Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0005128

Physical Location & Seq

Genomic Coordinates Reverse (-)

20865693 .. 20870218

Gene Structure 4526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG216400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGCTCCCGCACTCCTACACCGTCGATTCCCTCTCCAAATCCCAAGACCTCGCCAGCACCATCCTCTCCTCCTCCGCGCCGCACCAGATCTCCTCCGCCTGCGACTCCGTCCGCTCCTTCCTCCACTCCCTCCCTCCCGACCACGCCCGCCACTTCTTCTCCCTCACCTTCCCCACCCTCATCTGCAAGCTCTTCGGCTTCGACGACGCCACGTCATCTTCGTCATCCTCTCCCTCCCACGGCTGGATCGACACCGTCCTCGCCTCAAACGACGTCGAATTGGCCAACAAGCTCTTCTCCCTCCTCGCCCCGACCGGCCTCCTCTTCACCTCAATCTCCGCCGTCGATCGCCTCTCCCTCGTCAAGTACGTCTTCCCCATCGAACGGCTCCCGGAATGGGTGCGGTTCATGCTCTCCTCGGAGAAAGATAGCCGGGCGCTCTCCGATTTAGCTCCGGTTTTCAAGAACAGGGTTAAGGAAGATTCGATTCAGCCTAATTTCCATCAGGTTCAGCTCAATGTGTTTGAATATTACATCTTCTGGTTCGCTTATTATCCTGTTTGCCGCGGAAATGGTGAGAATTGCGATACTGTTTCGGTTAGGAGGAACAAAAGATTCAAATTTGAGAATTGGGTTTCGTCAATTTCGGGGTTTTCGAGCCCTAGGCGTGGTGGCTCGGAGCCTAAAATCGAGTGTAATCTTTATATCAGGCTTTTATATGCTTATCTTAATGCATTTGTGGCTCTGACTGATTTGAATTCGCACCTGCCGTACCGGAGTTCGCTTTTGCAGTACTCTGCCGGGTATGATAGCTCGGCCATAGTGAAGGGGGAGTTTTTGGTTAATGCGTTGGTCAATTTTTGGTTACTTGATAATGATTTTTCGCCACTATCTGCCGATTTGTGTAAGTCTTTTGGAGTTAAGTTTCCGTTGCGGTCGGTTTTAGGAGAGACCCCGCCAGCGCCTGGATTAGGAGAGGTGGTGAAGTTGCTTATCAAGTACTTGAATTTGGGTTTGGTGGTGCACCAGAATGGGACGGATAATGTGGAATATGGTGTGAGTCCGAGGTGGAGAATGTCGGGTTCATTTGATGTTGGGAAGCCAATGGATGTAATGGCAGTGTCTCCCGGTGTGCTTCCAAATGGGTCTTGGAACTTGCTGATACAGAGGCCTTTGTACAGGTTTATATTGAGGACATTCTTGTTCTGCCCGGTGGGAGCTTCAATTAAGAACATTTCACAAGTTTTTTCGGTTTGGGTTACTTACTTGGAACCTTGGGGTATTAGTTTGGATGACTTTGGGGAGCTTGATGCTATTGTTGATGGATCAAATAAGAATGGGAGAAAGGATCACTCGCAGTCTGAAGCATGTGGTTATTCACCTTCTTGGGAGGCTTATGTGTTGGCGAATTACTTGTACTACAGTTCCTTGGTTATGCATTTTATTGGGTTTGCACACAAGTTTCTTCACACTGATGCAGAAATAATAGTCCAGATGGTATCGAAGGTTCTAACTATATTGACATCATCCAAAGATCTACTTGATCTTATAAAGACAATGGATATTGCTTTTCACTCCAAACAAGCAGGATCAGGCAAATCAAGGCTTAATAGCTTATATAGATTTGTGACTCCAATTTGTGAGCAGTTGAAGGACTGGGAAGATGGCTTATGTGAAAGTGATGCTGATGGGTCTTTCTTGCATGATAATTGGAACAAAGATTTACGTCTGTTTAGTGATGGAGAAGATGGTGGGCGACAACTGCTTCAGTTGTTCATATTACGTGCAGAAGCCGAGTTGCAAGCAATTTCTGGTGATAACCTTGCTGAAAACCTTCAGTGCATAGACTCTTTAAAAGATCAGGTGGCCTGCTTGTTTGGCAGTGACGCTGTAAGGAAACTATCATTTTCCCCAGAAGCAAAACAGCCCGCTCAACCCCGTGATGAAATTTTCAAACCCAGGAGAGTTGGCAACTATGCTTTGTCTGATATCAAATACAAGGGTGACTGGATGAAGCGTCCCATCTCTGATGATGAGGTTGCATGGCTTGCGAAACTGCTTGTCCTGTTTTCTTGCTGGCTAAATGAGATTCTCGGACTAAATCAGACTGAAAGCAACCAAGTGGGTTCAACACATTCTTACGTTAAGGTACCTTCAAGTGATGTTTTGGGCATTAAGGCAGTGTTGGGTGCTGTTGGCTCTTGGATTCTCATGTTGGGTGTGGGGGTGGTAAGGCTTGTGAGAAAACGTGGTCTGAGAGTGAACCTCAGGATGTTGGCCTCAAAGAAGGTTGTAATGATCTTGATCTTGTCTGTTGTATATAGTGTATTAAAGAGCTTTTGGACTGTTTCATATGGTAGAGTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

mit_SMPDase

Protein Analysis

789

Amino Acids

88.2

Weight (kDa)

7.22

Isoelectric Point (pI)

43.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47400
fragaria_vesca	FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410 FvH4_5g19410
malus_domestica	MD04G1060300.v1.1 MD06G1053300.v1.1
prunus_persica	Prupe.5G065400_v2.0.a1
pyrus_communis	pycom04g05390 pycom06g04500
rosa_chinensis	RchiOBHm_Chr7g0203921
rosa_laevigata	RLG00000003498
rosa_multiflora	Rmu_co8411937.1_g000001 Rmu_sc0013871.1_g000002 Rmu_sc0032022.1_g000002
rosa_roxburghii	Rroxscaffold_3G00253460
rosa_rugosa	Rorug07G0079400
rosa_samantha	Rh7AG209300 Rh7BG208100 Rh7CG221700 Rh7DG216400
rosa_wichuraiana	Rw7G018240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1550
AarI	CACCTGC	1 cut(s)	774
AatII	GACGTC	1 cut(s)	276
Acc36I	ACCTGC	1 cut(s)	774
Acc65I	GGTACC	1 cut(s)	2149
AccB1I	GGYRCC	1 cut(s)	2149
AccB7I	CCANNNNNTGG	1 cut(s)	965
AccBSI	CCGCTC	2 cut(s)	114, 1931
AccII	CGCG	2 cut(s)	77, 567
AclWI	GGATC	4 cut(s)	254, 1333, 1356, 1597
AcoI	YGGCCR	2 cut(s)	282, 816
AcsI	RAATTY	4 cut(s)	620, 757, 1006, 1947
AcuI	CTGAAG	3 cut(s)	1383, 1751, 1820
AcyI	GRCGYC	2 cut(s)	207, 273
AfaI	GTAC	7 cut(s)	368, 773, 794, 1001, 1178, 1418, 2151
AfiI	CCNNNNNNNGG	7 cut(s)	239, 243, 384, 397, 668, 965, 971
AhdI	GACNNNNNGTC	1 cut(s)	211
AjiI	CACGTC	1 cut(s)	213
AjnI	CCWGG	2 cut(s)	964, 1958
AjuI	GAANNNNNNNTTGG	4 cut(s)	278, 310, 998, 1030
AluBI	AGCT	9 cut(s)	190, 292, 452, 514, 813, 1220, 1306, 1614, 2337
AluI	AGCT	9 cut(s)	190, 292, 452, 514, 813, 1220, 1306, 1614, 2337
Alw21I	GWGCWC	1 cut(s)	1026
Alw26I	GTCTC	2 cut(s)	944, 1128
Alw44I	GTGCAC	1 cut(s)	1022
AlwI	GGATC	4 cut(s)	254, 1333, 1356, 1597
AlwNI	CAGNNNCTG	1 cut(s)	965
AoxI	GGCC	6 cut(s)	282, 316, 816, 1169, 1866, 2277
ApaLI	GTGCAC	1 cut(s)	1022
ApoI	RAATTY	4 cut(s)	620, 757, 1006, 1947
Asp700I	GAANNNNTTC	1 cut(s)	1833
Asp718I	GGTACC	1 cut(s)	2149
AspA2I	CCTAGG	1 cut(s)	662
AspLEI	GCGC	3 cut(s)	79, 439, 964
AsuC2I	CCSGG	5 cut(s)	392, 434, 802, 1128, 1211
AsuHPI	GGTGA	7 cut(s)	157, 319, 587, 994, 1371, 1826, 2015
AvrII	CCTAGG	1 cut(s)	662
AxyI	CCTNAGG	1 cut(s)	2267
BaeGI	GKGCMC	1 cut(s)	1026
BalI	TGGCCA	1 cut(s)	284
BanI	GGYRCC	1 cut(s)	2149
BanII	GRGCYC	1 cut(s)	662
BbsI	GAAGAC	1 cut(s)	364
Bbv12I	GWGCWC	1 cut(s)	1026
BceAI	ACGGC	4 cut(s)	256, 326, 401, 754
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	2 cut(s)	966, 1960
BcnI	CCSGG	5 cut(s)	392, 434, 802, 1128, 1211
BcoDI	GTCTC	2 cut(s)	944, 1128
BfaI	CTAG	1 cut(s)	663
BfmI	CTRYAG	1 cut(s)	1420
BfoI	RGCGCY	2 cut(s)	440, 965
BfuAI	ACCTGC	1 cut(s)	774
BglII	AGATCT	2 cut(s)	87, 1534
BisI	GCNGC	2 cut(s)	80, 565
BlnI	CCTAGG	1 cut(s)	662
BlsI	GCNGC	2 cut(s)	81, 566
BmcAI	AGTACT	2 cut(s)	794, 1001
Bme1390I	CCNGG	7 cut(s)	392, 434, 802, 966, 1128, 1211, 1960
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmgBI	CACGTC	1 cut(s)	213
BmiI	GGNNCC	4 cut(s)	389, 681, 1272, 2151
BmrFI	CCNGG	7 cut(s)	392, 434, 802, 966, 1128, 1211, 1960
BmrI	ACTGGG	1 cut(s)	1666
BmsI	GCATC	3 cut(s)	1300, 1465, 1672
BmuI	ACTGGG	1 cut(s)	1666
BpiI	GAAGAC	1 cut(s)	364
BplI	GAGNNNNNCTC	2 cut(s)	2250, 2282
BpuMI	CCSGG	5 cut(s)	392, 434, 802, 1128, 1211
BsaAI	YACGTR	1 cut(s)	1784
BsaBI	GATNNNNATC	1 cut(s)	2303
BsaHI	GRCGYC	2 cut(s)	207, 273
BsaI	GGTCTC	1 cut(s)	944
BsaJI	CCNNGG	8 cut(s)	238, 417, 565, 662, 1064, 1274, 1428, 1958
BsaWI	WCCGGW	2 cut(s)	454, 774
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 143, 173, 966, 996
Bsc4I	CCNNNNNNNGG	7 cut(s)	239, 243, 384, 397, 668, 965, 971
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	2 cut(s)	1661, 2012
Bse21I	CCTNAGG	1 cut(s)	2267
Bse8I	GATNNNNATC	1 cut(s)	2303
BseBI	CCWGG	2 cut(s)	966, 1960
BseDI	CCNNGG	8 cut(s)	238, 417, 565, 662, 1064, 1274, 1428, 1958
BseGI	GGATG	7 cut(s)	60, 224, 1114, 1297, 1526, 2016, 2277
BseJI	GATNNNNATC	1 cut(s)	2303
BseLI	CCNNNNNNNGG	7 cut(s)	239, 243, 384, 397, 668, 965, 971
BseMII	CTCAG	2 cut(s)	2246, 2281
BseNI	ACTGG	2 cut(s)	1661, 2012
BseRI	GAGGAG	6 cut(s)	58, 61, 82, 293, 311, 406
BseSI	GKGCMC	1 cut(s)	1026
BsgI	GTGCAG	1 cut(s)	1806
Bsh1236I	CGCG	2 cut(s)	77, 567
Bsh1285I	CGRYCG	3 cut(s)	315, 349, 938
BshFI	GGCC	6 cut(s)	284, 318, 818, 1171, 1868, 2279
BshNI	GGYRCC	1 cut(s)	2149
BsiEI	CGRYCG	3 cut(s)	315, 349, 938
BsiHKAI	GWGCWC	1 cut(s)	1026
BsiSI	CCGG	8 cut(s)	315, 392, 433, 455, 775, 801, 1128, 1211
BslFI	GGGAC	2 cut(s)	1048, 2004
BslI	CCNNNNNNNGG	7 cut(s)	239, 243, 384, 397, 668, 965, 971
BsmAI	GTCTC	2 cut(s)	944, 1128
BsmFI	GGGAC	2 cut(s)	1048, 2004
BsnI	GGCC	6 cut(s)	284, 318, 818, 1171, 1868, 2279
Bso31I	GGTCTC	1 cut(s)	944
Bsp1286I	GDGCHC	2 cut(s)	662, 1026
Bsp1407I	TGTACA	1 cut(s)	1176
BspANI	GGCC	6 cut(s)	284, 318, 818, 1171, 1868, 2279
BspCNI	CTCAG	2 cut(s)	2247, 2280
BspFNI	CGCG	2 cut(s)	77, 567
BspLI	GGNNCC	4 cut(s)	389, 681, 1272, 2151
BspMI	ACCTGC	1 cut(s)	774
BspPI	GGATC	4 cut(s)	254, 1333, 1356, 1597
BspQI	GCTCTTC	2 cut(s)	197, 299
BspT107I	GGYRCC	1 cut(s)	2149
BspTNI	GGTCTC	1 cut(s)	944
BsrBI	CCGCTC	2 cut(s)	114, 1931
BsrFI	RCCGGY	1 cut(s)	314
BsrGI	TGTACA	1 cut(s)	1176
BsrI	ACTGG	2 cut(s)	1661, 2012
BssAI	RCCGGY	1 cut(s)	314
BssECI	CCNNGG	8 cut(s)	238, 417, 565, 662, 1064, 1274, 1428, 1958
BssNI	GRCGYC	2 cut(s)	207, 273
BssT1I	CCWWGG	3 cut(s)	662, 1274, 1428
Bst2UI	CCWGG	2 cut(s)	966, 1960
Bst4CI	ACNGT	5 cut(s)	22, 256, 592, 1424, 2347
Bst6I	CTCTTC	3 cut(s)	197, 299, 329
BstACI	GRCGYC	2 cut(s)	207, 273
BstAPI	GCANNNNNTGC	1 cut(s)	2048
BstAUI	TGTACA	1 cut(s)	1176
BstBAI	YACGTR	1 cut(s)	1784
BstDEI	CTNAG	2 cut(s)	2255, 2267
BstDSI	CCRYGG	2 cut(s)	238, 565
BstENI	CCTNNNNNAGG	1 cut(s)	969
BstF5I	GGATG	7 cut(s)	60, 224, 1114, 1297, 1526, 2016, 2277
BstFNI	CGCG	2 cut(s)	77, 567
BstH2I	RGCGCY	2 cut(s)	440, 965
BstHHI	GCGC	3 cut(s)	79, 439, 964
BstMAI	GTCTC	2 cut(s)	944, 1128
BstMCI	CGRYCG	3 cut(s)	315, 349, 938
BstMWI	GCNNNNNNNGC	5 cut(s)	409, 740, 1762, 1878, 2048
BstNI	CCWGG	2 cut(s)	966, 1960
BstNSI	RCATGY	1 cut(s)	1371
BstSCI	CCNGG	7 cut(s)	390, 432, 800, 964, 1126, 1209, 1958
BstSFI	CTRYAG	1 cut(s)	1420
BstSLI	GKGCMC	1 cut(s)	1026
BstUI	CGCG	2 cut(s)	77, 567
BstV2I	GAAGAC	1 cut(s)	364
BstX2I	RGATCY	2 cut(s)	87, 1534
BstYI	RGATCY	2 cut(s)	87, 1534
Bsu36I	CCTNAGG	1 cut(s)	2267
BsuRI	GGCC	6 cut(s)	284, 318, 818, 1171, 1868, 2279
BtgI	CCRYGG	2 cut(s)	238, 565
BtrI	CACGTC	1 cut(s)	213
BtsCI	GGATG	7 cut(s)	60, 224, 1114, 1297, 1526, 2016, 2277
BtsI	GCAGTG	3 cut(s)	1125, 1888, 2187
BtsIMutI	CAGTG	5 cut(s)	1125, 1470, 1844, 1888, 2187
BveI	ACCTGC	1 cut(s)	774
CaiI	CAGNNNCTG	1 cut(s)	965
CfoI	GCGC	3 cut(s)	79, 439, 964
Cfr10I	RCCGGY	1 cut(s)	314
Cfr42I	CCGCGG	1 cut(s)	568
CseI	GACGC	3 cut(s)	215, 1895, 2006
Csp6I	GTAC	7 cut(s)	367, 772, 793, 1000, 1177, 1417, 2150
CviAII	CATG	5 cut(s)	409, 1368, 1703, 2043, 2212
CviQI	GTAC	7 cut(s)	367, 772, 793, 1000, 1177, 1417, 2150
DdeI	CTNAG	2 cut(s)	2255, 2267
DraI	TTTAAA	1 cut(s)	1854
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	2 cut(s)	282, 816
Eam1104I	CTCTTC	3 cut(s)	197, 299, 329
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EarI	CTCTTC	3 cut(s)	197, 299, 329
EciI	GGCGGA	2 cut(s)	85, 328
Eco130I	CCWWGG	3 cut(s)	662, 1274, 1428
Eco147I	AGGCCT	1 cut(s)	1171
Eco24I	GRGCYC	1 cut(s)	662
Eco31I	GGTCTC	1 cut(s)	944
Eco32I	GATATC	1 cut(s)	1990
Eco57I	CTGAAG	3 cut(s)	1383, 1751, 1820
Eco81I	CCTNAGG	1 cut(s)	2267
EcoNI	CCTNNNNNAGG	1 cut(s)	969
EcoRI	GAATTC	1 cut(s)	757
EcoRII	CCWGG	2 cut(s)	964, 1958
EcoRV	GATATC	1 cut(s)	1990
EcoT14I	CCWWGG	3 cut(s)	662, 1274, 1428
EcoT22I	ATGCAT	2 cut(s)	736, 1440
EcoT38I	GRGCYC	1 cut(s)	662
ErhI	CCWWGG	3 cut(s)	662, 1274, 1428
FaeI	CATG	5 cut(s)	412, 1371, 1706, 2046, 2215
FalI	AAGNNNNNCTT	4 cut(s)	356, 388, 1524, 1556
FaqI	GGGAC	2 cut(s)	1048, 2004
FatI	CATG	5 cut(s)	408, 1367, 1702, 2042, 2211
FauI	CCCGC	4 cut(s)	15, 155, 963, 1936
FauNDI	CATATG	1 cut(s)	2353
Fnu4HI	GCNGC	2 cut(s)	80, 565
FokI	GGATG	7 cut(s)	47, 211, 1121, 1304, 1513, 2023, 2284
FriOI	GRGCYC	1 cut(s)	662
Fsp4HI	GCNGC	2 cut(s)	80, 565
FspBI	CTAG	1 cut(s)	663
GlaI	GCGC	3 cut(s)	78, 438, 963
GluI	GCNGC	2 cut(s)	80, 565
HaeII	RGCGCY	2 cut(s)	440, 965
HaeIII	GGCC	6 cut(s)	284, 318, 818, 1171, 1868, 2279
HapII	CCGG	8 cut(s)	315, 392, 433, 455, 775, 801, 1128, 1211
HgaI	GACGC	3 cut(s)	215, 1895, 2006
HhaI	GCGC	3 cut(s)	79, 439, 964
Hin1I	GRCGYC	2 cut(s)	207, 273
Hin1II	CATG	5 cut(s)	412, 1371, 1706, 2046, 2215
Hin6I	GCGC	3 cut(s)	77, 437, 962
HinP1I	GCGC	3 cut(s)	77, 437, 962
HpaII	CCGG	8 cut(s)	315, 392, 433, 455, 775, 801, 1128, 1211
HphI	GGTGA	7 cut(s)	157, 319, 587, 994, 1371, 1826, 2015
Hpy166II	GTNNAC	2 cut(s)	1024, 2263
Hpy188III	TCNNGA	5 cut(s)	137, 463, 1492, 2269, 2302
Hpy8I	GTNNAC	2 cut(s)	1024, 2263
Hpy99I	CGWCG	6 cut(s)	26, 206, 209, 275, 278, 347
HpyAV	CCTTC	9 cut(s)	127, 178, 820, 1392, 1498, 1645, 1844, 2163, 2281
HpyCH4III	ACNGT	5 cut(s)	22, 256, 592, 1424, 2347
HpyCH4IV	ACGT	7 cut(s)	212, 273, 369, 1726, 1783, 2142, 2248
HpyF10VI	GCNNNNNNNGC	5 cut(s)	409, 740, 1762, 1878, 2048
HpyF3I	CTNAG	2 cut(s)	2255, 2267
HpySE526I	ACGT	7 cut(s)	212, 273, 369, 1726, 1783, 2142, 2248
Hsp92I	GRCGYC	2 cut(s)	207, 273
Hsp92II	CATG	5 cut(s)	412, 1371, 1706, 2046, 2215
HspAI	GCGC	3 cut(s)	77, 437, 962
KpnI	GGTACC	1 cut(s)	2153
KspI	CCGCGG	1 cut(s)	568
LguI	GCTCTTC	2 cut(s)	197, 299
LmnI	GCTCC	7 cut(s)	9, 119, 393, 457, 679, 1217, 1303
LweI	GCATC	3 cut(s)	1300, 1465, 1672
MaeI	CTAG	1 cut(s)	663
MaeII	ACGT	7 cut(s)	212, 273, 369, 1726, 1783, 2142, 2248
MaeIII	GTNAC	5 cut(s)	864, 1258, 1627, 1883, 2003
MbiI	CCGCTC	2 cut(s)	114, 1931
MflI	RGATCY	2 cut(s)	87, 1534
MhlI	GDGCHC	2 cut(s)	662, 1026
MlsI	TGGCCA	1 cut(s)	284
MluNI	TGGCCA	1 cut(s)	284
MlyI	GAGTC	4 cut(s)	98, 1069, 1624, 1841
Mox20I	TGGCCA	1 cut(s)	284
Mph1103I	ATGCAT	2 cut(s)	736, 1440
MroXI	GAANNNNTTC	1 cut(s)	1833
MscI	TGGCCA	1 cut(s)	284
MslI	CAYNNNNRTG	2 cut(s)	1029, 1473
Msp20I	TGGCCA	1 cut(s)	284
MspA1I	CMGCKG	1 cut(s)	567
MspI	CCGG	8 cut(s)	315, 392, 433, 455, 775, 801, 1128, 1211
MspR9I	CCNGG	7 cut(s)	392, 434, 802, 966, 1128, 1211, 1960
MvaI	CCWGG	2 cut(s)	966, 1960
MvnI	CGCG	2 cut(s)	77, 567
MwoI	GCNNNNNNNGC	5 cut(s)	409, 740, 1762, 1878, 2048
NciI	CCSGG	5 cut(s)	392, 434, 802, 1128, 1211
NdeI	CATATG	1 cut(s)	2353
NlaIII	CATG	5 cut(s)	412, 1371, 1706, 2046, 2215
NlaIV	GGNNCC	4 cut(s)	389, 681, 1272, 2151
NmeAIII	GCCGAG	2 cut(s)	794, 1819
NmuCI	GTSAC	3 cut(s)	1627, 1883, 2003
NsiI	ATGCAT	2 cut(s)	736, 1440
NspI	RCATGY	1 cut(s)	1371
PaqCI	CACCTGC	1 cut(s)	774
PceI	AGGCCT	1 cut(s)	1171
PciSI	GCTCTTC	2 cut(s)	197, 299
PcsI	WCGNNNNNNNCGW	7 cut(s)	201, 218, 246, 267, 366, 653, 767
PdmI	GAANNNNTTC	1 cut(s)	1833
PfeI	GAWTC	6 cut(s)	26, 482, 487, 615, 2089, 2206
PflFI	GACNNNGTC	2 cut(s)	107, 254
PflMI	CCANNNNNTGG	1 cut(s)	965
PfoI	TCCNGGA	1 cut(s)	390
PkrI	GCNGC	2 cut(s)	81, 566
Ple19I	CGATCG	1 cut(s)	349
PleI	GAGTC	4 cut(s)	98, 1068, 1624, 1841
PpsI	GAGTC	4 cut(s)	98, 1068, 1624, 1841
Ppu21I	YACGTR	1 cut(s)	1784
PsiI	TTATAA	1 cut(s)	1550
Psp6I	CCWGG	2 cut(s)	964, 1958
PspGI	CCWGG	2 cut(s)	964, 1958
PspN4I	GGNNCC	4 cut(s)	389, 681, 1272, 2151
PsrI	GAACNNNNNNTAC	2 cut(s)	1491, 1523
PstNI	CAGNNNCTG	1 cut(s)	965
PsuI	RGATCY	2 cut(s)	87, 1534
PsyI	GACNNNGTC	2 cut(s)	107, 254
PvuI	CGATCG	1 cut(s)	349
RsaI	GTAC	7 cut(s)	368, 773, 794, 1001, 1178, 1418, 2151
RsaNI	GTAC	7 cut(s)	367, 772, 793, 1000, 1177, 1417, 2150
RseI	CAYNNNNRTG	2 cut(s)	1029, 1473
SacII	CCGCGG	1 cut(s)	568
SapI	GCTCTTC	2 cut(s)	197, 299
SatI	GCNGC	2 cut(s)	80, 565
ScaI	AGTACT	2 cut(s)	794, 1001
SchI	GAGTC	4 cut(s)	98, 1069, 1624, 1841
ScrFI	CCNGG	7 cut(s)	392, 434, 802, 966, 1128, 1211, 1960
SduI	GDGCHC	2 cut(s)	662, 1026
SfaNI	GCATC	3 cut(s)	1300, 1465, 1672
SfcI	CTRYAG	1 cut(s)	1420
Sfr303I	CCGCGG	1 cut(s)	568
SgrBI	CCGCGG	1 cut(s)	568
SmiMI	CAYNNNNRTG	2 cut(s)	1029, 1473
SseBI	AGGCCT	1 cut(s)	1171
SspI	AATATT	1 cut(s)	530
SspMI	CTAG	1 cut(s)	663
StuI	AGGCCT	1 cut(s)	1171
StyD4I	CCNGG	7 cut(s)	390, 432, 800, 964, 1126, 1209, 1958
StyI	CCWWGG	3 cut(s)	662, 1274, 1428
TaaI	ACNGT	5 cut(s)	22, 256, 592, 1424, 2347
TaiI	ACGT	7 cut(s)	215, 276, 372, 1729, 1786, 2145, 2251
TatI	WGTACW	4 cut(s)	792, 999, 1176, 1416
TauI	GCSGC	2 cut(s)	82, 567
TfiI	GAWTC	6 cut(s)	26, 482, 487, 615, 2089, 2206
TscAI	CASTG	5 cut(s)	1125, 1477, 1844, 1888, 2187
TseFI	GTSAC	3 cut(s)	1627, 1883, 2003
Tsp45I	GTSAC	3 cut(s)	1627, 1883, 2003
TspDTI	ATGAA	6 cut(s)	397, 1074, 1765, 1959, 2027, 2340
TspGWI	ACGGA	3 cut(s)	97, 918, 1052
TspRI	CASTG	5 cut(s)	1125, 1477, 1844, 1888, 2187
Tth111I	GACNNNGTC	2 cut(s)	107, 254
Van91I	CCANNNNNTGG	1 cut(s)	965
VneI	GTGCAC	1 cut(s)	1022
XagI	CCTNNNNNAGG	1 cut(s)	969
XapI	RAATTY	4 cut(s)	620, 757, 1006, 1947
XceI	RCATGY	1 cut(s)	1371
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1146
XmaJI	CCTAGG	1 cut(s)	662
XmnI	GAANNNNTTC	1 cut(s)	1833
XspI	CTAG	1 cut(s)	663
ZraI	GACGTC	1 cut(s)	274
ZrmI	AGTACT	2 cut(s)	794, 1001
Zsp2I	ATGCAT	2 cut(s)	736, 1440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.