Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0005128

Physical Location & Seq

Genomic Coordinates Reverse (-)

5770851 .. 5774298

Gene Structure 3448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g04500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGCTCCCGCACTCGTACGTCGTCGATTCCCATTCCAAATCCCAAGACCTCGCCTGTACCATCCTCGCCTCCTCCGCCCCGCACCAGATCTCCTCCACCTGCGCCTCCATCGAGTCTTTCCTGCACTCCCTCTCACCCGACCAATCCCGCCACTTCTTCTCCCTCACTTTCCCAACCCTCATCTGCAAGCTCTTCGGCTTCGAGGATGCAACGTCATCACCGCCGCCTCTGCCACAACCAACTTCACAGCAACAACCCTCGCCCTCCTCCCCTTCCTCCTCACCCAACGGCTGGATTGATACCGTCCTAGCGTCCAACGACGTAGATTTAGCCAACAGACTCTTCGCCCTCCTCGCCCCCAACAGCCTCCTCTTCAACGCAATATCCGCCGTTGATCGCCTCTCCCTCGTCAAATACGTGTTCCCTATTGAACGATTGCCGGAATGGGTCCGATTCATCCTCTCGTCGGAAAATGATAGCCGGGTATTATCCGATTTAGCCCCAATTTTCAAAAATAGGGTTAAGGAAGACTCAATTAAACCCAATTTCTATCAACTCCAGCTCAATGTCTTTGAATATTACATGTTTTGGTTCGCTTATTACCCTGTTTGTCGGGGAAACGGCGAAAATTGTGATGTTGTTTCTATAAAAAGGAACAAAAGGTTTAAATTTGAGAATTGGGTTTCATCAATTTCTGGTTTTTCAAGCACTAGGCGCGGGGCGGAGGTTAAAATTGAATGCAACTTATATATTAAGTTTTTGTATGCATATCTTCGTGCTTTTGTTGGTGTAACTGATTTGAATCAGCAACTGCCACACCGTAGTTCGCTTTTGCATTACTCATCGGGATATGATAGCTCGGTCATAGCTCAGGCAGAGTTTTTTGTTAATGCTTTGGTGAACTTTTGGTTGGTTGATAATGATTTTTCACCGCTACCTGTTAATCTTTGCAAGTCATCTGGGGTTTCATTCCCATTCCGATCAGTTTTGGGCGAGACCCCACCAACCCCCGGGTTAGGAGAGGTGGTGAAGTTGTTTGTGAAGTACTTGAATTTGGGTTTGGTCGTGCATAGAGATGGAAATGAGAATATGGAAAACTATGGGAGTCCGAGGTGGAGAGTGCCGGGTTCATTTGATGCCTTCAAGTTGAGGGATGTAGTGGCGGTTTCACCAGGTATCGGATCTTGGAACTTGCTGATACAGAGGCCGCTGTACCGGTTTATATTGAGGACGTTCTTGTTTTGTCCAGTGGGGGCTTCGATTAAAAATATATCAGAGGTGTTTTCGGTTTGGATTACCTATATTGAACCTTGGGATATTAGTTTGGATGACTTTTCAGATCTTGATACTGTTTTTGACGGATCAACTAAGAACGGGAGAAAGGATAGCCCGCAGCCTCAAGACCGTTGCTTTACATCTTCTTGGCAGGGTTATGTGCTGGCCAACTACTTGTATTACAGTTCCTTGGTTATGCATTTTATTGGGTTTGCCCACAAGTTTCTTCACACTGATCCAGAAATAATTGTCCAGATGGTATTGAAGATCCTAACTATATTGACATCATCCAAAGAACTCATGGACCTTTTAAAGATGGTGGATACTGCTTTTCATTCCAAACAAGCAGGATCAGGAAAATCGATGCGTAATAGGTTATATAGATTTGTCACTCCAATTCGCGAACAGCTCCAGGACTGGGAGGATGGCTTATCTGAGAGTGATGCAGATGGGTCTTTCTTGCATGAGAATTGGAATAAAGATTTACGATTGTTCAGTGATGGAGAAGATGGCGGGCAACAGTTGCTTCAGTTGTTCATATTACGCGCAGAAGCTGAGTTGCTAGCTGTTTCTGGTGATAATGGTGCGCACAACCTTCAGTGCATAGACTCTTTGAAAGCTCAGGTGAGCTATGTATTTGGTGGGCATACTGTAAAGGTACTGTCATTTTCTCCTGAACCAAAACAGCCTCCGCAACCCCGTGATGAAATATTCAAGCCCAGGAGAGTTGGCAACCACACTCTGGCTGATGTCAAATACAAGGGTGACTGGATGAAGCGCCCCATCTCCGATGATGAGGTTGCTTGGATGGCGAGATTACTTGTTGAGTTTTCTGGTTGGATAAATGAGCGTCTTGGACTAAACCAGTCGGAGAGCAGCCAAGCTGGCCCTTCATATGTGGAAGTGTCGAGCGATGTTGTGGGCAATGTGTTTGGACTGACGGATACGATGAAGGCAGTGTTGGGTGCAGTAGGTTCTTGGCTTGTGATGTTGGGGGTGGCAGTGGTGAAGCTAATGAGGAAACATGGATTGAGGGTGAATCTGAGGATGTTGGCGTCAAAGAAGGTTGTAATGGTTTTGCTTTTGTCTGCTGTGTATACTATATTGAAGAAAGCTTTTGGAATGTACCAAAGGGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

mit_SMPDase

Protein Analysis

805

Amino Acids

90.51

Weight (kDa)

6.99

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47400
fragaria_vesca	FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410
malus_domestica	MD04G1060300.v1.1 MD06G1053300.v1.1
prunus_persica	Prupe.5G065400_v2.0.a1
pyrus_communis	pycom04g05390 pycom06g04500
rosa_chinensis	RchiOBHm_Chr7g0203921
rosa_laevigata	RLG00000003498
rosa_multiflora	Rmu_co8411937.1_g000001 Rmu_sc0013871.1_g000002 Rmu_sc0032022.1_g000002
rosa_roxburghii	Rroxscaffold_3G00253460
rosa_rugosa	Rorug07G0079400
rosa_samantha	Rh7AG209300 Rh7BG208100 Rh7CG221700 Rh7DG216400
rosa_wichuraiana	Rw7G018240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	107
Acc16I	TGCGCA	1 cut(s)	1863
Acc36I	ACCTGC	1 cut(s)	107
AccB7I	CCANNNNNTGG	2 cut(s)	291, 2017
AccI	GTMKAC	1 cut(s)	2372
AccII	CGCG	3 cut(s)	717, 1677, 1821
AclWI	GGATC	5 cut(s)	1189, 1369, 1505, 1537, 1633
AcoI	YGGCCR	1 cut(s)	1440
AcsI	RAATTY	2 cut(s)	668, 1051
AcuI	CTGAAG	2 cut(s)	1787, 1856
AcyI	GRCGYC	1 cut(s)	2330
AfaI	GTAC	6 cut(s)	17, 58, 1046, 1214, 1935, 2402
AfiI	CCNNNNNNNGG	7 cut(s)	291, 466, 1010, 1016, 1178, 1693, 2017
AflIII	ACRYGT	2 cut(s)	417, 582
AgeI	ACCGGT	1 cut(s)	1215
AjnI	CCWGG	3 cut(s)	1171, 1686, 1994
AjuI	GAANNNNNNNTTGG	8 cut(s)	326, 358, 893, 925, 1043, 1075, 2219, 2251
Alw26I	GTCTC	1 cut(s)	989
AlwI	GGATC	5 cut(s)	1189, 1369, 1505, 1537, 1633
AlwNI	CAGNNNCTG	2 cut(s)	811, 1829
Ama87I	CYCGRG	1 cut(s)	1010
AoxI	GGCC	3 cut(s)	1205, 1440, 2161
ApeKI	GCWGC	2 cut(s)	1393, 2151
ApoI	RAATTY	2 cut(s)	668, 1051
AsiGI	ACCGGT	1 cut(s)	1215
AspLEI	GCGC	5 cut(s)	104, 717, 1823, 1864, 2055
AspS9I	GGNCC	3 cut(s)	448, 1579, 2162
AsuC2I	CCSGG	4 cut(s)	482, 1011, 1012, 1125
AsuNHI	GCTAGC	1 cut(s)	1837
AvaI	CYCGRG	1 cut(s)	1010
AvaII	GGWCC	2 cut(s)	448, 1579
BalI	TGGCCA	1 cut(s)	1442
BbsI	GAAGAC	1 cut(s)	534
BbvI	GCAGC	2 cut(s)	1405, 2163
BceAI	ACGGC	3 cut(s)	304, 374, 637
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	3 cut(s)	1173, 1688, 1996
BciVI	GTATCC	2 cut(s)	1591, 2212
BcnI	CCSGG	4 cut(s)	482, 1011, 1012, 1125
BcoDI	GTCTC	1 cut(s)	989
BfaI	CTAG	3 cut(s)	308, 711, 1838
BfoI	RGCGCY	1 cut(s)	2056
BfuAI	ACCTGC	1 cut(s)	107
BfuI	GTATCC	2 cut(s)	1591, 2212
BglI	GCCNNNNNGGC	1 cut(s)	2160
BglII	AGATCT	2 cut(s)	87, 1339
BisI	GCNGC	4 cut(s)	224, 1208, 1394, 2152
BlsI	GCNGC	4 cut(s)	225, 1209, 1395, 2153
BmcAI	AGTACT	1 cut(s)	1046
Bme1390I	CCNGG	7 cut(s)	482, 1011, 1012, 1125, 1173, 1688, 1996
Bme18I	GGWCC	2 cut(s)	448, 1579
BmeT110I	CYCGRG	1 cut(s)	1010
BmgT120I	GGNCC	3 cut(s)	448, 1579, 2162
BmiI	GGNNCC	1 cut(s)	449
BmrFI	CCNGG	7 cut(s)	482, 1011, 1012, 1125, 1173, 1688, 1996
BmrI	ACTGGG	1 cut(s)	1702
BmsI	GCATC	4 cut(s)	196, 1126, 1629, 1708
BmtI	GCTAGC	1 cut(s)	1841
BmuI	ACTGGG	1 cut(s)	1702
BpiI	GAAGAC	1 cut(s)	534
BpmI	CTGGAG	2 cut(s)	542, 1670
Bpu10I	CCTNAGC	2 cut(s)	870, 1896
BpuEI	CTTGAG	1 cut(s)	1383
BpuMI	CCSGG	4 cut(s)	482, 1011, 1012, 1125
Bsa29I	ATCGAT	1 cut(s)	1637
BsaAI	YACGTR	1 cut(s)	418
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	1 cut(s)	2330
BsaI	GGTCTC	1 cut(s)	989
BsaJI	CCNNGG	6 cut(s)	1009, 1010, 1109, 1310, 1464, 1994
BsaWI	WCCGGW	1 cut(s)	1215
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 143, 173, 1011, 1041
Bsc4I	CCNNNNNNNGG	7 cut(s)	291, 466, 1010, 1016, 1178, 1693, 2017
Bse118I	RCCGGY	1 cut(s)	1215
Bse1I	ACTGG	4 cut(s)	1247, 1697, 2048, 2140
Bse3DI	GCAATG	1 cut(s)	2206
Bse8I	GATNNNNATC	1 cut(s)	801
BseBI	CCWGG	3 cut(s)	1173, 1688, 1996
BseCI	ATCGAT	1 cut(s)	1637
BseDI	CCNNGG	6 cut(s)	1009, 1010, 1109, 1310, 1464, 1994
BseJI	GATNNNNATC	1 cut(s)	801
BseLI	CCNNNNNNNGG	7 cut(s)	291, 466, 1010, 1016, 1178, 1693, 2017
BseMI	GCAATG	1 cut(s)	2206
BseMII	CTCAG	5 cut(s)	884, 1701, 1821, 1910, 2309
BseNI	ACTGG	4 cut(s)	1247, 1697, 2048, 2140
BseRI	GAGGAG	6 cut(s)	61, 82, 256, 268, 341, 359
BseXI	GCAGC	2 cut(s)	1405, 2163
BsgI	GTGCAG	2 cut(s)	107, 2262
Bsh1236I	CGCG	3 cut(s)	717, 1677, 1821
BshFI	GGCC	3 cut(s)	1207, 1442, 2163
BshTI	ACCGGT	1 cut(s)	1215
BshVI	ATCGAT	1 cut(s)	1637
BsiHKCI	CYCGRG	1 cut(s)	1010
BsiSI	CCGG	5 cut(s)	440, 481, 1011, 1124, 1216
BsiWI	CGTACG	1 cut(s)	15
BslI	CCNNNNNNNGG	7 cut(s)	291, 466, 1010, 1016, 1178, 1693, 2017
BsmAI	GTCTC	1 cut(s)	989
BsmI	GAATGC	1 cut(s)	743
BsnI	GGCC	3 cut(s)	1207, 1442, 2163
Bso31I	GGTCTC	1 cut(s)	989
BsoBI	CYCGRG	1 cut(s)	1010
Bsp143I	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
Bsp68I	TCGCGA	1 cut(s)	1677
BspANI	GGCC	3 cut(s)	1207, 1442, 2163
BspCNI	CTCAG	5 cut(s)	883, 1702, 1822, 1909, 2310
BspDI	ATCGAT	1 cut(s)	1637
BspFNI	CGCG	3 cut(s)	717, 1677, 1821
BspLI	GGNNCC	1 cut(s)	449
BspMI	ACCTGC	1 cut(s)	107
BspOI	GCTAGC	1 cut(s)	1841
BspPI	GGATC	5 cut(s)	1189, 1369, 1505, 1537, 1633
BspQI	GCTCTTC	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	989
BsrDI	GCAATG	1 cut(s)	2206
BsrFI	RCCGGY	1 cut(s)	1215
BsrI	ACTGG	4 cut(s)	1247, 1697, 2048, 2140
BssAI	RCCGGY	1 cut(s)	1215
BssECI	CCNNGG	6 cut(s)	1009, 1010, 1109, 1310, 1464, 1994
BssMI	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
BssNAI	GTATAC	1 cut(s)	2373
BssNI	GRCGYC	1 cut(s)	2330
BssT1I	CCWWGG	2 cut(s)	1310, 1464
Bst1107I	GTATAC	1 cut(s)	2373
Bst2UI	CCWGG	3 cut(s)	1173, 1688, 1996
Bst4CI	ACNGT	8 cut(s)	304, 821, 1351, 1406, 1460, 1797, 1927, 1938
Bst6I	CTCTTC	3 cut(s)	197, 347, 377
BstACI	GRCGYC	1 cut(s)	2330
BstAPI	GCANNNNNTGC	1 cut(s)	1798
BstBAI	YACGTR	1 cut(s)	418
BstC8I	GCNNGC	6 cut(s)	188, 1391, 1440, 1790, 1839, 2161
BstDEI	CTNAG	6 cut(s)	870, 1368, 1710, 1830, 1896, 2318
BstFNI	CGCG	3 cut(s)	717, 1677, 1821
BstH2I	RGCGCY	1 cut(s)	2056
BstHHI	GCGC	5 cut(s)	104, 717, 1823, 1864, 2055
BstKTI	GATC	9 cut(s)	90, 397, 983, 1184, 1342, 1364, 1513, 1545, 1628
BstMAI	GTCTC	1 cut(s)	989
BstMBI	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 229, 353, 386, 714, 1798, 2084, 2160
BstNI	CCWGG	3 cut(s)	1173, 1688, 1996
BstNSI	RCATGY	1 cut(s)	586
BstSCI	CCNGG	7 cut(s)	480, 1009, 1010, 1123, 1171, 1686, 1994
BstUI	CGCG	3 cut(s)	717, 1677, 1821
BstV1I	GCAGC	2 cut(s)	1405, 2163
BstV2I	GAAGAC	1 cut(s)	534
BstX2I	RGATCY	4 cut(s)	87, 1181, 1339, 1542
BstYI	RGATCY	4 cut(s)	87, 1181, 1339, 1542
BstZ17I	GTATAC	1 cut(s)	2373
Bsu15I	ATCGAT	1 cut(s)	1637
BsuI	GTATCC	2 cut(s)	1591, 2212
BsuRI	GGCC	3 cut(s)	1207, 1442, 2163
BsuTUI	ATCGAT	1 cut(s)	1637
BtgZI	GCGATG	1 cut(s)	2202
BtsI	GCAGTG	2 cut(s)	2238, 2283
BtsIMutI	CAGTG	6 cut(s)	1254, 1506, 1777, 1880, 2238, 2283
BtuMI	TCGCGA	1 cut(s)	1677
BveI	ACCTGC	1 cut(s)	107
Cac8I	GCNNGC	6 cut(s)	188, 1391, 1440, 1790, 1839, 2161
CaiI	CAGNNNCTG	2 cut(s)	811, 1829
CfoI	GCGC	5 cut(s)	104, 717, 1823, 1864, 2055
Cfr10I	RCCGGY	1 cut(s)	1215
Cfr13I	GGNCC	3 cut(s)	448, 1579, 2162
Cfr9I	CCCGGG	1 cut(s)	1010
ClaI	ATCGAT	1 cut(s)	1637
CseI	GACGC	3 cut(s)	300, 2114, 2319
CsiI	ACCWGGT	1 cut(s)	1171
Csp6I	GTAC	6 cut(s)	16, 57, 1045, 1213, 1934, 2401
CspAI	ACCGGT	1 cut(s)	1215
CviAII	CATG	4 cut(s)	583, 1576, 1739, 2300
CviQI	GTAC	6 cut(s)	16, 57, 1045, 1213, 1934, 2401
DdeI	CTNAG	6 cut(s)	870, 1368, 1710, 1830, 1896, 2318
DpnI	GATC	9 cut(s)	89, 396, 982, 1183, 1341, 1363, 1512, 1544, 1627
DpnII	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
DraI	TTTAAA	2 cut(s)	667, 1587
EaeI	YGGCCR	1 cut(s)	1440
Eam1104I	CTCTTC	3 cut(s)	197, 347, 377
EarI	CTCTTC	3 cut(s)	197, 347, 377
EciI	GGCGGA	3 cut(s)	64, 376, 737
Eco130I	CCWWGG	2 cut(s)	1310, 1464
Eco31I	GGTCTC	1 cut(s)	989
Eco47I	GGWCC	2 cut(s)	448, 1579
Eco57I	CTGAAG	2 cut(s)	1787, 1856
Eco88I	CYCGRG	1 cut(s)	1010
EcoRII	CCWGG	3 cut(s)	1171, 1686, 1994
EcoT14I	CCWWGG	2 cut(s)	1310, 1464
EcoT22I	ATGCAT	2 cut(s)	769, 1476
ErhI	CCWWGG	2 cut(s)	1310, 1464
FaeI	CATG	4 cut(s)	586, 1579, 1742, 2303
FatI	CATG	4 cut(s)	582, 1575, 1738, 2299
FauI	CCCGC	6 cut(s)	15, 87, 155, 710, 1398, 1781
FauNDI	CATATG	1 cut(s)	2170
FblI	GTMKAC	1 cut(s)	2372
Fnu4HI	GCNGC	4 cut(s)	224, 1208, 1394, 2152
Fsp4HI	GCNGC	4 cut(s)	224, 1208, 1394, 2152
FspAI	RTGCGCAY	1 cut(s)	1863
FspBI	CTAG	3 cut(s)	308, 711, 1838
FspI	TGCGCA	1 cut(s)	1863
GlaI	GCGC	5 cut(s)	103, 716, 1822, 1863, 2054
GluI	GCNGC	4 cut(s)	224, 1208, 1394, 2152
GsuI	CTGGAG	2 cut(s)	542, 1670
HaeII	RGCGCY	1 cut(s)	2056
HaeIII	GGCC	3 cut(s)	1207, 1442, 2163
HapII	CCGG	5 cut(s)	440, 481, 1011, 1124, 1216
HgaI	GACGC	3 cut(s)	300, 2114, 2319
HhaI	GCGC	5 cut(s)	104, 717, 1823, 1864, 2055
Hin1I	GRCGYC	1 cut(s)	2330
Hin1II	CATG	4 cut(s)	586, 1579, 1742, 2303
Hin6I	GCGC	5 cut(s)	102, 715, 1821, 1862, 2053
HinP1I	GCGC	5 cut(s)	102, 715, 1821, 1862, 2053
HindIII	AAGCTT	1 cut(s)	2388
HinfI	GANTC	9 cut(s)	26, 113, 339, 453, 530, 802, 1105, 1883, 2314
HpaII	CCGG	5 cut(s)	440, 481, 1011, 1124, 1216
Hpy166II	GTNNAC	2 cut(s)	901, 2373
Hpy188III	TCNNGA	8 cut(s)	846, 1343, 1400, 1514, 1528, 1629, 1676, 1949
Hpy8I	GTNNAC	2 cut(s)	901, 2373
Hpy99I	CGWCG	4 cut(s)	23, 26, 323, 469
HpyAV	CCTTC	6 cut(s)	282, 1150, 1880, 2175, 2221, 2332
HpyCH4III	ACNGT	8 cut(s)	304, 821, 1351, 1406, 1460, 1797, 1927, 1938
HpyCH4IV	ACGT	5 cut(s)	18, 212, 321, 417, 1232
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 229, 353, 386, 714, 1798, 2084, 2160
HpyF3I	CTNAG	6 cut(s)	870, 1368, 1710, 1830, 1896, 2318
HpySE526I	ACGT	5 cut(s)	18, 212, 321, 417, 1232
Hsp92I	GRCGYC	1 cut(s)	2330
Hsp92II	CATG	4 cut(s)	586, 1579, 1742, 2303
HspAI	GCGC	5 cut(s)	102, 715, 1821, 1862, 2053
Kzo9I	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
LguI	GCTCTTC	1 cut(s)	197
LmnI	GCTCC	2 cut(s)	9, 1689
Lsp1109I	GCAGC	2 cut(s)	1405, 2163
LweI	GCATC	4 cut(s)	196, 1126, 1629, 1708
MabI	ACCWGGT	1 cut(s)	1171
MaeI	CTAG	3 cut(s)	308, 711, 1838
MaeII	ACGT	5 cut(s)	18, 212, 321, 417, 1232
MaeIII	GTNAC	3 cut(s)	790, 1663, 2039
MalI	GATC	9 cut(s)	89, 396, 982, 1183, 1341, 1363, 1512, 1544, 1627
MboI	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
MflI	RGATCY	4 cut(s)	87, 1181, 1339, 1542
MlsI	TGGCCA	1 cut(s)	1442
MluNI	TGGCCA	1 cut(s)	1442
MlyI	GAGTC	5 cut(s)	122, 333, 524, 1114, 1877
MmeI	TCCRAC	4 cut(s)	339, 447, 2093, 2124
Mox20I	TGGCCA	1 cut(s)	1442
Mph1103I	ATGCAT	2 cut(s)	769, 1476
MscI	TGGCCA	1 cut(s)	1442
MseI	TTAA	9 cut(s)	522, 537, 666, 729, 753, 888, 942, 1263, 1586
MslI	CAYNNNNRTG	1 cut(s)	1074
Msp20I	TGGCCA	1 cut(s)	1442
MspA1I	CMGCKG	1 cut(s)	1210
MspI	CCGG	5 cut(s)	440, 481, 1011, 1124, 1216
MspR9I	CCNGG	7 cut(s)	482, 1011, 1012, 1125, 1173, 1688, 1996
Mva1269I	GAATGC	1 cut(s)	743
MvaI	CCWGG	3 cut(s)	1173, 1688, 1996
MvnI	CGCG	3 cut(s)	717, 1677, 1821
MwoI	GCNNNNNNNGC	8 cut(s)	74, 229, 353, 386, 714, 1798, 2084, 2160
NciI	CCSGG	4 cut(s)	482, 1011, 1012, 1125
NdeI	CATATG	1 cut(s)	2170
NdeII	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
NheI	GCTAGC	1 cut(s)	1837
NlaIII	CATG	4 cut(s)	586, 1579, 1742, 2303
NlaIV	GGNNCC	1 cut(s)	449
NmuCI	GTSAC	2 cut(s)	1663, 2039
NruI	TCGCGA	1 cut(s)	1677
NsbI	TGCGCA	1 cut(s)	1863
NsiI	ATGCAT	2 cut(s)	769, 1476
NspI	RCATGY	1 cut(s)	586
PaqCI	CACCTGC	1 cut(s)	107
PciI	ACATGT	1 cut(s)	582
PciSI	GCTCTTC	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	1 cut(s)	414
PctI	GAATGC	1 cut(s)	743
PfeI	GAWTC	4 cut(s)	26, 453, 802, 2314
Pfl23II	CGTACG	1 cut(s)	15
PflMI	CCANNNNNTGG	2 cut(s)	291, 2017
PfoI	TCCNGGA	1 cut(s)	1686
PinAI	ACCGGT	1 cut(s)	1215
PkrI	GCNGC	4 cut(s)	225, 1209, 1395, 2153
PleI	GAGTC	5 cut(s)	121, 333, 524, 1113, 1877
PpsI	GAGTC	5 cut(s)	121, 333, 524, 1113, 1877
Ppu21I	YACGTR	1 cut(s)	418
PscI	ACATGT	1 cut(s)	582
Psp6I	CCWGG	3 cut(s)	1171, 1686, 1994
PspGI	CCWGG	3 cut(s)	1171, 1686, 1994
PspLI	CGTACG	1 cut(s)	15
PspN4I	GGNNCC	1 cut(s)	449
PspPI	GGNCC	3 cut(s)	448, 1579, 2162
PstNI	CAGNNNCTG	2 cut(s)	811, 1829
PsuI	RGATCY	4 cut(s)	87, 1181, 1339, 1542
RruI	TCGCGA	1 cut(s)	1677
RsaI	GTAC	6 cut(s)	17, 58, 1046, 1214, 1935, 2402
RsaNI	GTAC	6 cut(s)	16, 57, 1045, 1213, 1934, 2401
RseI	CAYNNNNRTG	1 cut(s)	1074
SapI	GCTCTTC	1 cut(s)	197
SaqAI	TTAA	9 cut(s)	522, 537, 666, 729, 753, 888, 942, 1263, 1586
SatI	GCNGC	4 cut(s)	224, 1208, 1394, 2152
Sau3AI	GATC	9 cut(s)	87, 394, 980, 1181, 1339, 1361, 1510, 1542, 1625
Sau96I	GGNCC	3 cut(s)	448, 1579, 2162
ScaI	AGTACT	1 cut(s)	1046
SchI	GAGTC	5 cut(s)	122, 333, 524, 1114, 1877
ScrFI	CCNGG	7 cut(s)	482, 1011, 1012, 1125, 1173, 1688, 1996
SexAI	ACCWGGT	1 cut(s)	1171
SfaNI	GCATC	4 cut(s)	196, 1126, 1629, 1708
SinI	GGWCC	2 cut(s)	448, 1579
SmaI	CCCGGG	1 cut(s)	1012
SmiMI	CAYNNNNRTG	1 cut(s)	1074
SmlI	CTYRAG	1 cut(s)	1398
SmoI	CTYRAG	1 cut(s)	1398
SspI	AATATT	2 cut(s)	578, 1986
SspMI	CTAG	3 cut(s)	308, 711, 1838
StyD4I	CCNGG	7 cut(s)	480, 1009, 1010, 1123, 1171, 1686, 1994
StyI	CCWWGG	2 cut(s)	1310, 1464
TaaI	ACNGT	8 cut(s)	304, 821, 1351, 1406, 1460, 1797, 1927, 1938
TaiI	ACGT	5 cut(s)	21, 215, 324, 420, 1235
TaqI	TCGA	6 cut(s)	24, 111, 201, 1259, 1637, 2183
TaqII	GACCGA	1 cut(s)	850
TatI	WGTACW	1 cut(s)	1044
TauI	GCSGC	2 cut(s)	226, 1210
TfiI	GAWTC	4 cut(s)	26, 453, 802, 2314
Tru1I	TTAA	9 cut(s)	522, 537, 666, 729, 753, 888, 942, 1263, 1586
Tru9I	TTAA	9 cut(s)	522, 537, 666, 729, 753, 888, 942, 1263, 1586
TscAI	CASTG	6 cut(s)	1254, 1513, 1777, 1880, 2238, 2283
TseFI	GTSAC	2 cut(s)	1663, 2039
TseI	GCWGC	2 cut(s)	1393, 2151
Tsp45I	GTSAC	2 cut(s)	1663, 2039
TspGWI	ACGGA	2 cut(s)	1374, 2231
TspMI	CCCGGG	1 cut(s)	1010
TspRI	CASTG	6 cut(s)	1254, 1513, 1777, 1880, 2238, 2283
Van91I	CCANNNNNTGG	2 cut(s)	291, 2017
VpaK11BI	GGWCC	2 cut(s)	448, 1579
XapI	RAATTY	2 cut(s)	668, 1051
XceI	RCATGY	1 cut(s)	586
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1573
XmaI	CCCGGG	1 cut(s)	1010
XmiI	GTMKAC	1 cut(s)	2372
XspI	CTAG	3 cut(s)	308, 711, 1838
ZrmI	AGTACT	1 cut(s)	1046
Zsp2I	ATGCAT	2 cut(s)	769, 1476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.