Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0013505

Physical Location & Seq

Genomic Coordinates Forward (+)

76966537 .. 76968722

Gene Structure 2186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG593300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGACGACCTCACCGCCTCAATCCGCGCCACCCAAAACGAGCACGACCTCAACTCCCTCCTCTCCCCCTACAAGTCCCGCAACCTCTCCATCCGCTTCATGGTCTCCCTCCTCTCCCGCGAGCCCGACTGGCGCCGCTCCCTCGCCATCCTCGACTGGATCAACGACATCGCCCTGTACTCTCCCTCCGTCTTCGCCTACAACGTCGTCATCCGCAACGTCCTCCGCGCCAAGCAGTGGCAAGTCGCCCACGGCCTGTTCGACGAAATGCGCCACAGAGCTCTGGCGCCGGACCGCTACACTTACTCCACTCTCATCACCGCGTTTGGGAAGTCCGGCATGTTCGACGCCGCGCTCTCGTGGCTGCAGAAGATGGAGGAGGACCGGGTGTCCGGGGACCTGGTGCTGTATAGCAACTTGATTGAGCTGTCTAGGAAACTGTGTGATTATAGCAAAGCAATTTCGATATTTTCCAGGCTGAAGAGGTTGGGGATAATGCCGGATTTGGTGGCTTATAACTCGATGATCAATGTGTTTGGTAAGGCCAAGTTGTTTAGGGAGGCCAGGGTTTTGCTGAAGGAGATGAGGGCGGTGGGGGTTTTGCCGGACACTGTTAGCTACTCGACGCTTTTGACAATGTACATTGAGAATGAGAAGTTTGTGGAGGCGTTGGCTGTGTTCTCGGAGATGAATGAGGTCAAGTGCCCGCTTGATCTCACCACGTGTAATATTATGATTGATGTTTATGGGCAGCTGGATATGGCGAAGGAGGCTGATAGGTTGTTTTGGAGCATGAGGAAGATGGGGCTTGAGCCGAATGTTGTTAGTTACAATACTCTTTTGAGAGTTTATGGTGATGCTGAGCTTTTCGGGGAAGCCATTCATCTTTTTCGAATGATGCAGAGAATGGATGTGGAGCAGAATGTTGTCACGTACAATACGATGATTAGGATTTATGGGAAGTCGCTTGAGCATGAAAAGGCTACAAATCTTGTGCAGGAAATGCAGAAGAGGGGGATTCAGCCAAATGCCATTACATACTCGACGATTATATCTATATGGGGTAGGGCTGGGAAATTAGACAGGGCGGCAATGCTGTTTCAAAAGCTGAGGAGCTCTGGGGTTGAGATTGATCAGGTTCTTTATCAGACAATGATTGTATCTTATGAGAGAGTAGGTTTGGTTGCTCATGCTAAGCGCTTGCTTCATGAGCTTAAGCGCCCAGACAATATCCCGAGGGAGACTGCAATTACCATTCTTGCTGGAGCCGGTCGTGTAGAAGAGGCGACATGGGTTTTCCGTCAGGCTTTTGAGGCTGGGGAGGTGAAGGATATAGCTGTGTTTGGTTGTATGATTGAGCTTTTCTCAAGAAACCGGAAGTATGCAAATTGCATTGAAGTGTTTGAAAATATGAGAGTGGCAGGATACTTTCCTGCTTCCCATGTGATTGGTCTAGTTCTCAACGCATATGGAAAGTTACGGGAGTTTGAGAAGGCTGATGCTGTATATAGGGAGATGCAGGAAGAAGGGTGTGTTTTCTCCGATGAAATTCACTTCCAAATGCTCAGTCTTTATGGTGCAAGAAGGGACTTTAAGACGGTAGAGGCAATGTTTGAGAGGCTGGTCTCCGATCCCAACATCAACAAAAAGGAGTTGCATCTTGTTGTTGCAGGCATCTATGAAAGATCAAACAGACTTAATGATTCATACCGGATCATGAACAGGATGAATGAAAGTCGAGCTTTGAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0031967 GO:0031975 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

584

Amino Acids

67.25

Weight (kDa)

8.49

Isoelectric Point (pI)

30.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	62 - 111	2.3e-13	PPR repeat family
PPR	PF01535	100 - 129	9.5e-07	PPR repeat
PPR_3	PF13812	122 - 181	4e-08	Pentatricopeptide repeat domain
PPR_long	PF17177	152 - 235	5.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	164 - 196	4.4e-06	PPR repeat
PPR_2	PF13041	167 - 213	3.7e-11	PPR repeat family
PPR	PF01535	170 - 199	2.2e-06	PPR repeat
PPR_3	PF13812	191 - 251	4.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	202 - 249	2.7e-10	PPR repeat family
PPR_3	PF13812	237 - 286	2.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	238 - 284	1.9e-10	PPR repeat family
PPR_long	PF17177	259 - 421	5.4e-12	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	268 - 300	1e-05	PPR repeat
PPR_2	PF13041	272 - 317	1.9e-11	PPR repeat family
PPR_3	PF13812	296 - 355	4.9e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	308 - 352	5.2e-15	PPR repeat family
PPR	PF01535	310 - 340	4.2e-07	PPR repeat
PPR_1	PF12854	338 - 369	2.5e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013505)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39980
fragaria_vesca	FvH4_6g49520
malus_domestica	MD09G1044200.v1.1
prunus_persica	Prupe.3G273600_v2.0.a1
pyrus_communis	pycom111g03450
rosa_chinensis	RchiOBHm_Chr2g0169431
rosa_laevigata	RLG00000021863
rosa_multiflora	Rmu_co8342305.1_g000001 Rmu_sc0004665.1_g000014 Rmu_sc0004665.1_g000015 Rmu_sc0006806.1_g000040
rosa_roxburghii	Rroxscaffold_2G00082130 Rroxscaffold_3G00240790
rosa_samantha	Rh2AG611300 Rh2BG624900 Rh2CG593300 Rh2DG635500
rosa_wichuraiana	Rw2G050730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	516
AccB1I	GGYRCC	2 cut(s)	132, 286
AccB7I	CCANNNNNTGG	1 cut(s)	237
AccBSI	CCGCTC	1 cut(s)	138
AccII	CGCG	5 cut(s)	27, 120, 228, 323, 353
AclWI	GGATC	3 cut(s)	167, 1625, 1721
AcsI	RAATTY	1 cut(s)	1548
AcuI	CTGAAG	2 cut(s)	500, 596
AcvI	CACGTG	1 cut(s)	723
AcyI	GRCGYC	3 cut(s)	133, 287, 348
AdeI	CACNNNGTG	1 cut(s)	723
AfaI	GTAC	3 cut(s)	179, 641, 935
AfeI	AGCGCT	1 cut(s)	1199
AfiI	CCNNNNNNNGG	3 cut(s)	100, 237, 327
AflII	CTTAAG	1 cut(s)	1214
AflIII	ACRYGT	1 cut(s)	722
AgsI	TTSAA	4 cut(s)	1103, 1397, 1406, 1747
AhdI	GACNNNNNGTC	1 cut(s)	388
AjnI	CCWGG	3 cut(s)	399, 473, 563
Alw21I	GWGCWC	3 cut(s)	45, 283, 1118
Alw26I	GTCTC	3 cut(s)	109, 1235, 1630
AlwI	GGATC	3 cut(s)	167, 1625, 1721
Ama87I	CYCGRG	1 cut(s)	1234
Aor51HI	AGCGCT	1 cut(s)	1199
AoxI	GGCC	3 cut(s)	253, 543, 561
ApeKI	GCWGC	2 cut(s)	364, 751
ApoI	RAATTY	1 cut(s)	1548
ArsI	GACNNNNNNTTYG	2 cut(s)	1552, 1584
Asp700I	GAANNNNTTC	1 cut(s)	879
AspLEI	GCGC	8 cut(s)	29, 135, 230, 273, 289, 355, 1200, 1221
AspS9I	GGNCC	3 cut(s)	292, 382, 397
AsuC2I	CCSGG	2 cut(s)	386, 394
AsuHPI	GGTGA	5 cut(s)	4, 310, 709, 866, 1336
AsuII	TTCGAA	1 cut(s)	892
AvaI	CYCGRG	1 cut(s)	1234
AvaII	GGWCC	3 cut(s)	292, 382, 397
BaeGI	GKGCMC	1 cut(s)	707
BanI	GGYRCC	2 cut(s)	132, 286
BanII	GRGCYC	3 cut(s)	126, 283, 1118
BauI	CACGAG	1 cut(s)	358
BbrPI	CACGTG	1 cut(s)	723
BbsI	GAAGAC	1 cut(s)	184
Bbv12I	GWGCWC	3 cut(s)	45, 283, 1118
BbvCI	CCTCAGC	1 cut(s)	1109
BbvI	GCAGC	2 cut(s)	351, 763
BccI	CCATC	4 cut(s)	98, 155, 367, 796
BceAI	ACGGC	1 cut(s)	268
BciT130I	CCWGG	3 cut(s)	401, 475, 565
BciVI	GTATCC	1 cut(s)	1418
BclI	TGATCA	2 cut(s)	525, 1132
BcnI	CCSGG	2 cut(s)	386, 394
BcoDI	GTCTC	3 cut(s)	109, 1235, 1630
BfaI	CTAG	2 cut(s)	432, 1454
BfmI	CTRYAG	1 cut(s)	365
BfoI	RGCGCY	4 cut(s)	136, 290, 1201, 1222
BfrI	CTTAAG	1 cut(s)	1214
BfuI	GTATCC	1 cut(s)	1418
BglI	GCCNNNNNGGC	1 cut(s)	130
BisI	GCNGC	5 cut(s)	136, 351, 365, 752, 1089
BlpI	GCTNAGC	2 cut(s)	861, 1194
BlsI	GCNGC	5 cut(s)	137, 352, 366, 753, 1090
Bme1390I	CCNGG	5 cut(s)	386, 394, 401, 475, 565
Bme18I	GGWCC	3 cut(s)	292, 382, 397
BmeRI	GACNNNNNGTC	1 cut(s)	388
BmeT110I	CYCGRG	1 cut(s)	1234
BmgT120I	GGNCC	3 cut(s)	292, 382, 397
BmiI	GGNNCC	4 cut(s)	134, 288, 398, 1267
BmrFI	CCNGG	5 cut(s)	386, 394, 401, 475, 565
BmsI	GCATC	6 cut(s)	847, 888, 1489, 1506, 1666, 1683
BpiI	GAAGAC	1 cut(s)	184
BplI	GAGNNNNNCTC	2 cut(s)	1349, 1381
BpmI	CTGGAG	1 cut(s)	1284
Bpu10I	CCTNAGC	1 cut(s)	1109
Bpu1102I	GCTNAGC	2 cut(s)	861, 1194
Bpu14I	TTCGAA	1 cut(s)	892
BpuEI	CTTGAG	3 cut(s)	830, 989, 1351
BpuMI	CCSGG	2 cut(s)	386, 394
BsaAI	YACGTR	2 cut(s)	723, 933
BsaHI	GRCGYC	3 cut(s)	133, 287, 348
BsaI	GGTCTC	2 cut(s)	109, 1630
BsaJI	CCNNGG	4 cut(s)	250, 393, 564, 1235
BsaWI	WCCGGW	2 cut(s)	1374, 1710
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 170, 200, 290, 320
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 237, 327
Bse118I	RCCGGY	1 cut(s)	1268
Bse1I	ACTGG	2 cut(s)	134, 161
Bse3DI	GCAATG	2 cut(s)	1098, 1614
BseBI	CCWGG	3 cut(s)	401, 475, 565
BseDI	CCNNGG	4 cut(s)	250, 393, 564, 1235
BseGI	GGATG	5 cut(s)	90, 147, 210, 916, 1731
BseLI	CCNNNNNNNGG	3 cut(s)	100, 237, 327
BseMI	GCAATG	2 cut(s)	1098, 1614
BseMII	CTCAG	3 cut(s)	852, 1100, 1579
BseNI	ACTGG	2 cut(s)	134, 161
BseRI	GAGGAG	4 cut(s)	50, 101, 392, 1126
BseSI	GKGCMC	1 cut(s)	707
BseXI	GCAGC	2 cut(s)	351, 763
BseYI	CCCAGC	2 cut(s)	1070, 1316
BsgI	GTGCAG	1 cut(s)	1016
Bsh1236I	CGCG	5 cut(s)	27, 120, 228, 323, 353
Bsh1285I	CGRYCG	1 cut(s)	1273
BshFI	GGCC	3 cut(s)	255, 545, 563
BshNI	GGYRCC	2 cut(s)	132, 286
BsiEI	CGRYCG	1 cut(s)	1273
BsiHKAI	GWGCWC	3 cut(s)	45, 283, 1118
BsiHKCI	CYCGRG	1 cut(s)	1234
BsiSI	CCGG	9 cut(s)	290, 336, 385, 393, 500, 605, 1269, 1375, 1711
BslFI	GGGAC	3 cut(s)	61, 410, 1601
BslI	CCNNNNNNNGG	3 cut(s)	100, 237, 327
BsmAI	GTCTC	3 cut(s)	109, 1235, 1630
BsmFI	GGGAC	3 cut(s)	61, 410, 1601
BsnI	GGCC	3 cut(s)	255, 545, 563
Bso31I	GGTCTC	2 cut(s)	109, 1630
BsoBI	CYCGRG	1 cut(s)	1234
Bsp119I	TTCGAA	1 cut(s)	892
Bsp1286I	GDGCHC	5 cut(s)	45, 126, 283, 707, 1118
Bsp1407I	TGTACA	1 cut(s)	639
Bsp143I	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
Bsp1720I	GCTNAGC	2 cut(s)	861, 1194
BspANI	GGCC	3 cut(s)	255, 545, 563
BspCNI	CTCAG	3 cut(s)	853, 1101, 1578
BspFNI	CGCG	5 cut(s)	27, 120, 228, 323, 353
BspHI	TCATGA	3 cut(s)	1207, 1716, 1751
BspLI	GGNNCC	4 cut(s)	134, 288, 398, 1267
BspMAI	CTGCAG	1 cut(s)	369
BspPI	GGATC	3 cut(s)	167, 1625, 1721
BspT104I	TTCGAA	1 cut(s)	892
BspT107I	GGYRCC	2 cut(s)	132, 286
BspTI	CTTAAG	1 cut(s)	1214
BspTNI	GGTCTC	2 cut(s)	109, 1630
BsrBI	CCGCTC	1 cut(s)	138
BsrDI	GCAATG	2 cut(s)	1098, 1614
BsrFI	RCCGGY	1 cut(s)	1268
BsrGI	TGTACA	1 cut(s)	639
BsrI	ACTGG	2 cut(s)	134, 161
BssAI	RCCGGY	1 cut(s)	1268
BssECI	CCNNGG	4 cut(s)	250, 393, 564, 1235
BssMI	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
BssNI	GRCGYC	3 cut(s)	133, 287, 348
BssSI	CACGAG	1 cut(s)	358
Bst2BI	CACGAG	1 cut(s)	358
Bst2UI	CCWGG	3 cut(s)	401, 475, 565
Bst4CI	ACNGT	3 cut(s)	441, 613, 1600
Bst6I	CTCTTC	3 cut(s)	476, 1004, 1275
BstACI	GRCGYC	3 cut(s)	133, 287, 348
BstAFI	CTTAAG	1 cut(s)	1214
BstAPI	GCANNNNNTGC	1 cut(s)	1003
BstAUI	TGTACA	1 cut(s)	639
BstBAI	YACGTR	2 cut(s)	723, 933
BstBI	TTCGAA	1 cut(s)	892
BstC8I	GCNNGC	4 cut(s)	122, 707, 1202, 1672
BstDEI	CTNAG	4 cut(s)	861, 1109, 1194, 1565
BstDSI	CCRYGG	1 cut(s)	250
BstF5I	GGATG	5 cut(s)	90, 147, 210, 916, 1731
BstFNI	CGCG	5 cut(s)	27, 120, 228, 323, 353
BstH2I	RGCGCY	4 cut(s)	136, 290, 1201, 1222
BstHHI	GCGC	8 cut(s)	29, 135, 230, 273, 289, 355, 1200, 1221
BstKTI	GATC	7 cut(s)	162, 528, 715, 1135, 1633, 1688, 1716
BstMAI	GTCTC	3 cut(s)	109, 1235, 1630
BstMBI	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
BstMCI	CGRYCG	1 cut(s)	1273
BstMWI	GCNNNNNNNGC	6 cut(s)	130, 361, 770, 1003, 1210, 1313
BstNI	CCWGG	3 cut(s)	401, 475, 565
BstNSI	RCATGY	1 cut(s)	343
BstSCI	CCNGG	5 cut(s)	384, 392, 399, 473, 563
BstSFI	CTRYAG	1 cut(s)	365
BstSLI	GKGCMC	1 cut(s)	707
BstUI	CGCG	5 cut(s)	27, 120, 228, 323, 353
BstV1I	GCAGC	2 cut(s)	351, 763
BstV2I	GAAGAC	1 cut(s)	184
BstXI	CCANNNNNNTGG	1 cut(s)	1448
BsuI	GTATCC	1 cut(s)	1418
BsuRI	GGCC	3 cut(s)	255, 545, 563
BtgI	CCRYGG	1 cut(s)	250
BtgZI	GCGATG	1 cut(s)	154
BtsCI	GGATG	5 cut(s)	90, 147, 210, 916, 1731
BtsI	GCAGTG	1 cut(s)	242
BtsIMutI	CAGTG	2 cut(s)	242, 609
Cac8I	GCNNGC	4 cut(s)	122, 707, 1202, 1672
CciI	TCATGA	3 cut(s)	1207, 1716, 1751
CfoI	GCGC	8 cut(s)	29, 135, 230, 273, 289, 355, 1200, 1221
Cfr10I	RCCGGY	1 cut(s)	1268
Cfr13I	GGNCC	3 cut(s)	292, 382, 397
CpoI	CGGWCCG	1 cut(s)	292
CseI	GACGC	2 cut(s)	356, 634
CsiI	ACCWGGT	1 cut(s)	399
Csp6I	GTAC	3 cut(s)	178, 640, 934
CspI	CGGWCCG	1 cut(s)	292
CviQI	GTAC	3 cut(s)	178, 640, 934
DdeI	CTNAG	4 cut(s)	861, 1109, 1194, 1565
DinI	GGCGCC	2 cut(s)	134, 288
DpnI	GATC	7 cut(s)	161, 527, 714, 1134, 1632, 1687, 1715
DpnII	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
DraIII	CACNNNGTG	1 cut(s)	723
DriI	GACNNNNNGTC	1 cut(s)	388
Eam1104I	CTCTTC	3 cut(s)	476, 1004, 1275
Eam1105I	GACNNNNNGTC	1 cut(s)	388
EarI	CTCTTC	3 cut(s)	476, 1004, 1275
Ecl136II	GAGCTC	2 cut(s)	281, 1116
Eco24I	GRGCYC	3 cut(s)	126, 283, 1118
Eco31I	GGTCTC	2 cut(s)	109, 1630
Eco47I	GGWCC	3 cut(s)	292, 382, 397
Eco47III	AGCGCT	1 cut(s)	1199
Eco53kI	GAGCTC	2 cut(s)	281, 1116
Eco57I	CTGAAG	2 cut(s)	500, 596
Eco72I	CACGTG	1 cut(s)	723
Eco88I	CYCGRG	1 cut(s)	1234
EcoICRI	GAGCTC	2 cut(s)	281, 1116
EcoO109I	RGGNCCY	1 cut(s)	397
EcoRII	CCWGG	3 cut(s)	399, 473, 563
EcoT38I	GRGCYC	3 cut(s)	126, 283, 1118
EgeI	GGCGCC	2 cut(s)	134, 288
EheI	GGCGCC	2 cut(s)	134, 288
FalI	AAGNNNNNCTT	1 cut(s)	1726
FaqI	GGGAC	3 cut(s)	61, 410, 1601
FauI	CCCGC	3 cut(s)	86, 125, 714
FauNDI	CATATG	1 cut(s)	1468
FbaI	TGATCA	2 cut(s)	525, 1132
Fnu4HI	GCNGC	5 cut(s)	136, 351, 365, 752, 1089
FokI	GGATG	5 cut(s)	77, 134, 197, 923, 1738
FriOI	GRGCYC	3 cut(s)	126, 283, 1118
Fsp4HI	GCNGC	5 cut(s)	136, 351, 365, 752, 1089
FspBI	CTAG	2 cut(s)	432, 1454
GlaI	GCGC	8 cut(s)	28, 134, 229, 272, 288, 354, 1199, 1220
GluI	GCNGC	5 cut(s)	136, 351, 365, 752, 1089
GsaI	CCCAGC	2 cut(s)	1074, 1320
GsuI	CTGGAG	1 cut(s)	1284
HaeII	RGCGCY	4 cut(s)	136, 290, 1201, 1222
HaeIII	GGCC	3 cut(s)	255, 545, 563
HapII	CCGG	9 cut(s)	290, 336, 385, 393, 500, 605, 1269, 1375, 1711
HgaI	GACGC	2 cut(s)	356, 634
HhaI	GCGC	8 cut(s)	29, 135, 230, 273, 289, 355, 1200, 1221
Hin1I	GRCGYC	3 cut(s)	133, 287, 348
Hin6I	GCGC	8 cut(s)	27, 133, 228, 271, 287, 353, 1198, 1219
HinP1I	GCGC	8 cut(s)	27, 133, 228, 271, 287, 353, 1198, 1219
HinfI	GANTC	2 cut(s)	1018, 1703
HpaII	CCGG	9 cut(s)	290, 336, 385, 393, 500, 605, 1269, 1375, 1711
HphI	GGTGA	5 cut(s)	4, 310, 709, 866, 1336
Hpy188I	TCNGA	4 cut(s)	685, 1149, 1543, 1630
Hpy188III	TCNNGA	5 cut(s)	1208, 1234, 1368, 1717, 1752
Hpy99I	CGWCG	5 cut(s)	209, 266, 350, 628, 1048
HpyAV	CCTTC	6 cut(s)	571, 760, 1321, 1486, 1520, 1578
HpyCH4III	ACNGT	3 cut(s)	441, 613, 1600
HpyCH4IV	ACGT	4 cut(s)	204, 219, 722, 932
HpyF10VI	GCNNNNNNNGC	6 cut(s)	130, 361, 770, 1003, 1210, 1313
HpyF3I	CTNAG	4 cut(s)	861, 1109, 1194, 1565
HpySE526I	ACGT	4 cut(s)	204, 219, 722, 932
Hsp92I	GRCGYC	3 cut(s)	133, 287, 348
HspAI	GCGC	8 cut(s)	27, 133, 228, 271, 287, 353, 1198, 1219
KasI	GGCGCC	2 cut(s)	132, 286
Ksp22I	TGATCA	2 cut(s)	525, 1132
Kzo9I	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
LmnI	GCTCC	5 cut(s)	143, 789, 916, 1113, 1265
Lsp1109I	GCAGC	2 cut(s)	351, 763
LweI	GCATC	6 cut(s)	847, 888, 1489, 1506, 1666, 1683
MabI	ACCWGGT	1 cut(s)	399
MaeI	CTAG	2 cut(s)	432, 1454
MaeII	ACGT	4 cut(s)	204, 219, 722, 932
MaeIII	GTNAC	3 cut(s)	827, 928, 1476
MalI	GATC	7 cut(s)	161, 527, 714, 1134, 1632, 1687, 1715
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
MboII	GAAGA	7 cut(s)	184, 382, 493, 811, 1021, 1292, 1535
MhlI	GDGCHC	5 cut(s)	45, 126, 283, 707, 1118
MluCI	AATT	5 cut(s)	459, 1076, 1248, 1387, 1548
Mly113I	GGCGCC	2 cut(s)	133, 287
MroXI	GAANNNNTTC	1 cut(s)	879
MseI	TTAA	3 cut(s)	1215, 1593, 1698
MslI	CAYNNNNRTG	1 cut(s)	1397
MspA1I	CMGCKG	1 cut(s)	754
MspCI	CTTAAG	1 cut(s)	1214
MspI	CCGG	9 cut(s)	290, 336, 385, 393, 500, 605, 1269, 1375, 1711
MspR9I	CCNGG	5 cut(s)	386, 394, 401, 475, 565
MvaI	CCWGG	3 cut(s)	401, 475, 565
MvnI	CGCG	5 cut(s)	27, 120, 228, 323, 353
MwoI	GCNNNNNNNGC	6 cut(s)	130, 361, 770, 1003, 1210, 1313
NarI	GGCGCC	2 cut(s)	133, 287
NciI	CCSGG	2 cut(s)	386, 394
NdeI	CATATG	1 cut(s)	1468
NdeII	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
NlaIV	GGNNCC	4 cut(s)	134, 288, 398, 1267
NmuCI	GTSAC	1 cut(s)	928
NspI	RCATGY	1 cut(s)	343
NspV	TTCGAA	1 cut(s)	892
PagI	TCATGA	3 cut(s)	1207, 1716, 1751
PcsI	WCGNNNNNNNCGW	4 cut(s)	150, 201, 258, 938
PdmI	GAANNNNTTC	1 cut(s)	879
PfeI	GAWTC	2 cut(s)	1018, 1703
PflMI	CCANNNNNTGG	1 cut(s)	237
PkrI	GCNGC	5 cut(s)	137, 352, 366, 753, 1090
PluTI	GGCGCC	2 cut(s)	136, 290
PmaCI	CACGTG	1 cut(s)	723
PmlI	CACGTG	1 cut(s)	723
Ppu21I	YACGTR	2 cut(s)	723, 933
PpuMI	RGGWCCY	1 cut(s)	397
PsiI	TTATAA	1 cut(s)	516
Psp124BI	GAGCTC	2 cut(s)	283, 1118
Psp5II	RGGWCCY	1 cut(s)	397
Psp6I	CCWGG	3 cut(s)	399, 473, 563
PspCI	CACGTG	1 cut(s)	723
PspFI	CCCAGC	2 cut(s)	1070, 1316
PspGI	CCWGG	3 cut(s)	399, 473, 563
PspN4I	GGNNCC	4 cut(s)	134, 288, 398, 1267
PspPI	GGNCC	3 cut(s)	292, 382, 397
PspPPI	RGGWCCY	1 cut(s)	397
PstI	CTGCAG	1 cut(s)	369
PvuII	CAGCTG	1 cut(s)	754
RsaI	GTAC	3 cut(s)	179, 641, 935
RsaNI	GTAC	3 cut(s)	178, 640, 934
RseI	CAYNNNNRTG	1 cut(s)	1397
Rsr2I	CGGWCCG	1 cut(s)	292
RsrII	CGGWCCG	1 cut(s)	292
SacI	GAGCTC	2 cut(s)	283, 1118
SaqAI	TTAA	3 cut(s)	1215, 1593, 1698
SatI	GCNGC	5 cut(s)	136, 351, 365, 752, 1089
Sau3AI	GATC	7 cut(s)	159, 525, 712, 1132, 1630, 1685, 1713
Sau96I	GGNCC	3 cut(s)	292, 382, 397
ScrFI	CCNGG	5 cut(s)	386, 394, 401, 475, 565
SduI	GDGCHC	5 cut(s)	45, 126, 283, 707, 1118
SexAI	ACCWGGT	1 cut(s)	399
SfaNI	GCATC	6 cut(s)	847, 888, 1489, 1506, 1666, 1683
SfcI	CTRYAG	1 cut(s)	365
SfoI	GGCGCC	2 cut(s)	134, 288
SfuI	TTCGAA	1 cut(s)	892
SinI	GGWCC	3 cut(s)	292, 382, 397
SmiMI	CAYNNNNRTG	1 cut(s)	1397
SmlI	CTYRAG	4 cut(s)	809, 968, 1214, 1366
SmoI	CTYRAG	4 cut(s)	809, 968, 1214, 1366
Sse9I	AATT	5 cut(s)	459, 1076, 1248, 1387, 1548
SspDI	GGCGCC	2 cut(s)	132, 286
SspI	AATATT	1 cut(s)	730
SspMI	CTAG	2 cut(s)	432, 1454
SstI	GAGCTC	2 cut(s)	283, 1118
StyD4I	CCNGG	5 cut(s)	384, 392, 399, 473, 563
TaaI	ACNGT	3 cut(s)	441, 613, 1600
TaiI	ACGT	4 cut(s)	207, 222, 725, 935
TaqI	TCGA	9 cut(s)	153, 261, 345, 464, 521, 623, 892, 1043, 1738
TasI	AATT	5 cut(s)	459, 1076, 1248, 1387, 1548
TatI	WGTACW	2 cut(s)	177, 639
TauI	GCSGC	3 cut(s)	138, 353, 1091
TfiI	GAWTC	2 cut(s)	1018, 1703
Tru1I	TTAA	3 cut(s)	1215, 1593, 1698
Tru9I	TTAA	3 cut(s)	1215, 1593, 1698
TscAI	CASTG	2 cut(s)	242, 616
TseFI	GTSAC	1 cut(s)	928
TseI	GCWGC	2 cut(s)	364, 751
Tsp45I	GTSAC	1 cut(s)	928
TspGWI	ACGGA	2 cut(s)	178, 1289
TspRI	CASTG	2 cut(s)	242, 616
Van91I	CCANNNNNTGG	1 cut(s)	237
Vha464I	CTTAAG	1 cut(s)	1214
VpaK11BI	GGWCC	3 cut(s)	292, 382, 397
XapI	RAATTY	1 cut(s)	1548
XceI	RCATGY	1 cut(s)	343
XcmI	CCANNNNNNNNNTGG	1 cut(s)	97
XmnI	GAANNNNTTC	1 cut(s)	879
XspI	CTAG	2 cut(s)	432, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.