AT5G49930

Nuclear export mediator factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
20308033 .. 20312892
4860 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G49930.1

Sequence Viewer

Length: 3243 bp
ATGGTGAAGGTACGAATGAACACGGCGGACGTCGCCGCCGAAGTCAAGTGCTTGAAGCGATTAATCGGTATGAGATGCTCCAACGTCTATGATATATCTCCCAAGACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAAAGTGAGAAAGTTTTGCTTTTAATGGAAAGTGGTGTTCGTTTACATACCACAGCTTATGTCAGGGATAAGAGTAATACTCCATCTGGGTTTACTTTGAAGTTGAGGAAACATATCAGGACTAGGAGGCTTGAGGATGTTCGACAGCTTGGTTATGATAGGATTATTGTCTTCCAGTTTGGGCTAGGTGCTAATGCTCACTATGTTATATTGGAGCTGTATGCTCAAGGAAACATAATTCTTACTGATTCTGAGTATATGATCATGACACTCCTCCGCTCTCATAGAGATGACAATAAGGGTTTTGCTATTATGTCTCGTCACCGTTACCCGATAGAGATATGTCGAGTCTTTGAGAGAACAACTGTTTCAAAGCTTCAGGAATCACTTACTGCTTTCGTGCTTAAGGATCATGACGCAAAACAGATTGAACCGAAGGAGCAGAATGGTGGCAAAAAGGGTGGGAAGTCAAATGATTCTACGGGTGCCAAACAATATACATTGAAGAATATTCTTGGTGACGCTTTAGGCTATGGGCCACAGCTCTCAGAGCACATTATTCTGGATGCTGGTCTAGTTCCAACTACCAAACTTTCAGAAGACAAGAAATTAGATGATAATGAGATTCAGTTATTGGTTCAAGCGGTGATCGTTTTTGAAGATTGGCTTGAAGATATTATAAATGGTCAAAAAGTTCCTGAAGGTTATATTCTAATGCAAAAACAAATTTTGGCAAATGACACGACTTCTGAATCAGGAGGTGTTAAAAAGATGTATGATGAGTTCTGTTCAATCTTACTAAATCAATTCAAATCAAGAGTGTATGAAAAGTTTGAAACTTTCGATGCGGCTTTAGATGAGTTCTACAGCAAAATTGAGAGCCAAAGGTCTGAACAACAACAAAAGGCAAAAGAAGATTCTGCCAGTCTGAAACTCAATAAGATTCGCCAAGATCAGGAGAACCGTGTTCAAATTCTGAAGAAAGAAGTCAACCATTGTGTTAATATGGCGGAATTAATCGAGTACAACTTAGAAGATGTAGATGCTGCCATATTAGCTGTTCGTGTAGCACTTGCAAAGGGTATGGGCTGGGATGATCTAGCTCGCATGGTCAAGGAAGAAAAAAAATTAGGAAATCCTGTTGCTGGAGTCATTGACAGACTTTATCTGGAGAAGAATTGCATGACCTTGTTGTTGTGCAACAATCTCGATGAAATGGATGATGATGAGAAGACGGTTCCAGTGGAAAAGGTGGAGGTTGACTTATCACTTTCTGCGCATGGTAATGCTAGGCGCTGGTATGAAATGAAGAAGAAGCAAGAAACCAAACAGGAGAAGACTGTTTCTGCCCATGAAAAGGCTTTTAGAGCAGCTGAGAAAAAGACCCGCCACCAACTTTCTCAGGAAAAAGTGGTTGCAACGATTTCACACATGAGAAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAAAACTACTTGGTCATCAGTGGTCGTGATGCTCAGCAAAATGAGATGATAGTTAAACGTTACATGTCAAAAGGAGATCTGTATGTACACGCAGAGCTTCATGGAGCATCTAGTACTGTGATAAAGAATCATAAACCTGAACAAAATGTACCGCCTCTCACTTTAAACCAAGCTGGATGTTTTACGGTTTGTCATAGTCAGGCCTGGGATTCCAAGATTGTTACTAGTGCATGGTGGGTTTATCCTCATCAGGTCACTAAAACAGCTCCTACTGGGGAATACCTTACAGTTGGAAGTTTCATGATACGAGGTAAGAAAAACTTTCTTCCACCACACCCACTCATCATGGGTTTTGGATTATTGTTTCGTTTGGACGAGAGCTCCTTGGGAGCTCATTTGAATGAGAGAAGGGTAAGAGGGGAAGAGGAAGGAATGAATGATGTAGTCATGGAAACACATGCTCCTGATGAGCATTCAGATACTGAGTCAGAGAACGAAGCAGTGAATGAAGTGGTTTCTGCCTCAGGAGAAGTTGATTTGCAGGAATCAAGTACGGCATTGAGCCAAGATACTTCTTCTTTAGACATGAGTTCATCTGGTATTACTGAAGAAAATGTTGCATCAGCCACCTCACAGCTTGAAGATCTTCTTGATAGAACCCTTGGTCTTGGTGCTGCAACGGTGGCAGGCAAGAAAGATACAATAGAGACATCAAAAGATGATATGGAAGAGAAGATGAAACAGGAAGAGAAGAATGCAGTAGTGAGAGATAAGCCTTATATGTCAAAAGCTGAAAGAAGAAAGCTTAAGATGGGCCAAAGCGGCAACACAGCTGCTGATGGTAACACTGGGCAAGAAAAGCAGCAACGAAAGGAAAAAGACGTTTCTTCTTTAAGCCAAGCTACCAAGAGCATACCTGATAACAAGCCAGCTGGGGAAAAAGTTAGCCGTGGGCAAAGGGGTAAACTTAAGAAAATGAAGGAGAAGTATGCTGATCAAGATGAAGACGAAAGAAAAATACGGATGGCATTGTTGGCATCGTCTGGAAAGCCACAGAAGACTGATGTTGAATCACAGAATGCAAAAACCGCGGTCACTGAAGTGAAGAAACCTTCTGAAGAGACAGACGATGCTGTGAAAATATGTTACAGGTGTAAGAAGGTTGGACATCTTGCTAGGGATTGTCATGGGAAAGAAACTTCAGACATGGACAAAGTGGTGATGGAAGAAGACGATATTCATGAAGTTGGGGACGAAGAGAAAGAAAAACTGATTGATGTCGATTACCTTACTGGTAACCCGTTACCAACCGACATCCTTTTATATGCGGTCCCCGTGTGCGGCCCCTACAATGCTCTCCAGTCATATAAATACAGAGTCAAAGCGATTCCAGGCAGCATGAAGAAAGGAAAAGCTGCAAAAACTGCAATGAATCTGTTCACACATATGTCGGAGGCGTCAGTAAGGGAGAAAGAGTTGATGAAAGCTTGTACGGATCCGGAGCTGATGGCTGCTCTTGTCGGGAATGTGAAGATCACAGCAGCAGGTTTGACGCAGTTGAAGCAGAAACAGAAGAAGGGCAAGAAAAGCGGGAAACAACAACATAGCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1080

Amino Acids

121.43

Weight (kDa)

6.86

Isoelectric Point (pI)

43.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NFACT_N PF05833 18 - 505 3.5e-24 NFACT N-terminal and middle domains
NFACT-R_1 PF05670 537 - 648 9.5e-41 NFACT protein RNA binding domain
NFACT-C PF11923 965 - 1057 3.4e-27 NFACT protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013357)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 833
AatII GACGTC 1 cut(s) 33
Acc16I TGCGCA 1 cut(s) 1431
Acc36I ACCTGC 1 cut(s) 3167
AccB1I GGYRCC 1 cut(s) 638
AccBSI CCGCTC 1 cut(s) 432
AccII CGCG 1 cut(s) 2723
AccIII TCCGGA 1 cut(s) 3130
AclI AACGTT 1 cut(s) 1690
AclWI GGATC 3 cut(s) 570, 3122, 3135
AcsI RAATTY 3 cut(s) 879, 1125, 1610
AcuI CTGAAG 7 cut(s) 515, 873, 1151, 2259, 2751, 2769, 2817
AcyI GRCGYC 2 cut(s) 30, 3089
AfaI GTAC 7 cut(s) 12, 1178, 1719, 1747, 1782, 2185, 3124
AfiI CCNNNNNNNGG 4 cut(s) 1108, 1298, 1510, 2972
AflII CTTAAG 3 cut(s) 557, 2438, 2600
AflIII ACRYGT 1 cut(s) 1695
AhlI ACTAGT 1 cut(s) 1856
AjnI CCWGG 2 cut(s) 1835, 3022
AleI CACNNNNGTG 1 cut(s) 2732
Alw21I GWGCWC 3 cut(s) 708, 2015, 2026
Alw26I GTCTC 3 cut(s) 474, 2333, 2747
AlwI GGATC 3 cut(s) 570, 3122, 3135
AlwNI CAGNNNCTG 3 cut(s) 149, 2114, 2468
Aor13HI TCCGGA 1 cut(s) 3130
AoxI GGCC 4 cut(s) 689, 1833, 2446, 2974
ApeKI GCWGC 9 cut(s) 1199, 1523, 2306, 2465, 2494, 3027, 3047, 3143, 3173
ApoI RAATTY 3 cut(s) 879, 1125, 1610
AseI ATTAAT 2 cut(s) 62, 1169
Asp700I GAANNNNTTC 2 cut(s) 2277, 3068
AspLEI GCGC 2 cut(s) 1432, 1449
AspS9I GGNCC 4 cut(s) 689, 2446, 2962, 2975
AsuHPI GGTGA 6 cut(s) 16, 164, 467, 683, 811, 2863
AvaII GGWCC 1 cut(s) 2962
AxyI CCTNAGG 1 cut(s) 2155
BamHI GGATCC 1 cut(s) 3127
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 2 cut(s) 2015, 2026
BbsI GAAGAC 7 cut(s) 316, 759, 1391, 1496, 2643, 2696, 2868
Bbv12I GWGCWC 3 cut(s) 708, 2015, 2026
BbvI GCAGC 9 cut(s) 1186, 1535, 2293, 2452, 2506, 3034, 3039, 3130, 3185
BccI CCATC 6 cut(s) 244, 2437, 2465, 2650, 2848, 3133
BceAI ACGGC 3 cut(s) 39, 2202, 2565
BcgI CGANNNNNNTGC 2 cut(s) 1342, 1376
BciT130I CCWGG 2 cut(s) 1837, 3024
BclI TGATCA 2 cut(s) 414, 2626
BcoDI GTCTC 3 cut(s) 474, 2333, 2747
BcuI ACTAGT 1 cut(s) 1856
BfaI CTAG 9 cut(s) 276, 338, 728, 1253, 1443, 1743, 1857, 2808, 3241
BfmI CTRYAG 1 cut(s) 1018
BfoI RGCGCY 1 cut(s) 1450
BfrI CTTAAG 3 cut(s) 557, 2438, 2600
BfuAI ACCTGC 1 cut(s) 3167
BglI GCCNNNNNGGC 1 cut(s) 2454
BglII AGATCT 2 cut(s) 1708, 2275
BlpI GCTNAGC 1 cut(s) 1665
BmcAI AGTACT 1 cut(s) 1747
Bme1390I CCNGG 2 cut(s) 1837, 3024
Bme18I GGWCC 1 cut(s) 2962
BmgT120I GGNCC 4 cut(s) 689, 2446, 2962, 2975
BmiI GGNNCC 5 cut(s) 640, 1392, 2964, 2977, 3129
BmrFI CCNGG 2 cut(s) 1837, 3024
BmrI ACTGGG 2 cut(s) 1914, 2490
BmsI GCATC 9 cut(s) 65, 709, 988, 1186, 1651, 1748, 2261, 2678, 2752
BmuI ACTGGG 2 cut(s) 1914, 2490
BpiI GAAGAC 7 cut(s) 316, 759, 1391, 1496, 2643, 2696, 2868
BplI GAGNNNNNCTC 2 cut(s) 217, 249
BpmI CTGGAG 3 cut(s) 1320, 1343, 2975
Bpu1102I GCTNAGC 1 cut(s) 1665
BpuEI CTTGAG 2 cut(s) 305, 363
BsaHI GRCGYC 2 cut(s) 30, 3089
BsaJI CCNNGG 5 cut(s) 1836, 2016, 2293, 2581, 2721
BsaWI WCCGGW 1 cut(s) 3130
BsaXI ACNNNNNCTCC 6 cut(s) 1997, 2027, 2077, 2107, 3092, 3122
Bsc4I CCNNNNNNNGG 4 cut(s) 1108, 1298, 1510, 2972
Bse1I ACTGG 8 cut(s) 328, 1077, 1394, 1604, 1909, 2485, 2929, 2992
Bse21I CCTNAGG 1 cut(s) 2155
Bse3DI GCAATG 1 cut(s) 3066
BseAI TCCGGA 1 cut(s) 3130
BseBI CCWGG 2 cut(s) 1837, 3024
BseDI CCNNGG 5 cut(s) 1836, 2016, 2293, 2581, 2721
BseGI GGATG 7 cut(s) 295, 724, 1252, 1378, 1814, 2661, 2946
BseLI CCNNNNNNNGG 4 cut(s) 1108, 1298, 1510, 2972
BseMI GCAATG 1 cut(s) 3066
BseMII CTCAG 7 cut(s) 396, 714, 1518, 1568, 1679, 2106, 2169
BseNI ACTGG 8 cut(s) 328, 1077, 1394, 1604, 1909, 2485, 2929, 2992
BseRI GAGGAG 1 cut(s) 416
BseXI GCAGC 9 cut(s) 1186, 1535, 2293, 2452, 2506, 3034, 3039, 3130, 3185
BseYI CCCAGC 2 cut(s) 1242, 2564
Bsh1236I CGCG 1 cut(s) 2723
BshFI GGCC 4 cut(s) 691, 1835, 2448, 2976
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 3 cut(s) 708, 2015, 2026
BsiSI CCGG 1 cut(s) 3131
BslFI GGGAC 2 cut(s) 2897, 2948
BslI CCNNNNNNNGG 4 cut(s) 1108, 1298, 1510, 2972
BsmAI GTCTC 3 cut(s) 474, 2333, 2747
BsmFI GGGAC 2 cut(s) 2897, 2948
BsmI GAATGC 3 cut(s) 2104, 2392, 2716
BsnI GGCC 4 cut(s) 691, 1835, 2448, 2976
Bsp1286I GDGCHC 3 cut(s) 708, 2015, 2026
Bsp13I TCCGGA 1 cut(s) 3130
Bsp1407I TGTACA 1 cut(s) 1717
Bsp1720I GCTNAGC 1 cut(s) 1665
BspANI GGCC 4 cut(s) 691, 1835, 2448, 2976
BspCNI CTCAG 7 cut(s) 397, 713, 1519, 1567, 1678, 2107, 2168
BspEI TCCGGA 1 cut(s) 3130
BspFNI CGCG 1 cut(s) 2723
BspHI TCATGA 4 cut(s) 417, 565, 1932, 2872
BspLI GGNNCC 5 cut(s) 640, 1392, 2964, 2977, 3129
BspMI ACCTGC 1 cut(s) 3167
BspPI GGATC 3 cut(s) 570, 3122, 3135
BspT107I GGYRCC 1 cut(s) 638
BspTI CTTAAG 3 cut(s) 557, 2438, 2600
BsrBI CCGCTC 1 cut(s) 432
BsrDI GCAATG 1 cut(s) 3066
BsrGI TGTACA 1 cut(s) 1717
BsrI ACTGG 8 cut(s) 328, 1077, 1394, 1604, 1909, 2485, 2929, 2992
BssECI CCNNGG 5 cut(s) 1836, 2016, 2293, 2581, 2721
BssNI GRCGYC 2 cut(s) 30, 3089
BssT1I CCWWGG 2 cut(s) 2016, 2293
Bst2UI CCWGG 2 cut(s) 1837, 3024
Bst4CI ACNGT 9 cut(s) 479, 520, 1118, 1390, 1495, 1750, 1819, 1921, 2314
Bst6I CTCTTC 5 cut(s) 2049, 2355, 2373, 2745, 2883
BstACI GRCGYC 2 cut(s) 30, 3089
BstAFI CTTAAG 3 cut(s) 557, 2438, 2600
BstAPI GCANNNNNTGC 1 cut(s) 3056
BstAUI TGTACA 1 cut(s) 1717
BstC8I GCNNGC 3 cut(s) 1258, 2320, 2562
BstDEI CTNAG 8 cut(s) 405, 700, 1183, 1527, 1554, 1665, 2115, 2155
BstDSI CCRYGG 2 cut(s) 2581, 2721
BstEII GGTNACC 1 cut(s) 2927
BstF5I GGATG 7 cut(s) 295, 724, 1252, 1378, 1814, 2661, 2946
BstFNI CGCG 1 cut(s) 2723
BstH2I RGCGCY 1 cut(s) 1450
BstHHI GCGC 2 cut(s) 1432, 1449
BstMAI GTCTC 3 cut(s) 474, 2333, 2747
BstNI CCWGG 2 cut(s) 1837, 3024
BstNSI RCATGY 2 cut(s) 1699, 2093
BstPI GGTNACC 1 cut(s) 2927
BstSCI CCNGG 2 cut(s) 1835, 3022
BstSFI CTRYAG 1 cut(s) 1018
BstUI CGCG 1 cut(s) 2723
BstV1I GCAGC 9 cut(s) 1186, 1535, 2293, 2452, 2506, 3034, 3039, 3130, 3185
BstV2I GAAGAC 7 cut(s) 316, 759, 1391, 1496, 2643, 2696, 2868
BstX2I RGATCY 3 cut(s) 1708, 2275, 3127
BstYI RGATCY 3 cut(s) 1708, 2275, 3127
Bsu36I CCTNAGG 1 cut(s) 2155
BsuRI GGCC 4 cut(s) 691, 1835, 2448, 2976
BtgI CCRYGG 2 cut(s) 2581, 2721
BtsCI GGATG 7 cut(s) 295, 724, 1252, 1378, 1814, 2661, 2946
BtsI GCAGTG 2 cut(s) 1636, 2139
BtsIMutI CAGTG 7 cut(s) 1401, 1597, 1636, 1657, 2139, 2478, 2727
BveI ACCTGC 1 cut(s) 3167
Cac8I GCNNGC 3 cut(s) 1258, 2320, 2562
CaiI CAGNNNCTG 3 cut(s) 149, 2114, 2468
CciI TCATGA 4 cut(s) 417, 565, 1932, 2872
CfoI GCGC 2 cut(s) 1432, 1449
Cfr13I GGNCC 4 cut(s) 689, 2446, 2962, 2975
Cfr42I CCGCGG 1 cut(s) 2724
CseI GACGC 4 cut(s) 578, 683, 3078, 3193
Csp6I GTAC 7 cut(s) 11, 1177, 1718, 1746, 1781, 2184, 3123
CspCI CAANNNNNGTGG 2 cut(s) 595, 630
CviQI GTAC 7 cut(s) 11, 1177, 1718, 1746, 1781, 2184, 3123
DdeI CTNAG 8 cut(s) 405, 700, 1183, 1527, 1554, 1665, 2115, 2155
DraI TTTAAA 1 cut(s) 1797
Eam1104I CTCTTC 5 cut(s) 2049, 2355, 2373, 2745, 2883
EarI CTCTTC 5 cut(s) 2049, 2355, 2373, 2745, 2883
EciI GGCGGA 2 cut(s) 41, 1178
Ecl136II GAGCTC 2 cut(s) 2013, 2024
Eco130I CCWWGG 2 cut(s) 2016, 2293
Eco147I AGGCCT 1 cut(s) 1835
Eco24I GRGCYC 2 cut(s) 2015, 2026
Eco47I GGWCC 1 cut(s) 2962
Eco53kI GAGCTC 2 cut(s) 2013, 2024
Eco57I CTGAAG 7 cut(s) 515, 873, 1151, 2259, 2751, 2769, 2817
Eco81I CCTNAGG 1 cut(s) 2155
Eco91I GGTNACC 1 cut(s) 2927
EcoICRI GAGCTC 2 cut(s) 2013, 2024
EcoO65I GGTNACC 1 cut(s) 2927
EcoRII CCWGG 2 cut(s) 1835, 3022
EcoT14I CCWWGG 2 cut(s) 2016, 2293
EcoT38I GRGCYC 2 cut(s) 2015, 2026
ErhI CCWWGG 2 cut(s) 2016, 2293
FalI AAGNNNNNCTT 8 cut(s) 156, 188, 804, 836, 1937, 1969, 2265, 2297
FaqI GGGAC 2 cut(s) 2897, 2948
FauI CCCGC 2 cut(s) 1547, 3215
FauNDI CATATG 1 cut(s) 3078
FbaI TGATCA 2 cut(s) 414, 2626
FokI GGATG 7 cut(s) 302, 731, 1259, 1385, 1821, 2668, 2933
FriOI GRGCYC 2 cut(s) 2015, 2026
FspBI CTAG 9 cut(s) 276, 338, 728, 1253, 1443, 1743, 1857, 2808, 3241
FspI TGCGCA 1 cut(s) 1431
GlaI GCGC 2 cut(s) 1431, 1448
GsaI CCCAGC 2 cut(s) 1246, 2568
GsuI CTGGAG 3 cut(s) 1320, 1343, 2975
HaeII RGCGCY 1 cut(s) 1450
HaeIII GGCC 4 cut(s) 691, 1835, 2448, 2976
HapII CCGG 1 cut(s) 3131
HgaI GACGC 4 cut(s) 578, 683, 3078, 3193
HhaI GCGC 2 cut(s) 1432, 1449
Hin1I GRCGYC 2 cut(s) 30, 3089
Hin6I GCGC 2 cut(s) 1430, 1447
HinP1I GCGC 2 cut(s) 1430, 1447
HincII GTYRAC 2 cut(s) 1144, 1414
HindII GTYRAC 2 cut(s) 1144, 1414
HindIII AAGCTT 3 cut(s) 527, 2435, 3117
HpaII CCGG 1 cut(s) 3131
HphI GGTGA 6 cut(s) 16, 164, 467, 683, 811, 2863
Hpy166II GTNNAC 8 cut(s) 197, 246, 1144, 1414, 1597, 1720, 2597, 3072
Hpy8I GTNNAC 8 cut(s) 197, 246, 1144, 1414, 1597, 1720, 2597, 3072
Hpy99I CGWCG 1 cut(s) 35
HpyAV CCTTC 8 cut(s) 583, 848, 2034, 2054, 2605, 2754, 2785, 3202
HpyCH4III ACNGT 9 cut(s) 479, 520, 1118, 1390, 1495, 1750, 1819, 1921, 2314
HpyCH4IV ACGT 5 cut(s) 30, 84, 107, 1690, 2514
HpyF3I CTNAG 8 cut(s) 405, 700, 1183, 1527, 1554, 1665, 2115, 2155
HpySE526I ACGT 5 cut(s) 30, 84, 107, 1690, 2514
Hsp92I GRCGYC 2 cut(s) 30, 3089
HspAI GCGC 2 cut(s) 1430, 1447
Kpn2I TCCGGA 1 cut(s) 3130
Ksp22I TGATCA 2 cut(s) 414, 2626
KspI CCGCGG 1 cut(s) 2724
LmnI GCTCC 9 cut(s) 83, 367, 592, 1736, 1903, 2018, 2021, 2098, 3133
Lsp1109I GCAGC 9 cut(s) 1186, 1535, 2293, 2452, 2506, 3034, 3039, 3130, 3185
LweI GCATC 9 cut(s) 65, 709, 988, 1186, 1651, 1748, 2261, 2678, 2752
MaeI CTAG 9 cut(s) 276, 338, 728, 1253, 1443, 1743, 1857, 2808, 3241
MaeII ACGT 5 cut(s) 30, 84, 107, 1690, 2514
MbiI CCGCTC 1 cut(s) 432
MflI RGATCY 3 cut(s) 1708, 2275, 3127
MhlI GDGCHC 3 cut(s) 708, 2015, 2026
MlyI GAGTC 4 cut(s) 510, 1311, 2126, 3018
MmeI TCCRAC 5 cut(s) 105, 758, 1903, 2776, 3063
MroI TCCGGA 1 cut(s) 3130
MroXI GAANNNNTTC 2 cut(s) 2277, 3068
MslI CAYNNNNRTG 5 cut(s) 441, 1437, 2031, 2732, 3077
MspA1I CMGCKG 4 cut(s) 1526, 2465, 2564, 2723
MspCI CTTAAG 3 cut(s) 557, 2438, 2600
MspI CCGG 1 cut(s) 3131
MspR9I CCNGG 2 cut(s) 1837, 3024
Mva1269I GAATGC 3 cut(s) 2104, 2392, 2716
MvaI CCWGG 2 cut(s) 1837, 3024
MvnI CGCG 1 cut(s) 2723
NdeI CATATG 1 cut(s) 3078
NlaIV GGNNCC 5 cut(s) 640, 1392, 2964, 2977, 3129
NmuCI GTSAC 4 cut(s) 473, 671, 1885, 2725
NsbI TGCGCA 1 cut(s) 1431
NspI RCATGY 2 cut(s) 1699, 2093
OliI CACNNNNGTG 1 cut(s) 2732
PagI TCATGA 4 cut(s) 417, 565, 1932, 2872
PceI AGGCCT 1 cut(s) 1835
PciI ACATGT 1 cut(s) 1695
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PctI GAATGC 3 cut(s) 2104, 2392, 2716
PdmI GAANNNNTTC 2 cut(s) 2277, 3068
PleI GAGTC 4 cut(s) 509, 1310, 2125, 3017
PpsI GAGTC 4 cut(s) 509, 1310, 2125, 3017
PscI ACATGT 1 cut(s) 1695
PshBI ATTAAT 2 cut(s) 62, 1169
PsiI TTATAA 1 cut(s) 833
Psp124BI GAGCTC 2 cut(s) 2015, 2026
Psp1406I AACGTT 1 cut(s) 1690
Psp6I CCWGG 2 cut(s) 1835, 3022
PspEI GGTNACC 1 cut(s) 2927
PspFI CCCAGC 2 cut(s) 1242, 2564
PspGI CCWGG 2 cut(s) 1835, 3022
PspN4I GGNNCC 5 cut(s) 640, 1392, 2964, 2977, 3129
PspPI GGNCC 4 cut(s) 689, 2446, 2962, 2975
PsrI GAACNNNNNNTAC 4 cut(s) 920, 952, 1764, 1796
PstNI CAGNNNCTG 3 cut(s) 149, 2114, 2468
PsuI RGATCY 3 cut(s) 1708, 2275, 3127
PvuII CAGCTG 3 cut(s) 1526, 2465, 2564
RsaI GTAC 7 cut(s) 12, 1178, 1719, 1747, 1782, 2185, 3124
RsaNI GTAC 7 cut(s) 11, 1177, 1718, 1746, 1781, 2184, 3123
RseI CAYNNNNRTG 5 cut(s) 441, 1437, 2031, 2732, 3077
SacI GAGCTC 2 cut(s) 2015, 2026
SacII CCGCGG 1 cut(s) 2724
Sau96I GGNCC 4 cut(s) 689, 2446, 2962, 2975
ScaI AGTACT 1 cut(s) 1747
SchI GAGTC 4 cut(s) 510, 1311, 2126, 3018
ScrFI CCNGG 2 cut(s) 1837, 3024
SduI GDGCHC 3 cut(s) 708, 2015, 2026
SfaNI GCATC 9 cut(s) 65, 709, 988, 1186, 1651, 1748, 2261, 2678, 2752
SfcI CTRYAG 1 cut(s) 1018
Sfr303I CCGCGG 1 cut(s) 2724
SgrBI CCGCGG 1 cut(s) 2724
SinI GGWCC 1 cut(s) 2962
SmiMI CAYNNNNRTG 5 cut(s) 441, 1437, 2031, 2732, 3077
SmlI CTYRAG 5 cut(s) 284, 378, 557, 2438, 2600
SmoI CTYRAG 5 cut(s) 284, 378, 557, 2438, 2600
SpeI ACTAGT 1 cut(s) 1856
SseBI AGGCCT 1 cut(s) 1835
SspI AATATT 1 cut(s) 664
SspMI CTAG 9 cut(s) 276, 338, 728, 1253, 1443, 1743, 1857, 2808, 3241
SstI GAGCTC 2 cut(s) 2015, 2026
StuI AGGCCT 1 cut(s) 1835
StyD4I CCNGG 2 cut(s) 1835, 3022
StyI CCWWGG 2 cut(s) 2016, 2293
TaaI ACNGT 9 cut(s) 479, 520, 1118, 1390, 1495, 1750, 1819, 1921, 2314
TaiI ACGT 5 cut(s) 33, 87, 110, 1693, 2517
TaqI TCGA 6 cut(s) 295, 499, 996, 1173, 1362, 2913
TatI WGTACW 3 cut(s) 1176, 1717, 1745
TauI GCSGC 4 cut(s) 38, 1004, 2457, 2976
TscAI CASTG 7 cut(s) 1401, 1604, 1636, 1657, 2139, 2485, 2734
TseFI GTSAC 4 cut(s) 473, 671, 1885, 2725
TseI GCWGC 9 cut(s) 1199, 1523, 2306, 2465, 2494, 3027, 3047, 3143, 3173
Tsp45I GTSAC 4 cut(s) 473, 671, 1885, 2725
TspGWI ACGGA 2 cut(s) 2668, 3140
TspRI CASTG 7 cut(s) 1401, 1604, 1636, 1657, 2139, 2485, 2734
Vha464I CTTAAG 3 cut(s) 557, 2438, 2600
VpaK11BI GGWCC 1 cut(s) 2962
VspI ATTAAT 2 cut(s) 62, 1169
XapI RAATTY 3 cut(s) 879, 1125, 1610
XceI RCATGY 2 cut(s) 1699, 2093
XmnI GAANNNNTTC 2 cut(s) 2277, 3068
XspI CTAG 9 cut(s) 276, 338, 728, 1253, 1443, 1743, 1857, 2808, 3241
ZraI GACGTC 1 cut(s) 31
ZrmI AGTACT 1 cut(s) 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.