Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005128

Physical Location & Seq

Genomic Coordinates Forward (+)

49269252 .. 49273026

Gene Structure 3775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003498

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGCTCCCGCACTCGTACACCGTCGATTCCCTCTCCAAATCCCAAGACCTCGCCAGCACCATCCTCGCTTCCTCCGCGCCGCACCAGATCTCCTCCGCCTGCGACTCCGTCCACTCCTTCCTCCACTCCCTCCCACCCGACCACTCCCGCCACTTCTTCTCCCTCACCTTCCCCACCCTCATCTGCAAGCTCTTCGGCTTCGACGACGCCACGTCATCGTCTTCATCCTCCTCCTCCTCCTCTTCCTCTCCCTCATCTCCCTCCCACGGCTGGATCGACACCGTCCTCGCCTCAAACGACGTCGAATTGGCCAACAAGCTCTTCTCCCTCCTCGCCCCGACCGGCCTCCTCTTCACCTCAATCTCCGCCGTCGATCGCCTCTCCCTCGTCAAGTACGTCTTCCCCATCGAACGGCTCCCGGAATGGGTGCGGTTCATGCTCTCCTCGGAGAAAGATAGCCGGGCGCTCTCCGATTTAGCTCCGGTTTTCAAGAACAGGATTAAAGAAGGTTCGATTCAGCCTAATTTCCATCAGGTTCAGCTCAATGTGTTTGAATATTACATCTTCTGGTTTGCTTATTATCCTGTTTGCCGCGGAAATGGTGAGAATTGCGATACTGTTTCGGTTAGGAGGAACAAAAGATTCAAATTTGAGAATTGGGTTTCGTCAATTTCGGGGTTTTCGAGCCCTAGGCGTGGTGGCTCGGAGCTTAAAATCGAGTGTAGTCTTTATATCAGGCTTTTATATGCTTATCTTAATGCATTTGTGGCTGTGACTGATTTGAATTCGCACCTGCCGTACCGGAGTTCGCTTCTGCAGTACTCTGCCGGGTATGATAGCGCGGCCATAGTGAAGGGGGAGTTTTTGGTTAATGCGTTGGTCAATTTTTGGTTACTTGATAATGATTTTTCGCCACTATCTGCCGATTTGTGTAAGTCTTTTGGAGTTAAGTTTCCGTTGCGGTCGGTTTTAGGAGAGACCCCGCCAACGCCTGGATTAGGAGAGGTGGTGAAGTTGCTTGTCAAGTACTTGAATTTGGGTTTGGTGGTGCACCAGAATGGGACGGATAATGTGGATTATGGTGCGAGTCCGAGGTGGAGAATGTCGGGTTCGTTTGATGTTGGGAAGCCAATGGATGCAATGGCAGTGTCTCCCGCTGTGCTTCCAAATGGGTCCTGGAACTTGCTGATACAGAGGCCTTTGTACAGGTTTATATTGAGGACATTCTTGTTCTGCCCGGTGGGAGCTTCAATTAAGAACATTTCACAAGTTTTTTCGGTTTGGGTTACTTACTTGGAACCTTGGGCTATCAGTTTGGATGACTTTGGGGAGCTTGATGCTATTGTTGATGGATCAACTAAGAATGGGAGAAAGGATCACTCGCAGTCTGAAGCCTGTGGTTATTCACCTTCTTGGGAGGCTTATGTGTTGTTGAATTACCTGTACTACAGTTCCTTGGTTATGCATTTTATTGGGTTTGCACACAAGTTTCTTCACACTGATGCAGAAATAATAGTCCAGATGGTATCGAAGGTTCTAACTATATTGACATCATCCAAAGATCTACTTGATCTTATAAAGATGATGGATATTGCTTTTCACTCCAAACAAGCAGGATCAGGCAAATCGAGGCTTAATAGCTTATATAGATTTGTGACTCCAATTTGTGAGCAGTTGAAGGACCGGGAAGATGGCTTATGTGAAAGTGATGCTGATGGGTCTTTCTTGCATGATAATTGGAACAAAGATTTACGTCTGTTTTGTGATGGAGAAGATGGTGGGCGACAACTGCTTCAGTTGTTCATTTTACGTGCAGAAGCCGAGTTGCAAGCAATTGCTGGTGATAACCTTGCTGAAAACCTTCAGTGCATAGACTCTTTAAAAGATCAGGTGGCCTGCTTGTTTGGTAGTGATGCTGTAAGGAAACTATCATTTTCCCCAGAAGCAAAACAGCCCGCTCAACCCCGTGATGAAATTTTCAAACCCAGGAGAGTTGGCAACTATGCTTTGTCTGATATCAAATACAAGGGTGACTGGATGAAGCGTCCCATCTCTGATGATGAGGTTGCCTGGCTTGCGAAACTGCTTGTCCTGTTTTCTTGCTGGCTAAATGAGATTCTCGGACTAAATCAGACTGAAAGCAACCAAGTGGGTTCAACACATTCTTACGTTAAGGTACCTTCAAGTGATGTTTCGGGTGTTAAGGCAGTGTTGGGTGCTGTTGGCTCTTGGATTCTCATGTTGGGTGTGGGGGTGGTAAGGCTTGTGAGAAAACGTGGTCTGAGAGTGAACCTCAGGATGTTGGCCTCAAAGAAGGTTGTAATGATCTTGCTCTTGTCTGTTGTATATATTGTATTAAAGAGCTTTTGGACTGTTTCATATGGTAGGGTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

mit_SMPDase

Protein Analysis

799

Amino Acids

88.88

Weight (kDa)

7.54

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47400
fragaria_vesca	FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410
malus_domestica	MD04G1060300.v1.1 MD06G1053300.v1.1
prunus_persica	Prupe.5G065400_v2.0.a1
pyrus_communis	pycom04g05390 pycom06g04500
rosa_chinensis	RchiOBHm_Chr7g0203921
rosa_laevigata	RLG00000003498
rosa_multiflora	Rmu_co8411937.1_g000001 Rmu_sc0013871.1_g000002 Rmu_sc0032022.1_g000002
rosa_roxburghii	Rroxscaffold_3G00253460
rosa_rugosa	Rorug07G0079400
rosa_samantha	Rh7AG209300 Rh7BG208100 Rh7CG221700 Rh7DG216400
rosa_wichuraiana	Rw7G018240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1577
AarI	CACCTGC	1 cut(s)	801
AatII	GACGTC	1 cut(s)	303
Acc36I	ACCTGC	1 cut(s)	801
Acc65I	GGTACC	1 cut(s)	2176
AccB1I	GGYRCC	1 cut(s)	2176
AccB7I	CCANNNNNTGG	1 cut(s)	992
AccBSI	CCGCTC	1 cut(s)	1958
AccII	CGCG	3 cut(s)	77, 594, 842
AclWI	GGATC	4 cut(s)	281, 1360, 1383, 1624
AcoI	YGGCCR	2 cut(s)	309, 843
AcsI	RAATTY	4 cut(s)	647, 784, 1033, 1974
AcuI	CTGAAG	3 cut(s)	1410, 1778, 1847
AcyI	GRCGYC	2 cut(s)	207, 300
AfaI	GTAC	8 cut(s)	17, 395, 800, 821, 1028, 1205, 1445, 2178
AfiI	CCNNNNNNNGG	7 cut(s)	266, 270, 411, 424, 695, 992, 998
AhdI	GACNNNNNGTC	1 cut(s)	211
AjiI	CACGTC	1 cut(s)	213
AjnI	CCWGG	4 cut(s)	991, 1175, 1985, 2069
AjuI	GAANNNNNNNTTGG	4 cut(s)	305, 337, 1025, 1057
AluBI	AGCT	9 cut(s)	190, 319, 479, 541, 709, 1247, 1333, 1641, 2364
AluI	AGCT	9 cut(s)	190, 319, 479, 541, 709, 1247, 1333, 1641, 2364
Alw21I	GWGCWC	1 cut(s)	1053
Alw26I	GTCTC	2 cut(s)	971, 1155
Alw44I	GTGCAC	1 cut(s)	1049
AlwI	GGATC	4 cut(s)	281, 1360, 1383, 1624
AoxI	GGCC	6 cut(s)	309, 343, 843, 1196, 1893, 2304
ApaLI	GTGCAC	1 cut(s)	1049
ApoI	RAATTY	4 cut(s)	647, 784, 1033, 1974
Asp700I	GAANNNNTTC	1 cut(s)	1860
Asp718I	GGTACC	1 cut(s)	2176
AspA2I	CCTAGG	1 cut(s)	689
AspLEI	GCGC	3 cut(s)	79, 466, 842
AspS9I	GGNCC	2 cut(s)	1173, 1681
AsuC2I	CCSGG	5 cut(s)	419, 461, 829, 1238, 1685
AsuHPI	GGTGA	7 cut(s)	157, 346, 614, 1021, 1398, 1853, 2042
AvaII	GGWCC	2 cut(s)	1173, 1681
AvrII	CCTAGG	1 cut(s)	689
AxyI	CCTNAGG	1 cut(s)	2294
BaeGI	GKGCMC	1 cut(s)	1053
BalI	TGGCCA	1 cut(s)	311
BanI	GGYRCC	1 cut(s)	2176
BanII	GRGCYC	1 cut(s)	689
BbsI	GAAGAC	2 cut(s)	213, 391
Bbv12I	GWGCWC	1 cut(s)	1053
BceAI	ACGGC	4 cut(s)	283, 353, 428, 781
BcgI	CGANNNNNNTGC	4 cut(s)	46, 80, 175, 209
BciT130I	CCWGG	4 cut(s)	993, 1177, 1987, 2071
BcnI	CCSGG	5 cut(s)	419, 461, 829, 1238, 1685
BcoDI	GTCTC	2 cut(s)	971, 1155
BfaI	CTAG	1 cut(s)	690
BfmI	CTRYAG	2 cut(s)	815, 1447
BfoI	RGCGCY	1 cut(s)	467
BfuAI	ACCTGC	1 cut(s)	801
BglII	AGATCT	2 cut(s)	87, 1561
BisI	GCNGC	3 cut(s)	80, 592, 843
BlnI	CCTAGG	1 cut(s)	689
BlsI	GCNGC	3 cut(s)	81, 593, 844
BmcAI	AGTACT	2 cut(s)	821, 1028
Bme1390I	CCNGG	9 cut(s)	419, 461, 829, 993, 1177, 1238, 1685, 1987, 2071
Bme18I	GGWCC	2 cut(s)	1173, 1681
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmgBI	CACGTC	1 cut(s)	213
BmgT120I	GGNCC	2 cut(s)	1173, 1681
BmiI	GGNNCC	4 cut(s)	416, 1174, 1299, 2178
BmrFI	CCNGG	9 cut(s)	419, 461, 829, 993, 1177, 1238, 1685, 1987, 2071
BmsI	GCATC	5 cut(s)	1126, 1327, 1492, 1699, 1903
BpiI	GAAGAC	2 cut(s)	213, 391
BplI	GAGNNNNNCTC	2 cut(s)	2277, 2309
BpuMI	CCSGG	5 cut(s)	419, 461, 829, 1238, 1685
BsaAI	YACGTR	1 cut(s)	1811
BsaHI	GRCGYC	2 cut(s)	207, 300
BsaI	GGTCTC	1 cut(s)	971
BsaJI	CCNNGG	8 cut(s)	265, 444, 592, 689, 1091, 1301, 1455, 1985
BsaWI	WCCGGW	2 cut(s)	481, 801
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 143, 173, 993, 1023
Bsc4I	CCNNNNNNNGG	7 cut(s)	266, 270, 411, 424, 695, 992, 998
Bse118I	RCCGGY	1 cut(s)	341
Bse1I	ACTGG	1 cut(s)	2039
Bse21I	CCTNAGG	1 cut(s)	2294
Bse3DI	GCAATG	1 cut(s)	1146
BseBI	CCWGG	4 cut(s)	993, 1177, 1987, 2071
BseDI	CCNNGG	8 cut(s)	265, 444, 592, 689, 1091, 1301, 1455, 1985
BseGI	GGATG	7 cut(s)	60, 224, 1141, 1324, 1553, 2043, 2304
BseLI	CCNNNNNNNGG	7 cut(s)	266, 270, 411, 424, 695, 992, 998
BseMI	GCAATG	1 cut(s)	1146
BseMII	CTCAG	2 cut(s)	2273, 2308
BseNI	ACTGG	1 cut(s)	2039
BseRI	GAGGAG	8 cut(s)	82, 220, 223, 226, 229, 320, 338, 433
BseSI	GKGCMC	1 cut(s)	1053
BsgI	GTGCAG	1 cut(s)	1833
Bsh1236I	CGCG	3 cut(s)	77, 594, 842
Bsh1285I	CGRYCG	3 cut(s)	342, 376, 965
BshFI	GGCC	6 cut(s)	311, 345, 845, 1198, 1895, 2306
BshNI	GGYRCC	1 cut(s)	2176
BsiEI	CGRYCG	3 cut(s)	342, 376, 965
BsiHKAI	GWGCWC	1 cut(s)	1053
BsiSI	CCGG	8 cut(s)	342, 419, 460, 482, 802, 828, 1238, 1684
BslFI	GGGAC	2 cut(s)	1075, 2031
BslI	CCNNNNNNNGG	7 cut(s)	266, 270, 411, 424, 695, 992, 998
BsmAI	GTCTC	2 cut(s)	971, 1155
BsmFI	GGGAC	2 cut(s)	1075, 2031
BsnI	GGCC	6 cut(s)	311, 345, 845, 1198, 1895, 2306
Bso31I	GGTCTC	1 cut(s)	971
Bsp1286I	GDGCHC	2 cut(s)	689, 1053
Bsp1407I	TGTACA	1 cut(s)	1203
BspANI	GGCC	6 cut(s)	311, 345, 845, 1198, 1895, 2306
BspCNI	CTCAG	2 cut(s)	2274, 2307
BspFNI	CGCG	3 cut(s)	77, 594, 842
BspLI	GGNNCC	4 cut(s)	416, 1174, 1299, 2178
BspMAI	CTGCAG	1 cut(s)	819
BspMI	ACCTGC	1 cut(s)	801
BspPI	GGATC	4 cut(s)	281, 1360, 1383, 1624
BspQI	GCTCTTC	2 cut(s)	197, 326
BspT107I	GGYRCC	1 cut(s)	2176
BspTNI	GGTCTC	1 cut(s)	971
BsrBI	CCGCTC	1 cut(s)	1958
BsrDI	GCAATG	1 cut(s)	1146
BsrFI	RCCGGY	1 cut(s)	341
BsrGI	TGTACA	1 cut(s)	1203
BsrI	ACTGG	1 cut(s)	2039
BssAI	RCCGGY	1 cut(s)	341
BssECI	CCNNGG	8 cut(s)	265, 444, 592, 689, 1091, 1301, 1455, 1985
BssNI	GRCGYC	2 cut(s)	207, 300
BssT1I	CCWWGG	3 cut(s)	689, 1301, 1455
Bst2UI	CCWGG	4 cut(s)	993, 1177, 1987, 2071
Bst4CI	ACNGT	5 cut(s)	22, 283, 619, 1451, 2374
Bst6I	CTCTTC	4 cut(s)	197, 247, 326, 356
BstACI	GRCGYC	2 cut(s)	207, 300
BstAUI	TGTACA	1 cut(s)	1203
BstBAI	YACGTR	1 cut(s)	1811
BstC8I	GCNNGC	8 cut(s)	55, 100, 188, 1830, 1897, 1956, 2076, 2105
BstDEI	CTNAG	3 cut(s)	1359, 2282, 2294
BstDSI	CCRYGG	2 cut(s)	265, 592
BstENI	CCTNNNNNAGG	1 cut(s)	996
BstF5I	GGATG	7 cut(s)	60, 224, 1141, 1324, 1553, 2043, 2304
BstFNI	CGCG	3 cut(s)	77, 594, 842
BstH2I	RGCGCY	1 cut(s)	467
BstHHI	GCGC	3 cut(s)	79, 466, 842
BstMAI	GTCTC	2 cut(s)	971, 1155
BstMCI	CGRYCG	3 cut(s)	342, 376, 965
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 436, 767, 1789, 2075
BstNI	CCWGG	4 cut(s)	993, 1177, 1987, 2071
BstSCI	CCNGG	9 cut(s)	417, 459, 827, 991, 1175, 1236, 1683, 1985, 2069
BstSFI	CTRYAG	2 cut(s)	815, 1447
BstSLI	GKGCMC	1 cut(s)	1053
BstUI	CGCG	3 cut(s)	77, 594, 842
BstV2I	GAAGAC	2 cut(s)	213, 391
BstX2I	RGATCY	2 cut(s)	87, 1561
BstYI	RGATCY	2 cut(s)	87, 1561
Bsu36I	CCTNAGG	1 cut(s)	2294
BsuRI	GGCC	6 cut(s)	311, 345, 845, 1198, 1895, 2306
BtgI	CCRYGG	2 cut(s)	265, 592
BtrI	CACGTC	1 cut(s)	213
BtsCI	GGATG	7 cut(s)	60, 224, 1141, 1324, 1553, 2043, 2304
BtsI	GCAGTG	2 cut(s)	1152, 2214
BtsIMutI	CAGTG	4 cut(s)	1152, 1497, 1871, 2214
BveI	ACCTGC	1 cut(s)	801
Cac8I	GCNNGC	8 cut(s)	55, 100, 188, 1830, 1897, 1956, 2076, 2105
CfoI	GCGC	3 cut(s)	79, 466, 842
Cfr10I	RCCGGY	1 cut(s)	341
Cfr13I	GGNCC	2 cut(s)	1173, 1681
Cfr42I	CCGCGG	1 cut(s)	595
CseI	GACGC	2 cut(s)	215, 2033
Csp6I	GTAC	8 cut(s)	16, 394, 799, 820, 1027, 1204, 1444, 2177
CviAII	CATG	3 cut(s)	436, 1730, 2239
CviQI	GTAC	8 cut(s)	16, 394, 799, 820, 1027, 1204, 1444, 2177
DdeI	CTNAG	3 cut(s)	1359, 2282, 2294
DraI	TTTAAA	1 cut(s)	1881
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	2 cut(s)	309, 843
Eam1104I	CTCTTC	4 cut(s)	197, 247, 326, 356
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EarI	CTCTTC	4 cut(s)	197, 247, 326, 356
EciI	GGCGGA	2 cut(s)	85, 355
Eco130I	CCWWGG	3 cut(s)	689, 1301, 1455
Eco147I	AGGCCT	1 cut(s)	1198
Eco24I	GRGCYC	1 cut(s)	689
Eco31I	GGTCTC	1 cut(s)	971
Eco32I	GATATC	1 cut(s)	2017
Eco47I	GGWCC	2 cut(s)	1173, 1681
Eco57I	CTGAAG	3 cut(s)	1410, 1778, 1847
Eco81I	CCTNAGG	1 cut(s)	2294
EcoNI	CCTNNNNNAGG	1 cut(s)	996
EcoO109I	RGGNCCY	1 cut(s)	1173
EcoRI	GAATTC	1 cut(s)	784
EcoRII	CCWGG	4 cut(s)	991, 1175, 1985, 2069
EcoRV	GATATC	1 cut(s)	2017
EcoT14I	CCWWGG	3 cut(s)	689, 1301, 1455
EcoT22I	ATGCAT	2 cut(s)	763, 1467
EcoT38I	GRGCYC	1 cut(s)	689
ErhI	CCWWGG	3 cut(s)	689, 1301, 1455
FaeI	CATG	3 cut(s)	439, 1733, 2242
FalI	AAGNNNNNCTT	4 cut(s)	383, 415, 1551, 1583
FaqI	GGGAC	2 cut(s)	1075, 2031
FatI	CATG	3 cut(s)	435, 1729, 2238
FauI	CCCGC	5 cut(s)	15, 155, 990, 1162, 1963
FauNDI	CATATG	1 cut(s)	2380
Fnu4HI	GCNGC	3 cut(s)	80, 592, 843
FokI	GGATG	7 cut(s)	47, 211, 1148, 1331, 1540, 2050, 2311
FriOI	GRGCYC	1 cut(s)	689
Fsp4HI	GCNGC	3 cut(s)	80, 592, 843
FspBI	CTAG	1 cut(s)	690
GlaI	GCGC	3 cut(s)	78, 465, 841
GluI	GCNGC	3 cut(s)	80, 592, 843
HaeII	RGCGCY	1 cut(s)	467
HaeIII	GGCC	6 cut(s)	311, 345, 845, 1198, 1895, 2306
HapII	CCGG	8 cut(s)	342, 419, 460, 482, 802, 828, 1238, 1684
HgaI	GACGC	2 cut(s)	215, 2033
HhaI	GCGC	3 cut(s)	79, 466, 842
Hin1I	GRCGYC	2 cut(s)	207, 300
Hin1II	CATG	3 cut(s)	439, 1733, 2242
Hin6I	GCGC	3 cut(s)	77, 464, 840
HinP1I	GCGC	3 cut(s)	77, 464, 840
HinfI	GANTC	9 cut(s)	26, 104, 514, 642, 1087, 1657, 1874, 2116, 2233
HpaII	CCGG	8 cut(s)	342, 419, 460, 482, 802, 828, 1238, 1684
HphI	GGTGA	7 cut(s)	157, 346, 614, 1021, 1398, 1853, 2042
Hpy166II	GTNNAC	4 cut(s)	18, 112, 1051, 2290
Hpy188III	TCNNGA	3 cut(s)	490, 1519, 2296
Hpy8I	GTNNAC	4 cut(s)	18, 112, 1051, 2290
Hpy99I	CGWCG	6 cut(s)	26, 206, 209, 302, 305, 374
HpyCH4III	ACNGT	5 cut(s)	22, 283, 619, 1451, 2374
HpyCH4IV	ACGT	7 cut(s)	212, 300, 396, 1753, 1810, 2169, 2275
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 436, 767, 1789, 2075
HpyF3I	CTNAG	3 cut(s)	1359, 2282, 2294
HpySE526I	ACGT	7 cut(s)	212, 300, 396, 1753, 1810, 2169, 2275
Hsp92I	GRCGYC	2 cut(s)	207, 300
Hsp92II	CATG	3 cut(s)	439, 1733, 2242
HspAI	GCGC	3 cut(s)	77, 464, 840
KpnI	GGTACC	1 cut(s)	2180
KspI	CCGCGG	1 cut(s)	595
LguI	GCTCTTC	2 cut(s)	197, 326
LmnI	GCTCC	6 cut(s)	9, 420, 484, 706, 1244, 1330
LweI	GCATC	5 cut(s)	1126, 1327, 1492, 1699, 1903
MaeI	CTAG	1 cut(s)	690
MaeII	ACGT	7 cut(s)	212, 300, 396, 1753, 1810, 2169, 2275
MaeIII	GTNAC	5 cut(s)	772, 891, 1285, 1654, 2030
MbiI	CCGCTC	1 cut(s)	1958
MfeI	CAATTG	1 cut(s)	1833
MflI	RGATCY	2 cut(s)	87, 1561
MhlI	GDGCHC	2 cut(s)	689, 1053
MlsI	TGGCCA	1 cut(s)	311
MluNI	TGGCCA	1 cut(s)	311
MlyI	GAGTC	4 cut(s)	98, 1096, 1651, 1868
Mox20I	TGGCCA	1 cut(s)	311
Mph1103I	ATGCAT	2 cut(s)	763, 1467
MroXI	GAANNNNTTC	1 cut(s)	1860
MscI	TGGCCA	1 cut(s)	311
MslI	CAYNNNNRTG	2 cut(s)	1056, 1500
Msp20I	TGGCCA	1 cut(s)	311
MspA1I	CMGCKG	2 cut(s)	594, 1157
MspI	CCGG	8 cut(s)	342, 419, 460, 482, 802, 828, 1238, 1684
MspR9I	CCNGG	9 cut(s)	419, 461, 829, 993, 1177, 1238, 1685, 1987, 2071
MunI	CAATTG	1 cut(s)	1833
MvaI	CCWGG	4 cut(s)	993, 1177, 1987, 2071
MvnI	CGCG	3 cut(s)	77, 594, 842
MwoI	GCNNNNNNNGC	5 cut(s)	74, 436, 767, 1789, 2075
NciI	CCSGG	5 cut(s)	419, 461, 829, 1238, 1685
NdeI	CATATG	1 cut(s)	2380
NlaIII	CATG	3 cut(s)	439, 1733, 2242
NlaIV	GGNNCC	4 cut(s)	416, 1174, 1299, 2178
NmeAIII	GCCGAG	1 cut(s)	1846
NmuCI	GTSAC	3 cut(s)	772, 1654, 2030
NsiI	ATGCAT	2 cut(s)	763, 1467
PaqCI	CACCTGC	1 cut(s)	801
PceI	AGGCCT	1 cut(s)	1198
PciSI	GCTCTTC	2 cut(s)	197, 326
PcsI	WCGNNNNNNNCGW	6 cut(s)	201, 273, 294, 393, 680, 794
PdmI	GAANNNNTTC	1 cut(s)	1860
PfeI	GAWTC	5 cut(s)	26, 514, 642, 2116, 2233
PflFI	GACNNNGTC	2 cut(s)	107, 281
PflMI	CCANNNNNTGG	1 cut(s)	992
PfoI	TCCNGGA	2 cut(s)	417, 1175
PkrI	GCNGC	3 cut(s)	81, 593, 844
Ple19I	CGATCG	1 cut(s)	376
PleI	GAGTC	4 cut(s)	98, 1095, 1651, 1868
PpsI	GAGTC	4 cut(s)	98, 1095, 1651, 1868
Ppu21I	YACGTR	1 cut(s)	1811
PpuMI	RGGWCCY	1 cut(s)	1173
PsiI	TTATAA	1 cut(s)	1577
Psp5II	RGGWCCY	1 cut(s)	1173
Psp6I	CCWGG	4 cut(s)	991, 1175, 1985, 2069
PspGI	CCWGG	4 cut(s)	991, 1175, 1985, 2069
PspN4I	GGNNCC	4 cut(s)	416, 1174, 1299, 2178
PspPI	GGNCC	2 cut(s)	1173, 1681
PspPPI	RGGWCCY	1 cut(s)	1173
PsrI	GAACNNNNNNTAC	2 cut(s)	1518, 1550
PstI	CTGCAG	1 cut(s)	819
PsuI	RGATCY	2 cut(s)	87, 1561
PsyI	GACNNNGTC	2 cut(s)	107, 281
PvuI	CGATCG	1 cut(s)	376
RsaI	GTAC	8 cut(s)	17, 395, 800, 821, 1028, 1205, 1445, 2178
RsaNI	GTAC	8 cut(s)	16, 394, 799, 820, 1027, 1204, 1444, 2177
RseI	CAYNNNNRTG	2 cut(s)	1056, 1500
SacII	CCGCGG	1 cut(s)	595
SapI	GCTCTTC	2 cut(s)	197, 326
SatI	GCNGC	3 cut(s)	80, 592, 843
Sau96I	GGNCC	2 cut(s)	1173, 1681
ScaI	AGTACT	2 cut(s)	821, 1028
SchI	GAGTC	4 cut(s)	98, 1096, 1651, 1868
ScrFI	CCNGG	9 cut(s)	419, 461, 829, 993, 1177, 1238, 1685, 1987, 2071
SduI	GDGCHC	2 cut(s)	689, 1053
SfaNI	GCATC	5 cut(s)	1126, 1327, 1492, 1699, 1903
SfcI	CTRYAG	2 cut(s)	815, 1447
Sfr303I	CCGCGG	1 cut(s)	595
SgrBI	CCGCGG	1 cut(s)	595
SinI	GGWCC	2 cut(s)	1173, 1681
SmiMI	CAYNNNNRTG	2 cut(s)	1056, 1500
SseBI	AGGCCT	1 cut(s)	1198
SspI	AATATT	1 cut(s)	557
SspMI	CTAG	1 cut(s)	690
StuI	AGGCCT	1 cut(s)	1198
StyD4I	CCNGG	9 cut(s)	417, 459, 827, 991, 1175, 1236, 1683, 1985, 2069
StyI	CCWWGG	3 cut(s)	689, 1301, 1455
TaaI	ACNGT	5 cut(s)	22, 283, 619, 1451, 2374
TaiI	ACGT	7 cut(s)	215, 303, 399, 1756, 1813, 2172, 2278
TatI	WGTACW	4 cut(s)	819, 1026, 1203, 1443
TauI	GCSGC	3 cut(s)	82, 594, 845
TfiI	GAWTC	5 cut(s)	26, 514, 642, 2116, 2233
TscAI	CASTG	4 cut(s)	1152, 1504, 1871, 2214
TseFI	GTSAC	3 cut(s)	772, 1654, 2030
Tsp45I	GTSAC	3 cut(s)	772, 1654, 2030
TspDTI	ATGAA	6 cut(s)	213, 424, 1792, 1986, 2054, 2367
TspGWI	ACGGA	3 cut(s)	97, 945, 1079
TspRI	CASTG	4 cut(s)	1152, 1504, 1871, 2214
Tth111I	GACNNNGTC	2 cut(s)	107, 281
Van91I	CCANNNNNTGG	1 cut(s)	992
VneI	GTGCAC	1 cut(s)	1049
VpaK11BI	GGWCC	2 cut(s)	1173, 1681
XagI	CCTNNNNNAGG	1 cut(s)	996
XapI	RAATTY	4 cut(s)	647, 784, 1033, 1974
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1173
XmaJI	CCTAGG	1 cut(s)	689
XmnI	GAANNNNTTC	1 cut(s)	1860
XspI	CTAG	1 cut(s)	690
ZraI	GACGTC	1 cut(s)	301
ZrmI	AGTACT	2 cut(s)	821, 1028
Zsp2I	ATGCAT	2 cut(s)	763, 1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.