Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013505

Physical Location & Seq

Genomic Coordinates Forward (+)

37069548 .. 37071536

Gene Structure 1989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g49520.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCAAGTACCTCCATACCCACCTCCCTTTTCCTTCTCATCCCCATCACTACCCCTCACCACACCCCACAGTTACACATTCACCTCCACCGTCCCCAAACCCCGCCTCCCCGTCTTTTCCGCCACCAAAGACATCTGGCGCAACCCCAAAACGACGCCGTCTTCTCCCCCCTCTCACCCGCCCCGCCACCGCCGCAAGCTCCAAGGCACCGCGTTCCTAGACCACACCATCGACATGGACGACCTCGCCGCCTCCATCCGCGCCACCCAAAACGACCACGACCTCAACTCCCTCCTCTCCCCTTACAAATCCCGCAGCCTCTCCATCCGCTTCATGGTCTCCCTCCTCTCCCGCGAGCCCGACTGGCGCCGCTCCCTCGCCATCCTCGACTGGATCAACGACGTCGCTCTCTACACTCCCTCCGTCTTCGCCTACAACGTCGTCCTCCGCAACGTCCTCCGCGCCGGCCAGTGGGACCTCGCACACGGCCTGTTCGACGAAATGCGCCACCGGGCTCTGGCGCCGGACAGATACACTTACTCAACTCTCATCACTGCTTTCGGAAAAGCCGGCATGTTCGACGCCGCGCTGTCCTGGCTGCAGAAGATGGAGCAGGACCGAGTCTCCGGCGACCTGGTGCTCTACAGCAACTTGATTGAGCTGTCACGGAAGCTGTGTGACTACACCAAGGCGATTGCGATTTTCTCGCGGCTGAAGAGGATGGGGATAGTTCCTGATTTGGTTGCGTTTAATTCGATGATCAATGTGTTTGGTAAGGCGAAGTTGTTTAGGGAGGCGAGAGGTCTGCTCAAGGAGATGAGGGCGGTGGGTGTTGCGCCGGATACTGTGAGCTACTCGACGCTGTTGACAATGTATGTTGAGAATGAGAAGTTTTTGGAGGCGTTGGGTGTGTTTCGGGAGATGAGTGAGGTCAAGTGTGGGCTGGATATCACGACGTGTAATGTTATGATTGATGTGTATGGGCAGCTGGATATGGCGAAGGAGGCGGATAGGTTGTTTTGGAGCATGAGGAAGATGGTGATTGAGCCGAATGTTGTTAGTTACAATACTCTTTTGAGGGTTTATGGAGATGCTGAGCTTTTTGGGGAAGCCATTCATTTGTTTAGGATGATGCAGAGGATGGATGTGGAGCAGAATGTTGTCACGTACAATACGATGATTAGGATTTATGGGAAGTCGCTTGAGCATGAGAAGGCTACGAATCTTGTGCAGGAAATGCAGAAGAGGGGGATTCAACCGAATGCCATTACATACTCGACCATTATATCTATATGGGGTAGAGCTGGGAAATTGGACAGGGCAGCAATGTTGTTTCAGAAGCTGAGGAACTCCGGGGTTGAGATTGATCAGGTTCTTTATCAGACGATGATTGTATCGTATGAGAGAGTAGGTTTGGTTGCTCATGCTAAGCGCTTGCTTCATGAGCTCAAGCGCCCAGACAATATCCCAAGGGAGACTGCAATTACCATTCTTGCTAGAGCTGGTCGTGTGGAGGAGGCTACATGGGTTTTCCGTCAGGCTTTTGAGGCTGGGCAGGTGAAGGATATATCTGTGTTTGGTTGCATGATTGAGCTTTACTCAAGAAACCGGAAATATGCAAATTGCATTGAGGTGTTTGAGAATATGCGAGTGGCAGGATATTTTCCTGCTTCCCATGTGATTGGTCTAGTTCTCAACGCTTATGGAAAGTTACGGGAGTTTGAGAAGGCTGATGCTGTTTATAGGGAAATGCAGGAGGAAGGGTGTGTTTTCTCTGATGAAATTCACTTCCAAATGCTTAGTCTTTATGGTGCAAGAAAGGACTTTAAGACGGTAGAGGCAATGTTCGAGAGGCTGGTCTGCGATCCCAACATCAACAAAAAGGAGTTGCATCTTGTTGTTGCCGGCATCTATGAAAGATCAAACAGACTTAATGATTCACACCGGATCATGAACAGGATGAATGAAAGTCGAGTGTTGAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0031967 GO:0031975 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

663

Amino Acids

75.9

Weight (kDa)

9.13

Isoelectric Point (pI)

33.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	140 - 189	9.4e-14	PPR repeat family
PPR_1	PF12854	173 - 204	8.1e-06	PPR repeat
PPR	PF01535	178 - 207	1.9e-06	PPR repeat
PPR_3	PF13812	200 - 259	6.8e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	245 - 292	5.7e-11	PPR repeat family
PPR	PF01535	248 - 277	3.8e-06	PPR repeat
PPR_3	PF13812	269 - 329	1.9e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	280 - 324	7.6e-08	PPR repeat family
PPR_3	PF13812	315 - 364	3.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	316 - 362	2.5e-09	PPR repeat family
PPR_long	PF17177	339 - 500	3.7e-11	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	350 - 395	2.3e-11	PPR repeat family
TPR_24	PF23276	363 - 476	9.9e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	374 - 433	5.8e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	386 - 430	6.1e-15	PPR repeat family
PPR	PF01535	388 - 418	4.9e-07	PPR repeat
PPR_1	PF12854	416 - 447	2.9e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013505)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39980
fragaria_vesca	FvH4_6g49520
malus_domestica	MD09G1044200.v1.1
prunus_persica	Prupe.3G273600_v2.0.a1
pyrus_communis	pycom111g03450
rosa_chinensis	RchiOBHm_Chr2g0169431
rosa_laevigata	RLG00000021863
rosa_multiflora	Rmu_co8342305.1_g000001 Rmu_sc0004665.1_g000014 Rmu_sc0004665.1_g000015 Rmu_sc0006806.1_g000040
rosa_roxburghii	Rroxscaffold_2G00082130 Rroxscaffold_3G00240790
rosa_samantha	Rh2AG611300 Rh2BG624900 Rh2CG593300 Rh2DG635500
rosa_wichuraiana	Rw2G050730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1546
AatII	GACGTC	1 cut(s)	405
Acc36I	ACCTGC	1 cut(s)	1546
AccB1I	GGYRCC	3 cut(s)	206, 366, 520
AccBSI	CCGCTC	1 cut(s)	372
AccII	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
AclWI	GGATC	3 cut(s)	401, 1859, 1955
AcoI	YGGCCR	1 cut(s)	466
AcsI	RAATTY	1 cut(s)	1782
AcuI	CTGAAG	1 cut(s)	734
AcyI	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
AdeI	CACNNNGTG	1 cut(s)	957
AfaI	GTAC	2 cut(s)	9, 1169
AfeI	AGCGCT	1 cut(s)	1433
AfiI	CCNNNNNNNGG	3 cut(s)	334, 471, 517
AflIII	ACRYGT	1 cut(s)	956
AgsI	TTSAA	2 cut(s)	1256, 1981
AjiI	CACGTC	1 cut(s)	957
AjnI	CCWGG	2 cut(s)	593, 633
Alw21I	GWGCWC	2 cut(s)	642, 1449
Alw26I	GTCTC	3 cut(s)	343, 628, 1469
AlwI	GGATC	3 cut(s)	401, 1859, 1955
AlwNI	CAGNNNCTG	1 cut(s)	1342
Aor51HI	AGCGCT	1 cut(s)	1433
AoxI	GGCC	2 cut(s)	466, 487
ApeKI	GCWGC	4 cut(s)	315, 598, 985, 1322
ApoI	RAATTY	1 cut(s)	1782
ArsI	GACNNNNNNTTYG	2 cut(s)	1786, 1818
Asp700I	GAANNNNTTC	1 cut(s)	1113
AspS9I	GGNCC	2 cut(s)	475, 616
AsuC2I	CCSGG	2 cut(s)	512, 1354
AsuHPI	GGTGA	5 cut(s)	49, 73, 167, 1051, 1570
AvaII	GGWCC	2 cut(s)	475, 616
BanI	GGYRCC	3 cut(s)	206, 366, 520
BanII	GRGCYC	3 cut(s)	360, 517, 1449
BbsI	GAAGAC	2 cut(s)	153, 418
Bbv12I	GWGCWC	2 cut(s)	642, 1449
BbvCI	CCTCAGC	1 cut(s)	1343
BbvI	GCAGC	4 cut(s)	327, 585, 997, 1334
BccI	CCATC	9 cut(s)	52, 236, 263, 332, 389, 601, 715, 1030, 1135
BceAI	ACGGC	2 cut(s)	142, 502
BcgI	CGANNNNNNTGC	4 cut(s)	787, 821, 1210, 1244
BciT130I	CCWGG	2 cut(s)	595, 635
BciVI	GTATCC	1 cut(s)	835
BclI	TGATCA	2 cut(s)	759, 1366
BcnI	CCSGG	2 cut(s)	512, 1354
BcoDI	GTCTC	3 cut(s)	343, 628, 1469
BfaI	CTAG	3 cut(s)	218, 1497, 1688
BfmI	CTRYAG	2 cut(s)	599, 643
BfoI	RGCGCY	4 cut(s)	370, 524, 1435, 1456
BfuAI	ACCTGC	1 cut(s)	1546
BfuI	GTATCC	1 cut(s)	835
BglI	GCCNNNNNGGC	1 cut(s)	364
BisI	GCNGC	9 cut(s)	193, 249, 316, 370, 585, 599, 710, 986, 1323
BlpI	GCTNAGC	2 cut(s)	1095, 1428
BlsI	GCNGC	9 cut(s)	194, 250, 317, 371, 586, 600, 711, 987, 1324
Bme1390I	CCNGG	4 cut(s)	512, 595, 635, 1354
Bme18I	GGWCC	2 cut(s)	475, 616
BmgBI	CACGTC	1 cut(s)	957
BmgT120I	GGNCC	2 cut(s)	475, 616
BmiI	GGNNCC	4 cut(s)	208, 368, 476, 522
BmrFI	CCNGG	4 cut(s)	512, 595, 635, 1354
BmsI	GCATC	5 cut(s)	1081, 1122, 1723, 1900, 1917
BpiI	GAAGAC	2 cut(s)	153, 418
BplI	GAGNNNNNCTC	4 cut(s)	792, 824, 1583, 1615
Bpu10I	CCTNAGC	1 cut(s)	1343
Bpu1102I	GCTNAGC	2 cut(s)	1095, 1428
BpuEI	CTTGAG	4 cut(s)	794, 1223, 1433, 1585
BpuMI	CCSGG	2 cut(s)	512, 1354
BsaAI	YACGTR	1 cut(s)	1167
BsaHI	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
BsaI	GGTCTC	1 cut(s)	343
BsaJI	CCNNGG	4 cut(s)	202, 687, 1353, 1469
BsaWI	WCCGGW	2 cut(s)	1608, 1944
Bsc4I	CCNNNNNNNGG	3 cut(s)	334, 471, 517
Bse118I	RCCGGY	3 cut(s)	464, 569, 1904
Bse1I	ACTGG	3 cut(s)	368, 395, 469
Bse3DI	GCAATG	2 cut(s)	1332, 1848
BseBI	CCWGG	2 cut(s)	595, 635
BseDI	CCNNGG	4 cut(s)	202, 687, 1353, 1469
BseGI	GGATG	9 cut(s)	38, 255, 324, 381, 726, 1134, 1146, 1150, 1965
BseLI	CCNNNNNNNGG	3 cut(s)	334, 471, 517
BseMI	GCAATG	2 cut(s)	1332, 1848
BseMII	CTCAG	2 cut(s)	1086, 1334
BseNI	ACTGG	3 cut(s)	368, 395, 469
BseRI	GAGGAG	3 cut(s)	284, 335, 1529
BseXI	GCAGC	4 cut(s)	327, 585, 997, 1334
BseYI	CCCAGC	2 cut(s)	1304, 1550
BsgI	GTGCAG	1 cut(s)	1250
Bsh1236I	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
BshFI	GGCC	2 cut(s)	468, 489
BshNI	GGYRCC	3 cut(s)	206, 366, 520
BsiHKAI	GWGCWC	2 cut(s)	642, 1449
BslFI	GGGAC	2 cut(s)	77, 488
BslI	CCNNNNNNNGG	3 cut(s)	334, 471, 517
BsmAI	GTCTC	3 cut(s)	343, 628, 1469
BsmFI	GGGAC	2 cut(s)	77, 488
BsmI	GAATGC	1 cut(s)	1267
BsnI	GGCC	2 cut(s)	468, 489
Bso31I	GGTCTC	1 cut(s)	343
Bsp1286I	GDGCHC	4 cut(s)	360, 517, 642, 1449
Bsp143I	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
Bsp1720I	GCTNAGC	2 cut(s)	1095, 1428
BspANI	GGCC	2 cut(s)	468, 489
BspCNI	CTCAG	2 cut(s)	1087, 1335
BspFNI	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
BspHI	TCATGA	3 cut(s)	1441, 1950, 1985
BspLI	GGNNCC	4 cut(s)	208, 368, 476, 522
BspMAI	CTGCAG	1 cut(s)	603
BspMI	ACCTGC	1 cut(s)	1546
BspPI	GGATC	3 cut(s)	401, 1859, 1955
BspT107I	GGYRCC	3 cut(s)	206, 366, 520
BspTNI	GGTCTC	1 cut(s)	343
BsrBI	CCGCTC	1 cut(s)	372
BsrDI	GCAATG	2 cut(s)	1332, 1848
BsrFI	RCCGGY	3 cut(s)	464, 569, 1904
BsrI	ACTGG	3 cut(s)	368, 395, 469
BssAI	RCCGGY	3 cut(s)	464, 569, 1904
BssECI	CCNNGG	4 cut(s)	202, 687, 1353, 1469
BssMI	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
BssNI	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
BssT1I	CCWWGG	3 cut(s)	202, 687, 1469
Bst2UI	CCWGG	2 cut(s)	595, 635
Bst4CI	ACNGT	4 cut(s)	71, 91, 847, 1834
Bst6I	CTCTTC	2 cut(s)	710, 1238
BstACI	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
BstAPI	GCANNNNNTGC	1 cut(s)	1237
BstBAI	YACGTR	1 cut(s)	1167
BstC8I	GCNNGC	6 cut(s)	197, 356, 466, 571, 1436, 1906
BstDEI	CTNAG	4 cut(s)	1095, 1343, 1428, 1799
BstF5I	GGATG	9 cut(s)	38, 255, 324, 381, 726, 1134, 1146, 1150, 1965
BstFNI	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
BstH2I	RGCGCY	4 cut(s)	370, 524, 1435, 1456
BstKTI	GATC	6 cut(s)	396, 762, 1369, 1867, 1922, 1950
BstMAI	GTCTC	3 cut(s)	343, 628, 1469
BstMBI	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
BstMWI	GCNNNNNNNGC	7 cut(s)	192, 364, 595, 1004, 1237, 1444, 1547
BstNI	CCWGG	2 cut(s)	595, 635
BstNSI	RCATGY	1 cut(s)	577
BstSCI	CCNGG	4 cut(s)	510, 593, 633, 1352
BstSFI	CTRYAG	2 cut(s)	599, 643
BstUI	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
BstV1I	GCAGC	4 cut(s)	327, 585, 997, 1334
BstV2I	GAAGAC	2 cut(s)	153, 418
BstXI	CCANNNNNNTGG	2 cut(s)	235, 1682
BsuI	GTATCC	1 cut(s)	835
BsuRI	GGCC	2 cut(s)	468, 489
BtrI	CACGTC	1 cut(s)	957
BtsCI	GGATG	9 cut(s)	38, 255, 324, 381, 726, 1134, 1146, 1150, 1965
BtsI	GCAGTG	1 cut(s)	552
BtsIMutI	CAGTG	2 cut(s)	476, 552
BveI	ACCTGC	1 cut(s)	1546
Cac8I	GCNNGC	6 cut(s)	197, 356, 466, 571, 1436, 1906
CaiI	CAGNNNCTG	1 cut(s)	1342
CciI	TCATGA	3 cut(s)	1441, 1950, 1985
Cfr10I	RCCGGY	3 cut(s)	464, 569, 1904
Cfr13I	GGNCC	2 cut(s)	475, 616
CseI	GACGC	3 cut(s)	163, 590, 868
CsiI	ACCWGGT	1 cut(s)	633
Csp6I	GTAC	2 cut(s)	8, 1168
CviQI	GTAC	2 cut(s)	8, 1168
DdeI	CTNAG	4 cut(s)	1095, 1343, 1428, 1799
DinI	GGCGCC	2 cut(s)	368, 522
DpnI	GATC	6 cut(s)	395, 761, 1368, 1866, 1921, 1949
DpnII	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
DraIII	CACNNNGTG	1 cut(s)	957
EaeI	YGGCCR	1 cut(s)	466
Eam1104I	CTCTTC	2 cut(s)	710, 1238
EarI	CTCTTC	2 cut(s)	710, 1238
EciI	GGCGGA	2 cut(s)	109, 1022
Ecl136II	GAGCTC	1 cut(s)	1447
Eco130I	CCWWGG	3 cut(s)	202, 687, 1469
Eco24I	GRGCYC	3 cut(s)	360, 517, 1449
Eco31I	GGTCTC	1 cut(s)	343
Eco32I	GATATC	1 cut(s)	949
Eco47I	GGWCC	2 cut(s)	475, 616
Eco47III	AGCGCT	1 cut(s)	1433
Eco53kI	GAGCTC	1 cut(s)	1447
Eco57I	CTGAAG	1 cut(s)	734
EcoICRI	GAGCTC	1 cut(s)	1447
EcoO109I	RGGNCCY	1 cut(s)	475
EcoRII	CCWGG	2 cut(s)	593, 633
EcoRV	GATATC	1 cut(s)	949
EcoT14I	CCWWGG	3 cut(s)	202, 687, 1469
EcoT38I	GRGCYC	3 cut(s)	360, 517, 1449
EgeI	GGCGCC	2 cut(s)	368, 522
EheI	GGCGCC	2 cut(s)	368, 522
ErhI	CCWWGG	3 cut(s)	202, 687, 1469
FaqI	GGGAC	2 cut(s)	77, 488
FauI	CCCGC	5 cut(s)	110, 186, 191, 320, 359
FbaI	TGATCA	2 cut(s)	759, 1366
Fnu4HI	GCNGC	9 cut(s)	193, 249, 316, 370, 585, 599, 710, 986, 1323
FokI	GGATG	9 cut(s)	25, 242, 311, 368, 733, 1141, 1153, 1157, 1972
FriOI	GRGCYC	3 cut(s)	360, 517, 1449
Fsp4HI	GCNGC	9 cut(s)	193, 249, 316, 370, 585, 599, 710, 986, 1323
FspBI	CTAG	3 cut(s)	218, 1497, 1688
GluI	GCNGC	9 cut(s)	193, 249, 316, 370, 585, 599, 710, 986, 1323
GsaI	CCCAGC	2 cut(s)	1308, 1554
HaeII	RGCGCY	4 cut(s)	370, 524, 1435, 1456
HaeIII	GGCC	2 cut(s)	468, 489
HgaI	GACGC	3 cut(s)	163, 590, 868
Hin1I	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
HincII	GTYRAC	1 cut(s)	867
HindII	GTYRAC	1 cut(s)	867
HinfI	GANTC	4 cut(s)	621, 1222, 1252, 1937
HphI	GGTGA	5 cut(s)	49, 73, 167, 1051, 1570
Hpy166II	GTNNAC	1 cut(s)	867
Hpy188I	TCNGA	4 cut(s)	563, 1338, 1383, 1777
Hpy188III	TCNNGA	8 cut(s)	734, 917, 952, 1442, 1602, 1849, 1951, 1986
Hpy8I	GTNNAC	1 cut(s)	867
Hpy99I	CGWCG	8 cut(s)	157, 404, 407, 443, 500, 584, 862, 958
HpyAV	CCTTC	6 cut(s)	43, 994, 1207, 1555, 1720, 1754
HpyCH4III	ACNGT	4 cut(s)	71, 91, 847, 1834
HpyCH4IV	ACGT	5 cut(s)	402, 438, 453, 956, 1166
HpyF10VI	GCNNNNNNNGC	7 cut(s)	192, 364, 595, 1004, 1237, 1444, 1547
HpyF3I	CTNAG	4 cut(s)	1095, 1343, 1428, 1799
HpySE526I	ACGT	5 cut(s)	402, 438, 453, 956, 1166
Hsp92I	GRCGYC	5 cut(s)	155, 367, 402, 521, 582
KasI	GGCGCC	2 cut(s)	366, 520
KroI	GCCGGC	3 cut(s)	464, 569, 1904
KroNI	GCCGGC	3 cut(s)	466, 571, 1906
Ksp22I	TGATCA	2 cut(s)	759, 1366
Kzo9I	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
LmnI	GCTCC	5 cut(s)	204, 377, 610, 1023, 1150
Lsp1109I	GCAGC	4 cut(s)	327, 585, 997, 1334
LweI	GCATC	5 cut(s)	1081, 1122, 1723, 1900, 1917
MabI	ACCWGGT	1 cut(s)	633
MaeI	CTAG	3 cut(s)	218, 1497, 1688
MaeII	ACGT	5 cut(s)	402, 438, 453, 956, 1166
MaeIII	GTNAC	6 cut(s)	71, 663, 677, 1061, 1162, 1710
MalI	GATC	6 cut(s)	395, 761, 1368, 1866, 1921, 1949
MbiI	CCGCTC	1 cut(s)	372
MboI	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
MboII	GAAGA	6 cut(s)	153, 418, 616, 727, 1045, 1255
MhlI	GDGCHC	4 cut(s)	360, 517, 642, 1449
MluCI	AATT	5 cut(s)	751, 1310, 1482, 1621, 1782
Mly113I	GGCGCC	2 cut(s)	367, 521
MlyI	GAGTC	1 cut(s)	630
MroNI	GCCGGC	3 cut(s)	464, 569, 1904
MroXI	GAANNNNTTC	1 cut(s)	1113
MseI	TTAA	3 cut(s)	750, 1827, 1932
MslI	CAYNNNNRTG	2 cut(s)	233, 1631
MspA1I	CMGCKG	1 cut(s)	988
MspR9I	CCNGG	4 cut(s)	512, 595, 635, 1354
Mva1269I	GAATGC	1 cut(s)	1267
MvaI	CCWGG	2 cut(s)	595, 635
MvnI	CGCG	6 cut(s)	212, 261, 354, 462, 587, 709
MwoI	GCNNNNNNNGC	7 cut(s)	192, 364, 595, 1004, 1237, 1444, 1547
NaeI	GCCGGC	3 cut(s)	466, 571, 1906
NarI	GGCGCC	2 cut(s)	367, 521
NciI	CCSGG	2 cut(s)	512, 1354
NdeII	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
NgoMIV	GCCGGC	3 cut(s)	464, 569, 1904
NlaIV	GGNNCC	4 cut(s)	208, 368, 476, 522
NmuCI	GTSAC	3 cut(s)	663, 677, 1162
NspI	RCATGY	1 cut(s)	577
PagI	TCATGA	3 cut(s)	1441, 1950, 1985
PaqCI	CACCTGC	1 cut(s)	1546
PcsI	WCGNNNNNNNCGW	5 cut(s)	237, 384, 435, 492, 1172
PctI	GAATGC	1 cut(s)	1267
PdiI	GCCGGC	3 cut(s)	466, 571, 1906
PdmI	GAANNNNTTC	1 cut(s)	1113
PfeI	GAWTC	3 cut(s)	1222, 1252, 1937
PflFI	GACNNNGTC	2 cut(s)	157, 620
PkrI	GCNGC	9 cut(s)	194, 250, 317, 371, 586, 600, 711, 987, 1324
PleI	GAGTC	1 cut(s)	629
PluTI	GGCGCC	2 cut(s)	370, 524
PpsI	GAGTC	1 cut(s)	629
Ppu21I	YACGTR	1 cut(s)	1167
PpuMI	RGGWCCY	1 cut(s)	475
Psp124BI	GAGCTC	1 cut(s)	1449
Psp5II	RGGWCCY	1 cut(s)	475
Psp6I	CCWGG	2 cut(s)	593, 633
PspFI	CCCAGC	2 cut(s)	1304, 1550
PspGI	CCWGG	2 cut(s)	593, 633
PspN4I	GGNNCC	4 cut(s)	208, 368, 476, 522
PspPI	GGNCC	2 cut(s)	475, 616
PspPPI	RGGWCCY	1 cut(s)	475
PstI	CTGCAG	1 cut(s)	603
PstNI	CAGNNNCTG	1 cut(s)	1342
PsyI	GACNNNGTC	2 cut(s)	157, 620
PvuII	CAGCTG	1 cut(s)	988
RsaI	GTAC	2 cut(s)	9, 1169
RsaNI	GTAC	2 cut(s)	8, 1168
RseI	CAYNNNNRTG	2 cut(s)	233, 1631
SacI	GAGCTC	1 cut(s)	1449
SaqAI	TTAA	3 cut(s)	750, 1827, 1932
SatI	GCNGC	9 cut(s)	193, 249, 316, 370, 585, 599, 710, 986, 1323
Sau3AI	GATC	6 cut(s)	393, 759, 1366, 1864, 1919, 1947
Sau96I	GGNCC	2 cut(s)	475, 616
SchI	GAGTC	1 cut(s)	630
ScrFI	CCNGG	4 cut(s)	512, 595, 635, 1354
SduI	GDGCHC	4 cut(s)	360, 517, 642, 1449
SexAI	ACCWGGT	1 cut(s)	633
SfaNI	GCATC	5 cut(s)	1081, 1122, 1723, 1900, 1917
SfcI	CTRYAG	2 cut(s)	599, 643
SfoI	GGCGCC	2 cut(s)	368, 522
SinI	GGWCC	2 cut(s)	475, 616
SmiMI	CAYNNNNRTG	2 cut(s)	233, 1631
SmlI	CTYRAG	4 cut(s)	809, 1202, 1448, 1600
SmoI	CTYRAG	4 cut(s)	809, 1202, 1448, 1600
Sse9I	AATT	5 cut(s)	751, 1310, 1482, 1621, 1782
SspDI	GGCGCC	2 cut(s)	366, 520
SspMI	CTAG	3 cut(s)	218, 1497, 1688
SstI	GAGCTC	1 cut(s)	1449
StyD4I	CCNGG	4 cut(s)	510, 593, 633, 1352
StyI	CCWWGG	3 cut(s)	202, 687, 1469
TaaI	ACNGT	4 cut(s)	71, 91, 847, 1834
TaiI	ACGT	5 cut(s)	405, 441, 456, 959, 1169
TaqI	TCGA	9 cut(s)	231, 387, 495, 579, 755, 857, 1277, 1848, 1972
TaqII	GACCGA	1 cut(s)	633
TasI	AATT	5 cut(s)	751, 1310, 1482, 1621, 1782
TauI	GCSGC	5 cut(s)	195, 251, 372, 587, 712
TfiI	GAWTC	3 cut(s)	1222, 1252, 1937
Tru1I	TTAA	3 cut(s)	750, 1827, 1932
Tru9I	TTAA	3 cut(s)	750, 1827, 1932
TscAI	CASTG	2 cut(s)	476, 559
TseFI	GTSAC	3 cut(s)	663, 677, 1162
TseI	GCWGC	4 cut(s)	315, 598, 985, 1322
Tsp45I	GTSAC	3 cut(s)	663, 677, 1162
TspDTI	ATGAA	8 cut(s)	322, 1106, 1430, 1794, 1929, 1967, 1976, 1980
TspGWI	ACGGA	3 cut(s)	412, 682, 1523
TspRI	CASTG	2 cut(s)	476, 559
Tth111I	GACNNNGTC	2 cut(s)	157, 620
VpaK11BI	GGWCC	2 cut(s)	475, 616
XapI	RAATTY	1 cut(s)	1782
XceI	RCATGY	1 cut(s)	577
XcmI	CCANNNNNNNNNTGG	1 cut(s)	331
XmnI	GAANNNNTTC	1 cut(s)	1113
XspI	CTAG	3 cut(s)	218, 1497, 1688
ZraI	GACGTC	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.