Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25780 AT5G27640 AT5G27640 AT5G27640 |
| fragaria_vesca | FvH4_6g00800 |
| malus_domestica | MD04G1241100.v1.1 MD12G1258100.v1.1 |
| prunus_persica | Prupe.6G358600_v2.0.a1 |
| pyrus_communis | pycom04g21280 pycom12g23670 |
| rosa_chinensis | RchiOBHm_Chr3g0448281 |
| rosa_laevigata | RLG00000025930 |
| rosa_multiflora | Rmu_sc0005582.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00426430 |
| rosa_rugosa | Rorug02G0610000 |
| rosa_samantha | Rh3AG009600 Rh3BG009200 Rh3CG009200 Rh3DG009800 |
| rosa_wichuraiana | Rw3G000780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 554 |
| AatII | GACGTC | 1 cut(s) | 12 |
| AccB1I | GGYRCC | 3 cut(s) | 603, 722, 1842 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1759 |
| AccBSI | CCGCTC | 1 cut(s) | 1351 |
| AccI | GTMKAC | 2 cut(s) | 497, 1062 |
| AccII | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| AciI | CCGC | 8 cut(s) | 5, 41, 88, 1194, 1351, 1439, 1610, 1677 |
| AclI | AACGTT | 2 cut(s) | 240, 1089 |
| AclWI | GGATC | 7 cut(s) | 411, 1112, 1117, 1706, 1719, 1827, 1974 |
| AcoI | YGGCCR | 3 cut(s) | 684, 1525, 1671 |
| AcuI | CTGAAG | 3 cut(s) | 600, 629, 1084 |
| AcyI | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| AdeI | CACNNNGTG | 1 cut(s) | 791 |
| AfaI | GTAC | 4 cut(s) | 20, 1001, 1250, 1910 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 381, 471, 672, 1148, 1198, 1759, 2143 |
| AflIII | ACRYGT | 1 cut(s) | 429 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1069 |
| AjnI | CCWGG | 7 cut(s) | 502, 542, 681, 762, 787, 1935, 2136 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 543, 575 |
| AleI | CACNNNNGTG | 1 cut(s) | 581 |
| Alw21I | GWGCWC | 1 cut(s) | 1516 |
| Alw26I | GTCTC | 1 cut(s) | 1040 |
| AlwI | GGATC | 7 cut(s) | 411, 1112, 1117, 1706, 1719, 1827, 1974 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 578 |
| Ama87I | CYCGRG | 1 cut(s) | 1846 |
| ApaI | GGGCCC | 1 cut(s) | 478 |
| ApeKI | GCWGC | 3 cut(s) | 67, 816, 1633 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 155, 187, 986, 1018 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 513, 1223, 1769 |
| AspLEI | GCGC | 4 cut(s) | 725, 1132, 1596, 1845 |
| AsuC2I | CCSGG | 3 cut(s) | 203, 982, 1591 |
| AsuHPI | GGTGA | 7 cut(s) | 777, 803, 817, 1101, 1186, 1575, 2140 |
| AsuII | TTCGAA | 2 cut(s) | 1535, 2160 |
| AvaI | CYCGRG | 1 cut(s) | 1846 |
| AvaII | GGWCC | 4 cut(s) | 547, 663, 879, 1933 |
| AxyI | CCTNAGG | 2 cut(s) | 357, 1422 |
| BaeGI | GKGCMC | 1 cut(s) | 478 |
| BalI | TGGCCA | 2 cut(s) | 686, 1673 |
| BamHI | GGATCC | 1 cut(s) | 1711 |
| BanI | GGYRCC | 3 cut(s) | 603, 722, 1842 |
| BanII | GRGCYC | 1 cut(s) | 478 |
| BauI | CACGAG | 1 cut(s) | 837 |
| BbsI | GAAGAC | 2 cut(s) | 111, 444 |
| Bbv12I | GWGCWC | 1 cut(s) | 1516 |
| BbvCI | CCTCAGC | 1 cut(s) | 1929 |
| BbvI | GCAGC | 3 cut(s) | 79, 828, 1645 |
| BccI | CCATC | 2 cut(s) | 1753, 1864 |
| BceAI | ACGGC | 3 cut(s) | 54, 1512, 1783 |
| BciT130I | CCWGG | 7 cut(s) | 504, 544, 683, 764, 789, 1937, 2138 |
| BciVI | GTATCC | 1 cut(s) | 386 |
| BclI | TGATCA | 1 cut(s) | 273 |
| BcnI | CCSGG | 3 cut(s) | 203, 982, 1591 |
| BcoDI | GTCTC | 1 cut(s) | 1040 |
| BfaI | CTAG | 3 cut(s) | 671, 1274, 1637 |
| BfmI | CTRYAG | 2 cut(s) | 256, 1737 |
| BfoI | RGCGCY | 3 cut(s) | 726, 1597, 1846 |
| BfuI | GTATCC | 1 cut(s) | 386 |
| BisI | GCNGC | 4 cut(s) | 42, 68, 817, 1634 |
| BlpI | GCTNAGC | 1 cut(s) | 366 |
| BlsI | GCNGC | 4 cut(s) | 43, 69, 818, 1635 |
| BmcAI | AGTACT | 1 cut(s) | 1001 |
| Bme18I | GGWCC | 4 cut(s) | 547, 663, 879, 1933 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1069 |
| BmeT110I | CYCGRG | 1 cut(s) | 1846 |
| BmiI | GGNNCC | 9 cut(s) | 476, 477, 548, 605, 665, 724, 1419, 1713, 1844 |
| BmrI | ACTGGG | 2 cut(s) | 710, 1157 |
| BmsI | GCATC | 4 cut(s) | 285, 586, 735, 832 |
| BmuI | ACTGGG | 2 cut(s) | 710, 1157 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1748 |
| BpiI | GAAGAC | 2 cut(s) | 111, 444 |
| BpmI | CTGGAG | 3 cut(s) | 486, 951, 960 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1197, 1929 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 366 |
| Bpu14I | TTCGAA | 2 cut(s) | 1535, 2160 |
| BpuEI | CTTGAG | 2 cut(s) | 362, 1975 |
| BpuMI | CCSGG | 3 cut(s) | 203, 982, 1591 |
| Bsa29I | ATCGAT | 1 cut(s) | 406 |
| BsaAI | YACGTR | 1 cut(s) | 1729 |
| BsaHI | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| BsaJI | CCNNGG | 8 cut(s) | 324, 503, 543, 762, 981, 1478, 1668, 1847 |
| BsaWI | WCCGGW | 1 cut(s) | 881 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 381, 471, 672, 1148, 1198, 1759, 2143 |
| Bse21I | CCTNAGG | 2 cut(s) | 357, 1422 |
| Bse3DI | GCAATG | 1 cut(s) | 1859 |
| BseBI | CCWGG | 7 cut(s) | 504, 544, 683, 764, 789, 1937, 2138 |
| BseCI | ATCGAT | 1 cut(s) | 406 |
| BseDI | CCNNGG | 8 cut(s) | 324, 503, 543, 762, 981, 1478, 1668, 1847 |
| BseGI | GGATG | 2 cut(s) | 300, 1945 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 381, 471, 672, 1148, 1198, 1759, 2143 |
| BseMI | GCAATG | 1 cut(s) | 1859 |
| BseMII | CTCAG | 6 cut(s) | 357, 371, 636, 1761, 1863, 1920 |
| BseRI | GAGGAG | 7 cut(s) | 345, 948, 1217, 1895, 1898, 2108, 2159 |
| BseSI | GKGCMC | 1 cut(s) | 478 |
| BseXI | GCAGC | 3 cut(s) | 79, 828, 1645 |
| BseYI | CCCAGC | 1 cut(s) | 950 |
| BsgI | GTGCAG | 2 cut(s) | 591, 677 |
| Bsh1236I | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| BshNI | GGYRCC | 3 cut(s) | 603, 722, 1842 |
| BshVI | ATCGAT | 1 cut(s) | 406 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1516 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1846 |
| BsiSI | CCGG | 5 cut(s) | 99, 203, 882, 981, 1590 |
| BslFI | GGGAC | 5 cut(s) | 560, 649, 688, 1367, 2081 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 381, 471, 672, 1148, 1198, 1759, 2143 |
| BsmAI | GTCTC | 1 cut(s) | 1040 |
| BsmFI | GGGAC | 5 cut(s) | 560, 649, 688, 1367, 2081 |
| BsmI | GAATGC | 1 cut(s) | 1406 |
| BsoBI | CYCGRG | 1 cut(s) | 1846 |
| Bsp119I | TTCGAA | 2 cut(s) | 1535, 2160 |
| Bsp120I | GGGCCC | 1 cut(s) | 474 |
| Bsp1286I | GDGCHC | 2 cut(s) | 478, 1516 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 366 |
| Bsp19I | CCATGG | 1 cut(s) | 1668 |
| Bsp68I | TCGCGA | 1 cut(s) | 1971 |
| BspACI | CCGC | 8 cut(s) | 5, 41, 88, 1194, 1351, 1439, 1610, 1677 |
| BspCNI | CTCAG | 6 cut(s) | 358, 370, 637, 1760, 1864, 1921 |
| BspDI | ATCGAT | 1 cut(s) | 406 |
| BspFNI | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| BspHI | TCATGA | 1 cut(s) | 453 |
| BspLI | GGNNCC | 9 cut(s) | 476, 477, 548, 605, 665, 724, 1419, 1713, 1844 |
| BspMAI | CTGCAG | 1 cut(s) | 1741 |
| BspPI | GGATC | 7 cut(s) | 411, 1112, 1117, 1706, 1719, 1827, 1974 |
| BspT104I | TTCGAA | 2 cut(s) | 1535, 2160 |
| BspT107I | GGYRCC | 3 cut(s) | 603, 722, 1842 |
| BsrBI | CCGCTC | 1 cut(s) | 1351 |
| BsrDI | GCAATG | 1 cut(s) | 1859 |
| BssECI | CCNNGG | 8 cut(s) | 324, 503, 543, 762, 981, 1478, 1668, 1847 |
| BssNAI | GTATAC | 1 cut(s) | 498 |
| BssNI | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| BssSI | CACGAG | 1 cut(s) | 837 |
| BssT1I | CCWWGG | 3 cut(s) | 324, 1478, 1668 |
| Bst1107I | GTATAC | 1 cut(s) | 498 |
| Bst2BI | CACGAG | 1 cut(s) | 837 |
| Bst2UI | CCWGG | 7 cut(s) | 504, 544, 683, 764, 789, 1937, 2138 |
| Bst4CI | ACNGT | 4 cut(s) | 260, 495, 621, 691 |
| Bst6I | CTCTTC | 4 cut(s) | 1970, 2034, 2085, 2118 |
| BstACI | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| BstBAI | YACGTR | 1 cut(s) | 1729 |
| BstBI | TTCGAA | 2 cut(s) | 1535, 2160 |
| BstC8I | GCNNGC | 5 cut(s) | 372, 1167, 1563, 1796, 1961 |
| BstDEI | CTNAG | 9 cut(s) | 357, 366, 645, 1197, 1422, 1747, 1872, 1929, 2063 |
| BstDSI | CCRYGG | 1 cut(s) | 1668 |
| BstEII | GGTNACC | 2 cut(s) | 1107, 1581 |
| BstF5I | GGATG | 2 cut(s) | 300, 1945 |
| BstFNI | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| BstH2I | RGCGCY | 3 cut(s) | 726, 1597, 1846 |
| BstHHI | GCGC | 4 cut(s) | 725, 1132, 1596, 1845 |
| BstMAI | GTCTC | 1 cut(s) | 1040 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 371, 610, 1849 |
| BstNI | CCWGG | 7 cut(s) | 504, 544, 683, 764, 789, 1937, 2138 |
| BstNSI | RCATGY | 1 cut(s) | 433 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1748 |
| BstPI | GGTNACC | 2 cut(s) | 1107, 1581 |
| BstSFI | CTRYAG | 2 cut(s) | 256, 1737 |
| BstSLI | GKGCMC | 1 cut(s) | 478 |
| BstSNI | TACGTA | 1 cut(s) | 1729 |
| BstUI | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| BstV1I | GCAGC | 3 cut(s) | 79, 828, 1645 |
| BstV2I | GAAGAC | 2 cut(s) | 111, 444 |
| BstX2I | RGATCY | 1 cut(s) | 1711 |
| BstYI | RGATCY | 1 cut(s) | 1711 |
| BstZ17I | GTATAC | 1 cut(s) | 498 |
| Bsu15I | ATCGAT | 1 cut(s) | 406 |
| Bsu36I | CCTNAGG | 2 cut(s) | 357, 1422 |
| BsuI | GTATCC | 1 cut(s) | 386 |
| BsuTUI | ATCGAT | 1 cut(s) | 406 |
| BtgI | CCRYGG | 1 cut(s) | 1668 |
| BtsCI | GGATG | 2 cut(s) | 300, 1945 |
| BtsI | GCAGTG | 2 cut(s) | 665, 1746 |
| BtsIMutI | CAGTG | 7 cut(s) | 576, 665, 687, 1234, 1320, 1746, 2017 |
| BtuMI | TCGCGA | 1 cut(s) | 1971 |
| Cac8I | GCNNGC | 5 cut(s) | 372, 1167, 1563, 1796, 1961 |
| CaiI | CAGNNNCTG | 1 cut(s) | 578 |
| CciI | TCATGA | 1 cut(s) | 453 |
| CfoI | GCGC | 4 cut(s) | 725, 1132, 1596, 1845 |
| ClaI | ATCGAT | 1 cut(s) | 406 |
| CseI | GACGC | 1 cut(s) | 173 |
| CsiI | ACCWGGT | 2 cut(s) | 787, 2136 |
| Csp6I | GTAC | 4 cut(s) | 19, 1000, 1249, 1909 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1062, 1097, 1842, 1877 |
| CviQI | GTAC | 4 cut(s) | 19, 1000, 1249, 1909 |
| DdeI | CTNAG | 9 cut(s) | 357, 366, 645, 1197, 1422, 1747, 1872, 1929, 2063 |
| DinI | GGCGCC | 2 cut(s) | 724, 1844 |
| DraI | TTTAAA | 1 cut(s) | 904 |
| DraIII | CACNNNGTG | 1 cut(s) | 791 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 554 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1069 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 554 |
| EaeI | YGGCCR | 3 cut(s) | 684, 1525, 1671 |
| Eam1104I | CTCTTC | 4 cut(s) | 1970, 2034, 2085, 2118 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1069 |
| EarI | CTCTTC | 4 cut(s) | 1970, 2034, 2085, 2118 |
| EciI | GGCGGA | 2 cut(s) | 20, 77 |
| Eco105I | TACGTA | 1 cut(s) | 1729 |
| Eco130I | CCWWGG | 3 cut(s) | 324, 1478, 1668 |
| Eco24I | GRGCYC | 1 cut(s) | 478 |
| Eco47I | GGWCC | 4 cut(s) | 547, 663, 879, 1933 |
| Eco57I | CTGAAG | 3 cut(s) | 600, 629, 1084 |
| Eco81I | CCTNAGG | 2 cut(s) | 357, 1422 |
| Eco88I | CYCGRG | 1 cut(s) | 1846 |
| Eco91I | GGTNACC | 2 cut(s) | 1107, 1581 |
| EcoO109I | RGGNCCY | 1 cut(s) | 475 |
| EcoO65I | GGTNACC | 2 cut(s) | 1107, 1581 |
| EcoRII | CCWGG | 7 cut(s) | 502, 542, 681, 762, 787, 1935, 2136 |
| EcoT14I | CCWWGG | 3 cut(s) | 324, 1478, 1668 |
| EcoT38I | GRGCYC | 1 cut(s) | 478 |
| EgeI | GGCGCC | 2 cut(s) | 724, 1844 |
| EheI | GGCGCC | 2 cut(s) | 724, 1844 |
| ErhI | CCWWGG | 3 cut(s) | 324, 1478, 1668 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 354, 386 |
| FaqI | GGGAC | 5 cut(s) | 560, 649, 688, 1367, 2081 |
| FauI | CCCGC | 3 cut(s) | 1201, 1344, 1603 |
| FbaI | TGATCA | 1 cut(s) | 273 |
| FblI | GTMKAC | 2 cut(s) | 497, 1062 |
| Fnu4HI | GCNGC | 4 cut(s) | 42, 68, 817, 1634 |
| FokI | GGATG | 2 cut(s) | 307, 1952 |
| FriOI | GRGCYC | 1 cut(s) | 478 |
| Fsp4HI | GCNGC | 4 cut(s) | 42, 68, 817, 1634 |
| FspBI | CTAG | 3 cut(s) | 671, 1274, 1637 |
| GlaI | GCGC | 4 cut(s) | 724, 1131, 1595, 1844 |
| GluI | GCNGC | 4 cut(s) | 42, 68, 817, 1634 |
| GsaI | CCCAGC | 1 cut(s) | 954 |
| GsuI | CTGGAG | 3 cut(s) | 486, 951, 960 |
| HaeII | RGCGCY | 3 cut(s) | 726, 1597, 1846 |
| HapII | CCGG | 5 cut(s) | 99, 203, 882, 981, 1590 |
| HgaI | GACGC | 1 cut(s) | 173 |
| HhaI | GCGC | 4 cut(s) | 725, 1132, 1596, 1845 |
| Hin1I | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| Hin6I | GCGC | 4 cut(s) | 723, 1130, 1594, 1843 |
| HinP1I | GCGC | 4 cut(s) | 723, 1130, 1594, 1843 |
| HincII | GTYRAC | 1 cut(s) | 427 |
| HindII | GTYRAC | 1 cut(s) | 427 |
| HinfI | GANTC | 8 cut(s) | 48, 54, 80, 385, 1177, 1219, 1341, 1867 |
| HpaII | CCGG | 5 cut(s) | 99, 203, 882, 981, 1590 |
| HphI | GGTGA | 7 cut(s) | 777, 803, 817, 1101, 1186, 1575, 2140 |
| Hpy166II | GTNNAC | 6 cut(s) | 148, 427, 491, 498, 694, 1063 |
| Hpy188I | TCNGA | 8 cut(s) | 53, 157, 264, 744, 1122, 1340, 1716, 1809 |
| Hpy8I | GTNNAC | 6 cut(s) | 148, 427, 491, 498, 694, 1063 |
| Hpy99I | CGWCG | 1 cut(s) | 40 |
| HpyAV | CCTTC | 4 cut(s) | 105, 524, 1072, 1984 |
| HpyCH4III | ACNGT | 4 cut(s) | 260, 495, 621, 691 |
| HpyCH4IV | ACGT | 5 cut(s) | 9, 240, 731, 1089, 1728 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 371, 610, 1849 |
| HpyF3I | CTNAG | 9 cut(s) | 357, 366, 645, 1197, 1422, 1747, 1872, 1929, 2063 |
| HpySE526I | ACGT | 5 cut(s) | 9, 240, 731, 1089, 1728 |
| Hsp92I | GRCGYC | 3 cut(s) | 9, 723, 1843 |
| HspAI | GCGC | 4 cut(s) | 723, 1130, 1594, 1843 |
| KasI | GGCGCC | 2 cut(s) | 722, 1842 |
| Ksp22I | TGATCA | 1 cut(s) | 273 |
| LmnI | GCTCC | 3 cut(s) | 935, 1348, 1417 |
| Lsp1109I | GCAGC | 3 cut(s) | 79, 828, 1645 |
| LweI | GCATC | 4 cut(s) | 285, 586, 735, 832 |
| MabI | ACCWGGT | 2 cut(s) | 787, 2136 |
| MaeI | CTAG | 3 cut(s) | 671, 1274, 1637 |
| MaeII | ACGT | 5 cut(s) | 9, 240, 731, 1089, 1728 |
| MaeIII | GTNAC | 5 cut(s) | 122, 805, 1107, 1581, 1741 |
| MbiI | CCGCTC | 1 cut(s) | 1351 |
| MflI | RGATCY | 1 cut(s) | 1711 |
| MhlI | GDGCHC | 2 cut(s) | 478, 1516 |
| MlsI | TGGCCA | 2 cut(s) | 686, 1673 |
| MluCI | AATT | 5 cut(s) | 151, 183, 1376, 1398, 1443 |
| MluNI | TGGCCA | 2 cut(s) | 686, 1673 |
| Mly113I | GGCGCC | 2 cut(s) | 723, 1843 |
| MlyI | GAGTC | 3 cut(s) | 379, 1186, 1861 |
| MmeI | TCCRAC | 2 cut(s) | 141, 1739 |
| Mox20I | TGGCCA | 2 cut(s) | 686, 1673 |
| MroXI | GAANNNNTTC | 3 cut(s) | 513, 1223, 1769 |
| MscI | TGGCCA | 2 cut(s) | 686, 1673 |
| MseI | TTAA | 3 cut(s) | 348, 903, 1626 |
| MslI | CAYNNNNRTG | 1 cut(s) | 581 |
| Msp20I | TGGCCA | 2 cut(s) | 686, 1673 |
| MspA1I | CMGCKG | 1 cut(s) | 1679 |
| MspI | CCGG | 5 cut(s) | 99, 203, 882, 981, 1590 |
| Mva1269I | GAATGC | 1 cut(s) | 1406 |
| MvaI | CCWGG | 7 cut(s) | 504, 544, 683, 764, 789, 1937, 2138 |
| MvnI | CGCG | 3 cut(s) | 1439, 1466, 1971 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 371, 610, 1849 |
| NarI | GGCGCC | 2 cut(s) | 723, 1843 |
| NciI | CCSGG | 3 cut(s) | 203, 982, 1591 |
| NcoI | CCATGG | 1 cut(s) | 1668 |
| NlaIV | GGNNCC | 9 cut(s) | 476, 477, 548, 605, 665, 724, 1419, 1713, 1844 |
| NmuCI | GTSAC | 5 cut(s) | 122, 805, 1107, 1581, 1741 |
| NruI | TCGCGA | 1 cut(s) | 1971 |
| NspI | RCATGY | 1 cut(s) | 433 |
| NspV | TTCGAA | 2 cut(s) | 1535, 2160 |
| OliI | CACNNNNGTG | 1 cut(s) | 581 |
| PagI | TCATGA | 1 cut(s) | 453 |
| PciI | ACATGT | 1 cut(s) | 429 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 745, 2157 |
| PctI | GAATGC | 1 cut(s) | 1406 |
| PdmI | GAANNNNTTC | 3 cut(s) | 513, 1223, 1769 |
| PfeI | GAWTC | 5 cut(s) | 48, 54, 80, 1219, 1341 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1759 |
| PkrI | GCNGC | 4 cut(s) | 43, 69, 818, 1635 |
| PleI | GAGTC | 3 cut(s) | 379, 1185, 1861 |
| PluTI | GGCGCC | 2 cut(s) | 726, 1846 |
| PpsI | GAGTC | 3 cut(s) | 379, 1185, 1861 |
| Ppu21I | YACGTR | 1 cut(s) | 1729 |
| PscI | ACATGT | 1 cut(s) | 429 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1748 |
| Psp1406I | AACGTT | 2 cut(s) | 240, 1089 |
| Psp6I | CCWGG | 7 cut(s) | 502, 542, 681, 762, 787, 1935, 2136 |
| PspEI | GGTNACC | 2 cut(s) | 1107, 1581 |
| PspFI | CCCAGC | 1 cut(s) | 950 |
| PspGI | CCWGG | 7 cut(s) | 502, 542, 681, 762, 787, 1935, 2136 |
| PspN4I | GGNNCC | 9 cut(s) | 476, 477, 548, 605, 665, 724, 1419, 1713, 1844 |
| PspOMI | GGGCCC | 1 cut(s) | 474 |
| PstI | CTGCAG | 1 cut(s) | 1741 |
| PstNI | CAGNNNCTG | 1 cut(s) | 578 |
| PsuI | RGATCY | 1 cut(s) | 1711 |
| RruI | TCGCGA | 1 cut(s) | 1971 |
| RsaI | GTAC | 4 cut(s) | 20, 1001, 1250, 1910 |
| RsaNI | GTAC | 4 cut(s) | 19, 1000, 1249, 1909 |
| RseI | CAYNNNNRTG | 1 cut(s) | 581 |
| SaqAI | TTAA | 3 cut(s) | 348, 903, 1626 |
| SatI | GCNGC | 4 cut(s) | 42, 68, 817, 1634 |
| ScaI | AGTACT | 1 cut(s) | 1001 |
| SchI | GAGTC | 3 cut(s) | 379, 1186, 1861 |
| SduI | GDGCHC | 2 cut(s) | 478, 1516 |
| SexAI | ACCWGGT | 2 cut(s) | 787, 2136 |
| SfaNI | GCATC | 4 cut(s) | 285, 586, 735, 832 |
| SfcI | CTRYAG | 2 cut(s) | 256, 1737 |
| SfoI | GGCGCC | 2 cut(s) | 724, 1844 |
| SfuI | TTCGAA | 2 cut(s) | 1535, 2160 |
| SinI | GGWCC | 4 cut(s) | 547, 663, 879, 1933 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 581 |
| SmlI | CTYRAG | 2 cut(s) | 341, 1954 |
| SmoI | CTYRAG | 2 cut(s) | 341, 1954 |
| SnaBI | TACGTA | 1 cut(s) | 1729 |
| Sse9I | AATT | 5 cut(s) | 151, 183, 1376, 1398, 1443 |
| SsiI | CCGC | 8 cut(s) | 5, 41, 88, 1194, 1351, 1439, 1610, 1677 |
| SspDI | GGCGCC | 2 cut(s) | 722, 1842 |
| SspMI | CTAG | 3 cut(s) | 671, 1274, 1637 |
| StyI | CCWWGG | 3 cut(s) | 324, 1478, 1668 |
| TaaI | ACNGT | 4 cut(s) | 260, 495, 621, 691 |
| TaiI | ACGT | 5 cut(s) | 12, 243, 734, 1092, 1731 |
| TasI | AATT | 5 cut(s) | 151, 183, 1376, 1398, 1443 |
| TatI | WGTACW | 3 cut(s) | 999, 1248, 1908 |
| TauI | GCSGC | 1 cut(s) | 44 |
| TfiI | GAWTC | 5 cut(s) | 48, 54, 80, 1219, 1341 |
| Tru1I | TTAA | 3 cut(s) | 348, 903, 1626 |
| Tru9I | TTAA | 3 cut(s) | 348, 903, 1626 |
| TscAI | CASTG | 7 cut(s) | 583, 665, 694, 1234, 1327, 1746, 2024 |
| TseFI | GTSAC | 5 cut(s) | 122, 805, 1107, 1581, 1741 |
| TseI | GCWGC | 3 cut(s) | 67, 816, 1633 |
| Tsp45I | GTSAC | 5 cut(s) | 122, 805, 1107, 1581, 1741 |
| TspDTI | ATGAA | 9 cut(s) | 442, 470, 837, 1053, 1091, 1436, 1588, 1678, 2049 |
| TspGWI | ACGGA | 2 cut(s) | 1058, 2085 |
| TspRI | CASTG | 7 cut(s) | 583, 665, 694, 1234, 1327, 1746, 2024 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1759 |
| VpaK11BI | GGWCC | 4 cut(s) | 547, 663, 879, 1933 |
| XceI | RCATGY | 1 cut(s) | 433 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 322, 550 |
| XmiI | GTMKAC | 2 cut(s) | 497, 1062 |
| XmnI | GAANNNNTTC | 3 cut(s) | 513, 1223, 1769 |
| XspI | CTAG | 3 cut(s) | 671, 1274, 1637 |
| ZraI | GACGTC | 1 cut(s) | 10 |
| ZrmI | AGTACT | 1 cut(s) | 1001 |