Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005128

Physical Location & Seq

Genomic Coordinates Reverse (-)

17513847 .. 17518157

Gene Structure 4311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG208100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGCTCCCGCACTCGTACACCGTCGATTCCCTCTCCAAGTCCCAAGACCTCGCCAGCACCATCCTCGCCTCCTCCGCGCCGCACCAGATCTCCTCCGCCTGCGACTCCGTCCACTCCTTCCTCCACTCCCTCCCTCCCGACCACTCCCGCCACTTCTTCTCCCTCACCTTCCCCACCCTCATCTGCAAGCTGTTCGGCTTCGACGACGCCACGTCATCATCTCCCTCTCCCTCTCCCTCATCTCCCTCCCACGGCTGGATCGACACCGTCCTCGCCTCAAACGACGTCGAATTGGCCAACAAGCTCTTCTCCCTCCTCGCCCCGACCGGCCTCCTCTTCACCTCAATCTCCGCCGTCGATCGCCTCTCCCTCGTCAAGTACGTCTTCCCCATCGAACGGCTCCCGGAATGGGTGCGGTTCATGCTCTCCTCGGAGAAAGACAGCCGGGCGCTCTCCGATTTAGCTCCGGTTTTCAAGAACAGGATTAAAGAAGATTCGATTCAGCCTAATTTCCATCAGGTTCAGCTCAATGTGTTTGAATATTACTTCTTCTGGTTCGCTTATTATCCTGTTTGCCGCGGAAATGGTGAGAATTGCGATACTGTTTCGGTTAGGAGGAACAAGAGATTCAAATTTGAGAATTGGGTTTCGTCAATTTCGGGGTTTTCGAGCCCTAGGCGTGGTGGCTCGGAGCTTAAAATCGAGTGTAATCTTTATATCAGGCTTTTATATGCTTATCTTAATGCATTTGTGGCTGTGACTGATTTGAATTCGCACCTGCCCTACCGGAGTTCGCTTTTGCACTACTCTCCCGGGTATGATAGCTCGGCCATAGTGAAGGGGGAGTTTTTGGTTAATGCGTTGGTCAATTTTTGGTTACTTGATAATGATTTTTCGCCACTATCTGCCGATTTGTGCAAGTCTTTTGGAGTTAAGTTTCCGTTGCGGTCGGTTTTAGGAGAGACCCCGCCAACGCCTGGATTAGGAGAGGTGGTGAAGTTGCTTGTCAAGTACTTGAATTTGGGTTTGGTGGTGCACCAGAATGGGACGGATAATGTGGAATATGGTGCGAGTCTGAGGTGGAGAATGTCGGGTTCGTTTGATGTTGGGAAGCCAATGGATGCAATGGCAGTGTCTCCCGGTGTGCTTCCAAATGGGTCTTGGAACTTGCTGATACAGAGGCCTTTGTACAGGTTTATATTGAGGACATTCTTGTTCTGCCCGGTGGGAGCTTCAATTAAGAACATTTCACAAGTTTTTTCGGTTTGGGTTACTTACTTGGAACCTTGGGCTATCAGTTTGGATGACTTTGGGGAGCTTGATGCTATTGTTGATGGATCAAATAAGAATGGGAGAAAGGATCACTCGCAGTCTGAAGCCTGTGGTTATTCACCTTCTTGGGAGGCTTATGTGTTGGCGAATTACTTGTACTACAGTTCCTTGGTTATGCATTTTATTGGGTTTGCACACAAGTTTCTTCACACTGATGCAGAAATAATAGTCCAGATGGTATCGAAGCTTCTAACTATATTGACATCATCCAAAGATCTACTTGATCTTATAAAGACGATGGATATTGCTTTTCACTCCAAACAAGCAGGATCAGGCAAATCGAGGCTTAATAGCTTATATAGATTTGTGACTCCAATTTGTGAGCAGTTGAAGGACTGGGAAGATGGCTTATGTGAAAGTGATGCTGATGGGTCTTTCTTGCATGATAATTGGAACAAAGATTTACGTCTGTTTAGTGATGGAGAAGATGGTGGGCGACAACTGCTTCAGTTGTTCATATTACGTGCAGAAGCCGAGTTGCAAGCAATTTCTTGTGATAACCTTGCTGAAAACCTTCAGTGCATAGACTCTTTAAAAGATCAGGTGGCCTGCTTGTTTGGTAGTGATGCTGTAAGGAAACTATCATTTTCCCCAGAAGCAAAACAGCCCGCTCAACCCCGTGATGAAATTTTCAAACCCAGGAGAATTGGCAACTATGCTTTGTCTGATATCAAATACAAGGGTGACTGGATGAAGCGTCCCATCTCTGATGATGAGGTTGCATGGCTTGCGAAACTGCTTGTCCTGTTTTCTTGCTGGCTAAATGAGATTCTCGGACTAAATCAGACTGAAAGCAACCAAGTGGGTTCAACACATTCTTACGTTAAGGTACCTTCAAGTGATGTTTCGGGCATCAAGGCAGTGTTGGGTGCTGTTGGCTCTTGGATTCTCATGTTGGGTGTGGGGGTGGTAAGGCTTGTGAGAAAACGTGGTCTGAGAGTGAACCTCAGGATGTTGGCCTCAAAGAAGGTTGTAATGATCTTGCTCTTGTCTGTTGTATATAGTGTATTAAAGAGCTTTTGGACTGTTTCATATGGTAGAGTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

mit_SMPDase

Protein Analysis

793

Amino Acids

88.69

Weight (kDa)

7.0

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47400
fragaria_vesca	FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410
malus_domestica	MD04G1060300.v1.1 MD06G1053300.v1.1
prunus_persica	Prupe.5G065400_v2.0.a1
pyrus_communis	pycom04g05390 pycom06g04500
rosa_chinensis	RchiOBHm_Chr7g0203921
rosa_laevigata	RLG00000003498
rosa_multiflora	Rmu_co8411937.1_g000001 Rmu_sc0013871.1_g000002 Rmu_sc0032022.1_g000002
rosa_roxburghii	Rroxscaffold_3G00253460
rosa_rugosa	Rorug07G0079400
rosa_samantha	Rh7AG209300 Rh7BG208100 Rh7CG221700 Rh7DG216400
rosa_wichuraiana	Rw7G018240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1562
AarI	CACCTGC	1 cut(s)	786
AatII	GACGTC	1 cut(s)	288
Acc36I	ACCTGC	1 cut(s)	786
Acc65I	GGTACC	1 cut(s)	2161
AccB1I	GGYRCC	1 cut(s)	2161
AccB7I	CCANNNNNTGG	1 cut(s)	977
AccBSI	CCGCTC	1 cut(s)	1943
AccII	CGCG	2 cut(s)	77, 579
AclWI	GGATC	4 cut(s)	266, 1345, 1368, 1609
AcoI	YGGCCR	2 cut(s)	294, 828
AcsI	RAATTY	4 cut(s)	632, 769, 1018, 1959
AcuI	CTGAAG	3 cut(s)	1395, 1763, 1832
AcyI	GRCGYC	2 cut(s)	207, 285
AfaI	GTAC	6 cut(s)	17, 380, 1013, 1190, 1430, 2163
AfiI	CCNNNNNNNGG	7 cut(s)	251, 255, 396, 409, 680, 977, 983
AhdI	GACNNNNNGTC	1 cut(s)	211
AjiI	CACGTC	1 cut(s)	213
AjnI	CCWGG	2 cut(s)	976, 1970
AjuI	GAANNNNNNNTTGG	4 cut(s)	290, 322, 1010, 1042
Alw21I	GWGCWC	1 cut(s)	1038
Alw26I	GTCTC	2 cut(s)	956, 1140
Alw44I	GTGCAC	1 cut(s)	1034
AlwI	GGATC	4 cut(s)	266, 1345, 1368, 1609
Ama87I	CYCGRG	1 cut(s)	812
AoxI	GGCC	6 cut(s)	294, 328, 828, 1181, 1878, 2289
ApaLI	GTGCAC	1 cut(s)	1034
ApoI	RAATTY	4 cut(s)	632, 769, 1018, 1959
Asp700I	GAANNNNTTC	1 cut(s)	1845
Asp718I	GGTACC	1 cut(s)	2161
AspA2I	CCTAGG	1 cut(s)	674
AspLEI	GCGC	2 cut(s)	79, 451
AsuC2I	CCSGG	6 cut(s)	404, 446, 813, 814, 1140, 1223
AsuHPI	GGTGA	6 cut(s)	157, 331, 599, 1006, 1383, 2027
AvaI	CYCGRG	1 cut(s)	812
AvrII	CCTAGG	1 cut(s)	674
AxyI	CCTNAGG	1 cut(s)	2279
BaeGI	GKGCMC	1 cut(s)	1038
BalI	TGGCCA	1 cut(s)	296
BanI	GGYRCC	1 cut(s)	2161
BanII	GRGCYC	1 cut(s)	674
BarI	GAAGNNNNNNTAC	2 cut(s)	1503, 1535
BbsI	GAAGAC	1 cut(s)	376
Bbv12I	GWGCWC	1 cut(s)	1038
BceAI	ACGGC	3 cut(s)	268, 338, 413
BcgI	CGANNNNNNTGC	4 cut(s)	46, 80, 175, 209
BciT130I	CCWGG	2 cut(s)	978, 1972
BcnI	CCSGG	6 cut(s)	404, 446, 813, 814, 1140, 1223
BcoDI	GTCTC	2 cut(s)	956, 1140
BfaI	CTAG	1 cut(s)	675
BfmI	CTRYAG	1 cut(s)	1432
BfoI	RGCGCY	1 cut(s)	452
BfuAI	ACCTGC	1 cut(s)	786
BglII	AGATCT	2 cut(s)	87, 1546
BisI	GCNGC	2 cut(s)	80, 577
BlnI	CCTAGG	1 cut(s)	674
BlsI	GCNGC	2 cut(s)	81, 578
BmcAI	AGTACT	1 cut(s)	1013
Bme1390I	CCNGG	8 cut(s)	404, 446, 813, 814, 978, 1140, 1223, 1972
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmeT110I	CYCGRG	1 cut(s)	812
BmgBI	CACGTC	1 cut(s)	213
BmiI	GGNNCC	3 cut(s)	401, 1284, 2163
BmrFI	CCNGG	8 cut(s)	404, 446, 813, 814, 978, 1140, 1223, 1972
BmrI	ACTGGG	1 cut(s)	1678
BmsI	GCATC	6 cut(s)	1111, 1312, 1477, 1684, 1888, 2193
BmuI	ACTGGG	1 cut(s)	1678
BpiI	GAAGAC	1 cut(s)	376
BplI	GAGNNNNNCTC	2 cut(s)	2262, 2294
BpuMI	CCSGG	6 cut(s)	404, 446, 813, 814, 1140, 1223
BsaAI	YACGTR	1 cut(s)	1796
BsaHI	GRCGYC	2 cut(s)	207, 285
BsaI	GGTCTC	1 cut(s)	956
BsaJI	CCNNGG	8 cut(s)	250, 429, 577, 674, 812, 1286, 1440, 1970
BsaWI	WCCGGW	2 cut(s)	466, 786
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 143, 173, 978, 1008
Bsc4I	CCNNNNNNNGG	7 cut(s)	251, 255, 396, 409, 680, 977, 983
Bse118I	RCCGGY	1 cut(s)	326
Bse1I	ACTGG	2 cut(s)	1673, 2024
Bse21I	CCTNAGG	1 cut(s)	2279
Bse3DI	GCAATG	1 cut(s)	1131
BseBI	CCWGG	2 cut(s)	978, 1972
BseDI	CCNNGG	8 cut(s)	250, 429, 577, 674, 812, 1286, 1440, 1970
BseGI	GGATG	6 cut(s)	60, 1126, 1309, 1538, 2028, 2289
BseLI	CCNNNNNNNGG	7 cut(s)	251, 255, 396, 409, 680, 977, 983
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	3 cut(s)	1067, 2258, 2293
BseNI	ACTGG	2 cut(s)	1673, 2024
BseRI	GAGGAG	5 cut(s)	61, 82, 305, 323, 418
BseSI	GKGCMC	1 cut(s)	1038
BsgI	GTGCAG	1 cut(s)	1818
Bsh1236I	CGCG	2 cut(s)	77, 579
Bsh1285I	CGRYCG	3 cut(s)	327, 361, 950
BshFI	GGCC	6 cut(s)	296, 330, 830, 1183, 1880, 2291
BshNI	GGYRCC	1 cut(s)	2161
BsiEI	CGRYCG	3 cut(s)	327, 361, 950
BsiHKAI	GWGCWC	1 cut(s)	1038
BsiHKCI	CYCGRG	1 cut(s)	812
BsiSI	CCGG	8 cut(s)	327, 404, 445, 467, 787, 813, 1140, 1223
BslFI	GGGAC	3 cut(s)	25, 1060, 2016
BslI	CCNNNNNNNGG	7 cut(s)	251, 255, 396, 409, 680, 977, 983
BsmAI	GTCTC	2 cut(s)	956, 1140
BsmFI	GGGAC	3 cut(s)	25, 1060, 2016
BsnI	GGCC	6 cut(s)	296, 330, 830, 1183, 1880, 2291
Bso31I	GGTCTC	1 cut(s)	956
BsoBI	CYCGRG	1 cut(s)	812
Bsp1286I	GDGCHC	2 cut(s)	674, 1038
Bsp1407I	TGTACA	1 cut(s)	1188
BspANI	GGCC	6 cut(s)	296, 330, 830, 1183, 1880, 2291
BspCNI	CTCAG	3 cut(s)	1068, 2259, 2292
BspFNI	CGCG	2 cut(s)	77, 579
BspLI	GGNNCC	3 cut(s)	401, 1284, 2163
BspMI	ACCTGC	1 cut(s)	786
BspPI	GGATC	4 cut(s)	266, 1345, 1368, 1609
BspQI	GCTCTTC	1 cut(s)	311
BspT107I	GGYRCC	1 cut(s)	2161
BspTNI	GGTCTC	1 cut(s)	956
BsrBI	CCGCTC	1 cut(s)	1943
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	1 cut(s)	326
BsrGI	TGTACA	1 cut(s)	1188
BsrI	ACTGG	2 cut(s)	1673, 2024
BssAI	RCCGGY	1 cut(s)	326
BssECI	CCNNGG	8 cut(s)	250, 429, 577, 674, 812, 1286, 1440, 1970
BssNI	GRCGYC	2 cut(s)	207, 285
BssT1I	CCWWGG	3 cut(s)	674, 1286, 1440
Bst2UI	CCWGG	2 cut(s)	978, 1972
Bst4CI	ACNGT	5 cut(s)	22, 268, 604, 1436, 2359
Bst6I	CTCTTC	2 cut(s)	311, 341
BstACI	GRCGYC	2 cut(s)	207, 285
BstAPI	GCANNNNNTGC	1 cut(s)	2060
BstAUI	TGTACA	1 cut(s)	1188
BstBAI	YACGTR	1 cut(s)	1796
BstC8I	GCNNGC	8 cut(s)	55, 100, 188, 1815, 1882, 1941, 2061, 2090
BstDEI	CTNAG	3 cut(s)	1076, 2267, 2279
BstDSI	CCRYGG	2 cut(s)	250, 577
BstENI	CCTNNNNNAGG	1 cut(s)	981
BstF5I	GGATG	6 cut(s)	60, 1126, 1309, 1538, 2028, 2289
BstFNI	CGCG	2 cut(s)	77, 579
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	2 cut(s)	79, 451
BstMAI	GTCTC	2 cut(s)	956, 1140
BstMCI	CGRYCG	3 cut(s)	327, 361, 950
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 421, 752, 1774, 2060
BstNI	CCWGG	2 cut(s)	978, 1972
BstSCI	CCNGG	8 cut(s)	402, 444, 811, 812, 976, 1138, 1221, 1970
BstSFI	CTRYAG	1 cut(s)	1432
BstSLI	GKGCMC	1 cut(s)	1038
BstUI	CGCG	2 cut(s)	77, 579
BstV2I	GAAGAC	1 cut(s)	376
BstX2I	RGATCY	2 cut(s)	87, 1546
BstYI	RGATCY	2 cut(s)	87, 1546
Bsu36I	CCTNAGG	1 cut(s)	2279
BsuRI	GGCC	6 cut(s)	296, 330, 830, 1183, 1880, 2291
BtgI	CCRYGG	2 cut(s)	250, 577
BtrI	CACGTC	1 cut(s)	213
BtsCI	GGATG	6 cut(s)	60, 1126, 1309, 1538, 2028, 2289
BtsI	GCAGTG	2 cut(s)	1137, 2199
BtsIMutI	CAGTG	4 cut(s)	1137, 1482, 1856, 2199
BveI	ACCTGC	1 cut(s)	786
Cac8I	GCNNGC	8 cut(s)	55, 100, 188, 1815, 1882, 1941, 2061, 2090
CfoI	GCGC	2 cut(s)	79, 451
Cfr10I	RCCGGY	1 cut(s)	326
Cfr42I	CCGCGG	1 cut(s)	580
Cfr9I	CCCGGG	1 cut(s)	812
CseI	GACGC	2 cut(s)	215, 2018
Csp6I	GTAC	6 cut(s)	16, 379, 1012, 1189, 1429, 2162
CviAII	CATG	4 cut(s)	421, 1715, 2055, 2224
CviQI	GTAC	6 cut(s)	16, 379, 1012, 1189, 1429, 2162
DdeI	CTNAG	3 cut(s)	1076, 2267, 2279
DraI	TTTAAA	1 cut(s)	1866
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	2 cut(s)	294, 828
Eam1104I	CTCTTC	2 cut(s)	311, 341
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EarI	CTCTTC	2 cut(s)	311, 341
EciI	GGCGGA	2 cut(s)	85, 340
Eco130I	CCWWGG	3 cut(s)	674, 1286, 1440
Eco147I	AGGCCT	1 cut(s)	1183
Eco24I	GRGCYC	1 cut(s)	674
Eco31I	GGTCTC	1 cut(s)	956
Eco32I	GATATC	1 cut(s)	2002
Eco57I	CTGAAG	3 cut(s)	1395, 1763, 1832
Eco81I	CCTNAGG	1 cut(s)	2279
Eco88I	CYCGRG	1 cut(s)	812
EcoNI	CCTNNNNNAGG	1 cut(s)	981
EcoRI	GAATTC	1 cut(s)	769
EcoRII	CCWGG	2 cut(s)	976, 1970
EcoRV	GATATC	1 cut(s)	2002
EcoT14I	CCWWGG	3 cut(s)	674, 1286, 1440
EcoT22I	ATGCAT	2 cut(s)	748, 1452
EcoT38I	GRGCYC	1 cut(s)	674
ErhI	CCWWGG	3 cut(s)	674, 1286, 1440
FaeI	CATG	4 cut(s)	424, 1718, 2058, 2227
FalI	AAGNNNNNCTT	4 cut(s)	368, 400, 1536, 1568
FaqI	GGGAC	3 cut(s)	25, 1060, 2016
FatI	CATG	4 cut(s)	420, 1714, 2054, 2223
FauI	CCCGC	4 cut(s)	15, 155, 975, 1948
FauNDI	CATATG	1 cut(s)	2365
Fnu4HI	GCNGC	2 cut(s)	80, 577
FokI	GGATG	6 cut(s)	47, 1133, 1316, 1525, 2035, 2296
FriOI	GRGCYC	1 cut(s)	674
Fsp4HI	GCNGC	2 cut(s)	80, 577
FspBI	CTAG	1 cut(s)	675
GlaI	GCGC	2 cut(s)	78, 450
GluI	GCNGC	2 cut(s)	80, 577
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	6 cut(s)	296, 330, 830, 1183, 1880, 2291
HapII	CCGG	8 cut(s)	327, 404, 445, 467, 787, 813, 1140, 1223
HgaI	GACGC	2 cut(s)	215, 2018
HhaI	GCGC	2 cut(s)	79, 451
Hin1I	GRCGYC	2 cut(s)	207, 285
Hin1II	CATG	4 cut(s)	424, 1718, 2058, 2227
Hin6I	GCGC	2 cut(s)	77, 449
HinP1I	GCGC	2 cut(s)	77, 449
HindIII	AAGCTT	1 cut(s)	1517
HpaII	CCGG	8 cut(s)	327, 404, 445, 467, 787, 813, 1140, 1223
HphI	GGTGA	6 cut(s)	157, 331, 599, 1006, 1383, 2027
Hpy166II	GTNNAC	4 cut(s)	18, 112, 1036, 2275
Hpy188III	TCNNGA	4 cut(s)	137, 475, 1504, 2281
Hpy8I	GTNNAC	4 cut(s)	18, 112, 1036, 2275
Hpy99I	CGWCG	6 cut(s)	26, 206, 209, 287, 290, 359
HpyAV	CCTTC	8 cut(s)	127, 178, 832, 1404, 1657, 1856, 2175, 2293
HpyCH4III	ACNGT	5 cut(s)	22, 268, 604, 1436, 2359
HpyCH4IV	ACGT	7 cut(s)	212, 285, 381, 1738, 1795, 2154, 2260
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 421, 752, 1774, 2060
HpyF3I	CTNAG	3 cut(s)	1076, 2267, 2279
HpySE526I	ACGT	7 cut(s)	212, 285, 381, 1738, 1795, 2154, 2260
Hsp92I	GRCGYC	2 cut(s)	207, 285
Hsp92II	CATG	4 cut(s)	424, 1718, 2058, 2227
HspAI	GCGC	2 cut(s)	77, 449
KpnI	GGTACC	1 cut(s)	2165
KspI	CCGCGG	1 cut(s)	580
LguI	GCTCTTC	1 cut(s)	311
LmnI	GCTCC	6 cut(s)	9, 405, 469, 691, 1229, 1315
LweI	GCATC	6 cut(s)	1111, 1312, 1477, 1684, 1888, 2193
MaeI	CTAG	1 cut(s)	675
MaeII	ACGT	7 cut(s)	212, 285, 381, 1738, 1795, 2154, 2260
MaeIII	GTNAC	5 cut(s)	757, 876, 1270, 1639, 2015
MbiI	CCGCTC	1 cut(s)	1943
MboII	GAAGA	9 cut(s)	148, 298, 328, 376, 503, 541, 1469, 1685, 1769
MflI	RGATCY	2 cut(s)	87, 1546
MhlI	GDGCHC	2 cut(s)	674, 1038
MlsI	TGGCCA	1 cut(s)	296
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	4 cut(s)	98, 1081, 1636, 1853
Mox20I	TGGCCA	1 cut(s)	296
Mph1103I	ATGCAT	2 cut(s)	748, 1452
MroXI	GAANNNNTTC	1 cut(s)	1845
MscI	TGGCCA	1 cut(s)	296
MslI	CAYNNNNRTG	2 cut(s)	1041, 1485
Msp20I	TGGCCA	1 cut(s)	296
MspA1I	CMGCKG	1 cut(s)	579
MspI	CCGG	8 cut(s)	327, 404, 445, 467, 787, 813, 1140, 1223
MspR9I	CCNGG	8 cut(s)	404, 446, 813, 814, 978, 1140, 1223, 1972
MvaI	CCWGG	2 cut(s)	978, 1972
MvnI	CGCG	2 cut(s)	77, 579
MwoI	GCNNNNNNNGC	5 cut(s)	74, 421, 752, 1774, 2060
NciI	CCSGG	6 cut(s)	404, 446, 813, 814, 1140, 1223
NdeI	CATATG	1 cut(s)	2365
NlaIII	CATG	4 cut(s)	424, 1718, 2058, 2227
NlaIV	GGNNCC	3 cut(s)	401, 1284, 2163
NmeAIII	GCCGAG	2 cut(s)	806, 1831
NmuCI	GTSAC	3 cut(s)	757, 1639, 2015
NsiI	ATGCAT	2 cut(s)	748, 1452
PaqCI	CACCTGC	1 cut(s)	786
PceI	AGGCCT	1 cut(s)	1183
PciSI	GCTCTTC	1 cut(s)	311
PcsI	WCGNNNNNNNCGW	5 cut(s)	201, 258, 279, 378, 665
PdmI	GAANNNNTTC	1 cut(s)	1845
PfeI	GAWTC	6 cut(s)	26, 494, 499, 627, 2101, 2218
PflFI	GACNNNGTC	2 cut(s)	107, 266
PflMI	CCANNNNNTGG	1 cut(s)	977
PfoI	TCCNGGA	1 cut(s)	402
PkrI	GCNGC	2 cut(s)	81, 578
Ple19I	CGATCG	1 cut(s)	361
PleI	GAGTC	4 cut(s)	98, 1080, 1636, 1853
PpsI	GAGTC	4 cut(s)	98, 1080, 1636, 1853
Ppu21I	YACGTR	1 cut(s)	1796
PsiI	TTATAA	1 cut(s)	1562
Psp6I	CCWGG	2 cut(s)	976, 1970
PspGI	CCWGG	2 cut(s)	976, 1970
PspN4I	GGNNCC	3 cut(s)	401, 1284, 2163
PsuI	RGATCY	2 cut(s)	87, 1546
PsyI	GACNNNGTC	2 cut(s)	107, 266
PvuI	CGATCG	1 cut(s)	361
RsaI	GTAC	6 cut(s)	17, 380, 1013, 1190, 1430, 2163
RsaNI	GTAC	6 cut(s)	16, 379, 1012, 1189, 1429, 2162
RseI	CAYNNNNRTG	2 cut(s)	1041, 1485
SacII	CCGCGG	1 cut(s)	580
SapI	GCTCTTC	1 cut(s)	311
SatI	GCNGC	2 cut(s)	80, 577
ScaI	AGTACT	1 cut(s)	1013
SchI	GAGTC	4 cut(s)	98, 1081, 1636, 1853
ScrFI	CCNGG	8 cut(s)	404, 446, 813, 814, 978, 1140, 1223, 1972
SduI	GDGCHC	2 cut(s)	674, 1038
SfaNI	GCATC	6 cut(s)	1111, 1312, 1477, 1684, 1888, 2193
SfcI	CTRYAG	1 cut(s)	1432
Sfr303I	CCGCGG	1 cut(s)	580
SgrBI	CCGCGG	1 cut(s)	580
SmaI	CCCGGG	1 cut(s)	814
SmiMI	CAYNNNNRTG	2 cut(s)	1041, 1485
SseBI	AGGCCT	1 cut(s)	1183
SspI	AATATT	1 cut(s)	542
SspMI	CTAG	1 cut(s)	675
StuI	AGGCCT	1 cut(s)	1183
StyD4I	CCNGG	8 cut(s)	402, 444, 811, 812, 976, 1138, 1221, 1970
StyI	CCWWGG	3 cut(s)	674, 1286, 1440
TaaI	ACNGT	5 cut(s)	22, 268, 604, 1436, 2359
TaiI	ACGT	7 cut(s)	215, 288, 384, 1741, 1798, 2157, 2263
TatI	WGTACW	3 cut(s)	1011, 1188, 1428
TauI	GCSGC	2 cut(s)	82, 579
TfiI	GAWTC	6 cut(s)	26, 494, 499, 627, 2101, 2218
TscAI	CASTG	4 cut(s)	1137, 1489, 1856, 2199
TseFI	GTSAC	3 cut(s)	757, 1639, 2015
Tsp45I	GTSAC	3 cut(s)	757, 1639, 2015
TspDTI	ATGAA	5 cut(s)	409, 1777, 1971, 2039, 2352
TspGWI	ACGGA	3 cut(s)	97, 930, 1064
TspMI	CCCGGG	1 cut(s)	812
TspRI	CASTG	4 cut(s)	1137, 1489, 1856, 2199
Tth111I	GACNNNGTC	2 cut(s)	107, 266
Van91I	CCANNNNNTGG	1 cut(s)	977
VneI	GTGCAC	1 cut(s)	1034
XagI	CCTNNNNNAGG	1 cut(s)	981
XapI	RAATTY	4 cut(s)	632, 769, 1018, 1959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1158
XmaI	CCCGGG	1 cut(s)	812
XmaJI	CCTAGG	1 cut(s)	674
XmnI	GAANNNNTTC	1 cut(s)	1845
XspI	CTAG	1 cut(s)	675
ZraI	GACGTC	1 cut(s)	286
ZrmI	AGTACT	1 cut(s)	1013
Zsp2I	ATGCAT	2 cut(s)	748, 1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.