Prupe.1G438200_v2.0.a1

Eukaryotic protein of unknown function (DUF829)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0008692
Physical Location & Seq
Reverse (-)
37296436 .. 37300135
3700 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G438200.1

Sequence Viewer

Length: 1248 bp
ATGTGGGGATTTGGGGGTAGGTATTATTGGGGAAGAAAGAAGAGGAGTGATGAAATTGAAGGGATAGTGGTGGTGTTTGCATGGATGTCGAGCCAAGAGCGGCACTTGAAGAGCTATGTGGAGCTTTACTCGTCTATTGGTTGGAACACACTCGTCTGCCACGCCCAATTTCTCAATATGTTCTTTCCTGAGAAGGCTACAACTTTAGCGACTGATATTCTGAATGAACTTCTTGAGGAGTTGAAGATTAAGCCTTGCCCCGTGGTCTTTGCCTCTTTTTCTGGTGGTCCAAAAGCCTGTATGTTCAAAGTTATTCAGATAATTGAGGGAACTTGTGAAGCAAAACTGAATCTGGATGATTGTCGACTGGTTAGGGACTGTATTTCTGGCCACATCTATGATTCCAGTCCAGTGGACTTTACTAGTGATCTGGGTACTAAATTTGTTCTTCACCCAAATGTCCTGAACATATCCCATCCACCGAGATTCGCATCCTGGATGGCGAATGGCATTGCTTCTGGCCTTGATGCCCTCTTCCTCAACCGGTTTGAGTCACACCGTGCCGAGTATTGGCAGACTCTCTACTCCACTGTTGGCATGCAGGCCCCATATCTAATCTTATGCTCAGAGAACGATGATCTCGCTCCATTTCAAGTTATATATAATTTTTCTCAACGCTTACGAGAACTTGGGGCTGATGTTAAACTAGTAAAATGGAATGGCTCTCCTCACGTAGACCATTACAGGCATTATCCAATTGATTACAAGGCTGCTGTAACTGAGCTCCTTGGTAAAGCAGTTGGAGTTTATTCTCAAAGAATTCGACGACTGGAAGCAGAAACATCGGGTATGCAGGCAGCACAAGATGAGATCATTGACAATGAACCGATGAGTAGTCTCAGAAAAGCTGCTGGTGGCTCAAATGGGTTTCGAGGAGTCACTCTGGCATCCAGTGATCACTTCTTCACGCCCGGTTCAATGGAGTATGATGGAGGCAGAGATGTTGGGTCCATGCAAGACGAGCGCAAGGAAGGTTTGATTCACCTGCCTAACCCGCCAACGCCAACCATGAATGTCCATGGTGTCCTCGGTCAGATACTTTTTGACATCTGTGTTCCGAAAACTGTTGAGGATTGGGATATAAAATCATCGTCGGGCTCTTTGAATGGGAACCGCCGTTCATTGGCTTCAAGAAGAAGGCATGCCCCTTTTAATCCAATCAAGTGCATACGTCGGTCAAGATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF829

Protein Analysis

416

Amino Acids

46.7

Weight (kDa)

7.2

Isoelectric Point (pI)

48.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1053
Acc36I ACCTGC 1 cut(s) 1053
AccBSI CCGCTC 1 cut(s) 100
AccI GTMKAC 2 cut(s) 364, 735
AciI CCGC 3 cut(s) 100, 1055, 1174
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 2 cut(s) 440, 819
AdeI CACNNNGTG 1 cut(s) 560
AfaI GTAC 1 cut(s) 436
AfiI CCNNNNNNNGG 2 cut(s) 570, 1183
AgeI ACCGGT 1 cut(s) 543
AgsI TTSAA 8 cut(s) 59, 109, 244, 307, 653, 978, 1165, 1191
AhlI ACTAGT 2 cut(s) 422, 706
AjnI CCWGG 1 cut(s) 494
AloI GAACNNNNNNTCC 2 cut(s) 1162, 1194
AluBI AGCT 4 cut(s) 114, 124, 784, 908
AluI AGCT 4 cut(s) 114, 124, 784, 908
Alw21I GWGCWC 1 cut(s) 786
Alw26I GTCTC 1 cut(s) 902
AoxI GGCC 3 cut(s) 388, 520, 603
ApeKI GCWGC 3 cut(s) 770, 857, 908
ApoI RAATTY 2 cut(s) 440, 819
AsiGI ACCGGT 1 cut(s) 543
AspLEI GCGC 1 cut(s) 1026
AspS9I GGNCC 3 cut(s) 287, 604, 1008
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 2 cut(s) 443, 1034
AvaII GGWCC 2 cut(s) 287, 1008
BalI TGGCCA 1 cut(s) 390
BanII GRGCYC 2 cut(s) 786, 1160
Bbv12I GWGCWC 1 cut(s) 786
BbvI GCAGC 3 cut(s) 757, 869, 895
BccI CCATC 3 cut(s) 483, 493, 983
BceAI ACGGC 1 cut(s) 1161
BcgI CGANNNNNNTGC 4 cut(s) 69, 103, 825, 859
BciT130I CCWGG 1 cut(s) 496
BclI TGATCA 1 cut(s) 955
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 1 cut(s) 902
BcuI ACTAGT 2 cut(s) 422, 706
BfaI CTAG 2 cut(s) 423, 707
BfuAI ACCTGC 1 cut(s) 1053
BisI GCNGC 4 cut(s) 101, 771, 858, 909
BlsI GCNGC 4 cut(s) 102, 772, 859, 910
Bme1390I CCNGG 2 cut(s) 496, 972
Bme18I GGWCC 2 cut(s) 287, 1008
BmgT120I GGNCC 3 cut(s) 287, 604, 1008
BmiI GGNNCC 3 cut(s) 606, 1009, 1172
BmrFI CCNGG 2 cut(s) 496, 972
BmsI GCATC 3 cut(s) 500, 517, 956
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BpuEI CTTGAG 1 cut(s) 254
BpuMI CCSGG 1 cut(s) 972
BsaAI YACGTR 1 cut(s) 733
BsaBI GATNNNNATC 1 cut(s) 490
BsaJI CCNNGG 4 cut(s) 261, 787, 1078, 1087
BsaWI WCCGGW 1 cut(s) 543
Bsc4I CCNNNNNNNGG 2 cut(s) 570, 1183
Bse118I RCCGGY 1 cut(s) 543
Bse1I ACTGG 5 cut(s) 372, 405, 410, 834, 951
Bse3DI GCAATG 1 cut(s) 510
Bse8I GATNNNNATC 1 cut(s) 490
BseBI CCWGG 1 cut(s) 496
BseDI CCNNGG 4 cut(s) 261, 787, 1078, 1087
BseGI GGATG 6 cut(s) 90, 361, 475, 491, 504, 947
BseJI GATNNNNATC 1 cut(s) 490
BseLI CCNNNNNNNGG 2 cut(s) 570, 1183
BseMI GCAATG 1 cut(s) 510
BseMII CTCAG 4 cut(s) 180, 639, 771, 913
BseNI ACTGG 5 cut(s) 372, 405, 410, 834, 951
BseRI GAGGAG 4 cut(s) 58, 251, 717, 948
BseXI GCAGC 3 cut(s) 757, 869, 895
BshFI GGCC 3 cut(s) 390, 522, 605
BshTI ACCGGT 1 cut(s) 543
BsiHKAI GWGCWC 1 cut(s) 786
BsiSI CCGG 2 cut(s) 544, 972
BslFI GGGAC 1 cut(s) 389
BslI CCNNNNNNNGG 2 cut(s) 570, 1183
BsmAI GTCTC 1 cut(s) 902
BsmFI GGGAC 1 cut(s) 389
BsnI GGCC 3 cut(s) 390, 522, 605
Bsp1286I GDGCHC 2 cut(s) 786, 1160
Bsp143I GATC 4 cut(s) 427, 637, 870, 955
Bsp19I CCATGG 1 cut(s) 1078
BspACI CCGC 3 cut(s) 100, 1055, 1174
BspANI GGCC 3 cut(s) 390, 522, 605
BspCNI CTCAG 4 cut(s) 181, 638, 772, 912
BspLI GGNNCC 3 cut(s) 606, 1009, 1172
BspMI ACCTGC 1 cut(s) 1053
BspQI GCTCTTC 1 cut(s) 104
BsrBI CCGCTC 1 cut(s) 100
BsrDI GCAATG 1 cut(s) 510
BsrFI RCCGGY 1 cut(s) 543
BsrI ACTGG 5 cut(s) 372, 405, 410, 834, 951
BssAI RCCGGY 1 cut(s) 543
BssECI CCNNGG 4 cut(s) 261, 787, 1078, 1087
BssMI GATC 4 cut(s) 427, 637, 870, 955
BssT1I CCWWGG 2 cut(s) 787, 1078
Bst2UI CCWGG 1 cut(s) 496
Bst4CI ACNGT 4 cut(s) 380, 560, 592, 1126
Bst6I CTCTTC 3 cut(s) 35, 104, 539
BstBAI YACGTR 1 cut(s) 733
BstC8I GCNNGC 4 cut(s) 599, 603, 855, 1203
BstDEI CTNAG 4 cut(s) 189, 625, 780, 899
BstDSI CCRYGG 2 cut(s) 261, 1078
BstF5I GGATG 6 cut(s) 90, 361, 475, 491, 504, 947
BstHHI GCGC 1 cut(s) 1026
BstKTI GATC 4 cut(s) 430, 640, 873, 958
BstMAI GTCTC 1 cut(s) 902
BstMBI GATC 4 cut(s) 427, 637, 870, 955
BstMWI GCNNNNNNNGC 2 cut(s) 1021, 1054
BstNI CCWGG 1 cut(s) 496
BstNSI RCATGY 2 cut(s) 601, 1205
BstSCI CCNGG 2 cut(s) 494, 970
BstV1I GCAGC 3 cut(s) 757, 869, 895
BstXI CCANNNNNNTGG 1 cut(s) 412
BsuRI GGCC 3 cut(s) 390, 522, 605
BtgI CCRYGG 2 cut(s) 261, 1078
BtsCI GGATG 6 cut(s) 90, 361, 475, 491, 504, 947
BtsIMutI CAGTG 3 cut(s) 417, 588, 958
BveI ACCTGC 1 cut(s) 1053
Cac8I GCNNGC 4 cut(s) 599, 603, 855, 1203
CfoI GCGC 1 cut(s) 1026
Cfr10I RCCGGY 1 cut(s) 543
Cfr13I GGNCC 3 cut(s) 287, 604, 1008
Csp6I GTAC 1 cut(s) 435
CspAI ACCGGT 1 cut(s) 543
CviAII CATG 6 cut(s) 81, 598, 1012, 1069, 1079, 1202
CviQI GTAC 1 cut(s) 435
DdeI CTNAG 4 cut(s) 189, 625, 780, 899
DpnI GATC 4 cut(s) 429, 639, 872, 957
DpnII GATC 4 cut(s) 427, 637, 870, 955
DraIII CACNNNGTG 1 cut(s) 560
EaeI YGGCCR 1 cut(s) 388
Eam1104I CTCTTC 3 cut(s) 35, 104, 539
EarI CTCTTC 3 cut(s) 35, 104, 539
Ecl136II GAGCTC 1 cut(s) 784
Eco130I CCWWGG 2 cut(s) 787, 1078
Eco24I GRGCYC 2 cut(s) 786, 1160
Eco47I GGWCC 2 cut(s) 287, 1008
Eco53kI GAGCTC 1 cut(s) 784
EcoICRI GAGCTC 1 cut(s) 784
EcoO109I RGGNCCY 1 cut(s) 604
EcoRI GAATTC 1 cut(s) 819
EcoRII CCWGG 1 cut(s) 494
EcoT14I CCWWGG 2 cut(s) 787, 1078
EcoT38I GRGCYC 2 cut(s) 786, 1160
ErhI CCWWGG 2 cut(s) 787, 1078
FaeI CATG 6 cut(s) 84, 601, 1015, 1072, 1082, 1205
FaqI GGGAC 1 cut(s) 389
FatI CATG 6 cut(s) 80, 597, 1011, 1068, 1078, 1201
FauI CCCGC 1 cut(s) 1062
FbaI TGATCA 1 cut(s) 955
FblI GTMKAC 2 cut(s) 364, 735
Fnu4HI GCNGC 4 cut(s) 101, 771, 858, 909
FokI GGATG 6 cut(s) 97, 368, 462, 478, 511, 934
FriOI GRGCYC 2 cut(s) 786, 1160
Fsp4HI GCNGC 4 cut(s) 101, 771, 858, 909
FspBI CTAG 2 cut(s) 423, 707
GlaI GCGC 1 cut(s) 1025
GluI GCNGC 4 cut(s) 101, 771, 858, 909
HaeIII GGCC 3 cut(s) 390, 522, 605
HapII CCGG 2 cut(s) 544, 972
HhaI GCGC 1 cut(s) 1026
Hin1II CATG 6 cut(s) 84, 601, 1015, 1072, 1082, 1205
Hin6I GCGC 1 cut(s) 1024
HinP1I GCGC 1 cut(s) 1024
HincII GTYRAC 1 cut(s) 365
HindII GTYRAC 1 cut(s) 365
HinfI GANTC 7 cut(s) 349, 401, 486, 551, 577, 936, 1039
HpaII CCGG 2 cut(s) 544, 972
HphI GGTGA 2 cut(s) 443, 1034
Hpy166II GTNNAC 3 cut(s) 365, 415, 736
Hpy188I TCNGA 6 cut(s) 222, 318, 628, 902, 1095, 1119
Hpy188III TCNNGA 6 cut(s) 188, 233, 353, 463, 1191, 1239
Hpy8I GTNNAC 3 cut(s) 365, 415, 736
Hpy99I CGWCG 3 cut(s) 828, 1156, 1236
HpyAV CCTTC 4 cut(s) 53, 187, 1025, 1191
HpyCH4III ACNGT 4 cut(s) 380, 560, 592, 1126
HpyCH4IV ACGT 2 cut(s) 732, 1231
HpyCH4V TGCA 5 cut(s) 80, 601, 853, 1015, 1227
HpyF10VI GCNNNNNNNGC 2 cut(s) 1021, 1054
HpyF3I CTNAG 4 cut(s) 189, 625, 780, 899
HpySE526I ACGT 2 cut(s) 732, 1231
Hsp92II CATG 6 cut(s) 84, 601, 1015, 1072, 1082, 1205
HspAI GCGC 1 cut(s) 1024
Ksp22I TGATCA 1 cut(s) 955
Kzo9I GATC 4 cut(s) 427, 637, 870, 955
LguI GCTCTTC 1 cut(s) 104
LmnI GCTCC 3 cut(s) 121, 649, 789
Lsp1109I GCAGC 3 cut(s) 757, 869, 895
LweI GCATC 3 cut(s) 500, 517, 956
MaeI CTAG 2 cut(s) 423, 707
MaeII ACGT 2 cut(s) 732, 1231
MaeIII GTNAC 3 cut(s) 552, 775, 937
MalI GATC 4 cut(s) 429, 639, 872, 957
MbiI CCGCTC 1 cut(s) 100
MboI GATC 4 cut(s) 427, 637, 870, 955
MboII GAAGA 8 cut(s) 45, 52, 121, 256, 440, 526, 955, 1206
MfeI CAATTG 1 cut(s) 756
MhlI GDGCHC 2 cut(s) 786, 1160
MlsI TGGCCA 1 cut(s) 390
MluCI AATT 7 cut(s) 54, 167, 321, 440, 664, 756, 819
MluNI TGGCCA 1 cut(s) 390
MlyI GAGTC 3 cut(s) 560, 571, 945
MmeI TCCRAC 2 cut(s) 122, 781
Mox20I TGGCCA 1 cut(s) 390
MscI TGGCCA 1 cut(s) 390
MseI TTAA 3 cut(s) 249, 702, 1212
MslI CAYNNNNRTG 2 cut(s) 396, 456
Msp20I TGGCCA 1 cut(s) 390
MspI CCGG 2 cut(s) 544, 972
MspR9I CCNGG 2 cut(s) 496, 972
MunI CAATTG 1 cut(s) 756
MvaI CCWGG 1 cut(s) 496
MwoI GCNNNNNNNGC 2 cut(s) 1021, 1054
NciI CCSGG 1 cut(s) 972
NcoI CCATGG 1 cut(s) 1078
NdeII GATC 4 cut(s) 427, 637, 870, 955
NlaIII CATG 6 cut(s) 84, 601, 1015, 1072, 1082, 1205
NlaIV GGNNCC 3 cut(s) 606, 1009, 1172
NmeAIII GCCGAG 1 cut(s) 589
NmuCI GTSAC 2 cut(s) 552, 937
NspI RCATGY 2 cut(s) 601, 1205
PaeI GCATGC 2 cut(s) 601, 1205
PaqCI CACCTGC 1 cut(s) 1053
PciSI GCTCTTC 1 cut(s) 104
PfeI GAWTC 4 cut(s) 349, 401, 486, 1039
PfoI TCCNGGA 1 cut(s) 494
PinAI ACCGGT 1 cut(s) 543
PkrI GCNGC 4 cut(s) 102, 772, 859, 910
PleI GAGTC 3 cut(s) 559, 571, 944
PpsI GAGTC 3 cut(s) 559, 571, 944
Ppu21I YACGTR 1 cut(s) 733
Psp124BI GAGCTC 1 cut(s) 786
Psp6I CCWGG 1 cut(s) 494
PspGI CCWGG 1 cut(s) 494
PspN4I GGNNCC 3 cut(s) 606, 1009, 1172
PspPI GGNCC 3 cut(s) 287, 604, 1008
RsaI GTAC 1 cut(s) 436
RsaNI GTAC 1 cut(s) 435
RseI CAYNNNNRTG 2 cut(s) 396, 456
SacI GAGCTC 1 cut(s) 786
SalI GTCGAC 1 cut(s) 363
SapI GCTCTTC 1 cut(s) 104
SaqAI TTAA 3 cut(s) 249, 702, 1212
SatI GCNGC 4 cut(s) 101, 771, 858, 909
Sau3AI GATC 4 cut(s) 427, 637, 870, 955
Sau96I GGNCC 3 cut(s) 287, 604, 1008
SchI GAGTC 3 cut(s) 560, 571, 945
ScrFI CCNGG 2 cut(s) 496, 972
SduI GDGCHC 2 cut(s) 786, 1160
SetI ASST 9 cut(s) 23, 116, 126, 735, 786, 910, 1036, 1047, 1234
SfaNI GCATC 3 cut(s) 500, 517, 956
SinI GGWCC 2 cut(s) 287, 1008
SmiMI CAYNNNNRTG 2 cut(s) 396, 456
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
SpeI ACTAGT 2 cut(s) 422, 706
SphI GCATGC 2 cut(s) 601, 1205
Sse9I AATT 7 cut(s) 54, 167, 321, 440, 664, 756, 819
SsiI CCGC 3 cut(s) 100, 1055, 1174
SspMI CTAG 2 cut(s) 423, 707
SstI GAGCTC 1 cut(s) 786
StyD4I CCNGG 2 cut(s) 494, 970
StyI CCWWGG 2 cut(s) 787, 1078
TaaI ACNGT 4 cut(s) 380, 560, 592, 1126
TaiI ACGT 2 cut(s) 735, 1234
TaqI TCGA 4 cut(s) 89, 364, 823, 931
TaqII GACCGA 2 cut(s) 1079, 1224
TasI AATT 7 cut(s) 54, 167, 321, 440, 664, 756, 819
TauI GCSGC 1 cut(s) 103
TfiI GAWTC 4 cut(s) 349, 401, 486, 1039
Tru1I TTAA 3 cut(s) 249, 702, 1212
Tru9I TTAA 3 cut(s) 249, 702, 1212
TscAI CASTG 3 cut(s) 417, 595, 958
TseFI GTSAC 2 cut(s) 552, 937
TseI GCWGC 3 cut(s) 770, 857, 908
Tsp45I GTSAC 2 cut(s) 552, 937
TspDTI ATGAA 5 cut(s) 66, 240, 897, 1085, 1170
TspRI CASTG 3 cut(s) 417, 595, 958
VpaK11BI GGWCC 2 cut(s) 287, 1008
XapI RAATTY 2 cut(s) 440, 819
XceI RCATGY 2 cut(s) 601, 1205
XmiI GTMKAC 2 cut(s) 364, 735
XspI CTAG 2 cut(s) 423, 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.