Rh4AG266500

Nuclear export mediator factor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
58265911 .. 58273271
7361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG266500.1

Sequence Viewer

Length: 2910 bp
ATGGTGAAGGTGCGGATGAACACGGCCGACGTGGCCGCCGAGGTCAAGTGCTTGCGGCGGCTTATCGGCATGCGCTGCGCCAATGTCTACGATCTCTCTCCCAAGACCTATATGTTGAAGCTTATGAACAGTAGCGGCGTCACCGAGTCCGGCGAGAGCGAGAAGGCCTTCTTGCTTATCGAAAGCGGCGTCAGATTGCACACTACTGCCTATGTTCGGGACAAGAGTAATACTCCGTCTGGTTTTACGCTCAAAATAAGGAAGCATATACGAACAAGAAGGCTCGAGGATGTGAGGCAGCTGGGATACGATCGGATTATACTATTTCAGTTTGGATTGGGTGCTAATGCCTACTATGTTATATTGGAGCTATATGCGCAAGGAAATATTATTCTTGCAGATTCCGAATATATGGTCATGACTCTTCTTCGCTCGCATAGGGATGATGACAAAGGGGTTGCAATTATGTCACGCCATCGTTATCCAATAGAGATTTGTCGAGTTTTTGAGCGAACAACCGCTGCAAAGTTGCAGGAAGCCCTTACATATTCCAAGGAACCTGATAACAATGAATCTGTAAAAGATTCTGAAGGTCGAAATGATGCATCTGATGCGCCAAAAGAAAAAAAGGGTGGTCGTAAAGGTGGGAAGCCCGTCGAGTCCAGTAAAAAGCCTGGTGATGCTAAAGCCAAACAAGCCACTTTGAAGAATGTTCTAGGGGACGGACTGGGCTATGGACCTGCCCTTTCTGAGCATATTATTTTAGATGCTGGTCTTGTTCCAAATACTAAAGTTGGTAAAGATGAAAAGCTAGATGACAATACACTAAAGCTTTTGCTCGAAGCTGTTACAAAATTTGAGGACTGGCTGCATGATGTTATATCCGGTGAAAAAGTTCCTGAAGGATACATTTTGATGCAGAACAAAAATTCAGGGAAGAATGGTCCCCCATCTGAACCAGGAAGTTCTGGCCAGATATATGATGAATTCTGCCCCATATTATTGAACCAATTCAAGTCGAGGGAGTATGTGCAGTTTGAAACATTTGATGCATCTTTGGATGAGTTCTATAGCAAAATTGAGAGTCAAAGGTCAGAGCAGCAACAAAAAGCAAAAGAGAGCTCTGCCACCCAGAGGCTTAATAAAATCCGCGTGGATCAGGAAAATCGTGTGCATATGTTAAGGAAAGAGGTTGACCAATGTGTTAAAATGGCGGAATTGATAGAATATAATTTAGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGCATGAGTTGGGAGGATCTTGCTCGTATGGTAAAGGAAGAGAAGAAATCTGGAAATCCTATTGCCGGACTCATTGACAAGCTTTATCTTGAAAGGAATTGCATGACATTGCTTTTGAGCAACAATCTTGATGAAATGGATGATGATGAGAAGACTCTCCCTGCAGATAAGGTGGAAGTTGATTTAGCGCTTTCTGCACATGCCAATGCTCGGCGGTGGTATGAACTAAAGAAAAGCAAGGAGAGCAAACAGGAGAAGACTGTAACAGCACATGAAAAAGCATTTAAAGCTGCCGAAAGAAAGACTCGTCTGCAGCTATCGCAGGAAAAAGCTGTTGCTACCATTTCACATATGCGCAAGGTTCACTGGTTTGAGAAATTTAACTGGTTCATCAGCAGTGAAAACTATTTGGTTATCAGTGGACGTGATGCTCAACAAAATGAGATGATAGTCAAGCGCTACATGTCAAAAGGAGATCTGTATGTTCATGCAGATTTGCATGGCGCTTCTAGTACTGTAATAAAGAACCATAGGCCCGAACAACCAGTGCCTCCACTTACTTTAAATCAAGCTGGATGCTACACAGTTTGCCAAAGTGCGGCATGGGATTCAAAGATGGTCACTAGTGCTTGGTGGGTTTATCCTCACCAAGTCAGTAAAACTGCTCCTACAGGGGAGTATCTTACAGTTGGAAGTTTCATGATTCGTGGGAAGAAGAACTTCCTTCCTCCACACCCTCTGATTATGGGCTTTGGGCTGTTATTTCGGTTGGATGAGAGCTCCTTGGGTTCACATCTGAACGAGAGGAGGGTAAGAGGTGAGGAGGAAGGGACAAATGATGCTGATGAAAGTGGGCCTCTAAGTGAGGTTTCTGATTCTGAATCAGAGAAGGATTTGAGAGAGGAAAAAATTCTAGGGGAATCACAAAGTGAACCAGATTCATCTAAACATGTACATAAACCAGATGATATATCCTCTCAGAATAGCTTACCTACAACCGTTGCTAAACAAGTGGACTCAAATGAAAGTTCCATGAAAACCAGGAACATCTTGAATGATGTTGATCAAGACAACGCAGTTGATGTTGCTGTGAATGGTGTTGCACCTGTCACCGCACAACTTGAGGACCTCATTGATAGAGCTCTTGGGCTTGGATCTGCATCTATGTCTGTTAAAAATTATAAAGTTGAAACCTCTCCAGTTGATTCGGTAGCAGAACAAAATGTTGAAGAGAATAAGGCTACAGTAAAAGAGAAAGCTTATATCTCGAAAGCTGAAAGAAGAAAGCTCAAGAAAGGCCAGTGTGTTCCTGAAGATGTTAAACCGAAAGTAGATAAAGTGAAAGAAAATGTTTCTGTCCGTCAGCCTGAAAAGGAAGCAAATGATAAGAAGCCAGGTGGTGGAAAAACCAGCCGTGGACAGAGGGGTAAACTCAAGAAGATAAAAGAGAAATATGCCGATCAAGATGAGGAAGAAAGAAGGATTCGTATGGCTTTACTAGCCGTGAGTAACTTCATTACCTTTTACATTGGATTTTTAGAACCAATTGATTTTCTTGCCTTGATTCCTTTAAGTTTTATGATCTATAATCTTGCCATTTATGTTGGCTTTTTTTTTGTGACATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

969

Amino Acids

108.95

Weight (kDa)

6.87

Isoelectric Point (pI)

43.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NFACT_N PF05833 21 - 149 5.3e-13 NFACT N-terminal and middle domains
NFACT_N PF05833 231 - 518 1.8e-08 NFACT N-terminal and middle domains
NFACT-R_1 PF05670 554 - 665 5.3e-41 NFACT protein RNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013357)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2466
Acc16I TGCGCA 2 cut(s) 378, 1640
Acc36I ACCTGC 1 cut(s) 748
AccB7I CCANNNNNTGG 1 cut(s) 2684
AccI GTMKAC 1 cut(s) 87
AccII CGCG 1 cut(s) 1152
AclWI GGATC 3 cut(s) 1164, 1308, 2446
AcoI YGGCCR 3 cut(s) 24, 33, 970
AcsI RAATTY 5 cut(s) 854, 928, 986, 1661, 2193
AcuI CTGAAG 3 cut(s) 609, 921, 2616
AcyI GRCGYC 2 cut(s) 138, 189
AdeI CACNNNGTG 1 cut(s) 2213
AfaI GTAC 2 cut(s) 1798, 2238
AfeI AGCGCT 2 cut(s) 1473, 1742
AfiI CCNNNNNNNGG 6 cut(s) 216, 1134, 1349, 1494, 1882, 2684
AflIII ACRYGT 2 cut(s) 1746, 2233
AhlI ACTAGT 1 cut(s) 1907
AjiI CACGTC 2 cut(s) 31, 1709
AjnI CCWGG 4 cut(s) 673, 958, 2324, 2677
Alw21I GWGCWC 3 cut(s) 1124, 2066, 2428
AlwI GGATC 3 cut(s) 1164, 1308, 2446
Ama87I CYCGRG 1 cut(s) 284
Aor51HI AGCGCT 2 cut(s) 1473, 1742
AoxI GGCC 7 cut(s) 24, 33, 165, 970, 1817, 2138, 2581
ApeKI GCWGC 8 cut(s) 75, 298, 521, 868, 1099, 1250, 1574, 1597
ApoI RAATTY 5 cut(s) 854, 928, 986, 1661, 2193
ArsI GACNNNNNNTTYG 6 cut(s) 174, 206, 399, 431, 1381, 1413
Asp700I GAANNNNTTC 5 cut(s) 167, 894, 1010, 2003, 2193
AspLEI GCGC 8 cut(s) 75, 80, 379, 616, 1474, 1641, 1743, 1790
AspS9I GGNCC 5 cut(s) 737, 944, 1818, 2138, 2410
AsuHPI GGTGA 7 cut(s) 16, 133, 689, 899, 1922, 2114, 2386
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 3 cut(s) 737, 944, 2410
BalI TGGCCA 1 cut(s) 972
BanII GRGCYC 3 cut(s) 1124, 2066, 2428
BbsI GAAGAC 2 cut(s) 1442, 1547
Bbv12I GWGCWC 3 cut(s) 1124, 2066, 2428
BbvI GCAGC 8 cut(s) 62, 310, 508, 855, 1111, 1237, 1561, 1609
BccI CCATC 3 cut(s) 483, 958, 1894
BceAI ACGGC 3 cut(s) 39, 2682, 2771
BciT130I CCWGG 4 cut(s) 675, 960, 2326, 2679
BciVI GTATCC 2 cut(s) 299, 899
BclI TGATCA 1 cut(s) 2347
BcuI ACTAGT 1 cut(s) 1907
BfaI CTAG 6 cut(s) 716, 812, 1794, 1908, 2198, 2783
BfmI CTRYAG 5 cut(s) 1069, 1446, 1595, 1953, 2526
BfoI RGCGCY 3 cut(s) 1475, 1744, 1791
BfuAI ACCTGC 1 cut(s) 748
BfuI GTATCC 2 cut(s) 299, 899
BglI GCCNNNNNGGC 1 cut(s) 32
BglII AGATCT 1 cut(s) 1759
BmcAI AGTACT 1 cut(s) 1798
Bme1390I CCNGG 4 cut(s) 675, 960, 2326, 2679
Bme18I GGWCC 3 cut(s) 737, 944, 2410
BmeT110I CYCGRG 1 cut(s) 284
BmgBI CACGTC 2 cut(s) 31, 1709
BmgT120I GGNCC 5 cut(s) 737, 944, 1818, 2138, 2410
BmiI GGNNCC 2 cut(s) 558, 946
BmrFI CCNGG 4 cut(s) 675, 960, 2326, 2679
BmrI ACTGGG 1 cut(s) 737
BmuI ACTGGG 1 cut(s) 737
BpiI GAAGAC 2 cut(s) 1442, 1547
BplI GAGNNNNNCTC 2 cut(s) 217, 249
BpmI CTGGAG 1 cut(s) 2466
BpuEI CTTGAG 3 cut(s) 2426, 2558, 2702
BsaBI GATNNNNATC 2 cut(s) 2346, 2443
BsaHI GRCGYC 2 cut(s) 138, 189
BsaJI CCNNGG 4 cut(s) 39, 552, 2067, 2698
BsaWI WCCGGW 1 cut(s) 884
Bsc4I CCNNNNNNNGG 6 cut(s) 216, 1134, 1349, 1494, 1882, 2684
Bse1I ACTGG 8 cut(s) 663, 732, 869, 1655, 1673, 1829, 2483, 2584
Bse3DI GCAATG 1 cut(s) 1391
Bse8I GATNNNNATC 2 cut(s) 2346, 2443
BseBI CCWGG 4 cut(s) 675, 960, 2326, 2679
BseDI CCNNGG 4 cut(s) 39, 552, 2067, 2698
BseGI GGATG 8 cut(s) 21, 295, 448, 1066, 1252, 1429, 1865, 2062
BseJI GATNNNNATC 2 cut(s) 2346, 2443
BseLI CCNNNNNNNGG 6 cut(s) 216, 1134, 1349, 1494, 1882, 2684
BseMI GCAATG 1 cut(s) 1391
BseMII CTCAG 2 cut(s) 741, 2276
BseNI ACTGG 8 cut(s) 663, 732, 869, 1655, 1673, 1829, 2483, 2584
BseRI GAGGAG 2 cut(s) 2104, 2120
BseX3I CGGCCG 1 cut(s) 24
BseXI GCAGC 8 cut(s) 62, 310, 508, 855, 1111, 1237, 1561, 1609
BseYI CCCAGC 1 cut(s) 301
BsgI GTGCAG 2 cut(s) 1052, 1464
Bsh1236I CGCG 1 cut(s) 1152
Bsh1285I CGRYCG 2 cut(s) 27, 313
BshFI GGCC 7 cut(s) 26, 35, 167, 972, 1819, 2140, 2583
BsiEI CGRYCG 2 cut(s) 27, 313
BsiHKAI GWGCWC 3 cut(s) 1124, 2066, 2428
BsiHKCI CYCGRG 1 cut(s) 284
BsiSI CCGG 3 cut(s) 150, 885, 1350
BslFI GGGAC 4 cut(s) 233, 734, 930, 2128
BslI CCNNNNNNNGG 6 cut(s) 216, 1134, 1349, 1494, 1882, 2684
BsmFI GGGAC 4 cut(s) 233, 734, 930, 2128
BsnI GGCC 7 cut(s) 26, 35, 167, 972, 1819, 2140, 2583
BsoBI CYCGRG 1 cut(s) 284
Bsp1286I GDGCHC 3 cut(s) 1124, 2066, 2428
Bsp1407I TGTACA 1 cut(s) 2236
Bsp143I GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
BspANI GGCC 7 cut(s) 26, 35, 167, 972, 1819, 2140, 2583
BspCNI CTCAG 2 cut(s) 742, 2275
BspFNI CGCG 1 cut(s) 1152
BspHI TCATGA 2 cut(s) 417, 1983
BspLI GGNNCC 2 cut(s) 558, 946
BspMAI CTGCAG 2 cut(s) 1450, 1599
BspMI ACCTGC 1 cut(s) 748
BspPI GGATC 3 cut(s) 1164, 1308, 2446
BsrDI GCAATG 1 cut(s) 1391
BsrGI TGTACA 1 cut(s) 2236
BsrI ACTGG 8 cut(s) 663, 732, 869, 1655, 1673, 1829, 2483, 2584
BssECI CCNNGG 4 cut(s) 39, 552, 2067, 2698
BssMI GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
BssNI GRCGYC 2 cut(s) 138, 189
BssT1I CCWWGG 2 cut(s) 552, 2067
Bst2UI CCWGG 4 cut(s) 675, 960, 2326, 2679
Bst4CI ACNGT 7 cut(s) 131, 1546, 1801, 1870, 1972, 2284, 2530
Bst6I CTCTTC 3 cut(s) 429, 1317, 2508
BstACI GRCGYC 2 cut(s) 138, 189
BstAPI GCANNNNNTGC 2 cut(s) 75, 611
BstAUI TGTACA 1 cut(s) 2236
BstC8I GCNNGC 3 cut(s) 53, 71, 434
BstDEI CTNAG 3 cut(s) 750, 2144, 2262
BstDSI CCRYGG 1 cut(s) 2698
BstF5I GGATG 8 cut(s) 21, 295, 448, 1066, 1252, 1429, 1865, 2062
BstFNI CGCG 1 cut(s) 1152
BstH2I RGCGCY 3 cut(s) 1475, 1744, 1791
BstHHI GCGC 8 cut(s) 75, 80, 379, 616, 1474, 1641, 1743, 1790
BstKTI GATC 9 cut(s) 94, 313, 1159, 1303, 1762, 2350, 2441, 2746, 2868
BstMBI GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
BstMCI CGRYCG 2 cut(s) 27, 313
BstNI CCWGG 4 cut(s) 675, 960, 2326, 2679
BstNSI RCATGY 4 cut(s) 73, 1487, 1750, 2237
BstSCI CCNGG 4 cut(s) 673, 958, 2324, 2677
BstSFI CTRYAG 5 cut(s) 1069, 1446, 1595, 1953, 2526
BstUI CGCG 1 cut(s) 1152
BstV1I GCAGC 8 cut(s) 62, 310, 508, 855, 1111, 1237, 1561, 1609
BstV2I GAAGAC 2 cut(s) 1442, 1547
BstX2I RGATCY 3 cut(s) 1300, 1759, 2438
BstYI RGATCY 3 cut(s) 1300, 1759, 2438
BstZI CGGCCG 1 cut(s) 24
BsuI GTATCC 2 cut(s) 299, 899
BsuRI GGCC 7 cut(s) 26, 35, 167, 972, 1819, 2140, 2583
BtgI CCRYGG 1 cut(s) 2698
BtrI CACGTC 2 cut(s) 31, 1709
BtsCI GGATG 8 cut(s) 21, 295, 448, 1066, 1252, 1429, 1865, 2062
BtsI GCAGTG 1 cut(s) 1687
BtsIMutI CAGTG 5 cut(s) 1648, 1687, 1708, 1836, 2591
BveI ACCTGC 1 cut(s) 748
Cac8I GCNNGC 3 cut(s) 53, 71, 434
CciI TCATGA 2 cut(s) 417, 1983
CfoI GCGC 8 cut(s) 75, 80, 379, 616, 1474, 1641, 1743, 1790
Cfr13I GGNCC 5 cut(s) 737, 944, 1818, 2138, 2410
CseI GACGC 2 cut(s) 127, 178
Csp6I GTAC 2 cut(s) 1797, 2237
CviQI GTAC 2 cut(s) 1797, 2237
DdeI CTNAG 3 cut(s) 750, 2144, 2262
DpnI GATC 9 cut(s) 93, 312, 1158, 1302, 1761, 2349, 2440, 2745, 2867
DpnII GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
DraI TTTAAA 2 cut(s) 1570, 1848
DraIII CACNNNGTG 1 cut(s) 2213
EaeI YGGCCR 3 cut(s) 24, 33, 970
EagI CGGCCG 1 cut(s) 24
Eam1104I CTCTTC 3 cut(s) 429, 1317, 2508
EarI CTCTTC 3 cut(s) 429, 1317, 2508
EciI GGCGGA 1 cut(s) 1229
Ecl136II GAGCTC 3 cut(s) 1122, 2064, 2426
EclXI CGGCCG 1 cut(s) 24
Eco130I CCWWGG 2 cut(s) 552, 2067
Eco147I AGGCCT 1 cut(s) 167
Eco24I GRGCYC 3 cut(s) 1124, 2066, 2428
Eco47I GGWCC 3 cut(s) 737, 944, 2410
Eco47III AGCGCT 2 cut(s) 1473, 1742
Eco52I CGGCCG 1 cut(s) 24
Eco53kI GAGCTC 3 cut(s) 1122, 2064, 2426
Eco57I CTGAAG 3 cut(s) 609, 921, 2616
Eco88I CYCGRG 1 cut(s) 284
EcoICRI GAGCTC 3 cut(s) 1122, 2064, 2426
EcoO109I RGGNCCY 1 cut(s) 2410
EcoRI GAATTC 1 cut(s) 986
EcoRII CCWGG 4 cut(s) 673, 958, 2324, 2677
EcoT14I CCWWGG 2 cut(s) 552, 2067
EcoT22I ATGCAT 2 cut(s) 607, 1054
EcoT38I GRGCYC 3 cut(s) 1124, 2066, 2428
ErhI CCWWGG 2 cut(s) 552, 2067
FalI AAGNNNNNCTT 4 cut(s) 155, 187, 1988, 2020
FaqI GGGAC 4 cut(s) 233, 734, 930, 2128
FauNDI CATATG 2 cut(s) 1176, 1635
FbaI TGATCA 1 cut(s) 2347
FblI GTMKAC 1 cut(s) 87
FokI GGATG 8 cut(s) 28, 302, 455, 1073, 1259, 1436, 1872, 2069
FriOI GRGCYC 3 cut(s) 1124, 2066, 2428
FspBI CTAG 6 cut(s) 716, 812, 1794, 1908, 2198, 2783
FspI TGCGCA 2 cut(s) 378, 1640
GlaI GCGC 8 cut(s) 74, 79, 378, 615, 1473, 1640, 1742, 1789
GsaI CCCAGC 1 cut(s) 305
GsuI CTGGAG 1 cut(s) 2466
HaeII RGCGCY 3 cut(s) 1475, 1744, 1791
HaeIII GGCC 7 cut(s) 26, 35, 167, 972, 1819, 2140, 2583
HapII CCGG 3 cut(s) 150, 885, 1350
HgaI GACGC 2 cut(s) 127, 178
HhaI GCGC 8 cut(s) 75, 80, 379, 616, 1474, 1641, 1743, 1790
Hin1I GRCGYC 2 cut(s) 138, 189
Hin6I GCGC 8 cut(s) 73, 78, 377, 614, 1472, 1639, 1741, 1788
HinP1I GCGC 8 cut(s) 73, 78, 377, 614, 1472, 1639, 1741, 1788
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HindIII AAGCTT 4 cut(s) 119, 830, 1364, 2541
HpaII CCGG 3 cut(s) 150, 885, 1350
HphI GGTGA 7 cut(s) 16, 133, 689, 899, 1922, 2114, 2386
Hpy166II GTNNAC 9 cut(s) 88, 1195, 1648, 1706, 2075, 2216, 2299, 2702, 2714
Hpy8I GTNNAC 9 cut(s) 88, 1195, 1648, 1706, 2075, 2216, 2299, 2702, 2714
Hpy99I CGWCG 2 cut(s) 32, 659
HpyAV CCTTC 9 cut(s) 157, 178, 273, 584, 896, 2018, 2105, 2167, 2757
HpyCH4III ACNGT 7 cut(s) 131, 1546, 1801, 1870, 1972, 2284, 2530
HpyCH4IV ACGT 2 cut(s) 30, 1708
HpyF3I CTNAG 3 cut(s) 750, 2144, 2262
HpySE526I ACGT 2 cut(s) 30, 1708
Hsp92I GRCGYC 2 cut(s) 138, 189
HspAI GCGC 8 cut(s) 73, 78, 377, 614, 1472, 1639, 1741, 1788
Ksp22I TGATCA 1 cut(s) 2347
Kzo9I GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
LmnI GCTCC 3 cut(s) 367, 1954, 2069
Lsp1109I GCAGC 8 cut(s) 62, 310, 508, 855, 1111, 1237, 1561, 1609
MaeI CTAG 6 cut(s) 716, 812, 1794, 1908, 2198, 2783
MaeII ACGT 2 cut(s) 30, 1708
MaeIII GTNAC 8 cut(s) 139, 468, 847, 1546, 1903, 2392, 2792, 2902
MalI GATC 9 cut(s) 93, 312, 1158, 1302, 1761, 2349, 2440, 2745, 2867
MboI GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
MfeI CAATTG 1 cut(s) 2829
MflI RGATCY 3 cut(s) 1300, 1759, 2438
MhlI GDGCHC 3 cut(s) 1124, 2066, 2428
MlsI TGGCCA 1 cut(s) 972
MluNI TGGCCA 1 cut(s) 972
MlyI GAGTC 8 cut(s) 155, 415, 668, 1093, 1347, 1432, 1582, 2294
MmeI TCCRAC 2 cut(s) 1954, 2034
Mox20I TGGCCA 1 cut(s) 972
Mph1103I ATGCAT 2 cut(s) 607, 1054
MroXI GAANNNNTTC 5 cut(s) 167, 894, 1010, 2003, 2193
MscI TGGCCA 1 cut(s) 972
MseI TTAA 9 cut(s) 1140, 1181, 1206, 1569, 1665, 1847, 2457, 2604, 2855
MslI CAYNNNNRTG 3 cut(s) 441, 914, 1488
Msp20I TGGCCA 1 cut(s) 972
MspA1I CMGCKG 2 cut(s) 301, 521
MspI CCGG 3 cut(s) 150, 885, 1350
MspR9I CCNGG 4 cut(s) 675, 960, 2326, 2679
MteI GCGCNGCGC 1 cut(s) 76
MunI CAATTG 1 cut(s) 2829
MvaI CCWGG 4 cut(s) 675, 960, 2326, 2679
MvnI CGCG 1 cut(s) 1152
NdeI CATATG 2 cut(s) 1176, 1635
NdeII GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
NlaIV GGNNCC 2 cut(s) 558, 946
NmeAIII GCCGAG 2 cut(s) 64, 1474
NmuCI GTSAC 5 cut(s) 139, 468, 1903, 2392, 2902
NsbI TGCGCA 2 cut(s) 378, 1640
NsiI ATGCAT 2 cut(s) 607, 1054
NspI RCATGY 4 cut(s) 73, 1487, 1750, 2237
PaeI GCATGC 1 cut(s) 73
PaeR7I CTCGAG 1 cut(s) 284
PagI TCATGA 2 cut(s) 417, 1983
PceI AGGCCT 1 cut(s) 167
PciI ACATGT 2 cut(s) 1746, 2233
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 186
PdmI GAANNNNTTC 5 cut(s) 167, 894, 1010, 2003, 2193
PflMI CCANNNNNTGG 1 cut(s) 2684
Ple19I CGATCG 1 cut(s) 313
PleI GAGTC 8 cut(s) 154, 415, 667, 1092, 1347, 1432, 1582, 2294
PpsI GAGTC 8 cut(s) 154, 415, 667, 1092, 1347, 1432, 1582, 2294
PpuMI RGGWCCY 1 cut(s) 2410
PscI ACATGT 2 cut(s) 1746, 2233
PsiI TTATAA 1 cut(s) 2466
Psp124BI GAGCTC 3 cut(s) 1124, 2066, 2428
Psp5II RGGWCCY 1 cut(s) 2410
Psp6I CCWGG 4 cut(s) 673, 958, 2324, 2677
PspFI CCCAGC 1 cut(s) 301
PspGI CCWGG 4 cut(s) 673, 958, 2324, 2677
PspN4I GGNNCC 2 cut(s) 558, 946
PspPI GGNCC 5 cut(s) 737, 944, 1818, 2138, 2410
PspPPI RGGWCCY 1 cut(s) 2410
PspXI VCTCGAGB 1 cut(s) 284
PstI CTGCAG 2 cut(s) 1450, 1599
PsuI RGATCY 3 cut(s) 1300, 1759, 2438
PvuI CGATCG 1 cut(s) 313
PvuII CAGCTG 1 cut(s) 301
RsaI GTAC 2 cut(s) 1798, 2238
RsaNI GTAC 2 cut(s) 1797, 2237
RseI CAYNNNNRTG 3 cut(s) 441, 914, 1488
SacI GAGCTC 3 cut(s) 1124, 2066, 2428
SaqAI TTAA 9 cut(s) 1140, 1181, 1206, 1569, 1665, 1847, 2457, 2604, 2855
Sau3AI GATC 9 cut(s) 91, 310, 1156, 1300, 1759, 2347, 2438, 2743, 2865
Sau96I GGNCC 5 cut(s) 737, 944, 1818, 2138, 2410
ScaI AGTACT 1 cut(s) 1798
SchI GAGTC 8 cut(s) 155, 415, 668, 1093, 1347, 1432, 1582, 2294
ScrFI CCNGG 4 cut(s) 675, 960, 2326, 2679
SduI GDGCHC 3 cut(s) 1124, 2066, 2428
SfcI CTRYAG 5 cut(s) 1069, 1446, 1595, 1953, 2526
SfiI GGCCNNNNNGGCC 1 cut(s) 32
Sfr274I CTCGAG 1 cut(s) 284
SinI GGWCC 3 cut(s) 737, 944, 2410
SlaI CTCGAG 1 cut(s) 284
SmiMI CAYNNNNRTG 3 cut(s) 441, 914, 1488
SmlI CTYRAG 4 cut(s) 284, 2405, 2573, 2717
SmoI CTYRAG 4 cut(s) 284, 2405, 2573, 2717
SpeI ACTAGT 1 cut(s) 1907
SphI GCATGC 1 cut(s) 73
SseBI AGGCCT 1 cut(s) 167
SspI AATATT 1 cut(s) 388
SspMI CTAG 6 cut(s) 716, 812, 1794, 1908, 2198, 2783
SstI GAGCTC 3 cut(s) 1124, 2066, 2428
StuI AGGCCT 1 cut(s) 167
StyD4I CCNGG 4 cut(s) 673, 958, 2324, 2677
StyI CCWWGG 2 cut(s) 552, 2067
TaaI ACNGT 7 cut(s) 131, 1546, 1801, 1870, 1972, 2284, 2530
TaiI ACGT 2 cut(s) 33, 1711
TaqI TCGA 8 cut(s) 180, 285, 499, 595, 657, 840, 1019, 2552
TatI WGTACW 2 cut(s) 1796, 2236
TauI GCSGC 6 cut(s) 38, 58, 61, 138, 189, 1886
Tru1I TTAA 9 cut(s) 1140, 1181, 1206, 1569, 1665, 1847, 2457, 2604, 2855
Tru9I TTAA 9 cut(s) 1140, 1181, 1206, 1569, 1665, 1847, 2457, 2604, 2855
TscAI CASTG 5 cut(s) 1655, 1687, 1708, 1836, 2591
TseFI GTSAC 5 cut(s) 139, 468, 1903, 2392, 2902
TseI GCWGC 8 cut(s) 75, 298, 521, 868, 1099, 1250, 1574, 1597
Tsp45I GTSAC 5 cut(s) 139, 468, 1903, 2392, 2902
TspGWI ACGGA 3 cut(s) 225, 738, 2633
TspRI CASTG 5 cut(s) 1655, 1687, 1708, 1836, 2591
Van91I CCANNNNNTGG 1 cut(s) 2684
VpaK11BI GGWCC 3 cut(s) 737, 944, 2410
XapI RAATTY 5 cut(s) 854, 928, 986, 1661, 2193
XceI RCATGY 4 cut(s) 73, 1487, 1750, 2237
XhoI CTCGAG 1 cut(s) 284
XmiI GTMKAC 1 cut(s) 87
XmnI GAANNNNTTC 5 cut(s) 167, 894, 1010, 2003, 2193
XspI CTAG 6 cut(s) 716, 812, 1794, 1908, 2198, 2783
ZrmI AGTACT 1 cut(s) 1798
Zsp2I ATGCAT 2 cut(s) 607, 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.