Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013505

Physical Location & Seq

Genomic Coordinates Reverse (-)

16000712 .. 16003072

Gene Structure 2361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G39980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGTACATAGAAATTGCTTCATCTTCTTCACTTTCTCTTCCATTATTACCCTTAACCAGACCTCATATCTACACTTCGATACCCTTCTCCACCATTCCTGAAGCTAGACAACGCAATCTCATCTTCACAGTCTCTGCTTCTTCTTCTTCAGAATCCACACAAAACAAAAAGGTATGGAGAAAACAACCGGAGAAGAACACTACGTCGTCGTTTCAGGCCTTAAGGAAACATCGGAGGTATCAAAGATCTGCTTTTCTCGACCACAACGTCGATATGGACGAGCTTTTAGCTTCAATTCACCAGACCCAGAACGAAAAAGAGCTTTTTTCTTTGCTTTCAACTTACAAAGACAGACAATTATCTATACGGTTCATGGTCTCTCTTCTTTCTCGAGAAAATGATTGGCAGAGATCATTGGCATTGCTCGATTGGGTTCATGAGGAAGCCAAATACACACCTTCTGTGTTCGCCTACAATGTTGTTCTTCGAAATGTGTTGAGAGCTAAGCAGTTTGATATTGCACACGGACTGTTCGACGAAATGCGTCAGAGAGCTCTTGCCCCTGATAGGTATACTTATTCAACGCTAATTACCTCGTTTGGTAAAGAGGGTATGTTTGATTCTGCTTTGTCTTGGCTTCAAAAGATGGAACAAGACCGTGTTTCTGGTGACCTTGTTTTGTATAGCAACCTCATTGAGCTTTCTAGGAGGCTGTGTGATTACTCTAAGGCTATCTCGATTTTCTCGAGGTTGAAGAGGTCTGGTATTACGCCTGATCTTGTTGCGTATAATTCGATGATCAATGTTTATGGAAAGGCCAAATTGTTTAGAGAGGCGCGGTTGCTTATAAAGGAGATGAATGAAGCTGGTGTCTTACCAAATACAGTTAGTTACTCTACTCTTTTGAGTGTTTATGTAGAGAATCACAAGTTTTTAGAAGCTTTATCGGTTTTCGCAGAGATGAAAGAGGTGAATTGTGCGTTGGATCTCACGACTTGTAATATAATGATTGATGTTTATGGTCAGCTTGACATGGTTAAAGAAGCTGATAGGTTGTTTTGGAGTTTGAGGAAAATGGATATTGAACCTAATGTTGTTAGCTACAATACTATCCTTCGTGTTTACGGTGAGGCTGAGCTTTTCGGTGAAGCGATTCATCTTTTCAGGTTGATGCAGAGGAAAGACATTGAACAGAACGTTGTTACTTACAATACGATGATTAAGATCTATGGGAAAACTATGGAGCACGAAAAGGCCACGAATCTTGTTCAAGAGATGCAGAGCCGAGGAATTGAACCTAATGCCATTACCTACTCAACTATTATATCAATATGGGGAAAAGCTGGGAAATTGGACCGAGCTGCGACACTGTTTCAGAAGCTGAGGAGCTCTGGTGTGGAAATCGATCAAGTTCTGTATCAAACCATGATTGTGGCTTATGAAAGAGTTGGTCTAATGGGTCATGCTAAACGTCTGCTTCACGAGTTAAAGCTCCCGGATAATATTCCTCGGGAAACCGCTATCACCATTCTGGCTAAAGCTGGGAGAACGGAAGAGGCGACATGGGTTTTTCGTCAAGCCTTTGAATCCGGGGAGGTAAAAGACATATCAGTATTTGGCTGTATGATCAATCTTTACTCAAGAAACCAAAGATACGTAAATGTCATCGAAGTGTTTGAGAAAATGAGAACCGCTGGTTACTTTCCGGATTCGAATGTGATAGCTATGGTGTTGAACGCGTACGGGAAACAAAGAGAGTTTGAAAAAGCAGACACGGTTTACAGAGAAATGCAAGAGGAAGGATGTGTTTTCCCTGATGAAGTTCATTTCCAAATGCTGAGTTTATACTCATCGAAGAAAGATTTTGAGATGGTTGAGTCGTTGTTTCAGAGATTAGAATCTGATCCTAATGTCAATAGCAAGGAGTTGCATTTGGTTGTGGCGGCTTTGTATGAGAGAGCAGATAAACTAAACGATGCTTCAAGAGTCATGAATCGGATGAGAGAACGAGGAATCTTAAAGCCATTTCCTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0031967 GO:0031975 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

678

Amino Acids

78.27

Weight (kDa)

8.29

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	153 - 201	1.1e-12	PPR repeat family
PPR_1	PF12854	186 - 217	4.7e-06	PPR repeat
PPR	PF01535	191 - 220	3.5e-06	PPR repeat
PPR_3	PF13812	213 - 272	1.3e-09	Pentatricopeptide repeat domain
PPR_long	PF17177	243 - 337	1.8e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	258 - 305	9.9e-12	PPR repeat family
PPR	PF01535	261 - 291	7.5e-07	PPR repeat
PPR_3	PF13812	282 - 342	5.5e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	293 - 340	3.9e-11	PPR repeat family
PPR_2	PF13041	329 - 373	3.8e-08	PPR repeat family
PPR_long	PF17177	332 - 514	7.8e-12	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	363 - 408	7e-12	PPR repeat family
TPR_24	PF23276	384 - 489	1.6e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	387 - 447	8.7e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	399 - 443	2.6e-14	PPR repeat family
PPR	PF01535	401 - 431	1.3e-06	PPR repeat
PPR_1	PF12854	429 - 460	2e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013505)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39980
fragaria_vesca	FvH4_6g49520
malus_domestica	MD09G1044200.v1.1
prunus_persica	Prupe.3G273600_v2.0.a1
pyrus_communis	pycom111g03450
rosa_chinensis	RchiOBHm_Chr2g0169431
rosa_laevigata	RLG00000021863
rosa_multiflora	Rmu_co8342305.1_g000001 Rmu_sc0004665.1_g000014 Rmu_sc0004665.1_g000015 Rmu_sc0006806.1_g000040
rosa_roxburghii	Rroxscaffold_2G00082130 Rroxscaffold_3G00240790
rosa_samantha	Rh2AG611300 Rh2BG624900 Rh2CG593300 Rh2DG635500
rosa_wichuraiana	Rw2G050730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	848
AasI	GACNNNNNNGTC	1 cut(s)	266
AccB7I	CCANNNNNTGG	1 cut(s)	2030
AccI	GTMKAC	1 cut(s)	572
AccII	CGCG	2 cut(s)	838, 1739
AccIII	TCCGGA	1 cut(s)	1705
AciI	CCGC	4 cut(s)	838, 1518, 1692, 1943
AclI	AACGTT	1 cut(s)	1197
AclWI	GGATC	2 cut(s)	993, 1898
AcuI	CTGAAG	2 cut(s)	120, 132
AfaI	GTAC	2 cut(s)	5, 1742
AfiI	CCNNNNNNNGG	2 cut(s)	567, 2030
AflII	CTTAAG	1 cut(s)	220
AflIII	ACRYGT	1 cut(s)	1737
AjnI	CCWGG	1 cut(s)	2029
AjuI	GAANNNNNNNTTGG	2 cut(s)	965, 997
Alw21I	GWGCWC	3 cut(s)	556, 1248, 1391
Alw26I	GTCTC	2 cut(s)	136, 382
AlwI	GGATC	2 cut(s)	993, 1898
AlwNI	CAGNNNCTG	2 cut(s)	134, 1381
Ama87I	CYCGRG	3 cut(s)	390, 745, 1509
Aor13HI	TCCGGA	1 cut(s)	1705
AoxI	GGCC	3 cut(s)	216, 816, 1254
ApeKI	GCWGC	1 cut(s)	1361
Asp700I	GAANNNNTTC	1 cut(s)	1152
AspLEI	GCGC	1 cut(s)	838
AspS9I	GGNCC	1 cut(s)	1354
AsuC2I	CCSGG	2 cut(s)	1496, 1591
AsuHPI	GGTGA	6 cut(s)	290, 680, 982, 1139, 1157, 1516
AsuII	TTCGAA	2 cut(s)	487, 1712
AvaI	CYCGRG	3 cut(s)	390, 745, 1509
AvaII	GGWCC	1 cut(s)	1354
BanII	GRGCYC	2 cut(s)	556, 1391
BauI	CACGAG	1 cut(s)	1481
Bbv12I	GWGCWC	3 cut(s)	556, 1248, 1391
BbvCI	CCTCAGC	1 cut(s)	1382
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	2 cut(s)	640, 1864
BciT130I	CCWGG	1 cut(s)	2031
BclI	TGATCA	2 cut(s)	798, 1626
BcnI	CCSGG	2 cut(s)	1496, 1591
BcoDI	GTCTC	2 cut(s)	136, 382
BfaI	CTAG	2 cut(s)	105, 705
BfrI	CTTAAG	1 cut(s)	220
BglII	AGATCT	2 cut(s)	245, 1224
BisI	GCNGC	2 cut(s)	1362, 1944
BlpI	GCTNAGC	2 cut(s)	504, 1134
BlsI	GCNGC	2 cut(s)	1363, 1945
Bme1390I	CCNGG	3 cut(s)	1496, 1591, 2031
Bme18I	GGWCC	1 cut(s)	1354
BmeT110I	CYCGRG	3 cut(s)	390, 745, 1509
BmgT120I	GGNCC	1 cut(s)	1354
BmrFI	CCNGG	3 cut(s)	1496, 1591, 2031
BmsI	GCATC	3 cut(s)	1161, 1266, 1966
Bpu10I	CCTNAGC	1 cut(s)	1382
Bpu1102I	GCTNAGC	2 cut(s)	504, 1134
Bpu14I	TTCGAA	2 cut(s)	487, 1712
BpuEI	CTTGAG	1 cut(s)	1624
BpuMI	CCSGG	2 cut(s)	1496, 1591
Bsa29I	ATCGAT	1 cut(s)	1404
BsaAI	YACGTR	1 cut(s)	1657
BsaBI	GATNNNNATC	2 cut(s)	1223, 1897
BsaI	GGTCTC	1 cut(s)	382
BsaJI	CCNNGG	3 cut(s)	1285, 1508, 1590
BsaWI	WCCGGW	2 cut(s)	187, 1705
BsaXI	ACNNNNNCTCC	4 cut(s)	700, 730, 1378, 1408
Bsc4I	CCNNNNNNNGG	2 cut(s)	567, 2030
Bse3DI	GCAATG	1 cut(s)	419
Bse8I	GATNNNNATC	2 cut(s)	1223, 1897
BseAI	TCCGGA	1 cut(s)	1705
BseBI	CCWGG	1 cut(s)	2031
BseCI	ATCGAT	1 cut(s)	1404
BseDI	CCNNGG	3 cut(s)	1285, 1508, 1590
BseGI	GGATG	2 cut(s)	1808, 2004
BseJI	GATNNNNATC	2 cut(s)	1223, 1897
BseLI	CCNNNNNNNGG	2 cut(s)	567, 2030
BseMI	GCAATG	1 cut(s)	419
BseMII	CTCAG	3 cut(s)	1125, 1373, 1829
BseRI	GAGGAG	1 cut(s)	1399
BseXI	GCAGC	1 cut(s)	1348
BseYI	CCCAGC	2 cut(s)	1343, 1541
Bsh1236I	CGCG	2 cut(s)	838, 1739
BshFI	GGCC	3 cut(s)	218, 818, 1256
BshVI	ATCGAT	1 cut(s)	1404
BsiHKAI	GWGCWC	3 cut(s)	556, 1248, 1391
BsiHKCI	CYCGRG	3 cut(s)	390, 745, 1509
BsiSI	CCGG	4 cut(s)	188, 1496, 1590, 1706
BsiWI	CGTACG	1 cut(s)	1740
BslI	CCNNNNNNNGG	2 cut(s)	567, 2030
BsmAI	GTCTC	2 cut(s)	136, 382
BsnI	GGCC	3 cut(s)	218, 818, 1256
Bso31I	GGTCTC	1 cut(s)	382
BsoBI	CYCGRG	3 cut(s)	390, 745, 1509
Bsp119I	TTCGAA	2 cut(s)	487, 1712
Bsp1286I	GDGCHC	3 cut(s)	556, 1248, 1391
Bsp13I	TCCGGA	1 cut(s)	1705
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
Bsp1720I	GCTNAGC	2 cut(s)	504, 1134
BspACI	CCGC	4 cut(s)	838, 1518, 1692, 1943
BspANI	GGCC	3 cut(s)	218, 818, 1256
BspCNI	CTCAG	3 cut(s)	1126, 1374, 1830
BspDI	ATCGAT	1 cut(s)	1404
BspEI	TCCGGA	1 cut(s)	1705
BspFNI	CGCG	2 cut(s)	838, 1739
BspHI	TCATGA	2 cut(s)	436, 1989
BspPI	GGATC	2 cut(s)	993, 1898
BspT104I	TTCGAA	2 cut(s)	487, 1712
BspTI	CTTAAG	1 cut(s)	220
BspTNI	GGTCTC	1 cut(s)	382
BsrDI	GCAATG	1 cut(s)	419
BsrGI	TGTACA	1 cut(s)	3
BssECI	CCNNGG	3 cut(s)	1285, 1508, 1590
BssMI	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
BssNAI	GTATAC	1 cut(s)	573
BssSI	CACGAG	1 cut(s)	1481
Bst1107I	GTATAC	1 cut(s)	573
Bst2BI	CACGAG	1 cut(s)	1481
Bst2UI	CCWGG	1 cut(s)	2031
Bst4CI	ACNGT	8 cut(s)	130, 369, 531, 659, 886, 1127, 1371, 1777
Bst6I	CTCTTC	4 cut(s)	42, 387, 749, 1548
BstAFI	CTTAAG	1 cut(s)	220
BstAUI	TGTACA	1 cut(s)	3
BstBAI	YACGTR	1 cut(s)	1657
BstBI	TTCGAA	2 cut(s)	487, 1712
BstDEI	CTNAG	5 cut(s)	504, 726, 1134, 1382, 1838
BstEII	GGTNACC	1 cut(s)	668
BstF5I	GGATG	2 cut(s)	1808, 2004
BstFNI	CGCG	2 cut(s)	838, 1739
BstHHI	GCGC	1 cut(s)	838
BstKTI	GATC	9 cut(s)	248, 413, 778, 801, 988, 1227, 1408, 1629, 1906
BstMAI	GTCTC	2 cut(s)	136, 382
BstMBI	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
BstNI	CCWGG	1 cut(s)	2031
BstPI	GGTNACC	1 cut(s)	668
BstSCI	CCNGG	3 cut(s)	1494, 1589, 2029
BstSNI	TACGTA	1 cut(s)	1657
BstUI	CGCG	2 cut(s)	838, 1739
BstV1I	GCAGC	1 cut(s)	1348
BstX2I	RGATCY	3 cut(s)	245, 985, 1224
BstXI	CCANNNNNNTGG	1 cut(s)	1432
BstYI	RGATCY	3 cut(s)	245, 985, 1224
BstZ17I	GTATAC	1 cut(s)	573
Bsu15I	ATCGAT	1 cut(s)	1404
BsuRI	GGCC	3 cut(s)	218, 818, 1256
BsuTUI	ATCGAT	1 cut(s)	1404
BtsCI	GGATG	2 cut(s)	1808, 2004
BtsIMutI	CAGTG	1 cut(s)	1367
CaiI	CAGNNNCTG	2 cut(s)	134, 1381
CciI	TCATGA	2 cut(s)	436, 1989
CfoI	GCGC	1 cut(s)	838
Cfr13I	GGNCC	1 cut(s)	1354
ClaI	ATCGAT	1 cut(s)	1404
CseI	GACGC	1 cut(s)	533
Csp6I	GTAC	2 cut(s)	4, 1741
CspCI	CAANNNNNGTGG	2 cut(s)	1246, 1281
CviAII	CATG	7 cut(s)	373, 437, 1033, 1426, 1463, 1563, 1990
CviQI	GTAC	2 cut(s)	4, 1741
DdeI	CTNAG	5 cut(s)	504, 726, 1134, 1382, 1838
DpnI	GATC	9 cut(s)	247, 412, 777, 800, 987, 1226, 1407, 1628, 1905
DpnII	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
DrdI	GACNNNNNNGTC	1 cut(s)	266
DseDI	GACNNNNNNGTC	1 cut(s)	266
Eam1104I	CTCTTC	4 cut(s)	42, 387, 749, 1548
EarI	CTCTTC	4 cut(s)	42, 387, 749, 1548
Ecl136II	GAGCTC	2 cut(s)	554, 1389
Eco105I	TACGTA	1 cut(s)	1657
Eco147I	AGGCCT	1 cut(s)	218
Eco24I	GRGCYC	2 cut(s)	556, 1391
Eco31I	GGTCTC	1 cut(s)	382
Eco47I	GGWCC	1 cut(s)	1354
Eco53kI	GAGCTC	2 cut(s)	554, 1389
Eco57I	CTGAAG	2 cut(s)	120, 132
Eco88I	CYCGRG	3 cut(s)	390, 745, 1509
Eco91I	GGTNACC	1 cut(s)	668
EcoICRI	GAGCTC	2 cut(s)	554, 1389
EcoO65I	GGTNACC	1 cut(s)	668
EcoRII	CCWGG	1 cut(s)	2029
EcoT38I	GRGCYC	2 cut(s)	556, 1391
FaeI	CATG	7 cut(s)	376, 440, 1036, 1429, 1466, 1566, 1993
FalI	AAGNNNNNCTT	2 cut(s)	235, 267
FatI	CATG	7 cut(s)	372, 436, 1032, 1425, 1462, 1562, 1989
FbaI	TGATCA	2 cut(s)	798, 1626
FblI	GTMKAC	1 cut(s)	572
Fnu4HI	GCNGC	2 cut(s)	1362, 1944
FokI	GGATG	2 cut(s)	1815, 2011
FriOI	GRGCYC	2 cut(s)	556, 1391
Fsp4HI	GCNGC	2 cut(s)	1362, 1944
FspBI	CTAG	2 cut(s)	105, 705
GlaI	GCGC	1 cut(s)	837
GluI	GCNGC	2 cut(s)	1362, 1944
GsaI	CCCAGC	2 cut(s)	1347, 1545
HaeIII	GGCC	3 cut(s)	218, 818, 1256
HapII	CCGG	4 cut(s)	188, 1496, 1590, 1706
HgaI	GACGC	1 cut(s)	533
HhaI	GCGC	1 cut(s)	838
Hin1II	CATG	7 cut(s)	376, 440, 1036, 1429, 1466, 1566, 1993
Hin6I	GCGC	1 cut(s)	836
HinP1I	GCGC	1 cut(s)	836
HindIII	AAGCTT	1 cut(s)	939
HpaII	CCGG	4 cut(s)	188, 1496, 1590, 1706
HphI	GGTGA	6 cut(s)	290, 680, 982, 1139, 1157, 1516
Hpy166II	GTNNAC	3 cut(s)	573, 1123, 1780
Hpy188I	TCNGA	7 cut(s)	151, 234, 549, 1377, 1890, 1903, 1998
Hpy8I	GTNNAC	3 cut(s)	573, 1123, 1780
Hpy99I	CGWCG	4 cut(s)	208, 211, 272, 539
HpyAV	CCTTC	4 cut(s)	94, 468, 1124, 1793
HpyCH4III	ACNGT	8 cut(s)	130, 369, 531, 659, 886, 1127, 1371, 1777
HpyCH4IV	ACGT	5 cut(s)	203, 267, 1197, 1471, 1656
HpyCH4V	TGCA	5 cut(s)	521, 1174, 1279, 1792, 1930
HpyF3I	CTNAG	5 cut(s)	504, 726, 1134, 1382, 1838
HpySE526I	ACGT	5 cut(s)	203, 267, 1197, 1471, 1656
Hsp92II	CATG	7 cut(s)	376, 440, 1036, 1429, 1466, 1566, 1993
HspAI	GCGC	1 cut(s)	836
Kpn2I	TCCGGA	1 cut(s)	1705
Ksp22I	TGATCA	2 cut(s)	798, 1626
Kzo9I	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
LmnI	GCTCC	3 cut(s)	1243, 1386, 1497
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	3 cut(s)	1161, 1266, 1966
MaeI	CTAG	2 cut(s)	105, 705
MaeII	ACGT	5 cut(s)	203, 267, 1197, 1471, 1656
MaeIII	GTNAC	4 cut(s)	668, 890, 1201, 1697
MalI	GATC	9 cut(s)	247, 412, 777, 800, 987, 1226, 1407, 1628, 1905
MboI	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
MflI	RGATCY	3 cut(s)	245, 985, 1224
MhlI	GDGCHC	3 cut(s)	556, 1248, 1391
MluCI	AATT	9 cut(s)	12, 294, 356, 588, 790, 821, 973, 1290, 1349
MluI	ACGCGT	1 cut(s)	1737
MlyI	GAGTC	2 cut(s)	1886, 1995
MmeI	TCCRAC	1 cut(s)	963
MroI	TCCGGA	1 cut(s)	1705
MroXI	GAANNNNTTC	1 cut(s)	1152
MseI	TTAA	6 cut(s)	53, 221, 1038, 1221, 1487, 2018
MslI	CAYNNNNRTG	2 cut(s)	1430, 1670
MspA1I	CMGCKG	1 cut(s)	1694
MspCI	CTTAAG	1 cut(s)	220
MspI	CCGG	4 cut(s)	188, 1496, 1590, 1706
MspR9I	CCNGG	3 cut(s)	1496, 1591, 2031
MvaI	CCWGG	1 cut(s)	2031
MvnI	CGCG	2 cut(s)	838, 1739
NciI	CCSGG	2 cut(s)	1496, 1591
NdeII	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
NlaIII	CATG	7 cut(s)	376, 440, 1036, 1429, 1466, 1566, 1993
NmeAIII	GCCGAG	1 cut(s)	1310
NmuCI	GTSAC	1 cut(s)	668
NspV	TTCGAA	2 cut(s)	487, 1712
PaeR7I	CTCGAG	2 cut(s)	390, 745
PagI	TCATGA	2 cut(s)	436, 1989
PceI	AGGCCT	1 cut(s)	218
PcsI	WCGNNNNNNNCGW	5 cut(s)	264, 276, 531, 743, 1556
PdmI	GAANNNNTTC	1 cut(s)	1152
Pfl23II	CGTACG	1 cut(s)	1740
PflMI	CCANNNNNTGG	1 cut(s)	2030
PfoI	TCCNGGA	1 cut(s)	1494
PkrI	GCNGC	2 cut(s)	1363, 1945
PleI	GAGTC	2 cut(s)	1885, 1994
PpsI	GAGTC	2 cut(s)	1885, 1994
Ppu21I	YACGTR	1 cut(s)	1657
PsiI	TTATAA	1 cut(s)	848
Psp124BI	GAGCTC	2 cut(s)	556, 1391
Psp1406I	AACGTT	1 cut(s)	1197
Psp6I	CCWGG	1 cut(s)	2029
PspEI	GGTNACC	1 cut(s)	668
PspFI	CCCAGC	2 cut(s)	1343, 1541
PspGI	CCWGG	1 cut(s)	2029
PspLI	CGTACG	1 cut(s)	1740
PspPI	GGNCC	1 cut(s)	1354
PstNI	CAGNNNCTG	2 cut(s)	134, 1381
PsuI	RGATCY	3 cut(s)	245, 985, 1224
RsaI	GTAC	2 cut(s)	5, 1742
RsaNI	GTAC	2 cut(s)	4, 1741
RseI	CAYNNNNRTG	2 cut(s)	1430, 1670
SacI	GAGCTC	2 cut(s)	556, 1391
SaqAI	TTAA	6 cut(s)	53, 221, 1038, 1221, 1487, 2018
SatI	GCNGC	2 cut(s)	1362, 1944
Sau3AI	GATC	9 cut(s)	245, 410, 775, 798, 985, 1224, 1405, 1626, 1903
Sau96I	GGNCC	1 cut(s)	1354
SchI	GAGTC	2 cut(s)	1886, 1995
ScrFI	CCNGG	3 cut(s)	1496, 1591, 2031
SduI	GDGCHC	3 cut(s)	556, 1248, 1391
SfaNI	GCATC	3 cut(s)	1161, 1266, 1966
Sfr274I	CTCGAG	2 cut(s)	390, 745
SfuI	TTCGAA	2 cut(s)	487, 1712
SinI	GGWCC	1 cut(s)	1354
SlaI	CTCGAG	2 cut(s)	390, 745
SmiMI	CAYNNNNRTG	2 cut(s)	1430, 1670
SmlI	CTYRAG	4 cut(s)	220, 390, 745, 1639
SmoI	CTYRAG	4 cut(s)	220, 390, 745, 1639
SnaBI	TACGTA	1 cut(s)	1657
Sse9I	AATT	9 cut(s)	12, 294, 356, 588, 790, 821, 973, 1290, 1349
SseBI	AGGCCT	1 cut(s)	218
SsiI	CCGC	4 cut(s)	838, 1518, 1692, 1943
SspI	AATATT	1 cut(s)	1504
SspMI	CTAG	2 cut(s)	105, 705
SstI	GAGCTC	2 cut(s)	556, 1391
StuI	AGGCCT	1 cut(s)	218
StyD4I	CCNGG	3 cut(s)	1494, 1589, 2029
TaaI	ACNGT	8 cut(s)	130, 369, 531, 659, 886, 1127, 1371, 1777
TaiI	ACGT	5 cut(s)	206, 270, 1200, 1474, 1659
TaqII	GACCGA	1 cut(s)	1371
TasI	AATT	9 cut(s)	12, 294, 356, 588, 790, 821, 973, 1290, 1349
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	1 cut(s)	1946
Tru1I	TTAA	6 cut(s)	53, 221, 1038, 1221, 1487, 2018
Tru9I	TTAA	6 cut(s)	53, 221, 1038, 1221, 1487, 2018
TscAI	CASTG	1 cut(s)	1374
TseFI	GTSAC	1 cut(s)	668
TseI	GCWGC	1 cut(s)	1361
Tsp45I	GTSAC	1 cut(s)	668
TspGWI	ACGGA	2 cut(s)	540, 1565
TspRI	CASTG	1 cut(s)	1374
Van91I	CCANNNNNTGG	1 cut(s)	2030
Vha464I	CTTAAG	1 cut(s)	220
VpaK11BI	GGWCC	1 cut(s)	1354
XhoI	CTCGAG	2 cut(s)	390, 745
XmiI	GTMKAC	1 cut(s)	572
XmnI	GAANNNNTTC	1 cut(s)	1152
XspI	CTAG	2 cut(s)	105, 705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.