Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006782

Physical Location & Seq

Genomic Coordinates Forward (+)

16529090 .. 16533287

Gene Structure 4198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G41315.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGCTACCGGACAAAACAGAACAACTGTGCCAGAGAATCTGAAGAAACACCTCGCAGTTTCAGTTCGAAACATTCAATGGAGTTATGGTATCTTTTGGTCTGTCTCTGCTTCTCAGTCTGGAGTTTTAGAATGGGGAGATGGATACTATAATGGAGATATCAAAACGAGGAAGACGATTCAAGCTTCGGAGATCAAAGCTGATCAGCTTGGTCTACGGAGGAGCGAGCAGCTTAGCGAGCTTTACGAGTCTCTCTCCGTCGCTGAATCTTCTTCTTCAGGCGTTGCTGCCGGATCTCAAGTCACCAGACGAGCTTCCGCCGCCGCACTTTCACCGGAAGATCTCGCCGACACCGAGTGGTACTATTTGGTTTGTATGTCTTTCGTCTTCAACATTGGTGAAGGAATGCCTGGACGGACGTTTGCAAACGGTGAACCGATATGGTTGTGCAACGCTCATACGGCGGATAGTAAAGTGTTTAGCCGTTCTCTTCTAGCAAAAAGTGCTGCGGTTAAGACAGTGGTTTGCTTCCCGTTCCTTGGAGGAGTCGTTGAGATTGGTACCACAGAACATATTACGGAAGACATGAATGTAATACAATGCGTGAAGACATCATTCCTCGAAGCCCCTGATCCGTACGCTACAATATTACCAGCAAGATCCGATTATCACATCGACAACGTTCTTGATCCGCAACAGATTCTAGGCGACGAGATTTACGCGCCTATGTTCAGTACGGAGCCTTTTCCAACAGCTTCTCCGAGCAGAACTACCAACGGTTTCGATCAAGAACATGAACAAGTAGCAGATGATCATGATTCTTTCATGACCGAAAGAATCACTGGAGGAGCTTCTCAGGTGCAAAGCTGGCAGCTCATGGACGACGAGCTTAGTAACTGCGTTCACCAGTCGCTAAATTCCAGCGATTGCGTCTCTCAAACGTTTGTTGAAGGGGCGGCTGGACGGGTTGCTTACGGTGCAAGAAAGAGTAGAGTTCAAAGACTAGGGCAAATTCAAGAGCAACAGAGAAATGTGAAGACATTGTCATTTGATCCAAGAAACGACGACGTTCATTACCAAAGTGTGATCTCAACGATTTTTAAGACCAACCATCAGTTAATTCTCGGACCGCAGTTTCGAAACTGCGATAAACAGTCAAGCTTCACTAGGTGGAAGAAATCATCGTCATCATCATCAGGAACCGCCACGGTCACGGCACCATCACAAGGAATGTTAAAGAAAATTATTTTCGATGTTCCGCGAGTGCACCAGAAAGAGAAGTTAATGTTGGACTCACCAGAAGCCAGAGATGAAACTGGGAACCATGCGGTTTTAGAGAAGAAGCGCCGCGAGAAATTGAACGAACGGTTCATGACCTTGAGAAAAATCATTCCGTCAATCAACAAGATCGATAAAGTATCGATTCTTGACGATACGATAGAGTATCTTCAAGAACTCGAGAGACGGGTTCAAGAACTAGAATCTTGCAGAGAATCAACCGATACAGAGACTCGTGGGACGATGACGATGAAGAGGAAGAAACCATGCGACGCAGGAGAAAGAACATCAGCTAATTGCGCAAATAATGAAACAGGAAATGGGAAGAAGGTGTCGGTTAACAATGTTGGTGAAGCCGAGCCAGCAGATACCGGTTTTACTGGTTTAACCGATAATTTAAGGATCGGTTCGTTTGGTAATGAGGTGGTTATTGAGCTTAGATGTGCTTGGAGAGAAGGAGTATTGCTTGAGATAATGGATGTGATTAGTGATCTCCATTTGGATTCTCATTCGGTTCAATCCTCGACCGGAGACGGTTTGCTCTGCTTAACCGTCAATTGCAAGCACAAGGGGTCAAAAATAGCGACACCAGGAATGATCAAAGAAGCACTTCAAAGGGTTGCATGGATCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0001101 GO:0001708 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0008544 GO:0009653 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009913 GO:0009957 GO:0009962 GO:0009963 GO:0009987 GO:0010026 GO:0010033 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0031540 GO:0031542 GO:0032502 GO:0032870 GO:0032989 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048468 GO:0048518 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060429 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

637

Amino Acids

70.54

Weight (kDa)

5.72

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	14 - 206	1.6e-51	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	441 - 487	7.5e-13	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	563 - 634	9.6e-18	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63650 AT1G63650 AT1G63650 AT5G41315 AT5G41315 AT5G41315
fragaria_vesca	FvH4_5g02520
malus_domestica	MD06G1084400.v1.1 MD14G1105500.v1.1
prunus_persica	Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1
pyrus_communis	pycom06g08070 pycom14g10100
rosa_chinensis	RchiOBHm_Chr7g0197531
rosa_laevigata	RLG00000003927
rosa_multiflora	Rmu_sc0007007.1_g000003
rosa_roxburghii	Rroxscaffold_3G00258370
rosa_rugosa	Rorug07G0040800
rosa_samantha	Rh1AG185600 Rh1CG171400 Rh7AG165700 Rh7BG167700 Rh7CG174100 Rh7DG167100
rosa_wichuraiana	Rw7G014420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1579
Acc65I	GGTACC	1 cut(s)	560
AccB1I	GGYRCC	2 cut(s)	560, 1216
AccI	GTMKAC	1 cut(s)	214
AccII	CGCG	3 cut(s)	722, 1261, 1350
AclI	AACGTT	2 cut(s)	681, 941
AclWI	GGATC	7 cut(s)	301, 626, 654, 683, 1046, 1688, 1913
AcsI	RAATTY	2 cut(s)	916, 1011
AcuI	CTGAAG	2 cut(s)	62, 261
AdeI	CACNNNGTG	2 cut(s)	357, 1170
AfaI	GTAC	4 cut(s)	362, 562, 638, 736
AfiI	CCNNNNNNNGG	2 cut(s)	539, 1226
AgeI	ACCGGT	1 cut(s)	1649
AjnI	CCWGG	2 cut(s)	409, 1867
AjuI	GAANNNNNNNTTGG	2 cut(s)	1271, 1303
Alw21I	GWGCWC	1 cut(s)	1269
Alw26I	GTCTC	6 cut(s)	109, 255, 937, 1456, 1502, 1803
Alw44I	GTGCAC	1 cut(s)	1265
AlwI	GGATC	7 cut(s)	301, 626, 654, 683, 1046, 1688, 1913
Ama87I	CYCGRG	1 cut(s)	1457
ApaLI	GTGCAC	1 cut(s)	1265
ApeKI	GCWGC	4 cut(s)	229, 287, 506, 871
ApoI	RAATTY	2 cut(s)	916, 1011
ArsI	GACNNNNNNTTYG	2 cut(s)	1119, 1151
AsiGI	ACCGGT	1 cut(s)	1649
Asp700I	GAANNNNTTC	1 cut(s)	1887
Asp718I	GGTACC	1 cut(s)	560
AspLEI	GCGC	3 cut(s)	724, 1347, 1580
AspS9I	GGNCC	1 cut(s)	1127
AsuHPI	GGTGA	7 cut(s)	295, 324, 410, 443, 896, 1287, 1640
AsuII	TTCGAA	2 cut(s)	67, 1138
AvaI	CYCGRG	1 cut(s)	1457
AvaII	GGWCC	1 cut(s)	1127
BaeGI	GKGCMC	1 cut(s)	1269
BanI	GGYRCC	2 cut(s)	560, 1216
BauI	CACGAG	1 cut(s)	1512
BbsI	GAAGAC	5 cut(s)	179, 379, 588, 614, 1043
Bbv12I	GWGCWC	1 cut(s)	1269
BbvI	GCAGC	4 cut(s)	241, 274, 493, 883
BccI	CCATC	3 cut(s)	134, 1119, 1228
BceAI	ACGGC	3 cut(s)	468, 477, 1230
BciT130I	CCWGG	2 cut(s)	411, 1869
BciVI	GTATCC	1 cut(s)	137
BclI	TGATCA	3 cut(s)	202, 811, 1875
BcoDI	GTCTC	6 cut(s)	109, 255, 937, 1456, 1502, 1803
BfaI	CTAG	5 cut(s)	494, 704, 1004, 1167, 1478
BfoI	RGCGCY	1 cut(s)	1348
BfuI	GTATCC	1 cut(s)	137
BglII	AGATCT	1 cut(s)	340
BisI	GCNGC	8 cut(s)	230, 288, 321, 324, 507, 872, 957, 1348
BlpI	GCTNAGC	1 cut(s)	233
BlsI	GCNGC	8 cut(s)	231, 289, 322, 325, 508, 873, 958, 1349
Bme1390I	CCNGG	2 cut(s)	411, 1869
Bme18I	GGWCC	1 cut(s)	1127
BmeT110I	CYCGRG	1 cut(s)	1457
BmgT120I	GGNCC	1 cut(s)	1127
BmiI	GGNNCC	5 cut(s)	562, 741, 1201, 1218, 1322
BmrFI	CCNGG	2 cut(s)	411, 1869
BmrI	ACTGGG	1 cut(s)	1326
BmuI	ACTGGG	1 cut(s)	1326
BpiI	GAAGAC	5 cut(s)	179, 379, 588, 614, 1043
BplI	GAGNNNNNCTC	2 cut(s)	239, 271
BpmI	CTGGAG	2 cut(s)	141, 864
Bpu1102I	GCTNAGC	1 cut(s)	233
Bpu14I	TTCGAA	2 cut(s)	67, 1138
BpuEI	CTTGAG	3 cut(s)	282, 1399, 1766
Bsa29I	ATCGAT	2 cut(s)	1410, 1421
BsaJI	CCNNGG	2 cut(s)	538, 1206
BsaWI	WCCGGW	4 cut(s)	8, 334, 1649, 1805
BsaXI	ACNNNNNCTCC	6 cut(s)	73, 103, 534, 564, 742, 772
Bsc4I	CCNNNNNNNGG	2 cut(s)	539, 1226
Bse118I	RCCGGY	1 cut(s)	1649
Bse1I	ACTGG	4 cut(s)	847, 907, 1321, 1663
BseBI	CCWGG	2 cut(s)	411, 1869
BseCI	ATCGAT	2 cut(s)	1410, 1421
BseDI	CCNNGG	2 cut(s)	538, 1206
BseGI	GGATG	1 cut(s)	1762
BseLI	CCNNNNNNNGG	2 cut(s)	539, 1226
BseMII	CTCAG	2 cut(s)	128, 869
BseNI	ACTGG	4 cut(s)	847, 907, 1321, 1663
BseRI	GAGGAG	3 cut(s)	235, 558, 861
BseSI	GKGCMC	1 cut(s)	1269
BseXI	GCAGC	4 cut(s)	241, 274, 493, 883
Bsh1236I	CGCG	3 cut(s)	722, 1261, 1350
Bsh1285I	CGRYCG	1 cut(s)	1806
BshNI	GGYRCC	2 cut(s)	560, 1216
BshTI	ACCGGT	1 cut(s)	1649
BshVI	ATCGAT	2 cut(s)	1410, 1421
BsiEI	CGRYCG	1 cut(s)	1806
BsiHKAI	GWGCWC	1 cut(s)	1269
BsiHKCI	CYCGRG	1 cut(s)	1457
BsiSI	CCGG	5 cut(s)	9, 291, 335, 1650, 1806
BsiWI	CGTACG	1 cut(s)	636
BslFI	GGGAC	1 cut(s)	1531
BslI	CCNNNNNNNGG	2 cut(s)	539, 1226
BsmAI	GTCTC	6 cut(s)	109, 255, 937, 1456, 1502, 1803
BsmBI	CGTCTC	3 cut(s)	937, 1456, 1803
BsmFI	GGGAC	1 cut(s)	1531
BsmI	GAATGC	1 cut(s)	411
BsoBI	CYCGRG	1 cut(s)	1457
Bsp119I	TTCGAA	2 cut(s)	67, 1138
Bsp1286I	GDGCHC	1 cut(s)	1269
Bsp1720I	GCTNAGC	1 cut(s)	233
BspCNI	CTCAG	2 cut(s)	127, 868
BspDI	ATCGAT	2 cut(s)	1410, 1421
BspFNI	CGCG	3 cut(s)	722, 1261, 1350
BspHI	TCATGA	3 cut(s)	814, 825, 1371
BspLI	GGNNCC	5 cut(s)	562, 741, 1201, 1218, 1322
BspPI	GGATC	7 cut(s)	301, 626, 654, 683, 1046, 1688, 1913
BspT104I	TTCGAA	2 cut(s)	67, 1138
BspT107I	GGYRCC	2 cut(s)	560, 1216
BsrFI	RCCGGY	1 cut(s)	1649
BsrI	ACTGG	4 cut(s)	847, 907, 1321, 1663
BssAI	RCCGGY	1 cut(s)	1649
BssECI	CCNNGG	2 cut(s)	538, 1206
BssSI	CACGAG	1 cut(s)	1512
BssT1I	CCWWGG	1 cut(s)	538
Bst2BI	CACGAG	1 cut(s)	1512
Bst2UI	CCWGG	2 cut(s)	411, 1869
Bst6I	CTCTTC	2 cut(s)	495, 1526
BstAPI	GCANNNNNTGC	1 cut(s)	503
BstBI	TTCGAA	2 cut(s)	67, 1138
BstC8I	GCNNGC	5 cut(s)	227, 239, 869, 1641, 1841
BstDEI	CTNAG	5 cut(s)	114, 233, 855, 890, 1715
BstDSI	CCRYGG	1 cut(s)	1206
BstF5I	GGATG	1 cut(s)	1762
BstFNI	CGCG	3 cut(s)	722, 1261, 1350
BstH2I	RGCGCY	1 cut(s)	1348
BstHHI	GCGC	3 cut(s)	724, 1347, 1580
BstMAI	GTCTC	6 cut(s)	109, 255, 937, 1456, 1502, 1803
BstMCI	CGRYCG	1 cut(s)	1806
BstMWI	GCNNNNNNNGC	8 cut(s)	238, 320, 461, 503, 868, 977, 1577, 1640
BstNI	CCWGG	2 cut(s)	411, 1869
BstSCI	CCNGG	2 cut(s)	409, 1867
BstSLI	GKGCMC	1 cut(s)	1269
BstUI	CGCG	3 cut(s)	722, 1261, 1350
BstV1I	GCAGC	4 cut(s)	241, 274, 493, 883
BstV2I	GAAGAC	5 cut(s)	179, 379, 588, 614, 1043
BstX2I	RGATCY	4 cut(s)	293, 340, 659, 1905
BstYI	RGATCY	4 cut(s)	293, 340, 659, 1905
Bsu15I	ATCGAT	2 cut(s)	1410, 1421
BsuI	GTATCC	1 cut(s)	137
BsuTUI	ATCGAT	2 cut(s)	1410, 1421
BtgI	CCRYGG	1 cut(s)	1206
BtsCI	GGATG	1 cut(s)	1762
BtsIMutI	CAGTG	2 cut(s)	525, 840
Cac8I	GCNNGC	5 cut(s)	227, 239, 869, 1641, 1841
CciI	TCATGA	3 cut(s)	814, 825, 1371
CfoI	GCGC	3 cut(s)	724, 1347, 1580
Cfr10I	RCCGGY	1 cut(s)	1649
Cfr13I	GGNCC	1 cut(s)	1127
ClaI	ATCGAT	2 cut(s)	1410, 1421
CpoI	CGGWCCG	1 cut(s)	1127
CseI	GACGC	2 cut(s)	919, 1559
Csp6I	GTAC	4 cut(s)	361, 561, 637, 735
CspAI	ACCGGT	1 cut(s)	1649
CspI	CGGWCCG	1 cut(s)	1127
CviAII	CATG	9 cut(s)	586, 794, 815, 826, 877, 1325, 1372, 1545, 1902
CviQI	GTAC	4 cut(s)	361, 561, 637, 735
DdeI	CTNAG	5 cut(s)	114, 233, 855, 890, 1715
DraIII	CACNNNGTG	2 cut(s)	357, 1170
Eam1104I	CTCTTC	2 cut(s)	495, 1526
EarI	CTCTTC	2 cut(s)	495, 1526
EciI	GGCGGA	2 cut(s)	307, 479
Eco130I	CCWWGG	1 cut(s)	538
Eco32I	GATATC	1 cut(s)	160
Eco47I	GGWCC	1 cut(s)	1127
Eco57I	CTGAAG	2 cut(s)	62, 261
Eco88I	CYCGRG	1 cut(s)	1457
EcoRII	CCWGG	2 cut(s)	409, 1867
EcoRV	GATATC	1 cut(s)	160
EcoT14I	CCWWGG	1 cut(s)	538
ErhI	CCWWGG	1 cut(s)	538
Esp3I	CGTCTC	3 cut(s)	937, 1456, 1803
FaeI	CATG	9 cut(s)	589, 797, 818, 829, 880, 1328, 1375, 1548, 1905
FalI	AAGNNNNNCTT	2 cut(s)	1872, 1904
FaqI	GGGAC	1 cut(s)	1531
FatI	CATG	9 cut(s)	585, 793, 814, 825, 876, 1324, 1371, 1544, 1901
FbaI	TGATCA	3 cut(s)	202, 811, 1875
FblI	GTMKAC	1 cut(s)	214
Fnu4HI	GCNGC	8 cut(s)	230, 288, 321, 324, 507, 872, 957, 1348
FokI	GGATG	1 cut(s)	1769
Fsp4HI	GCNGC	8 cut(s)	230, 288, 321, 324, 507, 872, 957, 1348
FspBI	CTAG	5 cut(s)	494, 704, 1004, 1167, 1478
FspI	TGCGCA	1 cut(s)	1579
GlaI	GCGC	3 cut(s)	723, 1346, 1579
GluI	GCNGC	8 cut(s)	230, 288, 321, 324, 507, 872, 957, 1348
GsuI	CTGGAG	2 cut(s)	141, 864
HaeII	RGCGCY	1 cut(s)	1348
HapII	CCGG	5 cut(s)	9, 291, 335, 1650, 1806
HgaI	GACGC	2 cut(s)	919, 1559
HhaI	GCGC	3 cut(s)	724, 1347, 1580
Hin1II	CATG	9 cut(s)	589, 797, 818, 829, 880, 1328, 1375, 1548, 1905
Hin6I	GCGC	3 cut(s)	722, 1345, 1578
HinP1I	GCGC	3 cut(s)	722, 1345, 1578
HincII	GTYRAC	1 cut(s)	1618
HindII	GTYRAC	1 cut(s)	1618
HindIII	AAGCTT	2 cut(s)	183, 1159
HpaI	GTTAAC	1 cut(s)	1618
HpaII	CCGG	5 cut(s)	9, 291, 335, 1650, 1806
HphI	GGTGA	7 cut(s)	295, 324, 410, 443, 896, 1287, 1640
Hpy166II	GTNNAC	5 cut(s)	215, 434, 904, 1267, 1618
Hpy188I	TCNGA	5 cut(s)	42, 190, 664, 762, 1127
Hpy8I	GTNNAC	5 cut(s)	215, 434, 904, 1267, 1618
Hpy99I	CGWCG	6 cut(s)	263, 713, 887, 1067, 1070, 1553
HpyAV	CCTTC	4 cut(s)	395, 944, 1600, 1727
HpyCH4IV	ACGT	4 cut(s)	419, 681, 941, 1068
HpyCH4V	TGCA	8 cut(s)	425, 450, 862, 980, 1267, 1488, 1839, 1901
HpyF10VI	GCNNNNNNNGC	8 cut(s)	238, 320, 461, 503, 868, 977, 1577, 1640
HpyF3I	CTNAG	5 cut(s)	114, 233, 855, 890, 1715
HpySE526I	ACGT	4 cut(s)	419, 681, 941, 1068
Hsp92II	CATG	9 cut(s)	589, 797, 818, 829, 880, 1328, 1375, 1548, 1905
HspAI	GCGC	3 cut(s)	722, 1345, 1578
KpnI	GGTACC	1 cut(s)	564
Ksp22I	TGATCA	3 cut(s)	202, 811, 1875
KspAI	GTTAAC	1 cut(s)	1618
LmnI	GCTCC	3 cut(s)	222, 739, 848
Lsp1109I	GCAGC	4 cut(s)	241, 274, 493, 883
MaeI	CTAG	5 cut(s)	494, 704, 1004, 1167, 1478
MaeII	ACGT	4 cut(s)	419, 681, 941, 1068
MaeIII	GTNAC	3 cut(s)	301, 893, 1210
MfeI	CAATTG	1 cut(s)	1834
MflI	RGATCY	4 cut(s)	293, 340, 659, 1905
MhlI	GDGCHC	1 cut(s)	1269
MluCI	AATT	8 cut(s)	916, 1011, 1119, 1242, 1355, 1573, 1672, 1834
MlyI	GAGTC	4 cut(s)	257, 555, 1286, 1504
MmeI	TCCRAC	2 cut(s)	773, 1269
MnlI	CCTC	9 cut(s)	62, 162, 213, 536, 629, 839, 1527, 1693, 1810
MroXI	GAANNNNTTC	1 cut(s)	1887
MseI	TTAA	9 cut(s)	513, 1101, 1118, 1235, 1283, 1617, 1664, 1676, 1826
MspI	CCGG	5 cut(s)	9, 291, 335, 1650, 1806
MspR9I	CCNGG	2 cut(s)	411, 1869
MunI	CAATTG	1 cut(s)	1834
Mva1269I	GAATGC	1 cut(s)	411
MvaI	CCWGG	2 cut(s)	411, 1869
MvnI	CGCG	3 cut(s)	722, 1261, 1350
MwoI	GCNNNNNNNGC	8 cut(s)	238, 320, 461, 503, 868, 977, 1577, 1640
NlaIII	CATG	9 cut(s)	589, 797, 818, 829, 880, 1328, 1375, 1548, 1905
NlaIV	GGNNCC	5 cut(s)	562, 741, 1201, 1218, 1322
NmeAIII	GCCGAG	1 cut(s)	1660
NmuCI	GTSAC	2 cut(s)	301, 1210
NsbI	TGCGCA	1 cut(s)	1579
NspV	TTCGAA	2 cut(s)	67, 1138
PaeR7I	CTCGAG	1 cut(s)	1457
PagI	TCATGA	3 cut(s)	814, 825, 1371
PcsI	WCGNNNNNNNCGW	2 cut(s)	173, 351
PctI	GAATGC	1 cut(s)	411
PdmI	GAANNNNTTC	1 cut(s)	1887
Pfl23II	CGTACG	1 cut(s)	636
PflFI	GACNNNGTC	1 cut(s)	1042
PinAI	ACCGGT	1 cut(s)	1649
PkrI	GCNGC	8 cut(s)	231, 289, 322, 325, 508, 873, 958, 1349
PleI	GAGTC	4 cut(s)	256, 554, 1286, 1504
PpsI	GAGTC	4 cut(s)	256, 554, 1286, 1504
Psp1406I	AACGTT	2 cut(s)	681, 941
Psp6I	CCWGG	2 cut(s)	409, 1867
PspGI	CCWGG	2 cut(s)	409, 1867
PspLI	CGTACG	1 cut(s)	636
PspN4I	GGNNCC	5 cut(s)	562, 741, 1201, 1218, 1322
PspPI	GGNCC	1 cut(s)	1127
PsuI	RGATCY	4 cut(s)	293, 340, 659, 1905
PsyI	GACNNNGTC	1 cut(s)	1042
RsaI	GTAC	4 cut(s)	362, 562, 638, 736
RsaNI	GTAC	4 cut(s)	361, 561, 637, 735
Rsr2I	CGGWCCG	1 cut(s)	1127
RsrII	CGGWCCG	1 cut(s)	1127
SaqAI	TTAA	9 cut(s)	513, 1101, 1118, 1235, 1283, 1617, 1664, 1676, 1826
SatI	GCNGC	8 cut(s)	230, 288, 321, 324, 507, 872, 957, 1348
Sau96I	GGNCC	1 cut(s)	1127
SchI	GAGTC	4 cut(s)	257, 555, 1286, 1504
ScrFI	CCNGG	2 cut(s)	411, 1869
SduI	GDGCHC	1 cut(s)	1269
Sfr274I	CTCGAG	1 cut(s)	1457
SfuI	TTCGAA	2 cut(s)	67, 1138
SinI	GGWCC	1 cut(s)	1127
SlaI	CTCGAG	1 cut(s)	1457
SmlI	CTYRAG	4 cut(s)	297, 1378, 1457, 1745
SmoI	CTYRAG	4 cut(s)	297, 1378, 1457, 1745
Sse9I	AATT	8 cut(s)	916, 1011, 1119, 1242, 1355, 1573, 1672, 1834
SspI	AATATT	1 cut(s)	648
SspMI	CTAG	5 cut(s)	494, 704, 1004, 1167, 1478
StyD4I	CCNGG	2 cut(s)	409, 1867
StyI	CCWWGG	1 cut(s)	538
TaiI	ACGT	4 cut(s)	422, 684, 944, 1071
TaqII	GACCGA	1 cut(s)	845
TasI	AATT	8 cut(s)	916, 1011, 1119, 1242, 1355, 1573, 1672, 1834
TauI	GCSGC	4 cut(s)	323, 326, 959, 1350
Tru1I	TTAA	9 cut(s)	513, 1101, 1118, 1235, 1283, 1617, 1664, 1676, 1826
Tru9I	TTAA	9 cut(s)	513, 1101, 1118, 1235, 1283, 1617, 1664, 1676, 1826
TscAI	CASTG	2 cut(s)	525, 847
TseFI	GTSAC	2 cut(s)	301, 1210
TseI	GCWGC	4 cut(s)	229, 287, 506, 871
Tsp45I	GTSAC	2 cut(s)	301, 1210
TspDTI	ATGAA	8 cut(s)	602, 810, 814, 1061, 1326, 1360, 1544, 1602
TspGWI	ACGGA	7 cut(s)	232, 247, 430, 593, 624, 752, 1383
TspRI	CASTG	2 cut(s)	525, 847
Tth111I	GACNNNGTC	1 cut(s)	1042
VneI	GTGCAC	1 cut(s)	1265
VpaK11BI	GGWCC	1 cut(s)	1127
XapI	RAATTY	2 cut(s)	916, 1011
XhoI	CTCGAG	1 cut(s)	1457
XmiI	GTMKAC	1 cut(s)	214
XmnI	GAANNNNTTC	1 cut(s)	1887
XspI	CTAG	5 cut(s)	494, 704, 1004, 1167, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.