AT5G47400

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
19229162 .. 19232743
3582 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47400.1

Sequence Viewer

Length: 2589 bp
ATGCCACGTGGCACGTTCGCTTTCTTTTTCTTCCTCGTGTTGATTTTTTTTCTTCTCTTTTGTCCCTCTTTGGTTTTTCTTTTCCCCTTCACAAGGCGCGATTTGAGTCGCCTCGCATTTCAAACCCTTCTTCTCCGGCGTAAACCTTTGCTCTATCTCTCGATAAAAACCCTTGTTTCGTTTTCACCTTCGTATTTAGCGATGCTTCCACACTCCTACACCGTCGATTCGCTTTCGCAATCACAAGACCTAGCTTCAGCTATACTCTCAGCTTCCACGCCGTCGAGTATCTCCGCTGCTTGCTCTTCCGTCGAATCGTTTCTTCAGTCGCATACGCCTGATCAGTGTCGCCATTTCTTCTCTGTTACTTTTCCGAGTTTAATCTGTAAGATCTTCGGTTTCGGCGACACGACCGCGGCATCTCCGGCACAGTCTTCTTCGCTGCGACCGAACGGTTGGATCGATGTAATCTCGGCGGCCAACGATTTGGATTTAGCGGAGAGAGTATACAATCTCTTATCCCCTAGTGGAATACTCATGAGCTCAATCTTCGCTGTTGATAAATTAGCTCTTGTTAAGTATGTTTTCCCGACGGAACGTTTACCGGAGTATGCTAGATTCATGCTCTCCAGCGAGAAGGATCGAATTGCGTTATCGAATCTGTGCCCCTTTTTGAAAGGTAAAATTGAGGAGGATTCAGTTCGTGGTTCATTGTGTGAAGTTAGGCTAAATGTTTTTGAGTATTACATGTTTTGGCTCTCTTATTATCCAGTTTGTAGAGGAAACAATGAGATTTCAGCTGTGAATCTGAATCCTATCCAAAAGAGAAACAAGTTTAGGCTAGAGAATTGGACACTTATCAAAGGTTTTCCAGGGAGTAACAAGCGTGATTCTGATCAGAAATTGGAGTGTAATCTCTACATAAGGCTTCTTTACTCTTATTTGAAAGCATTTGTTCCTGTTTTCGACTTAAACGCTCACCAGCCTTATCGTAGTTCTCTTTTGCATTACGGAAATGGGTATGATGGGTCAGTGATGACAAGAGCTGAGTTCTTGGTGAATGTTTTCGTGCATTATTGGCTTGTTGAGAATGACTTCTCACCATTTCCTGTTGTTACGGCTAAATCTTTTGGTGTGGCTCCTCCTTTCCGTTCTGCTGTGGAGGAGATTCCACCTACTTGTGGGTTGGAAGAAGTAGTGAAGTTGCTTGTCAAGTATCTGAATTTGAGTTGGGTTACAAGTGGTGTTGGGAGTGAAAACTACATTGAGTATGGCGAGAGTCCACGGTGGAAGACACCGACTTCAGGATCGTCATCCCATGTCGCGAATTTGAGCCTCAGGCCGCTCACTTCCTGGAACACCCATTTACAGAGGCCGCTTTATCGTTATATATTGAGGAGTTTCTTGTTCTGTCCCATAGGAAGCTCAATTAAGAATGCATCTCAGGTGTTCTCCATCTGGGTTACGTACCTGGAACCATGGATGATCAGTTTGGATGATTTCTCAGTTTTTGAACCTGCTTTAAGTGGATCTGTAAAAGATATGAAAAAGGAAGATTCTTATGAATCACGCGTTTGTGGATACACGCCTTTGTGGCAGAGCTATGTGATATCCAATTATCTCTACTATAGTTCTCTGGTCATGCATTTTATTGGCTTTGCACACAAGTTCCTTCACACAGATCCAGAAATAATAACTCAGATGGCTCTTAAGGTGATGAGTACGTTGACATCGTCAAAAGAGCTTTTGGTTCTGATGAAGAATATTGATAAAGCCTTTCACTCTAAACAAACTGGACCAGGAAACTCAAAAGTGAACGAATTGTCTAGATTTTCTCCATCTATCCGTGAGCAGTTGAAGGATTGGGAAGATGGGTTGTGTGAGAGCAACGCTGATGGCTCATACTTGCATGAAAACTGGAACAAAGACTTGAAACTCTTTAGTGATGGTGAAGATGGCGGACAACAACTGCTTCAGCTATTCATACTGCGGGCAGAAGCCGAACTGCAAACTGTATCCGATAAAAACCTCACAGAGGCCCTTAAGTGTGTAGATTCACTAAAATCAGCGGTTTCCAACTTCTTTGGCGGGCATGTCGTAAAACCAATCGCTTTTTTCCTAGAGCCGGACCATCCTCAGAAAAACCGTGACGAGCTCTTCAAGCCACGTGGTGCTGGTAACCAAACAGCAGGCGGTGTGAAGTACAAAGGGGACTGGATGACCCGTCCGGTGTCAGAAGACGAGGTTGCATTGATGGCTAAACTGCTAATCAACATGTCTATTTGGCTCAATGAACGCCTCGGGCTGAACAAATCTGAGACGAGCAACGACAAGAAAGAGAATTCAGAGTCAGTATCATATGTAGATGTATCAGGGGAAGATGTGGGAAACGTTGCAGGACCTGGAGATGCTGCGAAGATGCTGTTGCGAGGGATGGTGATGGTATGTGGCACAGTGTTGCAGCTGATGAGAAGATTCGGGATTCGAGTCAATCTTCGGGTTATGGCTTCAAAAAAGTTTCTGATGCTTTTATTTCTCTATGTCCTGTTTCTTGTAGTCAAAAGGGTAGTCACAAGGATGATTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

862

Amino Acids

97.57

Weight (kDa)

8.52

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1525
AccBSI CCGCTC 1 cut(s) 1345
AccI GTMKAC 1 cut(s) 507
AccII CGCG 4 cut(s) 99, 416, 1325, 1572
AclI AACGTT 2 cut(s) 598, 2391
AclWI GGATC 5 cut(s) 467, 648, 1315, 1537, 1676
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 3 cut(s) 1222, 1327, 2341
AcuI CTGAAG 4 cut(s) 240, 308, 1287, 1958
AcvI CACGTG 2 cut(s) 8, 2168
AdeI CACNNNGTG 1 cut(s) 2171
AfaI GTAC 3 cut(s) 1469, 1723, 2204
AfiI CCNNNNNNNGG 5 cut(s) 93, 1181, 1304, 2035, 2125
AflII CTTAAG 2 cut(s) 1709, 2042
AflIII ACRYGT 3 cut(s) 747, 1570, 2274
AgsI TTSAA 8 cut(s) 122, 676, 946, 1514, 1858, 1933, 2161, 2511
AjnI CCWGG 5 cut(s) 871, 1352, 1470, 1798, 2401
Alw21I GWGCWC 2 cut(s) 545, 2157
Alw26I GTCTC 1 cut(s) 2312
AlwI GGATC 5 cut(s) 467, 648, 1315, 1537, 1676
AlwNI CAGNNNCTG 1 cut(s) 2402
Ama87I CYCGRG 1 cut(s) 2300
AoxI GGCC 4 cut(s) 477, 1340, 1373, 2037
ApeKI GCWGC 4 cut(s) 296, 442, 2411, 2461
ApoI RAATTY 3 cut(s) 1222, 1327, 2341
ArsI GACNNNNNNTTYG 2 cut(s) 2553, 2585
Asp700I GAANNNNTTC 3 cut(s) 318, 1064, 1094
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 4 cut(s) 1796, 2038, 2128, 2399
AsuHPI GGTGA 7 cut(s) 177, 971, 1069, 1092, 1726, 1961, 2449
AvaI CYCGRG 1 cut(s) 2300
AvaII GGWCC 3 cut(s) 1796, 2128, 2399
AxyI CCTNAGG 1 cut(s) 1337
BaeGI GKGCMC 1 cut(s) 668
BanII GRGCYC 2 cut(s) 545, 2157
BauI CACGAG 1 cut(s) 35
BbrPI CACGTG 2 cut(s) 8, 2168
BbsI GAAGAC 3 cut(s) 426, 1298, 2244
Bbv12I GWGCWC 2 cut(s) 545, 2157
BbvI GCAGC 4 cut(s) 283, 429, 2398, 2473
BceAI ACGGC 2 cut(s) 265, 1134
BciT130I CCWGG 5 cut(s) 873, 1354, 1472, 1800, 2403
BciVI GTATCC 2 cut(s) 1574, 2026
BclI TGATCA 3 cut(s) 340, 895, 1485
BcoDI GTCTC 1 cut(s) 2312
BfaI CTAG 6 cut(s) 251, 525, 615, 842, 1827, 2120
BfmI CTRYAG 1 cut(s) 1627
BfrI CTTAAG 2 cut(s) 1709, 2042
BfuAI ACCTGC 1 cut(s) 1525
BfuI GTATCC 2 cut(s) 1574, 2026
BglI GCCNNNNNGGC 1 cut(s) 1594
BglII AGATCT 1 cut(s) 390
BisI GCNGC 8 cut(s) 297, 417, 443, 477, 1343, 1376, 2412, 2462
BlsI GCNGC 8 cut(s) 298, 418, 444, 478, 1344, 1377, 2413, 2463
Bme1390I CCNGG 5 cut(s) 873, 1354, 1472, 1800, 2403
Bme18I GGWCC 3 cut(s) 1796, 2128, 2399
BmeT110I CYCGRG 1 cut(s) 2300
BmgT120I GGNCC 4 cut(s) 1796, 2038, 2128, 2399
BmiI GGNNCC 2 cut(s) 1140, 1476
BmrFI CCNGG 5 cut(s) 873, 1354, 1472, 1800, 2403
BmsI GCATC 6 cut(s) 192, 428, 1448, 2398, 2409, 2514
BpiI GAAGAC 3 cut(s) 426, 1298, 2244
BpmI CTGGAG 2 cut(s) 613, 2424
Bsa29I ATCGAT 1 cut(s) 462
BsaAI YACGTR 3 cut(s) 8, 1467, 2168
BsaBI GATNNNNATC 2 cut(s) 894, 1312
BsaJI CCNNGG 5 cut(s) 414, 872, 1283, 1478, 2299
BsaWI WCCGGW 2 cut(s) 604, 2227
Bsc4I CCNNNNNNNGG 5 cut(s) 93, 1181, 1304, 2035, 2125
Bse1I ACTGG 4 cut(s) 770, 1798, 1922, 2219
Bse21I CCTNAGG 1 cut(s) 1337
Bse8I GATNNNNATC 2 cut(s) 894, 1312
BseBI CCWGG 5 cut(s) 873, 1354, 1472, 1800, 2403
BseCI ATCGAT 1 cut(s) 462
BseDI CCNNGG 5 cut(s) 414, 872, 1283, 1478, 2299
BseGI GGATG 7 cut(s) 1313, 1488, 1501, 2131, 2223, 2439, 2583
BseJI GATNNNNATC 2 cut(s) 894, 1312
BseLI CCNNNNNNNGG 5 cut(s) 93, 1181, 1304, 2035, 2125
BseMII CTCAG 8 cut(s) 282, 1038, 1351, 1457, 1518, 1712, 2150, 2307
BseNI ACTGG 4 cut(s) 770, 1798, 1922, 2219
BseRI GAGGAG 4 cut(s) 704, 1131, 1178, 1411
BseSI GKGCMC 1 cut(s) 668
BseXI GCAGC 4 cut(s) 283, 429, 2398, 2473
Bsh1236I CGCG 4 cut(s) 99, 416, 1325, 1572
Bsh1285I CGRYCG 2 cut(s) 414, 449
BshFI GGCC 4 cut(s) 479, 1342, 1375, 2039
BshVI ATCGAT 1 cut(s) 462
BsiEI CGRYCG 2 cut(s) 414, 449
BsiHKAI GWGCWC 2 cut(s) 545, 2157
BsiHKCI CYCGRG 1 cut(s) 2300
BsiSI CCGG 5 cut(s) 136, 425, 605, 2126, 2228
BslFI GGGAC 3 cut(s) 48, 1398, 2225
BslI CCNNNNNNNGG 5 cut(s) 93, 1181, 1304, 2035, 2125
BsmAI GTCTC 1 cut(s) 2312
BsmBI CGTCTC 1 cut(s) 2312
BsmFI GGGAC 3 cut(s) 48, 1398, 2225
BsmI GAATGC 1 cut(s) 1441
BsnI GGCC 4 cut(s) 479, 1342, 1375, 2039
BsoBI CYCGRG 1 cut(s) 2300
Bsp1286I GDGCHC 3 cut(s) 545, 668, 2157
Bsp143I GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
Bsp19I CCATGG 1 cut(s) 1478
Bsp68I TCGCGA 1 cut(s) 1325
BspANI GGCC 4 cut(s) 479, 1342, 1375, 2039
BspCNI CTCAG 8 cut(s) 281, 1039, 1350, 1456, 1517, 1711, 2149, 2308
BspDI ATCGAT 1 cut(s) 462
BspFNI CGCG 4 cut(s) 99, 416, 1325, 1572
BspHI TCATGA 1 cut(s) 537
BspLI GGNNCC 2 cut(s) 1140, 1476
BspMI ACCTGC 1 cut(s) 1525
BspPI GGATC 5 cut(s) 467, 648, 1315, 1537, 1676
BspQI GCTCTTC 2 cut(s) 310, 2162
BspTI CTTAAG 2 cut(s) 1709, 2042
BsrBI CCGCTC 1 cut(s) 1345
BsrI ACTGG 4 cut(s) 770, 1798, 1922, 2219
BssECI CCNNGG 5 cut(s) 414, 872, 1283, 1478, 2299
BssMI GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
BssNAI GTATAC 1 cut(s) 508
BssSI CACGAG 1 cut(s) 35
BssT1I CCWWGG 1 cut(s) 1478
Bst1107I GTATAC 1 cut(s) 508
Bst2BI CACGAG 1 cut(s) 35
Bst2UI CCWGG 5 cut(s) 873, 1354, 1472, 1800, 2403
Bst4CI ACNGT 7 cut(s) 223, 432, 455, 1287, 2014, 2147, 2455
Bst6I CTCTTC 2 cut(s) 310, 2162
BstAFI CTTAAG 2 cut(s) 1709, 2042
BstBAI YACGTR 3 cut(s) 8, 1467, 2168
BstC8I GCNNGC 4 cut(s) 301, 1992, 2090, 2191
BstDEI CTNAG 8 cut(s) 268, 1047, 1337, 1443, 1504, 1698, 2136, 2316
BstDSI CCRYGG 3 cut(s) 414, 1283, 1478
BstEII GGTNACC 1 cut(s) 2177
BstENI CCTNNNNNAGG 2 cut(s) 91, 2033
BstF5I GGATG 7 cut(s) 1313, 1488, 1501, 2131, 2223, 2439, 2583
BstFNI CGCG 4 cut(s) 99, 416, 1325, 1572
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 9 cut(s) 343, 393, 462, 643, 898, 1310, 1488, 1532, 1684
BstMAI GTCTC 1 cut(s) 2312
BstMBI GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
BstMCI CGRYCG 2 cut(s) 414, 449
BstMWI GCNNNNNNNGC 5 cut(s) 425, 1078, 1594, 2161, 2255
BstNI CCWGG 5 cut(s) 873, 1354, 1472, 1800, 2403
BstNSI RCATGY 3 cut(s) 751, 2096, 2278
BstPI GGTNACC 1 cut(s) 2177
BstSCI CCNGG 5 cut(s) 871, 1352, 1470, 1798, 2401
BstSFI CTRYAG 1 cut(s) 1627
BstSLI GKGCMC 1 cut(s) 668
BstSNI TACGTA 1 cut(s) 1467
BstUI CGCG 4 cut(s) 99, 416, 1325, 1572
BstV1I GCAGC 4 cut(s) 283, 429, 2398, 2473
BstV2I GAAGAC 3 cut(s) 426, 1298, 2244
BstX2I RGATCY 3 cut(s) 390, 1529, 1681
BstXI CCANNNNNNTGG 1 cut(s) 487
BstYI RGATCY 3 cut(s) 390, 1529, 1681
BstZ17I GTATAC 1 cut(s) 508
Bsu15I ATCGAT 1 cut(s) 462
Bsu36I CCTNAGG 1 cut(s) 1337
BsuI GTATCC 2 cut(s) 1574, 2026
BsuRI GGCC 4 cut(s) 479, 1342, 1375, 2039
BsuTUI ATCGAT 1 cut(s) 462
BtgI CCRYGG 3 cut(s) 414, 1283, 1478
BtgZI GCGATG 1 cut(s) 215
BtsCI GGATG 7 cut(s) 1313, 1488, 1501, 2131, 2223, 2439, 2583
BtsIMutI CAGTG 3 cut(s) 350, 1038, 2460
BtuMI TCGCGA 1 cut(s) 1325
BveI ACCTGC 1 cut(s) 1525
Cac8I GCNNGC 4 cut(s) 301, 1992, 2090, 2191
CaiI CAGNNNCTG 1 cut(s) 2402
CciI TCATGA 1 cut(s) 537
CfoI GCGC 1 cut(s) 99
Cfr13I GGNCC 4 cut(s) 1796, 2038, 2128, 2399
Cfr42I CCGCGG 1 cut(s) 417
ClaI ATCGAT 1 cut(s) 462
Csp6I GTAC 3 cut(s) 1468, 1722, 2203
CspCI CAANNNNNGTGG 2 cut(s) 2149, 2184
CviAII CATG 9 cut(s) 538, 622, 748, 1319, 1479, 1642, 1910, 2093, 2275
CviQI GTAC 3 cut(s) 1468, 1722, 2203
DdeI CTNAG 8 cut(s) 268, 1047, 1337, 1443, 1504, 1698, 2136, 2316
DpnI GATC 9 cut(s) 342, 392, 461, 642, 897, 1309, 1487, 1531, 1683
DpnII GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
DraIII CACNNNGTG 1 cut(s) 2171
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 2 cut(s) 310, 2162
EarI CTCTTC 2 cut(s) 310, 2162
EciI GGCGGA 1 cut(s) 1974
Ecl136II GAGCTC 2 cut(s) 543, 2155
Eco105I TACGTA 1 cut(s) 1467
Eco130I CCWWGG 1 cut(s) 1478
Eco24I GRGCYC 2 cut(s) 545, 2157
Eco32I GATATC 1 cut(s) 1611
Eco47I GGWCC 3 cut(s) 1796, 2128, 2399
Eco53kI GAGCTC 2 cut(s) 543, 2155
Eco57I CTGAAG 4 cut(s) 240, 308, 1287, 1958
Eco72I CACGTG 2 cut(s) 8, 2168
Eco81I CCTNAGG 1 cut(s) 1337
Eco88I CYCGRG 1 cut(s) 2300
Eco91I GGTNACC 1 cut(s) 2177
EcoICRI GAGCTC 2 cut(s) 543, 2155
EcoNI CCTNNNNNAGG 2 cut(s) 91, 2033
EcoO109I RGGNCCY 2 cut(s) 2038, 2399
EcoO65I GGTNACC 1 cut(s) 2177
EcoRI GAATTC 1 cut(s) 2341
EcoRII CCWGG 5 cut(s) 871, 1352, 1470, 1798, 2401
EcoRV GATATC 1 cut(s) 1611
EcoT14I CCWWGG 1 cut(s) 1478
EcoT22I ATGCAT 2 cut(s) 1441, 1647
EcoT38I GRGCYC 2 cut(s) 545, 2157
ErhI CCWWGG 1 cut(s) 1478
Esp3I CGTCTC 1 cut(s) 2312
FaeI CATG 9 cut(s) 541, 625, 751, 1322, 1482, 1645, 1913, 2096, 2278
FaqI GGGAC 3 cut(s) 48, 1398, 2225
FatI CATG 9 cut(s) 537, 621, 747, 1318, 1478, 1641, 1909, 2092, 2274
FauI CCCGC 2 cut(s) 1983, 2081
FauNDI CATATG 1 cut(s) 2359
FbaI TGATCA 3 cut(s) 340, 895, 1485
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 8 cut(s) 297, 417, 443, 477, 1343, 1376, 2412, 2462
FokI GGATG 6 cut(s) 1300, 1495, 1508, 2118, 2230, 2446
FriOI GRGCYC 2 cut(s) 545, 2157
Fsp4HI GCNGC 8 cut(s) 297, 417, 443, 477, 1343, 1376, 2412, 2462
FspBI CTAG 6 cut(s) 251, 525, 615, 842, 1827, 2120
GlaI GCGC 1 cut(s) 98
GluI GCNGC 8 cut(s) 297, 417, 443, 477, 1343, 1376, 2412, 2462
GsuI CTGGAG 2 cut(s) 613, 2424
HaeIII GGCC 4 cut(s) 479, 1342, 1375, 2039
HapII CCGG 5 cut(s) 136, 425, 605, 2126, 2228
HhaI GCGC 1 cut(s) 99
Hin1II CATG 9 cut(s) 541, 625, 751, 1322, 1482, 1645, 1913, 2096, 2278
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 1728
HindII GTYRAC 1 cut(s) 1728
HpaII CCGG 5 cut(s) 136, 425, 605, 2126, 2228
HphI GGTGA 7 cut(s) 177, 971, 1069, 1092, 1726, 1961, 2449
Hpy166II GTNNAC 6 cut(s) 143, 508, 602, 1283, 1728, 1816
Hpy188III TCNNGA 8 cut(s) 160, 538, 589, 1305, 1324, 1685, 1827, 2479
Hpy8I GTNNAC 6 cut(s) 143, 508, 602, 1283, 1728, 1816
Hpy99I CGWCG 4 cut(s) 227, 286, 314, 595
HpyAV CCTTC 6 cut(s) 97, 137, 198, 631, 1682, 1852
HpyCH4III ACNGT 7 cut(s) 223, 432, 455, 1287, 2014, 2147, 2455
HpyCH4IV ACGT 7 cut(s) 7, 14, 598, 1466, 1724, 2167, 2391
HpyF10VI GCNNNNNNNGC 5 cut(s) 425, 1078, 1594, 2161, 2255
HpyF3I CTNAG 8 cut(s) 268, 1047, 1337, 1443, 1504, 1698, 2136, 2316
HpySE526I ACGT 7 cut(s) 7, 14, 598, 1466, 1724, 2167, 2391
Hsp92II CATG 9 cut(s) 541, 625, 751, 1322, 1482, 1645, 1913, 2096, 2278
HspAI GCGC 1 cut(s) 97
Ksp22I TGATCA 3 cut(s) 340, 895, 1485
KspI CCGCGG 1 cut(s) 417
Kzo9I GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
LguI GCTCTTC 2 cut(s) 310, 2162
LmnI GCTCC 1 cut(s) 1144
Lsp1109I GCAGC 4 cut(s) 283, 429, 2398, 2473
LweI GCATC 6 cut(s) 192, 428, 1448, 2398, 2409, 2514
MaeI CTAG 6 cut(s) 251, 525, 615, 842, 1827, 2120
MaeII ACGT 7 cut(s) 7, 14, 598, 1466, 1724, 2167, 2391
MaeIII GTNAC 8 cut(s) 364, 878, 1114, 1234, 1462, 2147, 2177, 2569
MalI GATC 9 cut(s) 342, 392, 461, 642, 897, 1309, 1487, 1531, 1683
MbiI CCGCTC 1 cut(s) 1345
MboI GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
MflI RGATCY 3 cut(s) 390, 1529, 1681
MhlI GDGCHC 3 cut(s) 545, 668, 2157
MluI ACGCGT 1 cut(s) 1570
MlyI GAGTC 4 cut(s) 115, 1288, 2357, 2496
MmeI TCCRAC 3 cut(s) 437, 1167, 2100
Mph1103I ATGCAT 2 cut(s) 1441, 1647
MroXI GAANNNNTTC 3 cut(s) 318, 1064, 1094
MseI TTAA 7 cut(s) 380, 576, 971, 1431, 1523, 1710, 2043
MslI CAYNNNNRTG 1 cut(s) 2576
MspA1I CMGCKG 5 cut(s) 296, 416, 800, 2069, 2464
MspCI CTTAAG 2 cut(s) 1709, 2042
MspI CCGG 5 cut(s) 136, 425, 605, 2126, 2228
MspR9I CCNGG 5 cut(s) 873, 1354, 1472, 1800, 2403
Mva1269I GAATGC 1 cut(s) 1441
MvaI CCWGG 5 cut(s) 873, 1354, 1472, 1800, 2403
MvnI CGCG 4 cut(s) 99, 416, 1325, 1572
MwoI GCNNNNNNNGC 5 cut(s) 425, 1078, 1594, 2161, 2255
NcoI CCATGG 1 cut(s) 1478
NdeI CATATG 1 cut(s) 2359
NdeII GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
NlaIII CATG 9 cut(s) 541, 625, 751, 1322, 1482, 1645, 1913, 2096, 2278
NlaIV GGNNCC 2 cut(s) 1140, 1476
NmeAIII GCCGAG 1 cut(s) 452
NmuCI GTSAC 2 cut(s) 2147, 2569
NruI TCGCGA 1 cut(s) 1325
NsiI ATGCAT 2 cut(s) 1441, 1647
NspI RCATGY 3 cut(s) 751, 2096, 2278
PagI TCATGA 1 cut(s) 537
PciI ACATGT 2 cut(s) 747, 2274
PciSI GCTCTTC 2 cut(s) 310, 2162
PcsI WCGNNNNNNNCGW 5 cut(s) 197, 402, 446, 459, 1730
PctI GAATGC 1 cut(s) 1441
PdmI GAANNNNTTC 3 cut(s) 318, 1064, 1094
PflFI GACNNNGTC 1 cut(s) 1732
PfoI TCCNGGA 1 cut(s) 1352
PkrI GCNGC 8 cut(s) 298, 418, 444, 478, 1344, 1377, 2413, 2463
PleI GAGTC 4 cut(s) 114, 1287, 2356, 2495
PmaCI CACGTG 2 cut(s) 8, 2168
PmlI CACGTG 2 cut(s) 8, 2168
PpsI GAGTC 4 cut(s) 114, 1287, 2356, 2495
Ppu21I YACGTR 3 cut(s) 8, 1467, 2168
PpuMI RGGWCCY 1 cut(s) 2399
PscI ACATGT 2 cut(s) 747, 2274
Psp124BI GAGCTC 2 cut(s) 545, 2157
Psp1406I AACGTT 2 cut(s) 598, 2391
Psp5II RGGWCCY 1 cut(s) 2399
Psp6I CCWGG 5 cut(s) 871, 1352, 1470, 1798, 2401
PspCI CACGTG 2 cut(s) 8, 2168
PspEI GGTNACC 1 cut(s) 2177
PspGI CCWGG 5 cut(s) 871, 1352, 1470, 1798, 2401
PspN4I GGNNCC 2 cut(s) 1140, 1476
PspPI GGNCC 4 cut(s) 1796, 2038, 2128, 2399
PspPPI RGGWCCY 1 cut(s) 2399
PstNI CAGNNNCTG 1 cut(s) 2402
PsuI RGATCY 3 cut(s) 390, 1529, 1681
PsyI GACNNNGTC 1 cut(s) 1732
PvuII CAGCTG 2 cut(s) 800, 2464
RruI TCGCGA 1 cut(s) 1325
RsaI GTAC 3 cut(s) 1469, 1723, 2204
RsaNI GTAC 3 cut(s) 1468, 1722, 2203
RseI CAYNNNNRTG 1 cut(s) 2576
SacI GAGCTC 2 cut(s) 545, 2157
SacII CCGCGG 1 cut(s) 417
SapI GCTCTTC 2 cut(s) 310, 2162
SaqAI TTAA 7 cut(s) 380, 576, 971, 1431, 1523, 1710, 2043
SatI GCNGC 8 cut(s) 297, 417, 443, 477, 1343, 1376, 2412, 2462
Sau3AI GATC 9 cut(s) 340, 390, 459, 640, 895, 1307, 1485, 1529, 1681
Sau96I GGNCC 4 cut(s) 1796, 2038, 2128, 2399
SchI GAGTC 4 cut(s) 115, 1288, 2357, 2496
ScrFI CCNGG 5 cut(s) 873, 1354, 1472, 1800, 2403
SduI GDGCHC 3 cut(s) 545, 668, 2157
SfaNI GCATC 6 cut(s) 192, 428, 1448, 2398, 2409, 2514
SfcI CTRYAG 1 cut(s) 1627
Sfr303I CCGCGG 1 cut(s) 417
SgrBI CCGCGG 1 cut(s) 417
SinI GGWCC 3 cut(s) 1796, 2128, 2399
SmiMI CAYNNNNRTG 1 cut(s) 2576
SmlI CTYRAG 2 cut(s) 1709, 2042
SmoI CTYRAG 2 cut(s) 1709, 2042
SnaBI TACGTA 1 cut(s) 1467
SspI AATATT 1 cut(s) 1765
SspMI CTAG 6 cut(s) 251, 525, 615, 842, 1827, 2120
SstI GAGCTC 2 cut(s) 545, 2157
StyD4I CCNGG 5 cut(s) 871, 1352, 1470, 1798, 2401
StyI CCWWGG 1 cut(s) 1478
TaaI ACNGT 7 cut(s) 223, 432, 455, 1287, 2014, 2147, 2455
TaiI ACGT 7 cut(s) 10, 17, 601, 1469, 1727, 2170, 2394
TaqI TCGA 9 cut(s) 161, 225, 284, 312, 462, 643, 656, 966, 2485
TaqII GACCGA 1 cut(s) 463
TatI WGTACW 1 cut(s) 2202
TauI GCSGC 4 cut(s) 419, 479, 1345, 1378
Tru1I TTAA 7 cut(s) 380, 576, 971, 1431, 1523, 1710, 2043
Tru9I TTAA 7 cut(s) 380, 576, 971, 1431, 1523, 1710, 2043
TscAI CASTG 3 cut(s) 350, 1038, 2460
TseFI GTSAC 2 cut(s) 2147, 2569
TseI GCWGC 4 cut(s) 296, 442, 2411, 2461
Tsp45I GTSAC 2 cut(s) 2147, 2569
TspDTI ATGAA 8 cut(s) 610, 699, 1559, 1578, 1772, 1926, 1972, 2307
TspGWI ACGGA 5 cut(s) 298, 608, 1026, 1139, 1835
TspRI CASTG 3 cut(s) 350, 1038, 2460
Tth111I GACNNNGTC 1 cut(s) 1732
Vha464I CTTAAG 2 cut(s) 1709, 2042
VpaK11BI GGWCC 3 cut(s) 1796, 2128, 2399
XagI CCTNNNNNAGG 2 cut(s) 91, 2033
XapI RAATTY 3 cut(s) 1222, 1327, 2341
XbaI TCTAGA 1 cut(s) 1826
XceI RCATGY 3 cut(s) 751, 2096, 2278
XmiI GTMKAC 1 cut(s) 507
XmnI GAANNNNTTC 3 cut(s) 318, 1064, 1094
XspI CTAG 6 cut(s) 251, 525, 615, 842, 1827, 2120
Zsp2I ATGCAT 2 cut(s) 1441, 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.