Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0006782

Physical Location & Seq

Genomic Coordinates Forward (+)

16408927 .. 16413658

Gene Structure 4732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1105500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCGGTGCCAGAGAACCTGAGAAAACAGCTTGCGCTTGCTGTGAGAAGCATCCAGTGGAGCTATGGAATCTTCTGGTCCATTTCAGCCAGGCAACCAGGGGTGTTAGAGTGGGGTGATGGGTACTACAATGGAGATATAAAGACCAGAAAAACAGTTCAAGCCATAGAACTCAATGCTGACCAAATGGGTTTGCAAAGGAGTGAGCAACTGAGAGAACTTTATGAGTCCCTCTCAGCGGGTGAAGCAAGTCCGCAGGCTAGAAGGCCTTCAGCATCATTATCACCCGAAGATCTCGCTGATACTGAGTGGTATTACCTAGTTTGTATGTCGTTCGTCTTCAACATTGGCCAAGGGTTGCCTGGAAGAACATTAGCAAATGGTAAACCTACCTGGCTATGCAATGCTCACTATGCGGATAGTAAAGTGTTTTCTCGTTCACTACTAGCAAAGACTGTTGTATGCTTTCCTTTTTTGGGAGGAGTGATCGAGATCGGTGTGACTGAGCTGGTTCTGGAGGACCCTAGTCTCATTCAGCATGTTAAAACATCTTTCTTGGAGGCTCCGTATCCAATAATAGCTTCCAAGAGAACCAATCCTAGTGCAGGAAGCACAAGAAACGACAATGATCTTGCCTGCGCCGTGCTTGATGATGATGTGGTTGACACCAAATTCATTCCTGTTGTAGGATGCCAAGAAATGGATGTGACTTCACCCGATGACAGTTCAAATTGTTTGGGTCGTCCGAATCAACCAGTTGATGATTCATTCATCGCTGAAGGGATGAACAGGGGAGCCTCTCAAGTGCAAAGCTGGCAGTTTATGGACGACGAGATAAGTAATTTTGTGCATCATTCCATGGATTCCAGTGATTGTATATCTCAGACTTTGGTGTACCCAGAAAAGGTCCTCTTCGGTCCTAAGACTGAGAAGGTAAATGATCACTGTCCGCATGAACTTAAAGAGTGCAATAACACAAAAATGACCTCTTCGGAAACTCAAGGCAATGACTTGCAGTATCAAAGTGTTCTTTCTGCCCTTTTAAAGAGCTCACACCAATTGGTTTTAGGGCCACACTTCCGGAATTCTCATCAGGAATCCAGCTTTGCCAGTTGGAAGAGAGGGTGGTTTGTAAAATGTTGGACACAAAGAAGTGGAACACCACAAAAACTACTGAAGAAGATTTTGTTTGAAGTTCCTCAGATGCATGTTGATTGTGTGCTAGTGTCCCCAGCAGATAAAAGCAATGTAAATGGAGTTTGGAGACCAGAGGCCGATGAAATTGGTACGAACCATGCATTATCTGAGAGGAGGCGAAGGGAAAAACTGAATGAAAGATTTTGCATTTTGAAATCAATGGTTCCCTCAGTTAGCAAGGAGGACAAAGTATCCATATTAGATGATGCAATAGAGTATTTGAAAGATCTTGAGAAAAGGGTTGAAGAGTTGGAATCGTTACGGGAACCAACAGATTCAGAAGCAAAAATCAAGAGGAAACTCCAAGATACAGTTGAAAGAACATCTGACAACTGTTGCAACACCAAAATTAGCAACGGGAAGAAGCCCATAGTTTATAAGAGGAAGGCCAGTGACATGGATGAAACAGAACCAGAAATCAATCACATTGTATCGAAGAACAGTTCAAGTGACAATATTACAGTGAATATGACCAACAAGGATGTTCTAATAGAGATGAAGTTTCCTTGGAGGGAAGGAGTGTTGCTAGAGATCATGGATACCACAAGCCGGCTTCATTTAGATACTCACTCAGTTCAATCATCCACCGCAGATGGGATTCTTTCCCTGACCATTAAATCCAGGTTCAGGGGGACGAGTATTGCATCAACGGGCACAATCAAGCAAGCACTTCACAGAATTGCCAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0001101 GO:0001708 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0008544 GO:0009653 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009913 GO:0009957 GO:0009962 GO:0009963 GO:0009987 GO:0010026 GO:0010033 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0031540 GO:0031542 GO:0032502 GO:0032870 GO:0032989 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048468 GO:0048518 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060429 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

630

Amino Acids

70.54

Weight (kDa)

5.91

Isoelectric Point (pI)

50.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	7 - 185	3.6e-47	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	430 - 477	8.6e-13	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	436 - 479	1.4e-06	Transcription factor SAC51 bHLH domain
bHLH-TF_ACT-like_plant	PF22754	551 - 627	2e-20	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63650 AT1G63650 AT1G63650 AT5G41315 AT5G41315 AT5G41315
fragaria_vesca	FvH4_5g02520
malus_domestica	MD06G1084400.v1.1 MD14G1105500.v1.1
prunus_persica	Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1 Prupe.5G100700_v2.0.a1
pyrus_communis	pycom06g08070 pycom14g10100
rosa_chinensis	RchiOBHm_Chr7g0197531
rosa_laevigata	RLG00000003927
rosa_multiflora	Rmu_sc0007007.1_g000003
rosa_roxburghii	Rroxscaffold_3G00258370
rosa_rugosa	Rorug07G0040800
rosa_samantha	Rh1AG185600 Rh1CG171400 Rh7AG165700 Rh7BG167700 Rh7CG174100 Rh7DG167100
rosa_wichuraiana	Rw7G014420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1575
AccB1I	GGYRCC	1 cut(s)	7
AccB7I	CCANNNNNTGG	1 cut(s)	700
AccIII	TCCGGA	1 cut(s)	1080
AciI	CCGC	6 cut(s)	5, 239, 254, 416, 950, 1785
AcoI	YGGCCR	1 cut(s)	349
AcsI	RAATTY	2 cut(s)	671, 1084
AcuI	CTGAAG	3 cut(s)	255, 798, 1196
AfaI	GTAC	3 cut(s)	125, 896, 1288
AfiI	CCNNNNNNNGG	9 cut(s)	238, 476, 605, 686, 700, 904, 1746, 1791, 1824
AjnI	CCWGG	5 cut(s)	89, 97, 361, 392, 1817
AjuI	GAANNNNNNNTTGG	2 cut(s)	565, 597
AluBI	AGCT	7 cut(s)	31, 63, 508, 581, 813, 1050, 1104
AluI	AGCT	7 cut(s)	31, 63, 508, 581, 813, 1050, 1104
Alw21I	GWGCWC	1 cut(s)	1052
Alw26I	GTCTC	2 cut(s)	533, 1258
Aor13HI	TCCGGA	1 cut(s)	1080
AoxI	GGCC	5 cut(s)	266, 349, 1070, 1272, 1584
ApoI	RAATTY	2 cut(s)	671, 1084
Asp700I	GAANNNNTTC	1 cut(s)	268
AspLEI	GCGC	2 cut(s)	37, 641
AspS9I	GGNCC	5 cut(s)	78, 520, 907, 917, 1070
AsuHPI	GGTGA	4 cut(s)	128, 254, 276, 705
AvaII	GGWCC	4 cut(s)	78, 520, 907, 917
BaeGI	GKGCMC	1 cut(s)	1853
BalI	TGGCCA	1 cut(s)	351
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	1 cut(s)	1052
BbsI	GAAGAC	1 cut(s)	331
Bbv12I	GWGCWC	1 cut(s)	1052
BccI	CCATC	2 cut(s)	113, 1784
BceAI	ACGGC	1 cut(s)	626
BciT130I	CCWGG	5 cut(s)	91, 99, 363, 394, 1819
BciVI	GTATCC	3 cut(s)	579, 1399, 1729
BclI	TGATCA	1 cut(s)	940
BcoDI	GTCTC	2 cut(s)	533, 1258
BfaI	CTAG	7 cut(s)	261, 320, 446, 525, 600, 1223, 1724
BfuI	GTATCC	3 cut(s)	579, 1399, 1729
BglII	AGATCT	2 cut(s)	292, 1423
Bme1390I	CCNGG	5 cut(s)	91, 99, 363, 394, 1819
Bme18I	GGWCC	4 cut(s)	78, 520, 907, 917
BmgT120I	GGNCC	5 cut(s)	78, 520, 907, 917, 1070
BmiI	GGNNCC	6 cut(s)	9, 522, 564, 796, 1362, 1464
BmrFI	CCNGG	5 cut(s)	91, 99, 363, 394, 1819
BmsI	GCATC	7 cut(s)	60, 284, 680, 859, 1194, 1393, 1850
BoxI	GACNNNNGTC	1 cut(s)	525
BpiI	GAAGAC	1 cut(s)	331
BplI	GAGNNNNNCTC	2 cut(s)	218, 250
BpmI	CTGGAG	1 cut(s)	536
BpuEI	CTTGAG	3 cut(s)	786, 984, 1448
BsaBI	GATNNNNATC	1 cut(s)	491
BsaI	GGTCTC	1 cut(s)	1258
BsaJI	CCNNGG	4 cut(s)	98, 352, 858, 1703
BsaWI	WCCGGW	1 cut(s)	1080
BsaXI	ACNNNNNCTCC	2 cut(s)	551, 581
Bsc4I	CCNNNNNNNGG	9 cut(s)	238, 476, 605, 686, 700, 904, 1746, 1791, 1824
Bse118I	RCCGGY	1 cut(s)	1746
Bse1I	ACTGG	5 cut(s)	55, 755, 867, 1110, 1587
Bse3DI	GCAATG	3 cut(s)	409, 1012, 1252
Bse8I	GATNNNNATC	1 cut(s)	491
BseAI	TCCGGA	1 cut(s)	1080
BseBI	CCWGG	5 cut(s)	91, 99, 363, 394, 1819
BseDI	CCNNGG	4 cut(s)	98, 352, 858, 1703
BseGI	GGATG	7 cut(s)	51, 695, 709, 789, 1603, 1684, 1778
BseJI	GATNNNNATC	1 cut(s)	491
BseLI	CCNNNNNNNGG	9 cut(s)	238, 476, 605, 686, 700, 904, 1746, 1791, 1824
BseMI	GCAATG	3 cut(s)	409, 1012, 1252
BseNI	ACTGG	5 cut(s)	55, 755, 867, 1110, 1587
BseRI	GAGGAG	2 cut(s)	495, 1324
BseSI	GKGCMC	1 cut(s)	1853
BseYI	CCCAGC	1 cut(s)	1231
BsgI	GTGCAG	1 cut(s)	624
BshFI	GGCC	5 cut(s)	268, 351, 1072, 1274, 1586
BshNI	GGYRCC	1 cut(s)	7
BsiHKAI	GWGCWC	1 cut(s)	1052
BsiSI	CCGG	2 cut(s)	1081, 1747
BslFI	GGGAC	3 cut(s)	214, 1213, 1843
BslI	CCNNNNNNNGG	9 cut(s)	238, 476, 605, 686, 700, 904, 1746, 1791, 1824
BsmAI	GTCTC	2 cut(s)	533, 1258
BsmFI	GGGAC	3 cut(s)	214, 1213, 1843
BsnI	GGCC	5 cut(s)	268, 351, 1072, 1274, 1586
Bso31I	GGTCTC	1 cut(s)	1258
Bsp1286I	GDGCHC	2 cut(s)	1052, 1853
Bsp13I	TCCGGA	1 cut(s)	1080
Bsp143I	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
Bsp19I	CCATGG	1 cut(s)	858
BspACI	CCGC	6 cut(s)	5, 239, 254, 416, 950, 1785
BspANI	GGCC	5 cut(s)	268, 351, 1072, 1274, 1586
BspEI	TCCGGA	1 cut(s)	1080
BspLI	GGNNCC	6 cut(s)	9, 522, 564, 796, 1362, 1464
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	1 cut(s)	1258
BsrDI	GCAATG	3 cut(s)	409, 1012, 1252
BsrFI	RCCGGY	1 cut(s)	1746
BsrI	ACTGG	5 cut(s)	55, 755, 867, 1110, 1587
BssAI	RCCGGY	1 cut(s)	1746
BssECI	CCNNGG	4 cut(s)	98, 352, 858, 1703
BssMI	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
BssT1I	CCWWGG	3 cut(s)	352, 858, 1703
Bst2UI	CCWGG	5 cut(s)	91, 99, 363, 394, 1819
Bst4CI	ACNGT	8 cut(s)	157, 457, 725, 947, 1510, 1532, 1640, 1660
Bst6I	CTCTTC	4 cut(s)	917, 994, 1112, 1437
BstC8I	GCNNGC	7 cut(s)	33, 39, 258, 637, 815, 1748, 1863
BstDSI	CCRYGG	1 cut(s)	858
BstENI	CCTNNNNNAGG	2 cut(s)	603, 684
BstF5I	GGATG	7 cut(s)	51, 695, 709, 789, 1603, 1684, 1778
BstHHI	GCGC	2 cut(s)	37, 641
BstKTI	GATC	7 cut(s)	295, 489, 495, 631, 943, 1426, 1731
BstMAI	GTCTC	2 cut(s)	533, 1258
BstMBI	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
BstMWI	GCNNNNNNNGC	3 cut(s)	245, 413, 814
BstNI	CCWGG	5 cut(s)	91, 99, 363, 394, 1819
BstNSI	RCATGY	2 cut(s)	542, 1211
BstPAI	GACNNNNGTC	1 cut(s)	525
BstSCI	CCNGG	5 cut(s)	89, 97, 361, 392, 1817
BstSLI	GKGCMC	1 cut(s)	1853
BstV2I	GAAGAC	1 cut(s)	331
BstX2I	RGATCY	2 cut(s)	292, 1423
BstXI	CCANNNNNNTGG	1 cut(s)	1594
BstYI	RGATCY	2 cut(s)	292, 1423
BsuI	GTATCC	3 cut(s)	579, 1399, 1729
BsuRI	GGCC	5 cut(s)	268, 351, 1072, 1274, 1586
BtgI	CCRYGG	1 cut(s)	858
BtgZI	GCGATG	1 cut(s)	757
BtsCI	GGATG	7 cut(s)	51, 695, 709, 789, 1603, 1684, 1778
BtsIMutI	CAGTG	5 cut(s)	62, 874, 943, 1594, 1665
Cac8I	GCNNGC	7 cut(s)	33, 39, 258, 637, 815, 1748, 1863
CfoI	GCGC	2 cut(s)	37, 641
Cfr10I	RCCGGY	1 cut(s)	1746
Cfr13I	GGNCC	5 cut(s)	78, 520, 907, 917, 1070
Csp6I	GTAC	3 cut(s)	124, 895, 1287
CviAII	CATG	7 cut(s)	539, 859, 953, 1208, 1295, 1594, 1732
CviQI	GTAC	3 cut(s)	124, 895, 1287
DpnI	GATC	7 cut(s)	294, 488, 494, 630, 942, 1425, 1730
DpnII	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
DraI	TTTAAA	1 cut(s)	1044
EaeI	YGGCCR	1 cut(s)	349
Eam1104I	CTCTTC	4 cut(s)	917, 994, 1112, 1437
EarI	CTCTTC	4 cut(s)	917, 994, 1112, 1437
Ecl136II	GAGCTC	1 cut(s)	1050
Eco130I	CCWWGG	3 cut(s)	352, 858, 1703
Eco147I	AGGCCT	1 cut(s)	268
Eco24I	GRGCYC	1 cut(s)	1052
Eco31I	GGTCTC	1 cut(s)	1258
Eco47I	GGWCC	4 cut(s)	78, 520, 907, 917
Eco53kI	GAGCTC	1 cut(s)	1050
Eco57I	CTGAAG	3 cut(s)	255, 798, 1196
EcoICRI	GAGCTC	1 cut(s)	1050
EcoNI	CCTNNNNNAGG	2 cut(s)	603, 684
EcoO109I	RGGNCCY	2 cut(s)	520, 907
EcoRI	GAATTC	1 cut(s)	1084
EcoRII	CCWGG	5 cut(s)	89, 97, 361, 392, 1817
EcoT14I	CCWWGG	3 cut(s)	352, 858, 1703
EcoT22I	ATGCAT	2 cut(s)	1209, 1300
EcoT38I	GRGCYC	1 cut(s)	1052
ErhI	CCWWGG	3 cut(s)	352, 858, 1703
FaeI	CATG	7 cut(s)	542, 862, 956, 1211, 1298, 1597, 1735
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	3 cut(s)	214, 1213, 1843
FatI	CATG	7 cut(s)	538, 858, 952, 1207, 1294, 1593, 1731
FauI	CCCGC	1 cut(s)	232
FbaI	TGATCA	1 cut(s)	940
FokI	GGATG	7 cut(s)	38, 702, 716, 796, 1610, 1691, 1765
FriOI	GRGCYC	1 cut(s)	1052
FspBI	CTAG	7 cut(s)	261, 320, 446, 525, 600, 1223, 1724
GlaI	GCGC	2 cut(s)	36, 640
GsaI	CCCAGC	1 cut(s)	1235
GsuI	CTGGAG	1 cut(s)	536
HaeIII	GGCC	5 cut(s)	268, 351, 1072, 1274, 1586
HapII	CCGG	2 cut(s)	1081, 1747
HhaI	GCGC	2 cut(s)	37, 641
Hin1II	CATG	7 cut(s)	542, 862, 956, 1211, 1298, 1597, 1735
Hin6I	GCGC	2 cut(s)	35, 639
HinP1I	GCGC	2 cut(s)	35, 639
HincII	GTYRAC	1 cut(s)	664
HindII	GTYRAC	1 cut(s)	664
HinfI	GANTC	9 cut(s)	69, 227, 748, 764, 863, 1097, 1451, 1472, 1795
HpaII	CCGG	2 cut(s)	1081, 1747
HphI	GGTGA	4 cut(s)	128, 254, 276, 705
Hpy166II	GTNNAC	4 cut(s)	386, 440, 664, 895
Hpy188I	TCNGA	7 cut(s)	747, 885, 994, 1203, 1306, 1477, 1525
Hpy188III	TCNNGA	6 cut(s)	490, 515, 1081, 1094, 1427, 1489
Hpy8I	GTNNAC	4 cut(s)	386, 440, 664, 895
Hpy99I	CGWCG	1 cut(s)	833
HpyAV	CCTTC	7 cut(s)	258, 279, 773, 925, 1311, 1576, 1706
HpyCH4III	ACNGT	8 cut(s)	157, 457, 725, 947, 1510, 1532, 1640, 1660
HpyF10VI	GCNNNNNNNGC	3 cut(s)	245, 413, 814
Hsp92II	CATG	7 cut(s)	542, 862, 956, 1211, 1298, 1597, 1735
HspAI	GCGC	2 cut(s)	35, 639
Kpn2I	TCCGGA	1 cut(s)	1080
KroI	GCCGGC	1 cut(s)	1746
KroNI	GCCGGC	1 cut(s)	1748
Ksp22I	TGATCA	1 cut(s)	940
Kzo9I	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
LmnI	GCTCC	3 cut(s)	60, 568, 794
LweI	GCATC	7 cut(s)	60, 284, 680, 859, 1194, 1393, 1850
MaeI	CTAG	7 cut(s)	261, 320, 446, 525, 600, 1223, 1724
MaeIII	GTNAC	5 cut(s)	499, 706, 1455, 1589, 1646
MalI	GATC	7 cut(s)	294, 488, 494, 630, 942, 1425, 1730
MboI	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
MfeI	CAATTG	1 cut(s)	1058
MflI	RGATCY	2 cut(s)	292, 1423
MhlI	GDGCHC	2 cut(s)	1052, 1853
MlsI	TGGCCA	1 cut(s)	351
MluCI	AATT	8 cut(s)	671, 730, 841, 1058, 1084, 1281, 1545, 1875
MluNI	TGGCCA	1 cut(s)	351
MlyI	GAGTC	1 cut(s)	236
MmeI	TCCRAC	3 cut(s)	1094, 1121, 1428
Mox20I	TGGCCA	1 cut(s)	351
Mph1103I	ATGCAT	2 cut(s)	1209, 1300
MroI	TCCGGA	1 cut(s)	1080
MroNI	GCCGGC	1 cut(s)	1746
MroXI	GAANNNNTTC	1 cut(s)	268
MscI	TGGCCA	1 cut(s)	351
MseI	TTAA	4 cut(s)	543, 960, 1043, 1812
MslI	CAYNNNNRTG	1 cut(s)	980
Msp20I	TGGCCA	1 cut(s)	351
MspA1I	CMGCKG	1 cut(s)	239
MspI	CCGG	2 cut(s)	1081, 1747
MspR9I	CCNGG	5 cut(s)	91, 99, 363, 394, 1819
MunI	CAATTG	1 cut(s)	1058
MvaI	CCWGG	5 cut(s)	91, 99, 363, 394, 1819
MwoI	GCNNNNNNNGC	3 cut(s)	245, 413, 814
NaeI	GCCGGC	1 cut(s)	1748
NcoI	CCATGG	1 cut(s)	858
NdeII	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
NgoMIV	GCCGGC	1 cut(s)	1746
NlaIII	CATG	7 cut(s)	542, 862, 956, 1211, 1298, 1597, 1735
NlaIV	GGNNCC	6 cut(s)	9, 522, 564, 796, 1362, 1464
NmuCI	GTSAC	4 cut(s)	499, 706, 1589, 1646
NsiI	ATGCAT	2 cut(s)	1209, 1300
NspI	RCATGY	2 cut(s)	542, 1211
PceI	AGGCCT	1 cut(s)	268
PdiI	GCCGGC	1 cut(s)	1748
PdmI	GAANNNNTTC	1 cut(s)	268
PfeI	GAWTC	8 cut(s)	69, 748, 764, 863, 1097, 1451, 1472, 1795
PflMI	CCANNNNNTGG	1 cut(s)	700
PleI	GAGTC	1 cut(s)	235
PpsI	GAGTC	1 cut(s)	235
PpuMI	RGGWCCY	2 cut(s)	520, 907
PshAI	GACNNNNGTC	1 cut(s)	525
PsiI	TTATAA	1 cut(s)	1575
Psp124BI	GAGCTC	1 cut(s)	1052
Psp5II	RGGWCCY	2 cut(s)	520, 907
Psp6I	CCWGG	5 cut(s)	89, 97, 361, 392, 1817
PspFI	CCCAGC	1 cut(s)	1231
PspGI	CCWGG	5 cut(s)	89, 97, 361, 392, 1817
PspN4I	GGNNCC	6 cut(s)	9, 522, 564, 796, 1362, 1464
PspPI	GGNCC	5 cut(s)	78, 520, 907, 917, 1070
PspPPI	RGGWCCY	2 cut(s)	520, 907
PsuI	RGATCY	2 cut(s)	292, 1423
RsaI	GTAC	3 cut(s)	125, 896, 1288
RsaNI	GTAC	3 cut(s)	124, 895, 1287
RseI	CAYNNNNRTG	1 cut(s)	980
SacI	GAGCTC	1 cut(s)	1052
SaqAI	TTAA	4 cut(s)	543, 960, 1043, 1812
Sau3AI	GATC	7 cut(s)	292, 486, 492, 628, 940, 1423, 1728
Sau96I	GGNCC	5 cut(s)	78, 520, 907, 917, 1070
SchI	GAGTC	1 cut(s)	236
ScrFI	CCNGG	5 cut(s)	91, 99, 363, 394, 1819
SduI	GDGCHC	2 cut(s)	1052, 1853
SfaNI	GCATC	7 cut(s)	60, 284, 680, 859, 1194, 1393, 1850
SinI	GGWCC	4 cut(s)	78, 520, 907, 917
SmiMI	CAYNNNNRTG	1 cut(s)	980
SmlI	CTYRAG	3 cut(s)	801, 999, 1427
SmoI	CTYRAG	3 cut(s)	801, 999, 1427
Sse9I	AATT	8 cut(s)	671, 730, 841, 1058, 1084, 1281, 1545, 1875
SseBI	AGGCCT	1 cut(s)	268
SsiI	CCGC	6 cut(s)	5, 239, 254, 416, 950, 1785
SspI	AATATT	1 cut(s)	1654
SspMI	CTAG	7 cut(s)	261, 320, 446, 525, 600, 1223, 1724
SstI	GAGCTC	1 cut(s)	1052
StuI	AGGCCT	1 cut(s)	268
StyD4I	CCNGG	5 cut(s)	89, 97, 361, 392, 1817
StyI	CCWWGG	3 cut(s)	352, 858, 1703
TaaI	ACNGT	8 cut(s)	157, 457, 725, 947, 1510, 1532, 1640, 1660
TaqI	TCGA	2 cut(s)	489, 1631
TaqII	GACCGA	1 cut(s)	905
TasI	AATT	8 cut(s)	671, 730, 841, 1058, 1084, 1281, 1545, 1875
TfiI	GAWTC	8 cut(s)	69, 748, 764, 863, 1097, 1451, 1472, 1795
Tru1I	TTAA	4 cut(s)	543, 960, 1043, 1812
Tru9I	TTAA	4 cut(s)	543, 960, 1043, 1812
TscAI	CASTG	5 cut(s)	62, 874, 950, 1594, 1665
TseFI	GTSAC	4 cut(s)	499, 706, 1589, 1646
Tsp45I	GTSAC	4 cut(s)	499, 706, 1589, 1646
TspGWI	ACGGA	1 cut(s)	555
TspRI	CASTG	5 cut(s)	62, 874, 950, 1594, 1665
Van91I	CCANNNNNTGG	1 cut(s)	700
VpaK11BI	GGWCC	4 cut(s)	78, 520, 907, 917
XagI	CCTNNNNNAGG	2 cut(s)	603, 684
XapI	RAATTY	2 cut(s)	671, 1084
XceI	RCATGY	2 cut(s)	542, 1211
XcmI	CCANNNNNNNNNTGG	2 cut(s)	62, 359
XmnI	GAANNNNTTC	1 cut(s)	268
XspI	CTAG	7 cut(s)	261, 320, 446, 525, 600, 1223, 1724
Zsp2I	ATGCAT	2 cut(s)	1209, 1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.