Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25780 AT5G27640 AT5G27640 AT5G27640 |
| fragaria_vesca | FvH4_6g00800 |
| malus_domestica | MD04G1241100.v1.1 MD12G1258100.v1.1 |
| prunus_persica | Prupe.6G358600_v2.0.a1 |
| pyrus_communis | pycom04g21280 pycom12g23670 |
| rosa_chinensis | RchiOBHm_Chr3g0448281 |
| rosa_laevigata | RLG00000025930 |
| rosa_multiflora | Rmu_sc0005582.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00426430 |
| rosa_rugosa | Rorug02G0610000 |
| rosa_samantha | Rh3AG009600 Rh3BG009200 Rh3CG009200 Rh3DG009800 |
| rosa_wichuraiana | Rw3G000780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 542 |
| Acc36I | ACCTGC | 1 cut(s) | 1162 |
| AccB1I | GGYRCC | 2 cut(s) | 598, 941 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1729 |
| AccII | CGCG | 2 cut(s) | 727, 826 |
| AciI | CCGC | 3 cut(s) | 824, 1482, 1707 |
| AclWI | GGATC | 5 cut(s) | 110, 287, 1797, 1911, 2106 |
| AcoI | YGGCCR | 3 cut(s) | 1600, 1641, 1662 |
| AcsI | RAATTY | 4 cut(s) | 146, 240, 499, 1610 |
| AcuI | CTGAAG | 3 cut(s) | 588, 1198, 1892 |
| AcyI | GRCGYC | 2 cut(s) | 599, 1813 |
| AfaI | GTAC | 5 cut(s) | 664, 1238, 1568, 1697, 1880 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 688, 1136, 1186, 1548, 1729 |
| AflIII | ACRYGT | 3 cut(s) | 417, 725, 1911 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1457 |
| AhlI | ACTAGT | 1 cut(s) | 760 |
| AjiI | CACGTC | 1 cut(s) | 1912 |
| AjnI | CCWGG | 6 cut(s) | 85, 129, 476, 490, 775, 925 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1724, 1756 |
| Alw21I | GWGCWC | 2 cut(s) | 1304, 1632 |
| AlwI | GGATC | 5 cut(s) | 110, 287, 1797, 1911, 2106 |
| Ama87I | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| AoxI | GGCC | 8 cut(s) | 474, 479, 556, 950, 1524, 1600, 1641, 1662 |
| ApeKI | GCWGC | 2 cut(s) | 29, 695 |
| ApoI | RAATTY | 4 cut(s) | 146, 240, 499, 1610 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 143, 175 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 609, 1211, 1501, 1739, 2124 |
| AspLEI | GCGC | 1 cut(s) | 601 |
| AspS9I | GGNCC | 4 cut(s) | 480, 557, 923, 1681 |
| AsuC2I | CCSGG | 1 cut(s) | 871 |
| AsuHPI | GGTGA | 5 cut(s) | 176, 791, 1451, 1735, 2054 |
| AvaI | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| AvaII | GGWCC | 2 cut(s) | 923, 1681 |
| AxyI | CCTNAGG | 2 cut(s) | 345, 471 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 555, 588 |
| BalI | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| BanI | GGYRCC | 2 cut(s) | 598, 941 |
| BanII | GRGCYC | 2 cut(s) | 1410, 1632 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1289, 1321 |
| BauI | CACGAG | 1 cut(s) | 2018 |
| BbsI | GAAGAC | 2 cut(s) | 99, 1484 |
| Bbv12I | GWGCWC | 2 cut(s) | 1304, 1632 |
| BbvCI | CCTCAGC | 1 cut(s) | 1196 |
| BbvI | GCAGC | 2 cut(s) | 16, 707 |
| BccI | CCATC | 7 cut(s) | 80, 957, 1118, 1358, 1723, 1834, 2033 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2015, 2049 |
| BciT130I | CCWGG | 6 cut(s) | 87, 131, 478, 492, 777, 927 |
| BcnI | CCSGG | 1 cut(s) | 871 |
| BcuI | ACTAGT | 1 cut(s) | 760 |
| BfaI | CTAG | 4 cut(s) | 542, 588, 761, 1169 |
| BfmI | CTRYAG | 1 cut(s) | 1839 |
| BfoI | RGCGCY | 1 cut(s) | 602 |
| BfuAI | ACCTGC | 1 cut(s) | 1162 |
| BisI | GCNGC | 2 cut(s) | 30, 696 |
| BlpI | GCTNAGC | 1 cut(s) | 1001 |
| BlsI | GCNGC | 2 cut(s) | 31, 697 |
| Bme1390I | CCNGG | 7 cut(s) | 87, 131, 478, 492, 777, 871, 927 |
| Bme18I | GGWCC | 2 cut(s) | 923, 1681 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1457 |
| BmeT110I | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| BmgBI | CACGTC | 1 cut(s) | 1912 |
| BmgT120I | GGNCC | 4 cut(s) | 480, 557, 923, 1681 |
| BmiI | GGNNCC | 6 cut(s) | 465, 600, 943, 1407, 1682, 1683 |
| BmrFI | CCNGG | 7 cut(s) | 87, 131, 478, 492, 777, 871, 927 |
| BmsI | GCATC | 3 cut(s) | 10, 273, 820 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1718 |
| BpiI | GAAGAC | 2 cut(s) | 99, 1484 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| Bpu10I | CCTNAGC | 2 cut(s) | 363, 1196 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1001 |
| BpuEI | CTTGAG | 1 cut(s) | 1382 |
| BpuMI | CCSGG | 1 cut(s) | 871 |
| Bsa29I | ATCGAT | 2 cut(s) | 1279, 2106 |
| BsaHI | GRCGYC | 2 cut(s) | 599, 1813 |
| BsaI | GGTCTC | 4 cut(s) | 57, 528, 657, 1101 |
| BsaJI | CCNNGG | 5 cut(s) | 201, 490, 491, 1410, 1665 |
| BsaWI | WCCGGW | 1 cut(s) | 1776 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1724, 1754 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 688, 1136, 1186, 1548, 1729 |
| Bse1I | ACTGG | 7 cut(s) | 139, 160, 250, 1244, 1498, 1693, 1801 |
| Bse21I | CCTNAGG | 2 cut(s) | 345, 471 |
| Bse3DI | GCAATG | 1 cut(s) | 1389 |
| BseBI | CCWGG | 6 cut(s) | 87, 131, 478, 492, 777, 927 |
| BseCI | ATCGAT | 2 cut(s) | 1279, 2106 |
| BseDI | CCNNGG | 5 cut(s) | 201, 490, 491, 1410, 1665 |
| BseGI | GGATG | 7 cut(s) | 72, 139, 288, 882, 1110, 1630, 2044 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 688, 1136, 1186, 1548, 1729 |
| BseMI | GCAATG | 1 cut(s) | 1389 |
| BseMII | CTCAG | 6 cut(s) | 68, 359, 485, 1023, 1187, 2106 |
| BseNI | ACTGG | 7 cut(s) | 139, 160, 250, 1244, 1498, 1693, 1801 |
| BseRI | GAGGAG | 4 cut(s) | 333, 459, 470, 2024 |
| BseXI | GCAGC | 2 cut(s) | 16, 707 |
| BseYI | CCCAGC | 1 cut(s) | 1580 |
| BsgI | GTGCAG | 1 cut(s) | 665 |
| Bsh1236I | CGCG | 2 cut(s) | 727, 826 |
| BshFI | GGCC | 8 cut(s) | 476, 481, 558, 952, 1526, 1602, 1643, 1664 |
| BshNI | GGYRCC | 2 cut(s) | 598, 941 |
| BshVI | ATCGAT | 2 cut(s) | 1279, 2106 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1304, 1632 |
| BsiHKCI | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| BsiSI | CCGG | 2 cut(s) | 870, 1777 |
| BslFI | GGGAC | 2 cut(s) | 473, 1694 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 688, 1136, 1186, 1548, 1729 |
| BsmBI | CGTCTC | 1 cut(s) | 734 |
| BsmFI | GGGAC | 2 cut(s) | 473, 1694 |
| BsmI | GAATGC | 1 cut(s) | 745 |
| BsnI | GGCC | 8 cut(s) | 476, 481, 558, 952, 1526, 1602, 1643, 1664 |
| Bso31I | GGTCTC | 4 cut(s) | 57, 528, 657, 1101 |
| BsoBI | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1304, 1410, 1632 |
| Bsp143I | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1001 |
| BspACI | CCGC | 3 cut(s) | 824, 1482, 1707 |
| BspANI | GGCC | 8 cut(s) | 476, 481, 558, 952, 1526, 1602, 1643, 1664 |
| BspCNI | CTCAG | 6 cut(s) | 67, 358, 484, 1024, 1188, 2107 |
| BspDI | ATCGAT | 2 cut(s) | 1279, 2106 |
| BspFNI | CGCG | 2 cut(s) | 727, 826 |
| BspLI | GGNNCC | 6 cut(s) | 465, 600, 943, 1407, 1682, 1683 |
| BspMAI | CTGCAG | 1 cut(s) | 1843 |
| BspMI | ACCTGC | 1 cut(s) | 1162 |
| BspPI | GGATC | 5 cut(s) | 110, 287, 1797, 1911, 2106 |
| BspQI | GCTCTTC | 1 cut(s) | 1292 |
| BspT107I | GGYRCC | 2 cut(s) | 598, 941 |
| BspTNI | GGTCTC | 4 cut(s) | 57, 528, 657, 1101 |
| BsrDI | GCAATG | 1 cut(s) | 1389 |
| BsrI | ACTGG | 7 cut(s) | 139, 160, 250, 1244, 1498, 1693, 1801 |
| BssECI | CCNNGG | 5 cut(s) | 201, 490, 491, 1410, 1665 |
| BssMI | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| BssNI | GRCGYC | 2 cut(s) | 599, 1813 |
| BssSI | CACGAG | 1 cut(s) | 2018 |
| BssT1I | CCWWGG | 2 cut(s) | 201, 1410 |
| Bst2BI | CACGAG | 1 cut(s) | 2018 |
| Bst2UI | CCWGG | 6 cut(s) | 87, 131, 478, 492, 777, 927 |
| Bst4CI | ACNGT | 2 cut(s) | 279, 323 |
| Bst6I | CTCTTC | 6 cut(s) | 1217, 1292, 1550, 1848, 1940, 2001 |
| BstACI | GRCGYC | 2 cut(s) | 599, 1813 |
| BstC8I | GCNNGC | 2 cut(s) | 1512, 1604 |
| BstDSI | CCRYGG | 1 cut(s) | 1665 |
| BstEII | GGTNACC | 1 cut(s) | 1439 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| BstF5I | GGATG | 7 cut(s) | 72, 139, 288, 882, 1110, 1630, 2044 |
| BstFNI | CGCG | 2 cut(s) | 727, 826 |
| BstH2I | RGCGCY | 1 cut(s) | 602 |
| BstHHI | GCGC | 1 cut(s) | 601 |
| BstKTI | GATC | 8 cut(s) | 105, 184, 295, 1279, 1389, 1792, 1906, 2101 |
| BstMBI | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 29, 359, 511, 598, 733, 742, 1163, 1532 |
| BstNI | CCWGG | 6 cut(s) | 87, 131, 478, 492, 777, 927 |
| BstNSI | RCATGY | 1 cut(s) | 421 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1718 |
| BstPI | GGTNACC | 1 cut(s) | 1439 |
| BstSCI | CCNGG | 7 cut(s) | 85, 129, 476, 490, 775, 869, 925 |
| BstSFI | CTRYAG | 1 cut(s) | 1839 |
| BstUI | CGCG | 2 cut(s) | 727, 826 |
| BstV1I | GCAGC | 2 cut(s) | 16, 707 |
| BstV2I | GAAGAC | 2 cut(s) | 99, 1484 |
| BstX2I | RGATCY | 1 cut(s) | 2098 |
| BstYI | RGATCY | 1 cut(s) | 2098 |
| Bsu15I | ATCGAT | 2 cut(s) | 1279, 2106 |
| Bsu36I | CCTNAGG | 2 cut(s) | 345, 471 |
| BsuRI | GGCC | 8 cut(s) | 476, 481, 558, 952, 1526, 1602, 1643, 1664 |
| BsuTUI | ATCGAT | 2 cut(s) | 1279, 2106 |
| BtgI | CCRYGG | 1 cut(s) | 1665 |
| BtrI | CACGTC | 1 cut(s) | 1912 |
| BtsCI | GGATG | 7 cut(s) | 72, 139, 288, 882, 1110, 1630, 2044 |
| BtsI | GCAGTG | 3 cut(s) | 653, 1716, 1994 |
| BtsIMutI | CAGTG | 7 cut(s) | 153, 653, 1222, 1491, 1716, 1994, 2112 |
| BveI | ACCTGC | 1 cut(s) | 1162 |
| Cac8I | GCNNGC | 2 cut(s) | 1512, 1604 |
| CfoI | GCGC | 1 cut(s) | 601 |
| Cfr13I | GGNCC | 4 cut(s) | 480, 557, 923, 1681 |
| ClaI | ATCGAT | 2 cut(s) | 1279, 2106 |
| CseI | GACGC | 3 cut(s) | 608, 716, 1802 |
| CsiI | ACCWGGT | 1 cut(s) | 925 |
| Csp6I | GTAC | 5 cut(s) | 663, 1237, 1567, 1696, 1879 |
| CviAII | CATG | 9 cut(s) | 377, 418, 733, 1063, 1401, 1436, 1660, 1724, 2003 |
| CviQI | GTAC | 5 cut(s) | 663, 1237, 1567, 1696, 1879 |
| DinI | GGCGCC | 1 cut(s) | 600 |
| DpnI | GATC | 8 cut(s) | 104, 183, 294, 1278, 1388, 1791, 1905, 2100 |
| DpnII | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 542 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1457 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 542 |
| EaeI | YGGCCR | 3 cut(s) | 1600, 1641, 1662 |
| Eam1104I | CTCTTC | 6 cut(s) | 1217, 1292, 1550, 1848, 1940, 2001 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1457 |
| EarI | CTCTTC | 6 cut(s) | 1217, 1292, 1550, 1848, 1940, 2001 |
| Ecl136II | GAGCTC | 1 cut(s) | 1630 |
| Eco130I | CCWWGG | 2 cut(s) | 201, 1410 |
| Eco24I | GRGCYC | 2 cut(s) | 1410, 1632 |
| Eco31I | GGTCTC | 4 cut(s) | 57, 528, 657, 1101 |
| Eco32I | GATATC | 2 cut(s) | 1087, 1672 |
| Eco47I | GGWCC | 2 cut(s) | 923, 1681 |
| Eco53kI | GAGCTC | 1 cut(s) | 1630 |
| Eco57I | CTGAAG | 3 cut(s) | 588, 1198, 1892 |
| Eco81I | CCTNAGG | 2 cut(s) | 345, 471 |
| Eco88I | CYCGRG | 4 cut(s) | 24, 531, 1180, 1631 |
| Eco91I | GGTNACC | 1 cut(s) | 1439 |
| EcoICRI | GAGCTC | 1 cut(s) | 1630 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| EcoO109I | RGGNCCY | 3 cut(s) | 480, 923, 1681 |
| EcoO65I | GGTNACC | 1 cut(s) | 1439 |
| EcoRI | GAATTC | 1 cut(s) | 146 |
| EcoRII | CCWGG | 6 cut(s) | 85, 129, 476, 490, 775, 925 |
| EcoRV | GATATC | 2 cut(s) | 1087, 1672 |
| EcoT14I | CCWWGG | 2 cut(s) | 201, 1410 |
| EcoT38I | GRGCYC | 2 cut(s) | 1410, 1632 |
| EgeI | GGCGCC | 1 cut(s) | 600 |
| EheI | GGCGCC | 1 cut(s) | 600 |
| ErhI | CCWWGG | 2 cut(s) | 201, 1410 |
| Esp3I | CGTCTC | 1 cut(s) | 734 |
| FaeI | CATG | 9 cut(s) | 380, 421, 736, 1066, 1404, 1439, 1663, 1727, 2006 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1196, 1228 |
| FaqI | GGGAC | 2 cut(s) | 473, 1694 |
| FatI | CATG | 9 cut(s) | 376, 417, 732, 1062, 1400, 1435, 1659, 1723, 2002 |
| FauI | CCCGC | 1 cut(s) | 831 |
| FauNDI | CATATG | 1 cut(s) | 1748 |
| Fnu4HI | GCNGC | 2 cut(s) | 30, 696 |
| FokI | GGATG | 7 cut(s) | 59, 146, 295, 889, 1097, 1637, 2051 |
| FriOI | GRGCYC | 2 cut(s) | 1410, 1632 |
| Fsp4HI | GCNGC | 2 cut(s) | 30, 696 |
| FspBI | CTAG | 4 cut(s) | 542, 588, 761, 1169 |
| GlaI | GCGC | 1 cut(s) | 600 |
| GluI | GCNGC | 2 cut(s) | 30, 696 |
| GsaI | CCCAGC | 1 cut(s) | 1584 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| HaeII | RGCGCY | 1 cut(s) | 602 |
| HaeIII | GGCC | 8 cut(s) | 476, 481, 558, 952, 1526, 1602, 1643, 1664 |
| HapII | CCGG | 2 cut(s) | 870, 1777 |
| HgaI | GACGC | 3 cut(s) | 608, 716, 1802 |
| HhaI | GCGC | 1 cut(s) | 601 |
| Hin1I | GRCGYC | 2 cut(s) | 599, 1813 |
| Hin1II | CATG | 9 cut(s) | 380, 421, 736, 1066, 1404, 1439, 1663, 1727, 2006 |
| Hin6I | GCGC | 1 cut(s) | 599 |
| HinP1I | GCGC | 1 cut(s) | 599 |
| HindIII | AAGCTT | 1 cut(s) | 998 |
| HinfI | GANTC | 6 cut(s) | 68, 159, 1106, 1207, 1432, 2132 |
| HpaII | CCGG | 2 cut(s) | 870, 1777 |
| HphI | GGTGA | 5 cut(s) | 176, 791, 1451, 1735, 2054 |
| Hpy166II | GTNNAC | 4 cut(s) | 127, 415, 1743, 1931 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 962 |
| Hpy8I | GTNNAC | 4 cut(s) | 127, 415, 1743, 1931 |
| HpyCH4III | ACNGT | 2 cut(s) | 279, 323 |
| HpyCH4IV | ACGT | 4 cut(s) | 486, 1620, 1698, 1911 |
| HpyCH4V | TGCA | 9 cut(s) | 505, 646, 833, 1230, 1400, 1703, 1841, 1987, 2002 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 29, 359, 511, 598, 733, 742, 1163, 1532 |
| HpySE526I | ACGT | 4 cut(s) | 486, 1620, 1698, 1911 |
| Hsp92I | GRCGYC | 2 cut(s) | 599, 1813 |
| Hsp92II | CATG | 9 cut(s) | 380, 421, 736, 1066, 1404, 1439, 1663, 1727, 2006 |
| HspAI | GCGC | 1 cut(s) | 599 |
| KasI | GGCGCC | 1 cut(s) | 598 |
| KflI | GGGWCCC | 1 cut(s) | 1681 |
| Kzo9I | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| LguI | GCTCTTC | 1 cut(s) | 1292 |
| LmnI | GCTCC | 3 cut(s) | 463, 1192, 1405 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 707 |
| LweI | GCATC | 3 cut(s) | 10, 273, 820 |
| MabI | ACCWGGT | 1 cut(s) | 925 |
| MaeI | CTAG | 4 cut(s) | 542, 588, 761, 1169 |
| MaeII | ACGT | 4 cut(s) | 486, 1620, 1698, 1911 |
| MaeIII | GTNAC | 7 cut(s) | 164, 673, 793, 1415, 1439, 1711, 2110 |
| MalI | GATC | 8 cut(s) | 104, 183, 294, 1278, 1388, 1791, 1905, 2100 |
| MboI | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| MfeI | CAATTG | 1 cut(s) | 915 |
| MflI | RGATCY | 1 cut(s) | 2098 |
| MhlI | GDGCHC | 3 cut(s) | 1304, 1410, 1632 |
| MlsI | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| MluCI | AATT | 7 cut(s) | 61, 146, 240, 499, 915, 1572, 1610 |
| MluI | ACGCGT | 1 cut(s) | 725 |
| MluNI | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| Mly113I | GGCGCC | 1 cut(s) | 599 |
| MmeI | TCCRAC | 2 cut(s) | 100, 369 |
| Mox20I | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| MroXI | GAANNNNTTC | 5 cut(s) | 609, 1211, 1501, 1739, 2124 |
| MscI | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| MseI | TTAA | 4 cut(s) | 60, 264, 849, 1586 |
| MslI | CAYNNNNRTG | 1 cut(s) | 173 |
| Msp20I | TGGCCA | 3 cut(s) | 1602, 1643, 1664 |
| MspA1I | CMGCKG | 2 cut(s) | 698, 1649 |
| MspI | CCGG | 2 cut(s) | 870, 1777 |
| MspR9I | CCNGG | 7 cut(s) | 87, 131, 478, 492, 777, 871, 927 |
| MunI | CAATTG | 1 cut(s) | 915 |
| Mva1269I | GAATGC | 1 cut(s) | 745 |
| MvaI | CCWGG | 6 cut(s) | 87, 131, 478, 492, 777, 927 |
| MvnI | CGCG | 2 cut(s) | 727, 826 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 29, 359, 511, 598, 733, 742, 1163, 1532 |
| NarI | GGCGCC | 1 cut(s) | 599 |
| NciI | CCSGG | 1 cut(s) | 871 |
| NdeI | CATATG | 1 cut(s) | 1748 |
| NdeII | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| NlaIII | CATG | 9 cut(s) | 380, 421, 736, 1066, 1404, 1439, 1663, 1727, 2006 |
| NlaIV | GGNNCC | 6 cut(s) | 465, 600, 943, 1407, 1682, 1683 |
| NmuCI | GTSAC | 5 cut(s) | 673, 1415, 1439, 1711, 2110 |
| NspI | RCATGY | 1 cut(s) | 421 |
| PaeR7I | CTCGAG | 1 cut(s) | 1631 |
| PasI | CCCWGGG | 1 cut(s) | 491 |
| PciI | ACATGT | 1 cut(s) | 417 |
| PciSI | GCTCTTC | 1 cut(s) | 1292 |
| PctI | GAATGC | 1 cut(s) | 745 |
| PdmI | GAANNNNTTC | 5 cut(s) | 609, 1211, 1501, 1739, 2124 |
| PfeI | GAWTC | 5 cut(s) | 68, 159, 1106, 1207, 1432 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1729 |
| PfoI | TCCNGGA | 1 cut(s) | 85 |
| PkrI | GCNGC | 2 cut(s) | 31, 697 |
| PluTI | GGCGCC | 1 cut(s) | 602 |
| PpuMI | RGGWCCY | 2 cut(s) | 923, 1681 |
| PscI | ACATGT | 1 cut(s) | 417 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1718 |
| Psp124BI | GAGCTC | 1 cut(s) | 1632 |
| Psp5II | RGGWCCY | 2 cut(s) | 923, 1681 |
| Psp6I | CCWGG | 6 cut(s) | 85, 129, 476, 490, 775, 925 |
| PspEI | GGTNACC | 1 cut(s) | 1439 |
| PspFI | CCCAGC | 1 cut(s) | 1580 |
| PspGI | CCWGG | 6 cut(s) | 85, 129, 476, 490, 775, 925 |
| PspN4I | GGNNCC | 6 cut(s) | 465, 600, 943, 1407, 1682, 1683 |
| PspPI | GGNCC | 4 cut(s) | 480, 557, 923, 1681 |
| PspPPI | RGGWCCY | 2 cut(s) | 923, 1681 |
| PstI | CTGCAG | 1 cut(s) | 1843 |
| PsuI | RGATCY | 1 cut(s) | 2098 |
| PvuII | CAGCTG | 2 cut(s) | 698, 1649 |
| RsaI | GTAC | 5 cut(s) | 664, 1238, 1568, 1697, 1880 |
| RsaNI | GTAC | 5 cut(s) | 663, 1237, 1567, 1696, 1879 |
| RseI | CAYNNNNRTG | 1 cut(s) | 173 |
| SacI | GAGCTC | 1 cut(s) | 1632 |
| SapI | GCTCTTC | 1 cut(s) | 1292 |
| SaqAI | TTAA | 4 cut(s) | 60, 264, 849, 1586 |
| SatI | GCNGC | 2 cut(s) | 30, 696 |
| Sau3AI | GATC | 8 cut(s) | 102, 181, 292, 1276, 1386, 1789, 1903, 2098 |
| Sau96I | GGNCC | 4 cut(s) | 480, 557, 923, 1681 |
| ScrFI | CCNGG | 7 cut(s) | 87, 131, 478, 492, 777, 871, 927 |
| SduI | GDGCHC | 3 cut(s) | 1304, 1410, 1632 |
| SexAI | ACCWGGT | 1 cut(s) | 925 |
| SfaNI | GCATC | 3 cut(s) | 10, 273, 820 |
| SfcI | CTRYAG | 1 cut(s) | 1839 |
| SfoI | GGCGCC | 1 cut(s) | 600 |
| Sfr274I | CTCGAG | 1 cut(s) | 1631 |
| SinI | GGWCC | 2 cut(s) | 923, 1681 |
| SlaI | CTCGAG | 1 cut(s) | 1631 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 173 |
| SmlI | CTYRAG | 2 cut(s) | 1361, 1631 |
| SmoI | CTYRAG | 2 cut(s) | 1361, 1631 |
| SpeI | ACTAGT | 1 cut(s) | 760 |
| Sse9I | AATT | 7 cut(s) | 61, 146, 240, 499, 915, 1572, 1610 |
| SsiI | CCGC | 3 cut(s) | 824, 1482, 1707 |
| SspDI | GGCGCC | 1 cut(s) | 598 |
| SspMI | CTAG | 4 cut(s) | 542, 588, 761, 1169 |
| SstI | GAGCTC | 1 cut(s) | 1632 |
| StyD4I | CCNGG | 7 cut(s) | 85, 129, 476, 490, 775, 869, 925 |
| StyI | CCWWGG | 2 cut(s) | 201, 1410 |
| TaaI | ACNGT | 2 cut(s) | 279, 323 |
| TaiI | ACGT | 4 cut(s) | 489, 1623, 1701, 1914 |
| TaqI | TCGA | 9 cut(s) | 105, 150, 180, 423, 1279, 1353, 1632, 1674, 2106 |
| TasI | AATT | 7 cut(s) | 61, 146, 240, 499, 915, 1572, 1610 |
| TatI | WGTACW | 3 cut(s) | 1236, 1566, 1878 |
| TfiI | GAWTC | 5 cut(s) | 68, 159, 1106, 1207, 1432 |
| Tru1I | TTAA | 4 cut(s) | 60, 264, 849, 1586 |
| Tru9I | TTAA | 4 cut(s) | 60, 264, 849, 1586 |
| TscAI | CASTG | 7 cut(s) | 160, 653, 1222, 1498, 1716, 1994, 2119 |
| TseFI | GTSAC | 5 cut(s) | 673, 1415, 1439, 1711, 2110 |
| TseI | GCWGC | 2 cut(s) | 29, 695 |
| Tsp45I | GTSAC | 5 cut(s) | 673, 1415, 1439, 1711, 2110 |
| TspGWI | ACGGA | 2 cut(s) | 1316, 1682 |
| TspRI | CASTG | 7 cut(s) | 160, 653, 1222, 1498, 1716, 1994, 2119 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1729 |
| VpaK11BI | GGWCC | 2 cut(s) | 923, 1681 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1134 |
| XapI | RAATTY | 4 cut(s) | 146, 240, 499, 1610 |
| XceI | RCATGY | 1 cut(s) | 421 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 83, 310 |
| XhoI | CTCGAG | 1 cut(s) | 1631 |
| XmnI | GAANNNNTTC | 5 cut(s) | 609, 1211, 1501, 1739, 2124 |
| XspI | CTAG | 4 cut(s) | 542, 588, 761, 1169 |