MD08G1103200.v1.1

Eukaryotic protein of unknown function (DUF829)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
8739812 .. 8743881
4070 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1103200.v1.1.491

Sequence Viewer

Length: 1254 bp
ATGTGGGGGCTCGGGAATCAGTGCTATTGGGGGAGGAAGGAGCTGCGGAGCGATGGGATTGAAGGGATAGTGGTGGTGTTTGCGTGGATGTCGAGCCAGGAGTGGCAGCTGAAGAGCTTCGTGGAGCTCTACTCGTCTCTGGGTTGGAACTCACTCGTCAGCCACTCCCAGTTTCTCAATATGTTCTTCCCCAAGAAGGTTACAGCTATAGCGATGGATATTCTAAATGAACTTGTTGAGGAGTTGAAGATTAAGCCTTGCCCAGTGGTCTTTGCTTCTCTTTCTGGTGGTCCAAAAGCCTGTATGCTAAAAGTTCTTCAGATAATTGAGGGAACTTGTGAAGCAAAATTGAATCTGAATGATTGCCGATTAGTTAAAGACTGTATTGCCGGCCACATCTATGATTCGAGTCCAGTGGACTTTACTTGTGATCTGGGTGCTAAATTTGTTCTTCACCCAAGTGTCCTGAAAATATCCAAGCCACCAAGATTTGCATCCTGGATGGTGCATAGCATTGCATCTGGGCTCGATGCGCTCTTTCTCAACAGGTTTGAGTCACAGCGTGCTGAGTACTGGCAGACTGTCTACTCCACCATTGGCATGCAGGCCCCGTATCTCATCTTATGCTCAGAGAATGACGATCTTGCTCCCTATCAAGTTATCTATAATTTTTCGCAGCGCTTACGAGAACTTGGGGCTGATGTTAAACTAGTAAAATGGAATGACTCTCCTCACGTAGGTCACTACAGGCGTTATCCAATTGATTACAAAGTTGCTGTAAATGAGCTCCTTGGTCAAGCGGCGGGAGTTTATTCTCAAAGAATTAGAGGGCTGGAAGGAGAAACATTGGGCATGCAGGCAATACAAGATGAGATCATTGACAATGAACCGATGAGTAGCATTAGAAAAGCTGCGGGAGGCTCAAATGGGTTTCGAGGAGTCACTCTGGCCCCAAGCGATCACTTCTTCACCACGCCCTTCTCAATGGAGTACGAGGGAGGTAGAGATGTTGGGTCAATGCAGGAAGAACGCAAGGAAGGGATAATTCACGTGCATAACCCGCCAACTCCAAGCATGAACGCCCACGGGGTTCTTGGGCAGATCCTTTTTGACGTCTGTGTTCCGAAGACTGTTGAGGATTGGGATATAAAGCCGTCATCGGGTTCTTTGAACGGGAATGGCAGCTCACTCGCTTCAAGAAGACGACATGCCCCCTTTAATCCAATCAAGTGCATCCGTCGCTCAAGATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

418

Amino Acids

46.64

Weight (kDa)

6.83

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF829 PF05705 23 - 114 5.2e-07 Eukaryotic protein of unknown function (DUF829)
DUF829 PF05705 129 - 211 1e-09 Eukaryotic protein of unknown function (DUF829)
DUF829 PF05705 203 - 262 5.5e-09 Eukaryotic protein of unknown function (DUF829)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1252
AatII GACGTC 1 cut(s) 1116
AccI GTMKAC 1 cut(s) 585
AciI CCGC 5 cut(s) 46, 800, 803, 914, 1061
AclWI GGATC 1 cut(s) 1096
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 1 cut(s) 443
AcuI CTGAAG 2 cut(s) 131, 302
AcvI CACGTG 1 cut(s) 1051
AcyI GRCGYC 1 cut(s) 1113
AdeI CACNNNGTG 1 cut(s) 563
AfaI GTAC 2 cut(s) 572, 992
AfeI AGCGCT 1 cut(s) 680
AfiI CCNNNNNNNGG 3 cut(s) 196, 737, 1160
AgsI TTSAA 5 cut(s) 62, 247, 352, 1171, 1197
AhlI ACTAGT 1 cut(s) 709
AjnI CCWGG 2 cut(s) 96, 497
AleI CACNNNNGTG 1 cut(s) 459
AluBI AGCT 8 cut(s) 43, 109, 117, 127, 206, 787, 911, 1185
AluI AGCT 8 cut(s) 43, 109, 117, 127, 206, 787, 911, 1185
Alw21I GWGCWC 2 cut(s) 129, 789
Alw26I GTCTC 1 cut(s) 141
AlwI GGATC 1 cut(s) 1096
Ama87I CYCGRG 1 cut(s) 11
Aor51HI AGCGCT 1 cut(s) 680
AoxI GGCC 3 cut(s) 391, 606, 948
ApeKI GCWGC 5 cut(s) 43, 106, 676, 911, 1182
ApoI RAATTY 1 cut(s) 443
Asp700I GAANNNNTTC 1 cut(s) 116
AspLEI GCGC 2 cut(s) 535, 681
AspS9I GGNCC 3 cut(s) 290, 607, 949
AsuHPI GGTGA 2 cut(s) 446, 961
AvaI CYCGRG 1 cut(s) 11
AvaII GGWCC 1 cut(s) 290
BanII GRGCYC 4 cut(s) 12, 129, 528, 789
BbrPI CACGTG 1 cut(s) 1051
BbsI GAAGAC 2 cut(s) 1133, 1207
Bbv12I GWGCWC 2 cut(s) 129, 789
BbvI GCAGC 5 cut(s) 30, 118, 688, 898, 1194
BccI CCATC 3 cut(s) 47, 208, 496
BceAI ACGGC 1 cut(s) 1138
BcgI CGANNNNNNTGC 2 cut(s) 1171, 1205
BciT130I CCWGG 2 cut(s) 98, 499
BcoDI GTCTC 1 cut(s) 141
BcuI ACTAGT 1 cut(s) 709
BfaI CTAG 1 cut(s) 710
BfmI CTRYAG 2 cut(s) 207, 745
BfoI RGCGCY 1 cut(s) 682
BisI GCNGC 6 cut(s) 44, 107, 677, 801, 912, 1183
BlsI GCNGC 6 cut(s) 45, 108, 678, 802, 913, 1184
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 2 cut(s) 98, 499
Bme18I GGWCC 1 cut(s) 290
BmeT110I CYCGRG 1 cut(s) 11
BmgT120I GGNCC 3 cut(s) 290, 607, 949
BmiI GGNNCC 2 cut(s) 609, 951
BmrFI CCNGG 2 cut(s) 98, 499
BmrI ACTGGG 2 cut(s) 163, 257
BmsI GCATC 4 cut(s) 503, 520, 527, 1242
BmuI ACTGGG 2 cut(s) 163, 257
BpiI GAAGAC 2 cut(s) 1133, 1207
BplI GAGNNNNNCTC 2 cut(s) 116, 148
BpuEI CTTGAG 1 cut(s) 1228
BsaAI YACGTR 2 cut(s) 736, 1051
BsaBI GATNNNNATC 1 cut(s) 493
BsaHI GRCGYC 1 cut(s) 1113
BsaJI CCNNGG 2 cut(s) 790, 1084
Bsc4I CCNNNNNNNGG 3 cut(s) 196, 737, 1160
Bse118I RCCGGY 1 cut(s) 389
Bse1I ACTGG 4 cut(s) 169, 263, 413, 578
Bse3DI GCAATG 1 cut(s) 513
Bse8I GATNNNNATC 1 cut(s) 493
BseBI CCWGG 2 cut(s) 98, 499
BseDI CCNNGG 2 cut(s) 790, 1084
BseGI GGATG 4 cut(s) 93, 494, 507, 1233
BseJI GATNNNNATC 1 cut(s) 493
BseLI CCNNNNNNNGG 3 cut(s) 196, 737, 1160
BseMI GCAATG 1 cut(s) 513
BseMII CTCAG 2 cut(s) 558, 642
BseNI ACTGG 4 cut(s) 169, 263, 413, 578
BseRI GAGGAG 3 cut(s) 254, 720, 951
BseXI GCAGC 5 cut(s) 30, 118, 688, 898, 1194
BshFI GGCC 3 cut(s) 393, 608, 950
BsiHKAI GWGCWC 2 cut(s) 129, 789
BsiHKCI CYCGRG 1 cut(s) 11
BsiSI CCGG 1 cut(s) 390
BslI CCNNNNNNNGG 3 cut(s) 196, 737, 1160
BsmAI GTCTC 1 cut(s) 141
BsmBI CGTCTC 1 cut(s) 141
BsnI GGCC 3 cut(s) 393, 608, 950
BsoBI CYCGRG 1 cut(s) 11
Bsp1286I GDGCHC 4 cut(s) 12, 129, 528, 789
Bsp143I GATC 5 cut(s) 430, 640, 873, 958, 1101
BspACI CCGC 5 cut(s) 46, 800, 803, 914, 1061
BspANI GGCC 3 cut(s) 393, 608, 950
BspCNI CTCAG 2 cut(s) 559, 641
BspLI GGNNCC 2 cut(s) 609, 951
BspPI GGATC 1 cut(s) 1096
BspQI GCTCTTC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 513
BsrFI RCCGGY 1 cut(s) 389
BsrI ACTGG 4 cut(s) 169, 263, 413, 578
BssAI RCCGGY 1 cut(s) 389
BssECI CCNNGG 2 cut(s) 790, 1084
BssMI GATC 5 cut(s) 430, 640, 873, 958, 1101
BssNI GRCGYC 1 cut(s) 1113
BssT1I CCWWGG 1 cut(s) 790
Bst2UI CCWGG 2 cut(s) 98, 499
Bst4CI ACNGT 3 cut(s) 383, 583, 1132
Bst6I CTCTTC 1 cut(s) 107
BstACI GRCGYC 1 cut(s) 1113
BstBAI YACGTR 2 cut(s) 736, 1051
BstC8I GCNNGC 6 cut(s) 391, 564, 602, 606, 854, 858
BstDEI CTNAG 2 cut(s) 567, 628
BstDSI CCRYGG 1 cut(s) 1084
BstENI CCTNNNNNAGG 1 cut(s) 735
BstF5I GGATG 4 cut(s) 93, 494, 507, 1233
BstH2I RGCGCY 1 cut(s) 682
BstHHI GCGC 2 cut(s) 535, 681
BstKTI GATC 5 cut(s) 433, 643, 876, 961, 1104
BstMAI GTCTC 1 cut(s) 141
BstMBI GATC 5 cut(s) 430, 640, 873, 958, 1101
BstMWI GCNNNNNNNGC 3 cut(s) 532, 1060, 1239
BstNI CCWGG 2 cut(s) 98, 499
BstNSI RCATGY 3 cut(s) 604, 856, 1211
BstSCI CCNGG 2 cut(s) 96, 497
BstSFI CTRYAG 2 cut(s) 207, 745
BstV1I GCAGC 5 cut(s) 30, 118, 688, 898, 1194
BstV2I GAAGAC 2 cut(s) 1133, 1207
BstX2I RGATCY 1 cut(s) 1101
BstYI RGATCY 1 cut(s) 1101
BsuRI GGCC 3 cut(s) 393, 608, 950
BtgI CCRYGG 1 cut(s) 1084
BtgZI GCGATG 2 cut(s) 66, 227
BtsCI GGATG 4 cut(s) 93, 494, 507, 1233
BtsIMutI CAGTG 3 cut(s) 26, 270, 420
Cac8I GCNNGC 6 cut(s) 391, 564, 602, 606, 854, 858
CfoI GCGC 2 cut(s) 535, 681
Cfr10I RCCGGY 1 cut(s) 389
Cfr13I GGNCC 3 cut(s) 290, 607, 949
Csp6I GTAC 2 cut(s) 571, 991
CviAII CATG 4 cut(s) 601, 853, 1075, 1208
CviQI GTAC 2 cut(s) 571, 991
DdeI CTNAG 2 cut(s) 567, 628
DpnI GATC 5 cut(s) 432, 642, 875, 960, 1103
DpnII GATC 5 cut(s) 430, 640, 873, 958, 1101
DraIII CACNNNGTG 1 cut(s) 563
EaeI YGGCCR 1 cut(s) 391
Eam1104I CTCTTC 1 cut(s) 107
EarI CTCTTC 1 cut(s) 107
Ecl136II GAGCTC 2 cut(s) 127, 787
Eco130I CCWWGG 1 cut(s) 790
Eco24I GRGCYC 4 cut(s) 12, 129, 528, 789
Eco47I GGWCC 1 cut(s) 290
Eco47III AGCGCT 1 cut(s) 680
Eco53kI GAGCTC 2 cut(s) 127, 787
Eco57I CTGAAG 2 cut(s) 131, 302
Eco72I CACGTG 1 cut(s) 1051
Eco88I CYCGRG 1 cut(s) 11
EcoICRI GAGCTC 2 cut(s) 127, 787
EcoNI CCTNNNNNAGG 1 cut(s) 735
EcoO109I RGGNCCY 1 cut(s) 607
EcoRII CCWGG 2 cut(s) 96, 497
EcoT14I CCWWGG 1 cut(s) 790
EcoT38I GRGCYC 4 cut(s) 12, 129, 528, 789
ErhI CCWWGG 1 cut(s) 790
Esp3I CGTCTC 1 cut(s) 141
FaeI CATG 4 cut(s) 604, 856, 1078, 1211
FatI CATG 4 cut(s) 600, 852, 1074, 1207
FauI CCCGC 3 cut(s) 796, 907, 1068
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 6 cut(s) 44, 107, 677, 801, 912, 1183
FokI GGATG 4 cut(s) 100, 481, 514, 1220
FriOI GRGCYC 4 cut(s) 12, 129, 528, 789
Fsp4HI GCNGC 6 cut(s) 44, 107, 677, 801, 912, 1183
FspBI CTAG 1 cut(s) 710
GlaI GCGC 2 cut(s) 534, 680
GluI GCNGC 6 cut(s) 44, 107, 677, 801, 912, 1183
HaeII RGCGCY 1 cut(s) 682
HaeIII GGCC 3 cut(s) 393, 608, 950
HapII CCGG 1 cut(s) 390
HhaI GCGC 2 cut(s) 535, 681
Hin1I GRCGYC 1 cut(s) 1113
Hin1II CATG 4 cut(s) 604, 856, 1078, 1211
Hin6I GCGC 2 cut(s) 533, 679
HinP1I GCGC 2 cut(s) 533, 679
HinfI GANTC 7 cut(s) 16, 352, 404, 409, 554, 725, 939
HpaII CCGG 1 cut(s) 390
HphI GGTGA 2 cut(s) 446, 961
Hpy166II GTNNAC 2 cut(s) 418, 586
Hpy188I TCNGA 4 cut(s) 321, 357, 631, 1125
Hpy188III TCNNGA 4 cut(s) 13, 466, 1197, 1245
Hpy8I GTNNAC 2 cut(s) 418, 586
Hpy99I CGWCG 1 cut(s) 1242
HpyAV CCTTC 6 cut(s) 31, 56, 190, 830, 988, 1031
HpyCH4III ACNGT 3 cut(s) 383, 583, 1132
HpyCH4IV ACGT 3 cut(s) 735, 1050, 1113
HpyCH4V TGCA 8 cut(s) 494, 508, 518, 604, 856, 1021, 1054, 1233
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 1060, 1239
HpyF3I CTNAG 2 cut(s) 567, 628
HpySE526I ACGT 3 cut(s) 735, 1050, 1113
Hsp92I GRCGYC 1 cut(s) 1113
Hsp92II CATG 4 cut(s) 604, 856, 1078, 1211
HspAI GCGC 2 cut(s) 533, 679
KroI GCCGGC 1 cut(s) 389
KroNI GCCGGC 1 cut(s) 391
Kzo9I GATC 5 cut(s) 430, 640, 873, 958, 1101
LguI GCTCTTC 1 cut(s) 107
LmnI GCTCC 5 cut(s) 40, 48, 124, 652, 792
Lsp1109I GCAGC 5 cut(s) 30, 118, 688, 898, 1194
LweI GCATC 4 cut(s) 503, 520, 527, 1242
MaeI CTAG 1 cut(s) 710
MaeII ACGT 3 cut(s) 735, 1050, 1113
MaeIII GTNAC 4 cut(s) 199, 555, 740, 940
MalI GATC 5 cut(s) 432, 642, 875, 960, 1103
MboI GATC 5 cut(s) 430, 640, 873, 958, 1101
MboII GAAGA 9 cut(s) 124, 178, 259, 308, 443, 958, 1037, 1138, 1212
MfeI CAATTG 1 cut(s) 759
MflI RGATCY 1 cut(s) 1101
MhlI GDGCHC 4 cut(s) 12, 129, 528, 789
MluCI AATT 7 cut(s) 324, 347, 443, 667, 759, 822, 1044
MlyI GAGTC 4 cut(s) 418, 563, 719, 948
MmeI TCCRAC 1 cut(s) 125
MroNI GCCGGC 1 cut(s) 389
MroXI GAANNNNTTC 1 cut(s) 116
MseI TTAA 4 cut(s) 252, 375, 705, 1218
MslI CAYNNNNRTG 3 cut(s) 399, 459, 599
MspA1I CMGCKG 1 cut(s) 109
MspI CCGG 1 cut(s) 390
MspR9I CCNGG 2 cut(s) 98, 499
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 2 cut(s) 98, 499
MwoI GCNNNNNNNGC 3 cut(s) 532, 1060, 1239
NaeI GCCGGC 1 cut(s) 391
NdeII GATC 5 cut(s) 430, 640, 873, 958, 1101
NgoMIV GCCGGC 1 cut(s) 389
NlaIII CATG 4 cut(s) 604, 856, 1078, 1211
NlaIV GGNNCC 2 cut(s) 609, 951
NmuCI GTSAC 3 cut(s) 555, 740, 940
NspI RCATGY 3 cut(s) 604, 856, 1211
OliI CACNNNNGTG 1 cut(s) 459
PaeI GCATGC 2 cut(s) 604, 856
PciSI GCTCTTC 1 cut(s) 107
PdiI GCCGGC 1 cut(s) 391
PdmI GAANNNNTTC 1 cut(s) 116
PfeI GAWTC 3 cut(s) 16, 352, 404
PfoI TCCNGGA 1 cut(s) 497
PkrI GCNGC 6 cut(s) 45, 108, 678, 802, 913, 1184
PleI GAGTC 4 cut(s) 417, 562, 719, 947
PmaCI CACGTG 1 cut(s) 1051
PmlI CACGTG 1 cut(s) 1051
PpsI GAGTC 4 cut(s) 417, 562, 719, 947
Ppu21I YACGTR 2 cut(s) 736, 1051
PsiI TTATAA 1 cut(s) 1252
Psp124BI GAGCTC 2 cut(s) 129, 789
Psp6I CCWGG 2 cut(s) 96, 497
PspCI CACGTG 1 cut(s) 1051
PspGI CCWGG 2 cut(s) 96, 497
PspN4I GGNNCC 2 cut(s) 609, 951
PspPI GGNCC 3 cut(s) 290, 607, 949
PsuI RGATCY 1 cut(s) 1101
PvuII CAGCTG 1 cut(s) 109
RsaI GTAC 2 cut(s) 572, 992
RsaNI GTAC 2 cut(s) 571, 991
RseI CAYNNNNRTG 3 cut(s) 399, 459, 599
SacI GAGCTC 2 cut(s) 129, 789
SapI GCTCTTC 1 cut(s) 107
SaqAI TTAA 4 cut(s) 252, 375, 705, 1218
SatI GCNGC 6 cut(s) 44, 107, 677, 801, 912, 1183
Sau3AI GATC 5 cut(s) 430, 640, 873, 958, 1101
Sau96I GGNCC 3 cut(s) 290, 607, 949
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 4 cut(s) 418, 563, 719, 948
ScrFI CCNGG 2 cut(s) 98, 499
SduI GDGCHC 4 cut(s) 12, 129, 528, 789
SfaNI GCATC 4 cut(s) 503, 520, 527, 1242
SfcI CTRYAG 2 cut(s) 207, 745
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 3 cut(s) 399, 459, 599
SmlI CTYRAG 1 cut(s) 1243
SmoI CTYRAG 1 cut(s) 1243
SpeI ACTAGT 1 cut(s) 709
SphI GCATGC 2 cut(s) 604, 856
Sse9I AATT 7 cut(s) 324, 347, 443, 667, 759, 822, 1044
SsiI CCGC 5 cut(s) 46, 800, 803, 914, 1061
SspMI CTAG 1 cut(s) 710
SstI GAGCTC 2 cut(s) 129, 789
StyD4I CCNGG 2 cut(s) 96, 497
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 3 cut(s) 383, 583, 1132
TaiI ACGT 3 cut(s) 738, 1053, 1116
TaqI TCGA 4 cut(s) 92, 407, 528, 934
TasI AATT 7 cut(s) 324, 347, 443, 667, 759, 822, 1044
TatI WGTACW 1 cut(s) 570
TauI GCSGC 1 cut(s) 803
TfiI GAWTC 3 cut(s) 16, 352, 404
Tru1I TTAA 4 cut(s) 252, 375, 705, 1218
Tru9I TTAA 4 cut(s) 252, 375, 705, 1218
TscAI CASTG 3 cut(s) 26, 270, 420
TseFI GTSAC 3 cut(s) 555, 740, 940
TseI GCWGC 5 cut(s) 43, 106, 676, 911, 1182
Tsp45I GTSAC 3 cut(s) 555, 740, 940
TspDTI ATGAA 3 cut(s) 243, 900, 1091
TspGWI ACGGA 1 cut(s) 1226
TspRI CASTG 3 cut(s) 26, 270, 420
VpaK11BI GGWCC 1 cut(s) 290
XagI CCTNNNNNAGG 1 cut(s) 735
XapI RAATTY 1 cut(s) 443
XceI RCATGY 3 cut(s) 604, 856, 1211
XcmI CCANNNNNNNNNTGG 1 cut(s) 1091
XmiI GTMKAC 1 cut(s) 585
XmnI GAANNNNTTC 1 cut(s) 116
XspI CTAG 1 cut(s) 710
ZraI GACGTC 1 cut(s) 1114
ZrmI AGTACT 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.