Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006782

Physical Location & Seq

Genomic Coordinates Reverse (-)

2868559 .. 2870570

Gene Structure 2012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0040800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGCCTCCATTGCTCTCAAGTCCTTCGTCGGCCTCCGCCAATCCACCCTCGAAAACCCCAGCTTCACCTCCCAGTCAAAGCCCATTTCCTCATTCCCATCATCACCGCGCACTTTCCGCGTCCTCGCTGCGAAAACCAGCCCCAAAGTAGCTGGCCGCAACCTCCGCGTCGCCGTCATCGGCGGCGGCCCAGCAGGCGGCGCCGCCGCAGAGACGCTGGCGAAGGGCGGAGTCGAGACTTTTCTGATTGAGCGGAAAATGGACAACTGCAAGCCCTGCGGCGGAGCTATCCCGCTCTGCATGGTGGGGGAGTTTGACCTGCCGTTGGATATCATTGACCGGAGAGTCACCAAGATGAAGATGATATCGCCGTCGAATGTGGCGGTGGATATCGGGCAGACGCTGAAGCCGCACGAGTACATTGGGATGGTGCGGCGAGAAGTGCTGGATAATTACCTGAGGAACAGGGCTAGTGAGAATGGGGCGAGTGTGATTAATGGGTTGTTTTTGAAGATGGATAGTCCGAGTCAGGGGGACGGGACCTCGCCGTATGTGTTGCATTATACTGAGTATGACGGCAAGGCCGGCGGGGTTGGTGTGAAGAAGACTTTGGAGGTTGATGCTGTGATTGGAGCTGATGGGGCTAATTCCAGAGTGGCTAAGTCCATTGATGCCGGTGATTATGAGTACGCGATTGCGTTTCAGGAGAGGATCAAGATCCCTGATGACAAAATGGTGTACTACGAGAACTTGGCAGAGATGTATGTAGGTGATGATGTCTCGCCAGACTTTTACGGGTGGGTGTTCCCCAAGTGTGATCATGTTGCAGTTGGAACAGGTACTGTGACTCACAAAGGAGACATCAAGAAGTTCCAGCTAGCAACAAGAAACCGAGCCAAGGACAAGATTTTAGGCGGAAAGATTCTACGAGTGGAGGCACATCCGATCCCTGAACACCCCCGCCCAAGAAGGCTAGCCGGGAGAGTAGCACTGGTCGGTGATGCAGCCGGGTATGTCACCAAATGCTCGGGTGAAGGTATCTACTTTGCAGCAAAGAGTGGAAGGATGTGTGCCGAGGCCATTGTTGAGGGATCAGAGAATGGGAAGAGGATGATAAACGAAGGGGACTTGAGGAACTATTTGGAGAAGTGGGACAAGACTTACTGGCCGACTTACAAGGTGCTCGATATCTTGCAGAAGGTGTTTTACAGGTCGAACCCGGCGAGAGAAGCGTTTGTGGAGATGTGTGCAGATGAGTATGTGCAGAAGATGACCTTTGATAGTTATTTGTACAAAAGGGTGGTGCCTGGGAACCCATGGGAGGATTTGAAGTTGGCTGTGAATACCATTGGGAGCTTGGTTAGGGCTAATGCACTTAAGCAAGAGATGGAAAAAATCAGTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0001101 GO:0001708 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0008544 GO:0009653 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009913 GO:0009957 GO:0009962 GO:0009963 GO:0009987 GO:0010026 GO:0010033 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0031540 GO:0031542 GO:0032502 GO:0032870 GO:0032989 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048468 GO:0048518 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060429 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

468

Amino Acids

51.38

Weight (kDa)

8.88

Isoelectric Point (pI)

39.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63650 AT1G63650 AT1G63650 AT5G41315 AT5G41315 AT5G41315
fragaria_vesca	FvH4_5g02520
malus_domestica	MD06G1084400.v1.1 MD14G1105500.v1.1
prunus_persica	Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1
pyrus_communis	pycom06g08070 pycom14g10100
rosa_chinensis	RchiOBHm_Chr7g0197531
rosa_laevigata	RLG00000003927
rosa_multiflora	Rmu_sc0007007.1_g000003
rosa_roxburghii	Rroxscaffold_3G00258370
rosa_rugosa	Rorug07G0040800
rosa_samantha	Rh1AG185600 Rh1CG171400 Rh7AG165700 Rh7BG167700 Rh7CG174100 Rh7DG167100
rosa_wichuraiana	Rw7G014420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	344
Acc36I	ACCTGC	1 cut(s)	327
AccB1I	GGYRCC	2 cut(s)	200, 1303
AccBSI	CCGCTC	2 cut(s)	253, 295
AccII	CGCG	4 cut(s)	109, 120, 168, 692
AclWI	GGATC	4 cut(s)	712, 719, 940, 1099
AcoI	YGGCCR	2 cut(s)	154, 1166
AcuI	CTGAAG	1 cut(s)	425
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	5 cut(s)	419, 689, 740, 841, 1292
AfiI	CCNNNNNNNGG	6 cut(s)	197, 281, 325, 530, 898, 1321
AflII	CTTAAG	1 cut(s)	1376
AgsI	TTSAA	2 cut(s)	511, 1330
AjnI	CCWGG	1 cut(s)	1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	593, 625
AluBI	AGCT	6 cut(s)	63, 152, 287, 635, 877, 1356
AluI	AGCT	6 cut(s)	63, 152, 287, 635, 877, 1356
Alw21I	GWGCWC	1 cut(s)	1185
Alw26I	GTCTC	4 cut(s)	206, 230, 784, 852
AlwI	GGATC	4 cut(s)	712, 719, 940, 1099
AlwNI	CAGNNNCTG	2 cut(s)	403, 842
Ama87I	CYCGRG	1 cut(s)	1027
AoxI	GGCC	7 cut(s)	3, 31, 154, 187, 582, 1077, 1166
ApeKI	GCWGC	3 cut(s)	128, 1004, 1049
AseI	ATTAAT	1 cut(s)	495
AspLEI	GCGC	2 cut(s)	111, 203
AspS9I	GGNCC	2 cut(s)	188, 540
AsuC2I	CCSGG	3 cut(s)	979, 1009, 1220
AsuHPI	GGTGA	8 cut(s)	58, 96, 340, 689, 782, 1009, 1010, 1043
AsuNHI	GCTAGC	2 cut(s)	877, 973
AvaI	CYCGRG	1 cut(s)	1027
AvaII	GGWCC	1 cut(s)	540
AxyI	CCTNAGG	1 cut(s)	458
BanI	GGYRCC	2 cut(s)	200, 1303
BarI	GAAGNNNNNNTAC	2 cut(s)	1190, 1222
BauI	CACGAG	1 cut(s)	413
BbsI	GAAGAC	1 cut(s)	611
Bbv12I	GWGCWC	1 cut(s)	1185
BbvI	GCAGC	3 cut(s)	115, 1016, 1061
BccI	CCATC	5 cut(s)	106, 421, 508, 632, 1381
BceAI	ACGGC	5 cut(s)	158, 307, 355, 532, 592
BciT130I	CCWGG	1 cut(s)	1308
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	3 cut(s)	979, 1009, 1220
BcoDI	GTCTC	4 cut(s)	206, 230, 784, 852
BfaI	CTAG	4 cut(s)	471, 878, 974, 1405
BfoI	RGCGCY	1 cut(s)	204
BfrI	CTTAAG	1 cut(s)	1376
BfuAI	ACCTGC	1 cut(s)	327
BglI	GCCNNNNNGGC	1 cut(s)	195
Bme1390I	CCNGG	4 cut(s)	979, 1009, 1220, 1308
Bme18I	GGWCC	1 cut(s)	540
BmeT110I	CYCGRG	1 cut(s)	1027
BmgT120I	GGNCC	2 cut(s)	188, 540
BmiI	GGNNCC	4 cut(s)	202, 541, 1305, 1313
BmrFI	CCNGG	4 cut(s)	979, 1009, 1220, 1308
BmrI	ACTGGG	1 cut(s)	67
BmsI	GCATC	3 cut(s)	610, 661, 991
BmtI	GCTAGC	2 cut(s)	881, 977
BmuI	ACTGGG	1 cut(s)	67
BpiI	GAAGAC	1 cut(s)	611
BpuEI	CTTGAG	1 cut(s)	1150
BpuMI	CCSGG	3 cut(s)	979, 1009, 1220
BsaBI	GATNNNNATC	1 cut(s)	716
BsaHI	GRCGYC	1 cut(s)	201
BsaJI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BsaWI	WCCGGW	1 cut(s)	339
Bsc4I	CCNNNNNNNGG	6 cut(s)	197, 281, 325, 530, 898, 1321
Bse118I	RCCGGY	2 cut(s)	584, 674
Bse1I	ACTGG	3 cut(s)	73, 996, 1169
Bse21I	CCTNAGG	1 cut(s)	458
Bse3DI	GCAATG	1 cut(s)	9
Bse8I	GATNNNNATC	1 cut(s)	716
BseBI	CCWGG	1 cut(s)	1308
BseDI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BseGI	GGATG	4 cut(s)	432, 940, 1071, 1116
BseJI	GATNNNNATC	1 cut(s)	716
BseLI	CCNNNNNNNGG	6 cut(s)	197, 281, 325, 530, 898, 1321
BseMI	GCAATG	1 cut(s)	9
BseMII	CTCAG	2 cut(s)	449, 558
BseNI	ACTGG	3 cut(s)	73, 996, 1169
BseXI	GCAGC	3 cut(s)	115, 1016, 1061
BseYI	CCCAGC	2 cut(s)	59, 190
BsgI	GTGCAG	2 cut(s)	1269, 1283
Bsh1236I	CGCG	4 cut(s)	109, 120, 168, 692
BshFI	GGCC	7 cut(s)	5, 33, 156, 189, 584, 1079, 1168
BshNI	GGYRCC	2 cut(s)	200, 1303
BsiHKAI	GWGCWC	1 cut(s)	1185
BsiHKCI	CYCGRG	1 cut(s)	1027
BsiSI	CCGG	6 cut(s)	340, 585, 675, 978, 1008, 1220
BslFI	GGGAC	4 cut(s)	548, 553, 1139, 1166
BslI	CCNNNNNNNGG	6 cut(s)	197, 281, 325, 530, 898, 1321
BsmAI	GTCTC	4 cut(s)	206, 230, 784, 852
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	4 cut(s)	548, 553, 1139, 1166
BsnI	GGCC	7 cut(s)	5, 33, 156, 189, 584, 1079, 1168
BsoBI	CYCGRG	1 cut(s)	1027
Bsp1286I	GDGCHC	1 cut(s)	1185
Bsp1407I	TGTACA	1 cut(s)	1290
Bsp143I	GATC	5 cut(s)	711, 717, 817, 945, 1091
Bsp19I	CCATGG	1 cut(s)	1316
BspANI	GGCC	7 cut(s)	5, 33, 156, 189, 584, 1079, 1168
BspCNI	CTCAG	2 cut(s)	450, 559
BspFNI	CGCG	4 cut(s)	109, 120, 168, 692
BspLI	GGNNCC	4 cut(s)	202, 541, 1305, 1313
BspMI	ACCTGC	1 cut(s)	327
BspOI	GCTAGC	2 cut(s)	881, 977
BspPI	GGATC	4 cut(s)	712, 719, 940, 1099
BspT107I	GGYRCC	2 cut(s)	200, 1303
BspTI	CTTAAG	1 cut(s)	1376
BsrBI	CCGCTC	2 cut(s)	253, 295
BsrDI	GCAATG	1 cut(s)	9
BsrFI	RCCGGY	2 cut(s)	584, 674
BsrGI	TGTACA	1 cut(s)	1290
BsrI	ACTGG	3 cut(s)	73, 996, 1169
BssAI	RCCGGY	2 cut(s)	584, 674
BssECI	CCNNGG	4 cut(s)	897, 1074, 1307, 1316
BssMI	GATC	5 cut(s)	711, 717, 817, 945, 1091
BssNI	GRCGYC	1 cut(s)	201
BssSI	CACGAG	1 cut(s)	413
BssT1I	CCWWGG	2 cut(s)	897, 1316
Bst2BI	CACGAG	1 cut(s)	413
Bst2UI	CCWGG	1 cut(s)	1308
Bst4CI	ACNGT	1 cut(s)	844
Bst6I	CTCTTC	1 cut(s)	1100
BstACI	GRCGYC	1 cut(s)	201
BstAFI	CTTAAG	1 cut(s)	1376
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstAUI	TGTACA	1 cut(s)	1290
BstC8I	GCNNGC	7 cut(s)	154, 196, 219, 272, 586, 879, 975
BstDEI	CTNAG	3 cut(s)	458, 567, 660
BstDSI	CCRYGG	1 cut(s)	1316
BstF5I	GGATG	4 cut(s)	432, 940, 1071, 1116
BstFNI	CGCG	4 cut(s)	109, 120, 168, 692
BstH2I	RGCGCY	1 cut(s)	204
BstHHI	GCGC	2 cut(s)	111, 203
BstKTI	GATC	5 cut(s)	714, 720, 820, 948, 1094
BstMAI	GTCTC	4 cut(s)	206, 230, 784, 852
BstMBI	GATC	5 cut(s)	711, 717, 817, 945, 1091
BstNI	CCWGG	1 cut(s)	1308
BstSCI	CCNGG	4 cut(s)	977, 1007, 1218, 1306
BstUI	CGCG	4 cut(s)	109, 120, 168, 692
BstV1I	GCAGC	3 cut(s)	115, 1016, 1061
BstV2I	GAAGAC	1 cut(s)	611
BstX2I	RGATCY	1 cut(s)	717
BstYI	RGATCY	1 cut(s)	717
Bsu36I	CCTNAGG	1 cut(s)	458
BsuRI	GGCC	7 cut(s)	5, 33, 156, 189, 584, 1079, 1168
BtgI	CCRYGG	1 cut(s)	1316
BtsCI	GGATG	4 cut(s)	432, 940, 1071, 1116
BtsIMutI	CAGTG	2 cut(s)	989, 1405
BveI	ACCTGC	1 cut(s)	327
Cac8I	GCNNGC	7 cut(s)	154, 196, 219, 272, 586, 879, 975
CaiI	CAGNNNCTG	2 cut(s)	403, 842
CfoI	GCGC	2 cut(s)	111, 203
Cfr10I	RCCGGY	2 cut(s)	584, 674
Cfr13I	GGNCC	2 cut(s)	188, 540
CseI	GACGC	4 cut(s)	109, 157, 223, 409
Csp6I	GTAC	5 cut(s)	418, 688, 739, 840, 1291
CviAII	CATG	3 cut(s)	301, 821, 1317
CviQI	GTAC	5 cut(s)	418, 688, 739, 840, 1291
DdeI	CTNAG	3 cut(s)	458, 567, 660
DinI	GGCGCC	1 cut(s)	202
DpnI	GATC	5 cut(s)	713, 719, 819, 947, 1093
DpnII	GATC	5 cut(s)	711, 717, 817, 945, 1091
DrdI	GACNNNNNNGTC	1 cut(s)	344
DseDI	GACNNNNNNGTC	1 cut(s)	344
EaeI	YGGCCR	2 cut(s)	154, 1166
Eam1104I	CTCTTC	1 cut(s)	1100
EarI	CTCTTC	1 cut(s)	1100
EciI	GGCGGA	4 cut(s)	26, 243, 297, 930
Eco130I	CCWWGG	2 cut(s)	897, 1316
Eco32I	GATATC	4 cut(s)	331, 366, 391, 1189
Eco47I	GGWCC	1 cut(s)	540
Eco57I	CTGAAG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	458
Eco88I	CYCGRG	1 cut(s)	1027
EcoO109I	RGGNCCY	1 cut(s)	540
EcoRII	CCWGG	1 cut(s)	1306
EcoRV	GATATC	4 cut(s)	331, 366, 391, 1189
EcoT14I	CCWWGG	2 cut(s)	897, 1316
EgeI	GGCGCC	1 cut(s)	202
EheI	GGCGCC	1 cut(s)	202
ErhI	CCWWGG	2 cut(s)	897, 1316
Esp3I	CGTCTC	1 cut(s)	206
FaeI	CATG	3 cut(s)	304, 824, 1320
FalI	AAGNNNNNCTT	2 cut(s)	1259, 1291
FaqI	GGGAC	4 cut(s)	548, 553, 1139, 1166
FatI	CATG	3 cut(s)	300, 820, 1316
FauI	CCCGC	3 cut(s)	300, 581, 968
FbaI	TGATCA	1 cut(s)	817
FokI	GGATG	4 cut(s)	439, 927, 1078, 1123
FspBI	CTAG	4 cut(s)	471, 878, 974, 1405
GlaI	GCGC	2 cut(s)	110, 202
GsaI	CCCAGC	2 cut(s)	63, 194
HaeII	RGCGCY	1 cut(s)	204
HaeIII	GGCC	7 cut(s)	5, 33, 156, 189, 584, 1079, 1168
HapII	CCGG	6 cut(s)	340, 585, 675, 978, 1008, 1220
HgaI	GACGC	4 cut(s)	109, 157, 223, 409
HhaI	GCGC	2 cut(s)	111, 203
Hin1I	GRCGYC	1 cut(s)	201
Hin1II	CATG	3 cut(s)	304, 824, 1320
Hin6I	GCGC	2 cut(s)	109, 201
HinP1I	GCGC	2 cut(s)	109, 201
HinfI	GANTC	5 cut(s)	231, 345, 526, 847, 922
HpaII	CCGG	6 cut(s)	340, 585, 675, 978, 1008, 1220
HphI	GGTGA	8 cut(s)	58, 96, 340, 689, 782, 1009, 1010, 1043
Hpy166II	GTNNAC	1 cut(s)	739
Hpy188I	TCNGA	4 cut(s)	246, 525, 945, 1096
Hpy188III	TCNNGA	5 cut(s)	235, 651, 704, 715, 865
Hpy8I	GTNNAC	1 cut(s)	739
Hpy99I	CGWCG	3 cut(s)	32, 173, 376
HpyAV	CCTTC	7 cut(s)	34, 217, 963, 1028, 1056, 1115, 1192
HpyCH4III	ACNGT	1 cut(s)	844
HpyF3I	CTNAG	3 cut(s)	458, 567, 660
Hsp92I	GRCGYC	1 cut(s)	201
Hsp92II	CATG	3 cut(s)	304, 824, 1320
HspAI	GCGC	2 cut(s)	109, 201
KasI	GGCGCC	1 cut(s)	200
KroI	GCCGGC	1 cut(s)	584
KroNI	GCCGGC	1 cut(s)	586
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	5 cut(s)	711, 717, 817, 945, 1091
LmnI	GCTCC	3 cut(s)	284, 632, 1353
Lsp1109I	GCAGC	3 cut(s)	115, 1016, 1061
LweI	GCATC	3 cut(s)	610, 661, 991
MaeI	CTAG	4 cut(s)	471, 878, 974, 1405
MaeIII	GTNAC	3 cut(s)	346, 844, 1015
MalI	GATC	5 cut(s)	713, 719, 819, 947, 1093
MbiI	CCGCTC	2 cut(s)	253, 295
MboI	GATC	5 cut(s)	711, 717, 817, 945, 1091
MboII	GAAGA	6 cut(s)	370, 523, 613, 616, 1117, 1279
MflI	RGATCY	1 cut(s)	717
MhlI	GDGCHC	1 cut(s)	1185
MluCI	AATT	2 cut(s)	451, 646
Mly113I	GGCGCC	1 cut(s)	201
MlyI	GAGTC	4 cut(s)	240, 354, 535, 841
MmeI	TCCRAC	2 cut(s)	306, 811
MroNI	GCCGGC	1 cut(s)	584
MseI	TTAA	2 cut(s)	495, 1377
MslI	CAYNNNNRTG	2 cut(s)	353, 425
MspCI	CTTAAG	1 cut(s)	1376
MspI	CCGG	6 cut(s)	340, 585, 675, 978, 1008, 1220
MspR9I	CCNGG	4 cut(s)	979, 1009, 1220, 1308
MvaI	CCWGG	1 cut(s)	1308
MvnI	CGCG	4 cut(s)	109, 120, 168, 692
NaeI	GCCGGC	1 cut(s)	586
NarI	GGCGCC	1 cut(s)	201
NciI	CCSGG	3 cut(s)	979, 1009, 1220
NcoI	CCATGG	1 cut(s)	1316
NdeII	GATC	5 cut(s)	711, 717, 817, 945, 1091
NgoMIV	GCCGGC	1 cut(s)	584
NheI	GCTAGC	2 cut(s)	877, 973
NlaIII	CATG	3 cut(s)	304, 824, 1320
NlaIV	GGNNCC	4 cut(s)	202, 541, 1305, 1313
NmeAIII	GCCGAG	1 cut(s)	1099
NmuCI	GTSAC	3 cut(s)	346, 844, 1015
PcsI	WCGNNNNNNNCGW	1 cut(s)	1220
PdiI	GCCGGC	1 cut(s)	586
PfeI	GAWTC	1 cut(s)	922
PleI	GAGTC	4 cut(s)	239, 353, 534, 841
PluTI	GGCGCC	1 cut(s)	204
PpsI	GAGTC	4 cut(s)	239, 353, 534, 841
PpuMI	RGGWCCY	1 cut(s)	540
PshBI	ATTAAT	1 cut(s)	495
Psp5II	RGGWCCY	1 cut(s)	540
Psp6I	CCWGG	1 cut(s)	1306
PspFI	CCCAGC	2 cut(s)	59, 190
PspGI	CCWGG	1 cut(s)	1306
PspN4I	GGNNCC	4 cut(s)	202, 541, 1305, 1313
PspPI	GGNCC	2 cut(s)	188, 540
PspPPI	RGGWCCY	1 cut(s)	540
PstNI	CAGNNNCTG	2 cut(s)	403, 842
PsuI	RGATCY	1 cut(s)	717
RsaI	GTAC	5 cut(s)	419, 689, 740, 841, 1292
RsaNI	GTAC	5 cut(s)	418, 688, 739, 840, 1291
RseI	CAYNNNNRTG	2 cut(s)	353, 425
SaqAI	TTAA	2 cut(s)	495, 1377
Sau3AI	GATC	5 cut(s)	711, 717, 817, 945, 1091
Sau96I	GGNCC	2 cut(s)	188, 540
SchI	GAGTC	4 cut(s)	240, 354, 535, 841
ScrFI	CCNGG	4 cut(s)	979, 1009, 1220, 1308
SduI	GDGCHC	1 cut(s)	1185
SfaNI	GCATC	3 cut(s)	610, 661, 991
SfoI	GGCGCC	1 cut(s)	202
SinI	GGWCC	1 cut(s)	540
SmiMI	CAYNNNNRTG	2 cut(s)	353, 425
SmlI	CTYRAG	3 cut(s)	17, 1129, 1376
SmoI	CTYRAG	3 cut(s)	17, 1129, 1376
Sse9I	AATT	2 cut(s)	451, 646
SspDI	GGCGCC	1 cut(s)	200
SspMI	CTAG	4 cut(s)	471, 878, 974, 1405
StyD4I	CCNGG	4 cut(s)	977, 1007, 1218, 1306
StyI	CCWWGG	2 cut(s)	897, 1316
TaaI	ACNGT	1 cut(s)	844
TaqI	TCGA	5 cut(s)	51, 234, 374, 1185, 1214
TasI	AATT	2 cut(s)	451, 646
TatI	WGTACW	3 cut(s)	417, 738, 1290
TauI	GCSGC	9 cut(s)	159, 186, 189, 201, 206, 209, 282, 412, 436
TfiI	GAWTC	1 cut(s)	922
Tru1I	TTAA	2 cut(s)	495, 1377
Tru9I	TTAA	2 cut(s)	495, 1377
TscAI	CASTG	2 cut(s)	996, 1405
TseFI	GTSAC	3 cut(s)	346, 844, 1015
TseI	GCWGC	3 cut(s)	128, 1004, 1049
Tsp45I	GTSAC	3 cut(s)	346, 844, 1015
TspDTI	ATGAA	1 cut(s)	371
TspRI	CASTG	2 cut(s)	996, 1405
Vha464I	CTTAAG	1 cut(s)	1376
VpaK11BI	GGWCC	1 cut(s)	540
VspI	ATTAAT	1 cut(s)	495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XspI	CTAG	4 cut(s)	471, 878, 974, 1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.