Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008758

Physical Location & Seq

Genomic Coordinates Reverse (-)

19092858 .. 19098772

Gene Structure 5915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G47040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGGCGGAAACAGTGGAGCTCCCGAGTAGGTTAGCGATTCTTCCTTTCAGGAATAAGGTTCTCTTACCTGGCGCCATTATTCGAATCCGTTGTACTTCTCATAGCAGCGTCACACTAGTGGAGCAAGAGCTATGGCAGAAAGAAGAGAAAGGTTTAATTGGCATTTTACCTGTTCGTGATGATGCCGAGGGTTCTTCAATTGGGACGATGATTAATCCAGGTGCTGGAAGTGATTCTGGAGAAAGAAGCTTGAAATTTCTAGTTGGTACAACAGATGCTCAGAAGTCTGATGCTAAAGATCAGCAGGATCTTCAATGGCACACCAGGGGAGTAGCAGCTCGTGCTCTGCATCTTTCAAGAGGGGTGGAAAAACCAAGTGGAAGAGTTACGTATGTGGTTGTCCTTGAAGGTCTGAGCAGGTTTAATGTTCAGGAGCTTGGAAAGAGAGGACCATATTCGGTTGCTCGGATTACATCGCTCGAGATGACAAAGGCAGAGTTGGAGCAAGTAAAACAAGATCCAGATTTTGTAGCACTGTCACGCCAGTTTAAAACCACAGCTATGGAGCTTGTCTCTGTGCTTGAGCAGAAACAAAAAACTGGTGGAAGGACAAAAGTGCTTTTGGAGACAGTTCCTATCCATAAACTAGCAGACATATTTGTTGCTAGCTTTGAGATGAGTTTTGAAGAGCAACTATCTATGCTGGATTCAGTTGACCTTAAAGTAAGACTTTCAAAGGCTACTGAACTAGTTGATCGGCATCTGCAGTCAATTCGCGTGGCAGAGAAGATTACGCAGAAGGTGGAGGGCCAGTTGTCAAAGTCTCAGAAGGAGTATCTCTTGCGCCAGCAGATGAGAGCTATTAAAGAGGAGCTTGGTGACAACGATGATGATGAAGATGATGTAGCTGCACTTGAAAGAAAGATGCAAGCTGCGGGAATGCCGTCAAACATATGGAAGCATGCTCAAAGGGAATTGAGGCGTCTAAAAAAGATGCAACCTCAGCAACCTGGCTATAACAGTTCACGAGTTTACCTGGAGCTGTTGGCTGATCTTCCTTGGGATAAGGCAAGCGAAGAACATGAGTTGGATCTAAAAGCAGCAAAAGAACGTCTTGACAGTGATCACTATGGTTTAGCCAAGGTCAAGCAACGGATCATTGAATATCTGGCTGTTCGAAAGCTTAAACCAGATGCGAGAGGCCCAGTATTGTGCTTTGTTGGTCCACCAGGTGTGGGCAAGACGTCTTTGGCATCATCTATTGCAGCTGCATTAGGTAGAAAATTTGTTCGCTTATCTTTGGGTGGTGTGAAAGATGAAGCTGACATTAGAGGACACAGAAGAACTTATATAGGAAGCATGCCAGGGCGCCTCATTGATGGCCTAAAGAGGGTTGGTGTTTGCAATCCAGTTATGCTGTTGGATGAGATTGACAAAACAGGCTCAGACGTTCGGGGTGATCCAGCTTCTGCACTGCTCGAGGTTTTGGATCCAGAGCAGAACAAATCTTTTAATGATCACTATCTGAATGTTCCATATGACTTATCAAAGGTGGTTTTTGTTGCCACTGCTAATAGGGTTCAACCTATTCCACCTCCTCTTCTAGACAGGATGGAGCTAATTGAGTTGCCTGGTTATACGCAAGAGGAAAAACTTAAGATAGCTATGCGCCATCTGATTCCTCGAGTTCTAGATCAGCATGGGCTTAGTTCCGAGTTCCTCAAGATTCCAGAGGCTATGGTAAAGAATATAATTCAGAGGTATACAAGGGAAGCCGGTGTTCGTAGTCTAGAGAGGAACTTGGCTGCTTTAGCTCGTGCAGCTGCTGTGATGGTGGCAGAGCATGAACAAAGTCTTCCGTTGAGCAAAGATGTGCAGAAACTTACATCTCCTCTGCTTAATGGTAGAATGGCCGAAGGAGGCGAAGTGGAAATGGAAGTTATTCCAATGGGTGTAAATGATCATGAGATTGGAGGCACCTTCCAGAGTCCCTCAGCTTTGGTGGTGGATGAGACCATGCTTGAAAAAATCCTCGGGCCTCCAAGGTTTGATGACAGTGAAGCCGCTGATCGAGTGGCGTCAGCTGGCGTTTCAGTGGGTCTCGTTTGGACTACTTTTGGTGGTGAAGTCCAGTTCGTGGAGGCTACATCTATGGTGGGCAAAGGCGAAATGCATTTGACGGGCCAACTCGGAGATGTTATCAAAGAATCTGCTCAATTAGCTCTTACATGGGTAAGAGCTCGTGCGTCGGATTTTAAGCTGGCACTTGCAGGGGATATGAATGTTCTTGATGGACGAGACATCCACATTCACTTTCCTGCTGGTGCAGTGCCGAAAGACGGGCCTTCTGCGGGAGTGACTTTGGTGACAGCTTTGGTTTCGTTGTTCAGTCAGAAACGAGTTAGAGCAGACACAGCCATGACCGGAGAGATGACACTCAGAGGTCTCGTTCTGCCTGTTGGTGGCATCAAAGATAAGATATTGGCTGCACACCGGTATGGTATCAAAAGAGTGATTCTACCGCAAAGGAACTCGAAAGACTTAGTTGAAGTACCCGCCGCTGTACTTTCCAGTCTGGAGGTGATATTGGCAAAGAGAATGGAAGACGTCCTGGAAAATGCATTCGAAGGAGGTTGTCCATGGCGGAACAACTACTCTAAATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005782 GO:0006139 GO:0006259 GO:0006508 GO:0006605 GO:0006625 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006996 GO:0007005 GO:0007031 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009791 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015919 GO:0016043 GO:0016485 GO:0016558 GO:0016560 GO:0017038 GO:0019538 GO:0022622 GO:0031907 GO:0031974 GO:0032042 GO:0032501 GO:0032502 GO:0033036 GO:0033365 GO:0034613 GO:0034641 GO:0040007 GO:0042579 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043574 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046483 GO:0046907 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070013 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0090304 GO:0090696 GO:0099402 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA LON_substr_bdg Lon_C

Protein Analysis

888

Amino Acids

97.86

Weight (kDa)

6.85

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LON_substr_bdg	PF02190	11 - 253	1.1e-28	ATP-dependent protease La (LON) substrate-binding domain
AAA	PF00004	404 - 541	3.2e-24	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	404 - 538	6.7e-08	AAA domain (dynein-related subfamily)
Lon_lid	PF22667	566 - 617	2.6e-17	Lon protease AAA+ ATPase lid domain
Lon_C	PF05362	669 - 875	1.3e-76	Lon protease (S16) C-terminal proteolytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008758)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47040
fragaria_vesca	FvH4_5g20910 FvH4_5g20910
malus_domestica	MD06G1043200.v1.1 MD16G1267600.v1.1
prunus_persica	Prupe.5G050100_v2.0.a1 Prupe.5G050100_v2.0.a1
pyrus_communis	pycom06g03620 pycom16g23700 pycom16g23710
rosa_chinensis	RchiOBHm_Chr7g0207901
rosa_laevigata	RLG00000003277
rosa_multiflora	Rmu_co8377115.1_g000001 Rmu_sc0006577.1_g000003
rosa_roxburghii	Rroxscaffold_3G00251060
rosa_rugosa	Rorug07G0100200 Rorug07G0100200
rosa_samantha	Rh7AG233500 Rh7BG229100 Rh7CG248800 Rh7DG239500
rosa_wichuraiana	Rw0G001300 Rw7G020040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1247, 2610
Acc36I	ACCTGC	1 cut(s)	408
AccB1I	GGYRCC	3 cut(s)	71, 1368, 1976
AccB7I	CCANNNNNTGG	2 cut(s)	224, 2137
AccI	GTMKAC	1 cut(s)	1763
AccII	CGCG	1 cut(s)	777
AciI	CCGC	8 cut(s)	5, 935, 2064, 2351, 2522, 2556, 2559, 2644
AclWI	GGATC	7 cut(s)	315, 512, 1098, 1163, 1454, 1484, 1497
AcoI	YGGCCR	1 cut(s)	1911
AcsI	RAATTY	2 cut(s)	254, 1283
AcyI	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
AdeI	CACNNNGTG	1 cut(s)	1232
AfaI	GTAC	4 cut(s)	94, 268, 2553, 2565
AfiI	CCNNNNNNNGG	7 cut(s)	224, 1235, 1390, 2137, 2339, 2351, 2462
AflII	CTTAAG	1 cut(s)	1655
AgeI	ACCGGT	1 cut(s)	2493
AhlI	ACTAGT	2 cut(s)	115, 748
AjnI	CCWGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
AleI	CACNNNNGTG	1 cut(s)	116
Alw21I	GWGCWC	3 cut(s)	21, 346, 2242
Alw26I	GTCTC	7 cut(s)	577, 620, 828, 2006, 2105, 2292, 2450
AlwI	GGATC	7 cut(s)	315, 512, 1098, 1163, 1454, 1484, 1497
AlwNI	CAGNNNCTG	3 cut(s)	224, 1469, 1826
Ama87I	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
AoxI	GGCC	7 cut(s)	808, 1201, 1381, 1911, 2036, 2182, 2342
ApoI	RAATTY	2 cut(s)	254, 1283
AseI	ATTAAT	1 cut(s)	213
AsiGI	ACCGGT	1 cut(s)	2493
Asp700I	GAANNNNTTC	2 cut(s)	232, 1941
AspLEI	GCGC	4 cut(s)	74, 846, 1371, 1671
AspS9I	GGNCC	7 cut(s)	449, 808, 1202, 1223, 2036, 2182, 2342
AsuHPI	GGTGA	5 cut(s)	890, 1469, 2135, 2377, 2593
AsuII	TTCGAA	3 cut(s)	82, 1177, 2625
AsuNHI	GCTAGC	1 cut(s)	665
AvaI	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
AvaII	GGWCC	2 cut(s)	449, 1223
BamHI	GGATCC	1 cut(s)	1489
BanI	GGYRCC	3 cut(s)	71, 1368, 1976
BanII	GRGCYC	2 cut(s)	21, 2242
BauI	CACGAG	4 cut(s)	339, 1026, 1815, 2241
BbsI	GAAGAC	2 cut(s)	1847, 2610
Bbv12I	GWGCWC	3 cut(s)	21, 346, 2242
BbvCI	CCTCAGC	2 cut(s)	1002, 1993
BccI	CCATC	5 cut(s)	1373, 1606, 1680, 1825, 2285
BceAI	ACGGC	1 cut(s)	928
BcgI	CGANNNNNNTGC	2 cut(s)	755, 789
BciT130I	CCWGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
BclI	TGATCA	3 cut(s)	1123, 1516, 1960
BcoDI	GTCTC	7 cut(s)	577, 620, 828, 2006, 2105, 2292, 2450
BcuI	ACTAGT	2 cut(s)	115, 748
BfaI	CTAG	8 cut(s)	116, 260, 647, 666, 749, 1604, 1691, 1790
BfmI	CTRYAG	1 cut(s)	764
BfoI	RGCGCY	2 cut(s)	75, 1372
BfrI	CTTAAG	1 cut(s)	1655
BfuAI	ACCTGC	1 cut(s)	408
Bme1390I	CCNGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
Bme18I	GGWCC	2 cut(s)	449, 1223
BmeT110I	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
BmgT120I	GGNCC	7 cut(s)	449, 808, 1202, 1223, 2036, 2182, 2342
BmiI	GGNNCC	4 cut(s)	73, 1370, 1491, 1978
BmrFI	CCNGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
BmrI	ACTGGG	1 cut(s)	1199
BmtI	GCTAGC	1 cut(s)	669
BmuI	ACTGGG	1 cut(s)	1199
BpiI	GAAGAC	2 cut(s)	1847, 2610
BplI	GAGNNNNNCTC	2 cut(s)	557, 589
BpmI	CTGGAG	3 cut(s)	258, 1058, 2597
Bpu10I	CCTNAGC	2 cut(s)	1002, 1993
Bpu14I	TTCGAA	3 cut(s)	82, 1177, 2625
BpuEI	CTTGAG	2 cut(s)	602, 1706
BsaAI	YACGTR	1 cut(s)	390
BsaBI	GATNNNNATC	2 cut(s)	759, 1521
BsaHI	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
BsaI	GGTCTC	3 cut(s)	2006, 2105, 2450
BsaJI	CCNNGG	8 cut(s)	186, 324, 1058, 1140, 1364, 2032, 2042, 2639
BsaWI	WCCGGW	2 cut(s)	2423, 2493
BsaXI	ACNNNNNCTCC	4 cut(s)	797, 827, 1911, 1941
Bsc4I	CCNNNNNNNGG	7 cut(s)	224, 1235, 1390, 2137, 2339, 2351, 2462
Bse118I	RCCGGY	2 cut(s)	1775, 2493
Bse1I	ACTGG	7 cut(s)	544, 604, 811, 1205, 1409, 2131, 2571
Bse8I	GATNNNNATC	2 cut(s)	759, 1521
BseBI	CCWGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
BseDI	CCNNGG	8 cut(s)	186, 324, 1058, 1140, 1364, 2032, 2042, 2639
BseGI	GGATG	4 cut(s)	1429, 1617, 2014, 2301
BseJI	GATNNNNATC	2 cut(s)	759, 1521
BseLI	CCNNNNNNNGG	7 cut(s)	224, 1235, 1390, 2137, 2339, 2351, 2462
BseMII	CTCAG	7 cut(s)	293, 404, 839, 1016, 1458, 2007, 2452
BseNI	ACTGG	7 cut(s)	544, 604, 811, 1205, 1409, 2131, 2571
BseRI	GAGGAG	3 cut(s)	884, 1587, 1881
BsgI	GTGCAG	6 cut(s)	894, 1455, 1839, 1895, 2346, 2472
Bsh1236I	CGCG	1 cut(s)	777
BshFI	GGCC	7 cut(s)	810, 1203, 1383, 1913, 2038, 2184, 2344
BshNI	GGYRCC	3 cut(s)	71, 1368, 1976
BshTI	ACCGGT	1 cut(s)	2493
BsiHKAI	GWGCWC	3 cut(s)	21, 346, 2242
BsiHKCI	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
BsiSI	CCGG	3 cut(s)	1776, 2424, 2494
BslFI	GGGAC	2 cut(s)	217, 1974
BslI	CCNNNNNNNGG	7 cut(s)	224, 1235, 1390, 2137, 2339, 2351, 2462
BsmAI	GTCTC	7 cut(s)	577, 620, 828, 2006, 2105, 2292, 2450
BsmFI	GGGAC	2 cut(s)	217, 1974
BsmI	GAATGC	2 cut(s)	945, 2621
BsnI	GGCC	7 cut(s)	810, 1203, 1383, 1913, 2038, 2184, 2344
Bso31I	GGTCTC	3 cut(s)	2006, 2105, 2450
BsoBI	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
Bsp119I	TTCGAA	3 cut(s)	82, 1177, 2625
Bsp1286I	GDGCHC	3 cut(s)	21, 346, 2242
Bsp19I	CCATGG	1 cut(s)	2639
BspACI	CCGC	8 cut(s)	5, 935, 2064, 2351, 2522, 2556, 2559, 2644
BspANI	GGCC	7 cut(s)	810, 1203, 1383, 1913, 2038, 2184, 2344
BspCNI	CTCAG	7 cut(s)	292, 405, 838, 1015, 1457, 2006, 2451
BspFNI	CGCG	1 cut(s)	777
BspHI	TCATGA	1 cut(s)	1963
BspLI	GGNNCC	4 cut(s)	73, 1370, 1491, 1978
BspMAI	CTGCAG	1 cut(s)	768
BspMI	ACCTGC	1 cut(s)	408
BspOI	GCTAGC	1 cut(s)	669
BspPI	GGATC	7 cut(s)	315, 512, 1098, 1163, 1454, 1484, 1497
BspQI	GCTCTTC	1 cut(s)	681
BspT104I	TTCGAA	3 cut(s)	82, 1177, 2625
BspT107I	GGYRCC	3 cut(s)	71, 1368, 1976
BspTI	CTTAAG	1 cut(s)	1655
BspTNI	GGTCTC	3 cut(s)	2006, 2105, 2450
BsrFI	RCCGGY	2 cut(s)	1775, 2493
BsrI	ACTGG	7 cut(s)	544, 604, 811, 1205, 1409, 2131, 2571
BssAI	RCCGGY	2 cut(s)	1775, 2493
BssECI	CCNNGG	8 cut(s)	186, 324, 1058, 1140, 1364, 2032, 2042, 2639
BssNAI	GTATAC	1 cut(s)	1764
BssNI	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
BssSI	CACGAG	4 cut(s)	339, 1026, 1815, 2241
BssT1I	CCWWGG	4 cut(s)	1058, 1140, 2042, 2639
Bst1107I	GTATAC	1 cut(s)	1764
Bst2BI	CACGAG	4 cut(s)	339, 1026, 1815, 2241
Bst2UI	CCWGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
Bst4CI	ACNGT	6 cut(s)	13, 537, 631, 1022, 1121, 2057
Bst6I	CTCTTC	4 cut(s)	138, 376, 681, 1605
BstACI	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
BstAFI	CTTAAG	1 cut(s)	1655
BstAPI	GCANNNNNTGC	1 cut(s)	341
BstBAI	YACGTR	1 cut(s)	390
BstBI	TTCGAA	3 cut(s)	82, 1177, 2625
BstC8I	GCNNGC	8 cut(s)	667, 848, 930, 963, 1072, 1361, 2086, 2262
BstDEI	CTNAG	9 cut(s)	279, 413, 825, 1002, 1444, 1706, 1993, 2438, 2542
BstDSI	CCRYGG	1 cut(s)	2639
BstF5I	GGATG	4 cut(s)	1429, 1617, 2014, 2301
BstFNI	CGCG	1 cut(s)	777
BstH2I	RGCGCY	2 cut(s)	75, 1372
BstHHI	GCGC	4 cut(s)	74, 846, 1371, 1671
BstMAI	GTCTC	7 cut(s)	577, 620, 828, 2006, 2105, 2292, 2450
BstMWI	GCNNNNNNNGC	6 cut(s)	341, 1003, 1811, 1820, 2219, 2414
BstNI	CCWGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
BstNSI	RCATGY	2 cut(s)	965, 1363
BstSCI	CCNGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
BstSFI	CTRYAG	1 cut(s)	764
BstSNI	TACGTA	1 cut(s)	390
BstUI	CGCG	1 cut(s)	777
BstV2I	GAAGAC	2 cut(s)	1847, 2610
BstX2I	RGATCY	4 cut(s)	307, 517, 1090, 1489
BstXI	CCANNNNNNTGG	1 cut(s)	562
BstYI	RGATCY	4 cut(s)	307, 517, 1090, 1489
BstZ17I	GTATAC	1 cut(s)	1764
BsuRI	GGCC	7 cut(s)	810, 1203, 1383, 1913, 2038, 2184, 2344
BtgI	CCRYGG	1 cut(s)	2639
BtgZI	GCGATG	1 cut(s)	459
BtsCI	GGATG	4 cut(s)	1429, 1617, 2014, 2301
BtsI	GCAGTG	3 cut(s)	1472, 1566, 2334
BtsIMutI	CAGTG	8 cut(s)	18, 533, 1126, 1472, 1566, 2062, 2100, 2334
BveI	ACCTGC	1 cut(s)	408
Cac8I	GCNNGC	8 cut(s)	667, 848, 930, 963, 1072, 1361, 2086, 2262
CaiI	CAGNNNCTG	3 cut(s)	224, 1469, 1826
CciI	TCATGA	1 cut(s)	1963
CfoI	GCGC	4 cut(s)	74, 846, 1371, 1671
Cfr10I	RCCGGY	2 cut(s)	1775, 2493
Cfr13I	GGNCC	7 cut(s)	449, 808, 1202, 1223, 2036, 2182, 2342
CseI	GACGC	4 cut(s)	97, 971, 2067, 2235
CsiI	ACCWGGT	1 cut(s)	1228
Csp6I	GTAC	4 cut(s)	93, 267, 2552, 2564
CspAI	ACCGGT	1 cut(s)	2493
CspCI	CAANNNNNGTGG	4 cut(s)	345, 380, 759, 794
CviQI	GTAC	4 cut(s)	93, 267, 2552, 2564
DdeI	CTNAG	9 cut(s)	279, 413, 825, 1002, 1444, 1706, 1993, 2438, 2542
DinI	GGCGCC	2 cut(s)	73, 1370
DraI	TTTAAA	1 cut(s)	550
DraIII	CACNNNGTG	1 cut(s)	1232
EaeI	YGGCCR	1 cut(s)	1911
Eam1104I	CTCTTC	4 cut(s)	138, 376, 681, 1605
EarI	CTCTTC	4 cut(s)	138, 376, 681, 1605
EciI	GGCGGA	2 cut(s)	20, 2659
Ecl136II	GAGCTC	2 cut(s)	19, 2240
Eco105I	TACGTA	1 cut(s)	390
Eco130I	CCWWGG	4 cut(s)	1058, 1140, 2042, 2639
Eco24I	GRGCYC	2 cut(s)	21, 2242
Eco31I	GGTCTC	3 cut(s)	2006, 2105, 2450
Eco47I	GGWCC	2 cut(s)	449, 1223
Eco53kI	GAGCTC	2 cut(s)	19, 2240
Eco88I	CYCGRG	5 cut(s)	22, 479, 1478, 1683, 2033
EcoICRI	GAGCTC	2 cut(s)	19, 2240
EcoRII	CCWGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
EcoT14I	CCWWGG	4 cut(s)	1058, 1140, 2042, 2639
EcoT22I	ATGCAT	2 cut(s)	2175, 2623
EcoT38I	GRGCYC	2 cut(s)	21, 2242
EgeI	GGCGCC	2 cut(s)	73, 1370
EheI	GGCGCC	2 cut(s)	73, 1370
ErhI	CCWWGG	4 cut(s)	1058, 1140, 2042, 2639
FalI	AAGNNNNNCTT	8 cut(s)	47, 79, 714, 746, 858, 890, 1098, 1130
FaqI	GGGAC	2 cut(s)	217, 1974
FauI	CCCGC	3 cut(s)	928, 2344, 2563
FauNDI	CATATG	2 cut(s)	953, 1537
FbaI	TGATCA	3 cut(s)	1123, 1516, 1960
FblI	GTMKAC	1 cut(s)	1763
FokI	GGATG	4 cut(s)	1436, 1624, 2021, 2288
FriOI	GRGCYC	2 cut(s)	21, 2242
FspBI	CTAG	8 cut(s)	116, 260, 647, 666, 749, 1604, 1691, 1790
GlaI	GCGC	4 cut(s)	73, 845, 1370, 1670
GsuI	CTGGAG	3 cut(s)	258, 1058, 2597
HaeII	RGCGCY	2 cut(s)	75, 1372
HaeIII	GGCC	7 cut(s)	810, 1203, 1383, 1913, 2038, 2184, 2344
HapII	CCGG	3 cut(s)	1776, 2424, 2494
HgaI	GACGC	4 cut(s)	97, 971, 2067, 2235
HhaI	GCGC	4 cut(s)	74, 846, 1371, 1671
Hin1I	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
Hin6I	GCGC	4 cut(s)	72, 844, 1369, 1669
HinP1I	GCGC	4 cut(s)	72, 844, 1369, 1669
HincII	GTYRAC	1 cut(s)	715
HindII	GTYRAC	1 cut(s)	715
HindIII	AAGCTT	2 cut(s)	247, 1181
HinfI	GANTC	9 cut(s)	37, 84, 233, 707, 1678, 1726, 1987, 2207, 2515
HpaII	CCGG	3 cut(s)	1776, 2424, 2494
HphI	GGTGA	5 cut(s)	890, 1469, 2135, 2377, 2593
Hpy166II	GTNNAC	5 cut(s)	715, 1025, 1033, 1226, 1764
Hpy8I	GTNNAC	5 cut(s)	715, 1025, 1033, 1226, 1764
Hpy99I	CGWCG	1 cut(s)	2251
HpyAV	CCTTC	8 cut(s)	401, 600, 793, 823, 1910, 1990, 2355, 2621
HpyCH4III	ACNGT	6 cut(s)	13, 537, 631, 1022, 1121, 2057
HpyCH4IV	ACGT	5 cut(s)	389, 1111, 1244, 1449, 2607
HpyF10VI	GCNNNNNNNGC	6 cut(s)	341, 1003, 1811, 1820, 2219, 2414
HpyF3I	CTNAG	9 cut(s)	279, 413, 825, 1002, 1444, 1706, 1993, 2438, 2542
HpySE526I	ACGT	5 cut(s)	389, 1111, 1244, 1449, 2607
Hsp92I	GRCGYC	6 cut(s)	72, 982, 1244, 1369, 2078, 2607
HspAI	GCGC	4 cut(s)	72, 844, 1369, 1669
KasI	GGCGCC	2 cut(s)	71, 1368
Ksp22I	TGATCA	3 cut(s)	1123, 1516, 1960
LguI	GCTCTTC	1 cut(s)	681
LmnI	GCTCC	9 cut(s)	16, 24, 121, 433, 502, 565, 871, 1039, 1615
MabI	ACCWGGT	1 cut(s)	1228
MaeI	CTAG	8 cut(s)	116, 260, 647, 666, 749, 1604, 1691, 1790
MaeII	ACGT	5 cut(s)	389, 1111, 1244, 1449, 2607
MaeIII	GTNAC	6 cut(s)	109, 385, 537, 878, 2356, 2365
MfeI	CAATTG	1 cut(s)	198
MflI	RGATCY	4 cut(s)	307, 517, 1090, 1489
MhlI	GDGCHC	3 cut(s)	21, 346, 2242
Mly113I	GGCGCC	2 cut(s)	72, 1369
MlyI	GAGTC	1 cut(s)	1996
MmeI	TCCRAC	4 cut(s)	480, 1068, 1401, 2229
Mph1103I	ATGCAT	2 cut(s)	2175, 2623
MroXI	GAANNNNTTC	2 cut(s)	232, 1941
MslI	CAYNNNNRTG	4 cut(s)	116, 560, 2417, 2496
MspA1I	CMGCKG	5 cut(s)	1268, 1823, 2066, 2084, 2561
MspCI	CTTAAG	1 cut(s)	1655
MspI	CCGG	3 cut(s)	1776, 2424, 2494
MspR9I	CCNGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
MunI	CAATTG	1 cut(s)	198
Mva1269I	GAATGC	2 cut(s)	945, 2621
MvaI	CCWGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
MvnI	CGCG	1 cut(s)	777
MwoI	GCNNNNNNNGC	6 cut(s)	341, 1003, 1811, 1820, 2219, 2414
NarI	GGCGCC	2 cut(s)	72, 1369
NcoI	CCATGG	1 cut(s)	2639
NdeI	CATATG	2 cut(s)	953, 1537
NheI	GCTAGC	1 cut(s)	665
NlaIV	GGNNCC	4 cut(s)	73, 1370, 1491, 1978
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	5 cut(s)	109, 537, 878, 2356, 2365
NsiI	ATGCAT	2 cut(s)	2175, 2623
NspI	RCATGY	2 cut(s)	965, 1363
NspV	TTCGAA	3 cut(s)	82, 1177, 2625
OliI	CACNNNNGTG	1 cut(s)	116
PaeI	GCATGC	2 cut(s)	965, 1363
PaeR7I	CTCGAG	3 cut(s)	479, 1478, 1683
PagI	TCATGA	1 cut(s)	1963
PciSI	GCTCTTC	1 cut(s)	681
PctI	GAATGC	2 cut(s)	945, 2621
PdmI	GAANNNNTTC	2 cut(s)	232, 1941
PfeI	GAWTC	8 cut(s)	37, 84, 233, 707, 1678, 1726, 2207, 2515
PflMI	CCANNNNNTGG	2 cut(s)	224, 2137
PfoI	TCCNGGA	1 cut(s)	2610
PinAI	ACCGGT	1 cut(s)	2493
PleI	GAGTC	1 cut(s)	1995
PluTI	GGCGCC	2 cut(s)	75, 1372
PpsI	GAGTC	1 cut(s)	1995
Ppu21I	YACGTR	1 cut(s)	390
PshBI	ATTAAT	1 cut(s)	213
Psp124BI	GAGCTC	2 cut(s)	21, 2242
Psp6I	CCWGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
PspGI	CCWGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
PspN4I	GGNNCC	4 cut(s)	73, 1370, 1491, 1978
PspPI	GGNCC	7 cut(s)	449, 808, 1202, 1223, 2036, 2182, 2342
PspXI	VCTCGAGB	2 cut(s)	1478, 1683
PstI	CTGCAG	1 cut(s)	768
PstNI	CAGNNNCTG	3 cut(s)	224, 1469, 1826
PsuI	RGATCY	4 cut(s)	307, 517, 1090, 1489
PvuII	CAGCTG	3 cut(s)	1268, 1823, 2084
RsaI	GTAC	4 cut(s)	94, 268, 2553, 2565
RsaNI	GTAC	4 cut(s)	93, 267, 2552, 2564
RseI	CAYNNNNRTG	4 cut(s)	116, 560, 2417, 2496
SacI	GAGCTC	2 cut(s)	21, 2242
SapI	GCTCTTC	1 cut(s)	681
Sau96I	GGNCC	7 cut(s)	449, 808, 1202, 1223, 2036, 2182, 2342
SchI	GAGTC	1 cut(s)	1996
ScrFI	CCNGG	9 cut(s)	69, 219, 325, 1011, 1037, 1230, 1365, 1632, 2612
SduI	GDGCHC	3 cut(s)	21, 346, 2242
SexAI	ACCWGGT	1 cut(s)	1228
SfcI	CTRYAG	1 cut(s)	764
SfoI	GGCGCC	2 cut(s)	73, 1370
Sfr274I	CTCGAG	3 cut(s)	479, 1478, 1683
SfuI	TTCGAA	3 cut(s)	82, 1177, 2625
SinI	GGWCC	2 cut(s)	449, 1223
SlaI	CTCGAG	3 cut(s)	479, 1478, 1683
SmiMI	CAYNNNNRTG	4 cut(s)	116, 560, 2417, 2496
SmlI	CTYRAG	6 cut(s)	479, 581, 1478, 1655, 1683, 1721
SmoI	CTYRAG	6 cut(s)	479, 581, 1478, 1655, 1683, 1721
SnaBI	TACGTA	1 cut(s)	390
SpeI	ACTAGT	2 cut(s)	115, 748
SphI	GCATGC	2 cut(s)	965, 1363
SsiI	CCGC	8 cut(s)	5, 935, 2064, 2351, 2522, 2556, 2559, 2644
SspDI	GGCGCC	2 cut(s)	71, 1368
SspMI	CTAG	8 cut(s)	116, 260, 647, 666, 749, 1604, 1691, 1790
SstI	GAGCTC	2 cut(s)	21, 2242
StyD4I	CCNGG	9 cut(s)	67, 217, 323, 1009, 1035, 1228, 1363, 1630, 2610
StyI	CCWWGG	4 cut(s)	1058, 1140, 2042, 2639
TaaI	ACNGT	6 cut(s)	13, 537, 631, 1022, 1121, 2057
TaiI	ACGT	5 cut(s)	392, 1114, 1247, 1452, 2610
TaqI	TCGA	8 cut(s)	82, 480, 1177, 1479, 1684, 2071, 2534, 2625
TatI	WGTACW	2 cut(s)	92, 2563
TauI	GCSGC	2 cut(s)	2066, 2561
TfiI	GAWTC	8 cut(s)	37, 84, 233, 707, 1678, 1726, 2207, 2515
TscAI	CASTG	8 cut(s)	18, 540, 1126, 1479, 1573, 2062, 2100, 2334
TseFI	GTSAC	5 cut(s)	109, 537, 878, 2356, 2365
Tsp45I	GTSAC	5 cut(s)	109, 537, 878, 2356, 2365
TspDTI	ATGAA	4 cut(s)	909, 1332, 1860, 2294
TspGWI	ACGGA	3 cut(s)	77, 1168, 1848
TspRI	CASTG	8 cut(s)	18, 540, 1126, 1479, 1573, 2062, 2100, 2334
Van91I	CCANNNNNTGG	2 cut(s)	224, 2137
Vha464I	CTTAAG	1 cut(s)	1655
VpaK11BI	GGWCC	2 cut(s)	449, 1223
VspI	ATTAAT	1 cut(s)	213
XapI	RAATTY	2 cut(s)	254, 1283
XbaI	TCTAGA	3 cut(s)	1603, 1690, 1789
XceI	RCATGY	2 cut(s)	965, 1363
XhoI	CTCGAG	3 cut(s)	479, 1478, 1683
XmiI	GTMKAC	1 cut(s)	1763
XmnI	GAANNNNTTC	2 cut(s)	232, 1941
XspI	CTAG	8 cut(s)	116, 260, 647, 666, 749, 1604, 1691, 1790
ZraI	GACGTC	2 cut(s)	1245, 2608
Zsp2I	ATGCAT	2 cut(s)	2175, 2623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.