) 2046
Psp6I CCWGG 3 cut(s) 735, 740, 1858
PspCI CACGTG 1 cut(s) 2315
PspFI CCCAGC 1 cut(s) 1376
PspGI CCWGG 3 cut(s) 735, 740, 1858
PspN4I GGNNCC 3 cut(s) 1326, 1374, 2470
PspPI GGNCC 3 cut(s) 796, 1307, 2392
PstI CTGCAG 3 cut(s) 913, 1983, 2350
PstNI CAGNNNCTG 3 cut(s) 974, 1987, 2993
PsuI RGATCY 4 cut(s) 469, 1160, 1297, 2468
PsyI GACNNNGTC 2 cut(s) 52, 1548
RruI TCGCGA 1 cut(s) 87
RsaI GTAC 3 cut(s) 660, 2024, 2213
RsaNI GTAC 3 cut(s) 659, 2023, 2212
RseI CAYNNNNRTG 1 cut(s) 1566
SapI GCTCTTC 1 cut(s) 2549
SatI GCNGC 6 cut(s) 11, 452, 909, 1130, 1667, 2661
Sau96I GGNCC 3 cut(s) 796, 1307, 2392
ScaI AGTACT 1 cut(s) 660
SchI GAGTC 7 cut(s) 1031, 1576, 1984, 2155, 2276, 2779, 2861
ScrFI CCNGG 3 cut(s) 737, 742, 1860
SduI GDGCHC 5 cut(s) 1375, 1573, 2312, 2416, 2544
SfcI CTRYAG 3 cut(s) 909, 1979, 2346
SfuI TTCGAA 2 cut(s) 222, 1713
SinI GGWCC 1 cut(s) 2392
SmiMI CAYNNNNRTG 1 cut(s) 1566
SmlI CTYRAG 5 cut(s) 380, 395, 1286, 2565, 2787
SmoI CTYRAG 5 cut(s) 380, 395, 1286, 2565, 2787
SseBI AGGCCT 1 cut(s) 740
SsiI CCGC 4 cut(s) 167, 440, 505, 1386
SspI AATATT 2 cut(s) 1320, 2487
SspMI CTAG 6 cut(s) 272, 833, 872, 1070, 1586, 3156
StuI AGGCCT 1 cut(s) 740
StyD4I CCNGG 3 cut(s) 735, 740, 1858
TaaI ACNGT 7 cut(s) 600, 711, 1646, 1793, 2228, 2372, 3120
TaiI ACGT 5 cut(s) 766, 1935, 2317, 2716, 2740
TaqI TCGA 8 cut(s) 42, 222, 268, 1713, 2091, 2181, 2517, 2665
TaqII GACCGA 1 cut(s) 1934
TatI WGTACW 1 cut(s) 658
TfiI GAWTC 8 cut(s) 257, 301, 536, 619, 971, 1055, 1984, 2380
TscAI CASTG 5 cut(s) 1275, 2377, 2622, 2862, 2891
TseFI GTSAC 2 cut(s) 1120, 2193
TseI GCWGC 6 cut(s) 10, 451, 908, 1129, 1666, 2660
Tsp45I GTSAC 2 cut(s) 1120, 2193
TspGWI ACGGA 5 cut(s) 109, 133, 2010, 2854, 2966
TspRI CASTG 5 cut(s) 1275, 2377, 2622, 2862, 2891
Tth111I GACNNNGTC 2 cut(s) 52, 1548
Vha464I CTTAAG 1 cut(s) 395
VpaK11BI GGWCC 1 cut(s) 2392
XapI RAATTY 8 cut(s) 644, 677, 690, 1451, 1850, 2087, 2139, 2184
XbaI TCTAGA 2 cut(s) 871, 3155
XceI RCATGY 2 cut(s) 2053, 2212
XcmI CCANNNNNNNNNTGG 2 cut(s) 743, 3093
XmnI GAANNNNTTC 2 cut(s) 1179, 2267
XspI CTAG 6 cut(s) 272, 833, 872, 1070, 1586, 3156
ZrmI AGTACT 1 cut(s) 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.