AT5G44250

Eukaryotic protein of unknown function (DUF829)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
17823714 .. 17825762
2049 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44250.1

Sequence Viewer

Length: 1212 bp
ATGTGGGGAATTGGAGGAAATTACTACTGGCGAAAGAAAAACAACAACGGAGGAGAAAGCGAAGCGATCGTTGTGGTATTCGCTTGGATGTCTAGCGAAGAACGCAATCTAAAGAACCATGTCGATCTCTATTCTTCTCTTCTTTGGGATTCTCTCGTTTGCCATTCTCAATTTCTCAACATGTTTCTTCCAGATAAAGCTGCAGATTTAGCTTCTAATGTTGTTTCTGAACTTGTCAAGGAGCTCAAAGCAAAGCCAGTTCCTTTAGTGTTTGCTTCTTTCTCTGGTGGTCCTAATGCTTGTATGTATAAAGTTCTTCAAATACTTGAAGGAACATGCGAAACGGGACTAAATCCGGATGATTGTAGATTGGTTAGAAACTGCATCTCAGGGTTTATTTATGACTCATGTCCTGTGGATTTCACTAGCGACTTGGGAGCTCGATTAGCGGTTCATCCAACTACGCTTAAAATGTCTAGTCCACCTAAACCGTTTGTATGGGCAGCGAATGGTATTGCTTCGAGTCTCGATTATGTTTTTCTCAACAGGTTTGAATCACAGCGAGCCGAGTACTGGCAGACTCTTTACTCTACTATAATCATGAGAGTACCTTATCTCATTCTATGCTCTGAAAACGATGACCTTGCTCCTTATCAAACTATACACAATTTCGCTACACGTCTCCAAGAACTAGGAGGAAATGTAAAACTTGTAAAATGGAATGATTCCCCTCATTGTGGTCATTATCGTTATAACCAGGTCGACTATAAAGCTGCTGTATCTGAGTTCTTGTCAAAAGCAGCGTCGGTTTATTCGCAGAAGACGAGAAGTCTTGACAGAGAAGCTATGAAAGGAACATGTCATGATGAGATAACAGAGCCAATTCAGAGCTTGGGGCAATCAACCTCTGGTCTTAACCGAAGCTTCAACGGAACTCCACTTGTCACAACCGATCATTTCTTCGTACCTAGCACCGTAGGTTACTACGTGGGCAGAGACGGCGGATATGTGCAAGATGAACACAAACAAGATTTGATTTGTTTGTCCAATACTCAAACCAATGAATCGGTTAAGCCCAATGGAGTTCTAGGCCAAATCTTATTTGATGTTTATATTCCGAAGAATGTTGAGGATTGGGATATAAAGCTATCAGAAACCGGGCGGTCTAGGCGGAGACCGGGGAAGAGATTTATACGTAGATCGAGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

403

Amino Acids

45.44

Weight (kDa)

7.09

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF829 PF05705 23 - 141 5e-08 Eukaryotic protein of unknown function (DUF829)
DUF829 PF05705 129 - 379 7.2e-44 Eukaryotic protein of unknown function (DUF829)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 753
AccI GTMKAC 1 cut(s) 762
AccIII TCCGGA 1 cut(s) 355
AciI CCGC 4 cut(s) 449, 1002, 1162, 1171
AfaI GTAC 3 cut(s) 572, 609, 966
AfiI CCNNNNNNNGG 2 cut(s) 573, 737
AflIII ACRYGT 3 cut(s) 180, 677, 857
AgsI TTSAA 4 cut(s) 320, 329, 554, 928
AhdI GACNNNNNGTC 1 cut(s) 828
AjiI CACGTC 1 cut(s) 680
AjnI CCWGG 1 cut(s) 756
AluBI AGCT 9 cut(s) 200, 212, 244, 440, 773, 845, 891, 924, 1147
AluI AGCT 9 cut(s) 200, 212, 244, 440, 773, 845, 891, 924, 1147
Alw21I GWGCWC 2 cut(s) 246, 442
Alw26I GTCTC 4 cut(s) 530, 686, 990, 1168
Aor13HI TCCGGA 1 cut(s) 355
AoxI GGCC 1 cut(s) 1090
ApeKI GCWGC 4 cut(s) 200, 503, 773, 800
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
AspS9I GGNCC 1 cut(s) 290
AsuC2I CCSGG 2 cut(s) 1159, 1179
AvaII GGWCC 1 cut(s) 290
BanII GRGCYC 2 cut(s) 246, 442
BbsI GAAGAC 1 cut(s) 827
Bbv12I GWGCWC 2 cut(s) 246, 442
BbvI GCAGC 4 cut(s) 187, 515, 760, 812
BceAI ACGGC 1 cut(s) 1015
BcgI CGANNNNNNTGC 2 cut(s) 626, 660
BciT130I CCWGG 1 cut(s) 758
BcnI CCSGG 2 cut(s) 1159, 1179
BcoDI GTCTC 4 cut(s) 530, 686, 990, 1168
BfaI CTAG 7 cut(s) 93, 426, 477, 692, 969, 1088, 1167
BfmI CTRYAG 1 cut(s) 201
BisI GCNGC 4 cut(s) 201, 504, 774, 801
BlsI GCNGC 4 cut(s) 202, 505, 775, 802
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 3 cut(s) 758, 1159, 1179
Bme18I GGWCC 1 cut(s) 290
BmeRI GACNNNNNGTC 1 cut(s) 828
BmgBI CACGTC 1 cut(s) 680
BmgT120I GGNCC 1 cut(s) 290
BmrFI CCNGG 3 cut(s) 758, 1159, 1179
BmsI GCATC 1 cut(s) 393
BoxI GACNNNNGTC 1 cut(s) 408
BpiI GAAGAC 1 cut(s) 827
BpuMI CCSGG 2 cut(s) 1159, 1179
BsaAI YACGTR 2 cut(s) 988, 1196
BsaI GGTCTC 1 cut(s) 1168
BsaJI CCNNGG 1 cut(s) 1178
BsaWI WCCGGW 1 cut(s) 355
BsaXI ACNNNNNCTCC 2 cut(s) 687, 717
Bsc4I CCNNNNNNNGG 2 cut(s) 573, 737
Bse1I ACTGG 3 cut(s) 32, 257, 578
BseAI TCCGGA 1 cut(s) 355
BseBI CCWGG 1 cut(s) 758
BseDI CCNNGG 1 cut(s) 1178
BseGI GGATG 3 cut(s) 93, 364, 454
BseLI CCNNNNNNNGG 2 cut(s) 573, 737
BseMII CTCAG 2 cut(s) 402, 774
BseNI ACTGG 3 cut(s) 32, 257, 578
BseRI GAGGAG 1 cut(s) 66
BseXI GCAGC 4 cut(s) 187, 515, 760, 812
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 1 cut(s) 1092
BsiEI CGRYCG 1 cut(s) 69
BsiHKAI GWGCWC 2 cut(s) 246, 442
BsiSI CCGG 3 cut(s) 356, 1158, 1178
BslFI GGGAC 1 cut(s) 360
BslI CCNNNNNNNGG 2 cut(s) 573, 737
BsmAI GTCTC 4 cut(s) 530, 686, 990, 1168
BsmBI CGTCTC 2 cut(s) 686, 990
BsmFI GGGAC 1 cut(s) 360
BsnI GGCC 1 cut(s) 1092
Bso31I GGTCTC 1 cut(s) 1168
Bsp1286I GDGCHC 2 cut(s) 246, 442
Bsp13I TCCGGA 1 cut(s) 355
Bsp143I GATC 4 cut(s) 66, 124, 952, 1199
BspACI CCGC 4 cut(s) 449, 1002, 1162, 1171
BspANI GGCC 1 cut(s) 1092
BspCNI CTCAG 2 cut(s) 401, 775
BspEI TCCGGA 1 cut(s) 355
BspHI TCATGA 2 cut(s) 600, 862
BspMAI CTGCAG 1 cut(s) 205
BspTNI GGTCTC 1 cut(s) 1168
BsrI ACTGG 3 cut(s) 32, 257, 578
BssECI CCNNGG 1 cut(s) 1178
BssMI GATC 4 cut(s) 66, 124, 952, 1199
Bst2UI CCWGG 1 cut(s) 758
Bst4CI ACNGT 2 cut(s) 492, 976
Bst6I CTCTTC 2 cut(s) 144, 1178
BstBAI YACGTR 2 cut(s) 988, 1196
BstC8I GCNNGC 1 cut(s) 564
BstDEI CTNAG 2 cut(s) 388, 783
BstF5I GGATG 3 cut(s) 93, 364, 454
BstKTI GATC 4 cut(s) 69, 127, 955, 1202
BstMAI GTCTC 4 cut(s) 530, 686, 990, 1168
BstMBI GATC 4 cut(s) 66, 124, 952, 1199
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 5 cut(s) 102, 209, 446, 999, 1168
BstNI CCWGG 1 cut(s) 758
BstNSI RCATGY 3 cut(s) 184, 339, 861
BstPAI GACNNNNGTC 1 cut(s) 408
BstSCI CCNGG 3 cut(s) 756, 1157, 1177
BstSFI CTRYAG 1 cut(s) 201
BstSNI TACGTA 1 cut(s) 1196
BstV1I GCAGC 4 cut(s) 187, 515, 760, 812
BstV2I GAAGAC 1 cut(s) 827
BsuRI GGCC 1 cut(s) 1092
BtrI CACGTC 1 cut(s) 680
BtsCI GGATG 3 cut(s) 93, 364, 454
Cac8I GCNNGC 1 cut(s) 564
CciI TCATGA 2 cut(s) 600, 862
Cfr13I GGNCC 1 cut(s) 290
CseI GACGC 1 cut(s) 792
CsiI ACCWGGT 1 cut(s) 756
Csp6I GTAC 3 cut(s) 571, 608, 965
CviAII CATG 7 cut(s) 119, 181, 336, 408, 601, 858, 863
CviQI GTAC 3 cut(s) 571, 608, 965
DdeI CTNAG 2 cut(s) 388, 783
DpnI GATC 4 cut(s) 68, 126, 954, 1201
DpnII GATC 4 cut(s) 66, 124, 952, 1199
DriI GACNNNNNGTC 1 cut(s) 828
Eam1104I CTCTTC 2 cut(s) 144, 1178
Eam1105I GACNNNNNGTC 1 cut(s) 828
EarI CTCTTC 2 cut(s) 144, 1178
EciI GGCGGA 2 cut(s) 1017, 1186
Ecl136II GAGCTC 2 cut(s) 244, 440
Eco105I TACGTA 1 cut(s) 1196
Eco24I GRGCYC 2 cut(s) 246, 442
Eco31I GGTCTC 1 cut(s) 1168
Eco47I GGWCC 1 cut(s) 290
Eco53kI GAGCTC 2 cut(s) 244, 440
EcoICRI GAGCTC 2 cut(s) 244, 440
EcoRII CCWGG 1 cut(s) 756
EcoT38I GRGCYC 2 cut(s) 246, 442
Esp3I CGTCTC 2 cut(s) 686, 990
FaeI CATG 7 cut(s) 122, 184, 339, 411, 604, 861, 866
FaqI GGGAC 1 cut(s) 360
FatI CATG 7 cut(s) 118, 180, 335, 407, 600, 857, 862
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 4 cut(s) 201, 504, 774, 801
FokI GGATG 3 cut(s) 100, 371, 441
FriOI GRGCYC 2 cut(s) 246, 442
Fsp4HI GCNGC 4 cut(s) 201, 504, 774, 801
FspBI CTAG 7 cut(s) 93, 426, 477, 692, 969, 1088, 1167
GluI GCNGC 4 cut(s) 201, 504, 774, 801
HaeIII GGCC 1 cut(s) 1092
HapII CCGG 3 cut(s) 356, 1158, 1178
HgaI GACGC 1 cut(s) 792
Hin1II CATG 7 cut(s) 122, 184, 339, 411, 604, 861, 866
HincII GTYRAC 1 cut(s) 763
HindII GTYRAC 1 cut(s) 763
HindIII AAGCTT 1 cut(s) 922
HinfI GANTC 7 cut(s) 149, 404, 523, 554, 580, 725, 1064
HpaII CCGG 3 cut(s) 356, 1158, 1178
Hpy166II GTNNAC 2 cut(s) 482, 763
Hpy188I TCNGA 6 cut(s) 229, 631, 784, 888, 1119, 1153
Hpy188III TCNNGA 7 cut(s) 191, 356, 527, 601, 833, 863, 1203
Hpy8I GTNNAC 2 cut(s) 482, 763
Hpy99I CGWCG 1 cut(s) 808
HpyAV CCTTC 1 cut(s) 323
HpyCH4III ACNGT 2 cut(s) 492, 976
HpyCH4IV ACGT 3 cut(s) 679, 987, 1195
HpyCH4V TGCA 3 cut(s) 203, 384, 1012
HpyF10VI GCNNNNNNNGC 5 cut(s) 102, 209, 446, 999, 1168
HpyF3I CTNAG 2 cut(s) 388, 783
HpySE526I ACGT 3 cut(s) 679, 987, 1195
Hsp92II CATG 7 cut(s) 122, 184, 339, 411, 604, 861, 866
Kpn2I TCCGGA 1 cut(s) 355
Kzo9I GATC 4 cut(s) 66, 124, 952, 1199
LmnI GCTCC 3 cut(s) 241, 437, 652
Lsp1109I GCAGC 4 cut(s) 187, 515, 760, 812
LweI GCATC 1 cut(s) 393
MabI ACCWGGT 1 cut(s) 756
MaeI CTAG 7 cut(s) 93, 426, 477, 692, 969, 1088, 1167
MaeII ACGT 3 cut(s) 679, 987, 1195
MaeIII GTNAC 2 cut(s) 943, 980
MalI GATC 4 cut(s) 68, 126, 954, 1201
MboI GATC 4 cut(s) 66, 124, 952, 1199
MboII GAAGA 9 cut(s) 110, 126, 131, 179, 308, 832, 952, 1132, 1195
MhlI GDGCHC 2 cut(s) 246, 442
MluCI AATT 5 cut(s) 9, 19, 170, 667, 882
MlyI GAGTC 3 cut(s) 398, 532, 574
MmeI TCCRAC 1 cut(s) 482
MnlI CCTC 6 cut(s) 8, 44, 689, 741, 916, 1123
MroI TCCGGA 1 cut(s) 355
MseI TTAA 3 cut(s) 468, 915, 1071
MspI CCGG 3 cut(s) 356, 1158, 1178
MspR9I CCNGG 3 cut(s) 758, 1159, 1179
MvaI CCWGG 1 cut(s) 758
MwoI GCNNNNNNNGC 5 cut(s) 102, 209, 446, 999, 1168
NciI CCSGG 2 cut(s) 1159, 1179
NdeII GATC 4 cut(s) 66, 124, 952, 1199
NlaIII CATG 7 cut(s) 122, 184, 339, 411, 604, 861, 866
NmeAIII GCCGAG 1 cut(s) 592
NmuCI GTSAC 1 cut(s) 943
NspI RCATGY 3 cut(s) 184, 339, 861
PagI TCATGA 2 cut(s) 600, 862
PciI ACATGT 2 cut(s) 180, 857
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PfeI GAWTC 4 cut(s) 149, 554, 725, 1064
PkrI GCNGC 4 cut(s) 202, 505, 775, 802
Ple19I CGATCG 1 cut(s) 69
PleI GAGTC 3 cut(s) 398, 531, 574
PpsI GAGTC 3 cut(s) 398, 531, 574
Ppu21I YACGTR 2 cut(s) 988, 1196
PscI ACATGT 2 cut(s) 180, 857
PshAI GACNNNNGTC 1 cut(s) 408
PsiI TTATAA 1 cut(s) 753
Psp124BI GAGCTC 2 cut(s) 246, 442
Psp6I CCWGG 1 cut(s) 756
PspGI CCWGG 1 cut(s) 756
PspPI GGNCC 1 cut(s) 290
PstI CTGCAG 1 cut(s) 205
PvuI CGATCG 1 cut(s) 69
RsaI GTAC 3 cut(s) 572, 609, 966
RsaNI GTAC 3 cut(s) 571, 608, 965
SacI GAGCTC 2 cut(s) 246, 442
SalI GTCGAC 1 cut(s) 761
SaqAI TTAA 3 cut(s) 468, 915, 1071
SatI GCNGC 4 cut(s) 201, 504, 774, 801
Sau3AI GATC 4 cut(s) 66, 124, 952, 1199
Sau96I GGNCC 1 cut(s) 290
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 3 cut(s) 398, 532, 574
ScrFI CCNGG 3 cut(s) 758, 1159, 1179
SduI GDGCHC 2 cut(s) 246, 442
SexAI ACCWGGT 1 cut(s) 756
SfaNI GCATC 1 cut(s) 393
SfcI CTRYAG 1 cut(s) 201
SinI GGWCC 1 cut(s) 290
SnaBI TACGTA 1 cut(s) 1196
Sse9I AATT 5 cut(s) 9, 19, 170, 667, 882
SsiI CCGC 4 cut(s) 449, 1002, 1162, 1171
SspMI CTAG 7 cut(s) 93, 426, 477, 692, 969, 1088, 1167
SstI GAGCTC 2 cut(s) 246, 442
StyD4I CCNGG 3 cut(s) 756, 1157, 1177
TaaI ACNGT 2 cut(s) 492, 976
TaiI ACGT 3 cut(s) 682, 990, 1198
TaqI TCGA 6 cut(s) 123, 442, 521, 528, 762, 1202
TasI AATT 5 cut(s) 9, 19, 170, 667, 882
TatI WGTACW 1 cut(s) 570
TfiI GAWTC 4 cut(s) 149, 554, 725, 1064
Tru1I TTAA 3 cut(s) 468, 915, 1071
Tru9I TTAA 3 cut(s) 468, 915, 1071
TseFI GTSAC 1 cut(s) 943
TseI GCWGC 4 cut(s) 200, 503, 773, 800
Tsp45I GTSAC 1 cut(s) 943
TspDTI ATGAA 4 cut(s) 443, 863, 1032, 1077
TspGWI ACGGA 2 cut(s) 63, 945
VpaK11BI GGWCC 1 cut(s) 290
XceI RCATGY 3 cut(s) 184, 339, 861
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 7 cut(s) 93, 426, 477, 692, 969, 1088, 1167
ZrmI AGTACT 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.