Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006782

Physical Location & Seq

Genomic Coordinates Reverse (-)

38023710 .. 38025727

Gene Structure 2018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG171400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGTCTTTCGTCTTCAACATTGGCCAAGGGTTGCCAGGACGAACGTTAGCGAATGGCCAGCCAATCTGGCTATGCAATGCTCATTATGCAGATAGTAAAGTGTTTAGTCGCTCTCTACTAGCAAAGAGCGCGTCCATTCAGACTGTGGTATGCTTTCCTTTTATGGGAGGTGTGATAGAGCTGGGTGTGACTGAGCTGGTTCTGGAGGACCCCGGTCTCATTCAACACGTTAAAACATCATTTTTGGAGGTTCCATACCCCCTATGTTTGAACACAACCAATCCTAGTGCAGGAAGCTACAGAAATGACAATGATCTTACCAGCTCTGCGCTTGATCAGGATGTTATCGACACCAAATTCATTCCAATTGTAAGATGTGAAGAAATAGATGTGACTTACAGTTCAAATGGGTTCGGGCCAAATCAACCAGCTGAAGATTCATTCATGGTTGAAGGGATGAATGGGGCAGCTTCCCAAGTACAGAGCTGGCAGTATATGGATGATGAGTTAAGTAACTACGTACATCATTCCATGGATTCGAGTGATTGCATATCTCAAACATTGGTATATCCTGAAAAGATTGTCTCCGGTCCTAACGGTGAAAAGGTTGTCTCTGATCATTTTCTGCAAGATCATAAAGAGTGCAATTCCACAAAACAAGTCTCTTTGGCACCTGAAAGCAATGACTTGCATTACCAGAGTGTTCTTTCTTCCCTTCTAAAGAGCTCACACCAATTGATTTTGGGGCCACACTTTCAAAATGGTCGTCAGGAATCCAGCTTTGTGAGTTGGAAGAAAGGAGGATCTGTAAAATGCCGAAAACAACGAGTTGGAAGCCCGCAATACTTGTTGAAGAAGATTTTGTTTGAAGTTCCGAAGATGCATGTAATTTGTGTTCTTGAGTCCCCAGAAGATAATGGTGATCGAAATGGAGTTTGGAGACCAGAAGCTGGTGAAAGTCTTATGAACCATGTATTATCTGAGAGGAAGCGAAGGGAAAAACTAAATGAAAGGTTTTCCATTTTGAAATCTCTGGTGCCTTCAATTCAAAAGGATGACAAAGTAGCCATACTTGATGAAGCAATAGAGTATTTGAAAGATCTTGAGAAAAGAGTTGAAGAGTTGGAAACGTCCCAGGAGTCAACAGATTTAGAGGCAACAATAAAGAGGAAACCCCAAGATAATAGTGAGCAAACATCTGACAGCTGTTGCAACAACAAAAGGAGTAATGGGAAGAAACCATTAGTTTACAAGAGGAAGGCCTGCGACATTGATGAAACAGAACCAGAAATCAACTATGTTGCGTCTAAGAACAGTTCGAGTTACAAAGGCAAAGTGAAAAGAAAGAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0001101 GO:0001708 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0008544 GO:0009653 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009913 GO:0009957 GO:0009962 GO:0009963 GO:0009987 GO:0010026 GO:0010033 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0031540 GO:0031542 GO:0032502 GO:0032870 GO:0032989 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048468 GO:0048518 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060429 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

451

Amino Acids

50.55

Weight (kDa)

5.95

Isoelectric Point (pI)

55.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	1 - 81	3e-25	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	322 - 369	1.1e-13	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	327 - 372	3.5e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63650 AT1G63650 AT1G63650 AT5G41315 AT5G41315 AT5G41315
fragaria_vesca	FvH4_5g02520
malus_domestica	MD06G1084400.v1.1 MD14G1105500.v1.1
prunus_persica	Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1
pyrus_communis	pycom06g08070 pycom14g10100
rosa_chinensis	RchiOBHm_Chr7g0197531
rosa_laevigata	RLG00000003927
rosa_multiflora	Rmu_sc0007007.1_g000003
rosa_roxburghii	Rroxscaffold_3G00258370
rosa_rugosa	Rorug07G0040800
rosa_samantha	Rh1AG185600 Rh1CG171400 Rh7AG165700 Rh7BG167700 Rh7CG174100 Rh7DG167100
rosa_wichuraiana	Rw7G014420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	670, 1036
AccB7I	CCANNNNNTGG	1 cut(s)	950
AccII	CGCG	1 cut(s)	131
AciI	CCGC	1 cut(s)	839
AclI	AACGTT	1 cut(s)	44
AclWI	GGATC	1 cut(s)	811
AcoI	YGGCCR	2 cut(s)	22, 55
AcsI	RAATTY	2 cut(s)	356, 1349
AcuI	CTGAAG	1 cut(s)	453
AfaI	GTAC	2 cut(s)	480, 522
AfiI	CCNNNNNNNGG	3 cut(s)	164, 290, 950
AflIII	ACRYGT	1 cut(s)	226
AjnI	CCWGG	2 cut(s)	34, 1134
AjuI	GAANNNNNNNTTGG	2 cut(s)	919, 951
Alw21I	GWGCWC	1 cut(s)	728
Alw26I	GTCTC	5 cut(s)	221, 589, 616, 667, 934
AlwI	GGATC	1 cut(s)	811
AlwNI	CAGNNNCTG	1 cut(s)	950
AoxI	GGCC	5 cut(s)	22, 55, 416, 746, 1260
ApeKI	GCWGC	1 cut(s)	467
ApoI	RAATTY	2 cut(s)	356, 1349
ArsI	GACNNNNNNTTYG	4 cut(s)	116, 148, 751, 783
AspLEI	GCGC	2 cut(s)	131, 331
AspS9I	GGNCC	4 cut(s)	208, 416, 590, 746
AsuC2I	CCSGG	1 cut(s)	213
AsuHPI	GGTGA	3 cut(s)	611, 932, 965
AvaII	GGWCC	2 cut(s)	208, 590
BalI	TGGCCA	2 cut(s)	24, 57
BanI	GGYRCC	2 cut(s)	670, 1036
BanII	GRGCYC	1 cut(s)	728
BbsI	GAAGAC	1 cut(s)	4
Bbv12I	GWGCWC	1 cut(s)	728
BbvI	GCAGC	1 cut(s)	479
BciT130I	CCWGG	2 cut(s)	36, 1136
BclI	TGATCA	2 cut(s)	334, 616
BcnI	CCSGG	1 cut(s)	213
BcoDI	GTCTC	5 cut(s)	221, 589, 616, 667, 934
BfaI	CTAG	2 cut(s)	119, 285
BfmI	CTRYAG	1 cut(s)	298
BglI	GCCNNNNNGGC	1 cut(s)	67
BglII	AGATCT	1 cut(s)	1099
BisI	GCNGC	1 cut(s)	468
BlsI	GCNGC	1 cut(s)	469
Bme1390I	CCNGG	3 cut(s)	36, 213, 1136
Bme18I	GGWCC	2 cut(s)	208, 590
BmgT120I	GGNCC	4 cut(s)	208, 416, 590, 746
BmiI	GGNNCC	5 cut(s)	210, 252, 672, 747, 1038
BmrFI	CCNGG	3 cut(s)	36, 213, 1136
BmsI	GCATC	1 cut(s)	870
BoxI	GACNNNNGTC	1 cut(s)	213
BpiI	GAAGAC	1 cut(s)	4
BpmI	CTGGAG	1 cut(s)	224
BpuEI	CTTGAG	2 cut(s)	920, 1124
BpuMI	CCSGG	1 cut(s)	213
BsaAI	YACGTR	1 cut(s)	520
BsaI	GGTCTC	2 cut(s)	221, 934
BsaJI	CCNNGG	4 cut(s)	25, 211, 531, 1134
BsaWI	WCCGGW	1 cut(s)	587
BsaXI	ACNNNNNCTCC	2 cut(s)	792, 822
Bsc4I	CCNNNNNNNGG	3 cut(s)	164, 290, 950
Bse3DI	GCAATG	2 cut(s)	82, 688
BseBI	CCWGG	2 cut(s)	36, 1136
BseDI	CCNNGG	4 cut(s)	25, 211, 531, 1134
BseGI	GGATG	4 cut(s)	346, 462, 505, 1060
BseLI	CCNNNNNNNGG	3 cut(s)	164, 290, 950
BseMI	GCAATG	2 cut(s)	82, 688
BseMII	CTCAG	2 cut(s)	183, 972
BseXI	GCAGC	1 cut(s)	479
BseYI	CCCAGC	1 cut(s)	181
BsgI	GTGCAG	1 cut(s)	309
Bsh1236I	CGCG	1 cut(s)	131
BshFI	GGCC	5 cut(s)	24, 57, 418, 748, 1262
BshNI	GGYRCC	2 cut(s)	670, 1036
BsiHKAI	GWGCWC	1 cut(s)	728
BsiSI	CCGG	2 cut(s)	213, 588
BslFI	GGGAC	2 cut(s)	889, 1117
BslI	CCNNNNNNNGG	3 cut(s)	164, 290, 950
BsmAI	GTCTC	5 cut(s)	221, 589, 616, 667, 934
BsmFI	GGGAC	2 cut(s)	889, 1117
BsnI	GGCC	5 cut(s)	24, 57, 418, 748, 1262
Bso31I	GGTCTC	2 cut(s)	221, 934
Bsp1286I	GDGCHC	1 cut(s)	728
Bsp143I	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
Bsp19I	CCATGG	1 cut(s)	531
BspACI	CCGC	1 cut(s)	839
BspANI	GGCC	5 cut(s)	24, 57, 418, 748, 1262
BspCNI	CTCAG	2 cut(s)	184, 973
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	5 cut(s)	210, 252, 672, 747, 1038
BspPI	GGATC	1 cut(s)	811
BspT107I	GGYRCC	2 cut(s)	670, 1036
BspTNI	GGTCTC	2 cut(s)	221, 934
BsrDI	GCAATG	2 cut(s)	82, 688
BssECI	CCNNGG	4 cut(s)	25, 211, 531, 1134
BssMI	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
BssT1I	CCWWGG	2 cut(s)	25, 531
Bst2UI	CCWGG	2 cut(s)	36, 1136
Bst4CI	ACNGT	4 cut(s)	145, 401, 599, 1316
Bst6I	CTCTTC	1 cut(s)	1113
BstBAI	YACGTR	1 cut(s)	520
BstC8I	GCNNGC	4 cut(s)	59, 488, 839, 1264
BstDEI	CTNAG	3 cut(s)	192, 981, 1308
BstDSI	CCRYGG	1 cut(s)	531
BstENI	CCTNNNNNAGG	1 cut(s)	288
BstF5I	GGATG	4 cut(s)	346, 462, 505, 1060
BstFNI	CGCG	1 cut(s)	131
BstHHI	GCGC	2 cut(s)	131, 331
BstKTI	GATC	7 cut(s)	316, 337, 619, 634, 806, 925, 1102
BstMAI	GTCTC	5 cut(s)	221, 589, 616, 667, 934
BstMBI	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
BstMWI	GCNNNNNNNGC	3 cut(s)	67, 86, 128
BstNI	CCWGG	2 cut(s)	36, 1136
BstNSI	RCATGY	1 cut(s)	887
BstPAI	GACNNNNGTC	1 cut(s)	213
BstSCI	CCNGG	3 cut(s)	34, 211, 1134
BstSFI	CTRYAG	1 cut(s)	298
BstSNI	TACGTA	1 cut(s)	520
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	1 cut(s)	479
BstV2I	GAAGAC	1 cut(s)	4
BstX2I	RGATCY	2 cut(s)	803, 1099
BstYI	RGATCY	2 cut(s)	803, 1099
BsuRI	GGCC	5 cut(s)	24, 57, 418, 748, 1262
BtgI	CCRYGG	1 cut(s)	531
BtsCI	GGATG	4 cut(s)	346, 462, 505, 1060
Cac8I	GCNNGC	4 cut(s)	59, 488, 839, 1264
CaiI	CAGNNNCTG	1 cut(s)	950
CfoI	GCGC	2 cut(s)	131, 331
Cfr13I	GGNCC	4 cut(s)	208, 416, 590, 746
CseI	GACGC	2 cut(s)	120, 1293
Csp6I	GTAC	2 cut(s)	479, 521
CviAII	CATG	4 cut(s)	445, 532, 884, 971
CviQI	GTAC	2 cut(s)	479, 521
DdeI	CTNAG	3 cut(s)	192, 981, 1308
DpnI	GATC	7 cut(s)	315, 336, 618, 633, 805, 924, 1101
DpnII	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
EaeI	YGGCCR	2 cut(s)	22, 55
Eam1104I	CTCTTC	1 cut(s)	1113
EarI	CTCTTC	1 cut(s)	1113
Ecl136II	GAGCTC	1 cut(s)	726
Eco105I	TACGTA	1 cut(s)	520
Eco130I	CCWWGG	2 cut(s)	25, 531
Eco147I	AGGCCT	1 cut(s)	1262
Eco24I	GRGCYC	1 cut(s)	728
Eco31I	GGTCTC	2 cut(s)	221, 934
Eco47I	GGWCC	2 cut(s)	208, 590
Eco53kI	GAGCTC	1 cut(s)	726
Eco57I	CTGAAG	1 cut(s)	453
EcoICRI	GAGCTC	1 cut(s)	726
EcoNI	CCTNNNNNAGG	1 cut(s)	288
EcoO109I	RGGNCCY	1 cut(s)	208
EcoRII	CCWGG	2 cut(s)	34, 1134
EcoT14I	CCWWGG	2 cut(s)	25, 531
EcoT22I	ATGCAT	1 cut(s)	885
EcoT38I	GRGCYC	1 cut(s)	728
ErhI	CCWWGG	2 cut(s)	25, 531
FaeI	CATG	4 cut(s)	448, 535, 887, 974
FaqI	GGGAC	2 cut(s)	889, 1117
FatI	CATG	4 cut(s)	444, 531, 883, 970
FauI	CCCGC	1 cut(s)	846
FbaI	TGATCA	2 cut(s)	334, 616
Fnu4HI	GCNGC	1 cut(s)	468
FokI	GGATG	4 cut(s)	353, 469, 512, 1067
FriOI	GRGCYC	1 cut(s)	728
Fsp4HI	GCNGC	1 cut(s)	468
FspBI	CTAG	2 cut(s)	119, 285
GlaI	GCGC	2 cut(s)	130, 330
GluI	GCNGC	1 cut(s)	468
GsaI	CCCAGC	1 cut(s)	185
GsuI	CTGGAG	1 cut(s)	224
HaeIII	GGCC	5 cut(s)	24, 57, 418, 748, 1262
HapII	CCGG	2 cut(s)	213, 588
HgaI	GACGC	2 cut(s)	120, 1293
HhaI	GCGC	2 cut(s)	131, 331
Hin1II	CATG	4 cut(s)	448, 535, 887, 974
Hin6I	GCGC	2 cut(s)	129, 329
HinP1I	GCGC	2 cut(s)	129, 329
HincII	GTYRAC	1 cut(s)	1143
HindII	GTYRAC	1 cut(s)	1143
HinfI	GANTC	5 cut(s)	437, 536, 773, 902, 1139
HpaII	CCGG	2 cut(s)	213, 588
HphI	GGTGA	3 cut(s)	611, 932, 965
Hpy166II	GTNNAC	2 cut(s)	1143, 1249
Hpy188I	TCNGA	5 cut(s)	141, 616, 876, 982, 1201
Hpy188III	TCNNGA	6 cut(s)	203, 338, 572, 770, 899, 1103
Hpy8I	GTNNAC	2 cut(s)	1143, 1249
HpyAV	CCTTC	5 cut(s)	446, 725, 987, 1050, 1252
HpyCH4III	ACNGT	4 cut(s)	145, 401, 599, 1316
HpyCH4IV	ACGT	4 cut(s)	44, 228, 519, 1130
HpyCH4V	TGCA	9 cut(s)	75, 89, 290, 549, 628, 645, 691, 883, 1212
HpyF10VI	GCNNNNNNNGC	3 cut(s)	67, 86, 128
HpyF3I	CTNAG	3 cut(s)	192, 981, 1308
HpySE526I	ACGT	4 cut(s)	44, 228, 519, 1130
Hsp92II	CATG	4 cut(s)	448, 535, 887, 974
HspAI	GCGC	2 cut(s)	129, 329
Ksp22I	TGATCA	2 cut(s)	334, 616
Kzo9I	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
Lsp1109I	GCAGC	1 cut(s)	479
LweI	GCATC	1 cut(s)	870
MaeI	CTAG	2 cut(s)	119, 285
MaeII	ACGT	4 cut(s)	44, 228, 519, 1130
MaeIII	GTNAC	4 cut(s)	187, 391, 512, 1322
MalI	GATC	7 cut(s)	315, 336, 618, 633, 805, 924, 1101
MboI	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
MfeI	CAATTG	2 cut(s)	366, 734
MflI	RGATCY	2 cut(s)	803, 1099
MhlI	GDGCHC	1 cut(s)	728
MlsI	TGGCCA	2 cut(s)	24, 57
MluCI	AATT	7 cut(s)	356, 366, 646, 734, 888, 1044, 1349
MluNI	TGGCCA	2 cut(s)	24, 57
MlyI	GAGTC	2 cut(s)	911, 1148
MmeI	TCCRAC	3 cut(s)	770, 811, 1104
MnlI	CCTC	8 cut(s)	161, 199, 241, 794, 978, 1147, 1161, 1248
Mox20I	TGGCCA	2 cut(s)	24, 57
Mph1103I	ATGCAT	1 cut(s)	885
MscI	TGGCCA	2 cut(s)	24, 57
MseI	TTAA	2 cut(s)	231, 509
Msp20I	TGGCCA	2 cut(s)	24, 57
MspA1I	CMGCKG	2 cut(s)	431, 1206
MspI	CCGG	2 cut(s)	213, 588
MspR9I	CCNGG	3 cut(s)	36, 213, 1136
MunI	CAATTG	2 cut(s)	366, 734
MvaI	CCWGG	2 cut(s)	36, 1136
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	3 cut(s)	67, 86, 128
NciI	CCSGG	1 cut(s)	213
NcoI	CCATGG	1 cut(s)	531
NdeII	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
NlaIII	CATG	4 cut(s)	448, 535, 887, 974
NlaIV	GGNNCC	5 cut(s)	210, 252, 672, 747, 1038
NmuCI	GTSAC	2 cut(s)	187, 391
NsiI	ATGCAT	1 cut(s)	885
NspI	RCATGY	1 cut(s)	887
PceI	AGGCCT	1 cut(s)	1262
PfeI	GAWTC	3 cut(s)	437, 536, 773
PflMI	CCANNNNNTGG	1 cut(s)	950
PkrI	GCNGC	1 cut(s)	469
PleI	GAGTC	2 cut(s)	910, 1147
PpsI	GAGTC	2 cut(s)	910, 1147
Ppu21I	YACGTR	1 cut(s)	520
PpuMI	RGGWCCY	1 cut(s)	208
PshAI	GACNNNNGTC	1 cut(s)	213
Psp124BI	GAGCTC	1 cut(s)	728
Psp1406I	AACGTT	1 cut(s)	44
Psp5II	RGGWCCY	1 cut(s)	208
Psp6I	CCWGG	2 cut(s)	34, 1134
PspFI	CCCAGC	1 cut(s)	181
PspGI	CCWGG	2 cut(s)	34, 1134
PspN4I	GGNNCC	5 cut(s)	210, 252, 672, 747, 1038
PspPI	GGNCC	4 cut(s)	208, 416, 590, 746
PspPPI	RGGWCCY	1 cut(s)	208
PsrI	GAACNNNNNNTAC	2 cut(s)	879, 911
PstNI	CAGNNNCTG	1 cut(s)	950
PsuI	RGATCY	2 cut(s)	803, 1099
PvuII	CAGCTG	2 cut(s)	431, 1206
RsaI	GTAC	2 cut(s)	480, 522
RsaNI	GTAC	2 cut(s)	479, 521
SacI	GAGCTC	1 cut(s)	728
SaqAI	TTAA	2 cut(s)	231, 509
SatI	GCNGC	1 cut(s)	468
Sau3AI	GATC	7 cut(s)	313, 334, 616, 631, 803, 922, 1099
Sau96I	GGNCC	4 cut(s)	208, 416, 590, 746
SchI	GAGTC	2 cut(s)	911, 1148
ScrFI	CCNGG	3 cut(s)	36, 213, 1136
SduI	GDGCHC	1 cut(s)	728
SfaNI	GCATC	1 cut(s)	870
SfcI	CTRYAG	1 cut(s)	298
SinI	GGWCC	2 cut(s)	208, 590
SmlI	CTYRAG	2 cut(s)	899, 1103
SmoI	CTYRAG	2 cut(s)	899, 1103
SnaBI	TACGTA	1 cut(s)	520
Sse9I	AATT	7 cut(s)	356, 366, 646, 734, 888, 1044, 1349
SseBI	AGGCCT	1 cut(s)	1262
SsiI	CCGC	1 cut(s)	839
SspMI	CTAG	2 cut(s)	119, 285
SstI	GAGCTC	1 cut(s)	728
StuI	AGGCCT	1 cut(s)	1262
StyD4I	CCNGG	3 cut(s)	34, 211, 1134
StyI	CCWWGG	2 cut(s)	25, 531
TaaI	ACNGT	4 cut(s)	145, 401, 599, 1316
TaiI	ACGT	4 cut(s)	47, 231, 522, 1133
TaqI	TCGA	4 cut(s)	348, 539, 925, 1319
TasI	AATT	7 cut(s)	356, 366, 646, 734, 888, 1044, 1349
TatI	WGTACW	1 cut(s)	478
TfiI	GAWTC	3 cut(s)	437, 536, 773
Tru1I	TTAA	2 cut(s)	231, 509
Tru9I	TTAA	2 cut(s)	231, 509
TseFI	GTSAC	2 cut(s)	187, 391
TseI	GCWGC	1 cut(s)	467
Tsp45I	GTSAC	2 cut(s)	187, 391
TspDTI	ATGAA	8 cut(s)	349, 429, 433, 473, 980, 1023, 1092, 1290
Van91I	CCANNNNNTGG	1 cut(s)	950
VpaK11BI	GGWCC	2 cut(s)	208, 590
XagI	CCTNNNNNAGG	1 cut(s)	288
XapI	RAATTY	2 cut(s)	356, 1349
XceI	RCATGY	1 cut(s)	887
XcmI	CCANNNNNNNNNTGG	1 cut(s)	142
XspI	CTAG	2 cut(s)	119, 285
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.