Cleavage and polyadenylation specificity factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51660 AT5G51660 AT5G51660 AT5G51660 |
| fragaria_vesca | FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 |
| malus_domestica | MD01G1186100.v1.1 |
| prunus_persica | Prupe.2G282700_v2.0.a1 |
| pyrus_communis | pycom01g19770 |
| rosa_chinensis | RchiOBHm_Chr1g0375181 |
| rosa_laevigata | RLG00000026681 |
| rosa_multiflora | Rmu_sc0000554.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00282960 |
| rosa_rugosa | Rorug01G0389000 Rorug01G0389000 |
| rosa_samantha | Rh1AG399600 Rh1CG377800 |
| rosa_wichuraiana | Rw1G035470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 185 |
| AccB1I | GGYRCC | 4 cut(s) | 1973, 2366, 3605, 3932 |
| AccBSI | CCGCTC | 1 cut(s) | 3646 |
| AccI | GTMKAC | 3 cut(s) | 1148, 2759, 3504 |
| AccII | CGCG | 3 cut(s) | 11, 423, 3092 |
| AccIII | TCCGGA | 1 cut(s) | 4065 |
| AclI | AACGTT | 1 cut(s) | 1405 |
| AclWI | GGATC | 5 cut(s) | 560, 573, 2081, 2135, 2923 |
| AcoI | YGGCCR | 3 cut(s) | 2824, 3038, 3181 |
| AcuI | CTGAAG | 5 cut(s) | 782, 2661, 2760, 2997, 3519 |
| AcyI | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| AdeI | CACNNNGTG | 1 cut(s) | 2947 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 155, 374, 965, 1984, 3421 |
| AflII | CTTAAG | 1 cut(s) | 1570 |
| AflIII | ACRYGT | 2 cut(s) | 742, 2754 |
| AhlI | ACTAGT | 4 cut(s) | 646, 1256, 1531, 3163 |
| AjiI | CACGTC | 2 cut(s) | 745, 2757 |
| AjnI | CCWGG | 9 cut(s) | 630, 1118, 1351, 1717, 1956, 2829, 3287, 3822, 3852 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2001, 2033, 3912, 3944 |
| AleI | CACNNNNGTG | 2 cut(s) | 2905, 3930 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 41, 73 |
| Alw21I | GWGCWC | 4 cut(s) | 318, 1027, 1757, 3212 |
| Alw26I | GTCTC | 4 cut(s) | 1201, 1293, 3835, 4083 |
| AlwI | GGATC | 5 cut(s) | 560, 573, 2081, 2135, 2923 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 250, 689 |
| Ama87I | CYCGRG | 2 cut(s) | 311, 693 |
| Aor13HI | TCCGGA | 1 cut(s) | 4065 |
| ApeKI | GCWGC | 8 cut(s) | 1106, 1171, 1340, 1790, 1922, 2690, 3187, 3431 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4013, 4045 |
| AseI | ATTAAT | 2 cut(s) | 915, 1578 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 400, 3387 |
| AsuC2I | CCSGG | 1 cut(s) | 2859 |
| AsuHPI | GGTGA | 6 cut(s) | 61, 1397, 2345, 3065, 3704, 4247 |
| AsuNHI | GCTAGC | 1 cut(s) | 2258 |
| AvaI | CYCGRG | 2 cut(s) | 311, 693 |
| AvaII | GGWCC | 6 cut(s) | 164, 500, 2234, 2318, 3575, 3738 |
| AxyI | CCTNAGG | 1 cut(s) | 470 |
| BaeGI | GKGCMC | 3 cut(s) | 1978, 2371, 3937 |
| BalI | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| BamHI | GGATCC | 1 cut(s) | 565 |
| BanI | GGYRCC | 4 cut(s) | 1973, 2366, 3605, 3932 |
| BanII | GRGCYC | 4 cut(s) | 226, 318, 1757, 3212 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3089, 3121 |
| BauI | CACGAG | 1 cut(s) | 317 |
| BbsI | GAAGAC | 2 cut(s) | 1380, 2440 |
| Bbv12I | GWGCWC | 4 cut(s) | 318, 1027, 1757, 3212 |
| BbvCI | CCTCAGC | 2 cut(s) | 251, 1051 |
| BbvI | GCAGC | 8 cut(s) | 1093, 1158, 1352, 1777, 1909, 2677, 3199, 3418 |
| BceAI | ACGGC | 3 cut(s) | 3124, 3426, 4039 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 35, 69, 1485, 1519, 2348, 2382 |
| BciT130I | CCWGG | 9 cut(s) | 632, 1120, 1353, 1719, 1958, 2831, 3289, 3824, 3854 |
| BciVI | GTATCC | 1 cut(s) | 2753 |
| BclI | TGATCA | 2 cut(s) | 612, 3169 |
| BcnI | CCSGG | 1 cut(s) | 2859 |
| BcoDI | GTCTC | 4 cut(s) | 1201, 1293, 3835, 4083 |
| BcuI | ACTAGT | 4 cut(s) | 646, 1256, 1531, 3163 |
| BfmI | CTRYAG | 6 cut(s) | 95, 1324, 1338, 3537, 3789, 3959 |
| BfrI | CTTAAG | 1 cut(s) | 1570 |
| BfuI | GTATCC | 1 cut(s) | 2753 |
| BglII | AGATCT | 2 cut(s) | 1328, 3275 |
| BlpI | GCTNAGC | 2 cut(s) | 270, 3818 |
| Bme18I | GGWCC | 6 cut(s) | 164, 500, 2234, 2318, 3575, 3738 |
| BmeT110I | CYCGRG | 2 cut(s) | 311, 693 |
| BmgBI | CACGTC | 2 cut(s) | 745, 2757 |
| BmrI | ACTGGG | 3 cut(s) | 890, 1541, 1608 |
| BmtI | GCTAGC | 1 cut(s) | 2262 |
| BmuI | ACTGGG | 3 cut(s) | 890, 1541, 1608 |
| BpiI | GAAGAC | 2 cut(s) | 1380, 2440 |
| BpmI | CTGGAG | 3 cut(s) | 696, 3996, 4067 |
| Bpu10I | CCTNAGC | 4 cut(s) | 251, 1051, 2249, 2720 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 270, 3818 |
| BpuMI | CCSGG | 1 cut(s) | 2859 |
| Bsa29I | ATCGAT | 1 cut(s) | 3994 |
| BsaAI | YACGTR | 1 cut(s) | 2741 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1806 |
| BsaHI | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| BsaWI | WCCGGW | 4 cut(s) | 1690, 2045, 3127, 4065 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 155, 374, 965, 1984, 3421 |
| Bse118I | RCCGGY | 2 cut(s) | 38, 1290 |
| Bse1I | ACTGG | 6 cut(s) | 896, 1314, 1547, 1603, 3041, 4053 |
| Bse21I | CCTNAGG | 1 cut(s) | 470 |
| Bse3DI | GCAATG | 1 cut(s) | 4038 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1806 |
| BseAI | TCCGGA | 1 cut(s) | 4065 |
| BseBI | CCWGG | 9 cut(s) | 632, 1120, 1353, 1719, 1958, 2831, 3289, 3824, 3854 |
| BseCI | ATCGAT | 1 cut(s) | 3994 |
| BseJI | GATNNNNATC | 1 cut(s) | 1806 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 155, 374, 965, 1984, 3421 |
| BseMI | GCAATG | 1 cut(s) | 4038 |
| BseMII | CTCAG | 8 cut(s) | 126, 242, 257, 1065, 1695, 1875, 3225, 3336 |
| BseNI | ACTGG | 6 cut(s) | 896, 1314, 1547, 1603, 3041, 4053 |
| BseRI | GAGGAG | 2 cut(s) | 1039, 1466 |
| BseSI | GKGCMC | 3 cut(s) | 1978, 2371, 3937 |
| BseXI | GCAGC | 8 cut(s) | 1093, 1158, 1352, 1777, 1909, 2677, 3199, 3418 |
| BseYI | CCCAGC | 1 cut(s) | 821 |
| BsgI | GTGCAG | 1 cut(s) | 3065 |
| Bsh1236I | CGCG | 3 cut(s) | 11, 423, 3092 |
| Bsh1285I | CGRYCG | 1 cut(s) | 963 |
| BshNI | GGYRCC | 4 cut(s) | 1973, 2366, 3605, 3932 |
| BshVI | ATCGAT | 1 cut(s) | 3994 |
| BsiEI | CGRYCG | 1 cut(s) | 963 |
| BsiHKAI | GWGCWC | 4 cut(s) | 318, 1027, 1757, 3212 |
| BsiHKCI | CYCGRG | 2 cut(s) | 311, 693 |
| BsiSI | CCGG | 8 cut(s) | 39, 60, 1291, 1691, 2046, 2858, 3128, 4066 |
| BslFI | GGGAC | 6 cut(s) | 694, 2620, 2785, 3415, 3724, 4279 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 155, 374, 965, 1984, 3421 |
| BsmAI | GTCTC | 4 cut(s) | 1201, 1293, 3835, 4083 |
| BsmFI | GGGAC | 6 cut(s) | 694, 2620, 2785, 3415, 3724, 4279 |
| BsmI | GAATGC | 1 cut(s) | 3367 |
| BsoBI | CYCGRG | 2 cut(s) | 311, 693 |
| Bsp1286I | GDGCHC | 8 cut(s) | 226, 318, 1027, 1757, 1978, 2371, 3212, 3937 |
| Bsp13I | TCCGGA | 1 cut(s) | 4065 |
| Bsp1407I | TGTACA | 2 cut(s) | 210, 1201 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 270, 3818 |
| Bsp19I | CCATGG | 2 cut(s) | 1111, 2243 |
| Bsp68I | TCGCGA | 1 cut(s) | 423 |
| BspCNI | CTCAG | 8 cut(s) | 127, 243, 256, 1064, 1696, 1876, 3224, 3335 |
| BspDI | ATCGAT | 1 cut(s) | 3994 |
| BspEI | TCCGGA | 1 cut(s) | 4065 |
| BspFNI | CGCG | 3 cut(s) | 11, 423, 3092 |
| BspHI | TCATGA | 2 cut(s) | 118, 2461 |
| BspMAI | CTGCAG | 2 cut(s) | 1342, 3963 |
| BspOI | GCTAGC | 1 cut(s) | 2262 |
| BspPI | GGATC | 5 cut(s) | 560, 573, 2081, 2135, 2923 |
| BspQI | GCTCTTC | 1 cut(s) | 801 |
| BspT107I | GGYRCC | 4 cut(s) | 1973, 2366, 3605, 3932 |
| BspTI | CTTAAG | 1 cut(s) | 1570 |
| BsrBI | CCGCTC | 1 cut(s) | 3646 |
| BsrDI | GCAATG | 1 cut(s) | 4038 |
| BsrFI | RCCGGY | 2 cut(s) | 38, 1290 |
| BsrGI | TGTACA | 2 cut(s) | 210, 1201 |
| BsrI | ACTGG | 6 cut(s) | 896, 1314, 1547, 1603, 3041, 4053 |
| BssAI | RCCGGY | 2 cut(s) | 38, 1290 |
| BssNI | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| BssSI | CACGAG | 1 cut(s) | 317 |
| BssT1I | CCWWGG | 4 cut(s) | 1111, 2243, 2748, 3415 |
| Bst2BI | CACGAG | 1 cut(s) | 317 |
| Bst2UI | CCWGG | 9 cut(s) | 632, 1120, 1353, 1719, 1958, 2831, 3289, 3824, 3854 |
| Bst6I | CTCTTC | 3 cut(s) | 391, 523, 801 |
| BstACI | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| BstAFI | CTTAAG | 1 cut(s) | 1570 |
| BstAUI | TGTACA | 2 cut(s) | 210, 1201 |
| BstBAI | YACGTR | 1 cut(s) | 2741 |
| BstDSI | CCRYGG | 3 cut(s) | 1111, 1759, 2243 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 153, 372 |
| BstFNI | CGCG | 3 cut(s) | 11, 423, 3092 |
| BstMAI | GTCTC | 4 cut(s) | 1201, 1293, 3835, 4083 |
| BstMCI | CGRYCG | 1 cut(s) | 963 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 271, 582, 1022, 1052, 2597, 3533 |
| BstNI | CCWGG | 9 cut(s) | 632, 1120, 1353, 1719, 1958, 2831, 3289, 3824, 3854 |
| BstNSI | RCATGY | 1 cut(s) | 3332 |
| BstSFI | CTRYAG | 6 cut(s) | 95, 1324, 1338, 3537, 3789, 3959 |
| BstSLI | GKGCMC | 3 cut(s) | 1978, 2371, 3937 |
| BstSNI | TACGTA | 1 cut(s) | 2741 |
| BstUI | CGCG | 3 cut(s) | 11, 423, 3092 |
| BstV1I | GCAGC | 8 cut(s) | 1093, 1158, 1352, 1777, 1909, 2677, 3199, 3418 |
| BstV2I | GAAGAC | 2 cut(s) | 1380, 2440 |
| BstX2I | RGATCY | 4 cut(s) | 565, 1328, 2140, 3275 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 903, 2244 |
| BstYI | RGATCY | 4 cut(s) | 565, 1328, 2140, 3275 |
| Bsu15I | ATCGAT | 1 cut(s) | 3994 |
| Bsu36I | CCTNAGG | 1 cut(s) | 470 |
| BsuI | GTATCC | 1 cut(s) | 2753 |
| BsuTUI | ATCGAT | 1 cut(s) | 3994 |
| BtgI | CCRYGG | 3 cut(s) | 1111, 1759, 2243 |
| BtrI | CACGTC | 2 cut(s) | 745, 2757 |
| BtsI | GCAGTG | 1 cut(s) | 1524 |
| BtuMI | TCGCGA | 1 cut(s) | 423 |
| CaiI | CAGNNNCTG | 2 cut(s) | 250, 689 |
| CciI | TCATGA | 2 cut(s) | 118, 2461 |
| Cfr10I | RCCGGY | 2 cut(s) | 38, 1290 |
| ClaI | ATCGAT | 1 cut(s) | 3994 |
| CseI | GACGC | 4 cut(s) | 31, 434, 1934, 2445 |
| DraI | TTTAAA | 1 cut(s) | 2697 |
| DraIII | CACNNNGTG | 1 cut(s) | 2947 |
| EaeI | YGGCCR | 3 cut(s) | 2824, 3038, 3181 |
| Eam1104I | CTCTTC | 3 cut(s) | 391, 523, 801 |
| EarI | CTCTTC | 3 cut(s) | 391, 523, 801 |
| EciI | GGCGGA | 2 cut(s) | 3630, 3932 |
| Ecl136II | GAGCTC | 3 cut(s) | 316, 1755, 3210 |
| Eco105I | TACGTA | 1 cut(s) | 2741 |
| Eco130I | CCWWGG | 4 cut(s) | 1111, 2243, 2748, 3415 |
| Eco24I | GRGCYC | 4 cut(s) | 226, 318, 1757, 3212 |
| Eco32I | GATATC | 2 cut(s) | 1125, 2205 |
| Eco47I | GGWCC | 6 cut(s) | 164, 500, 2234, 2318, 3575, 3738 |
| Eco53kI | GAGCTC | 3 cut(s) | 316, 1755, 3210 |
| Eco57I | CTGAAG | 5 cut(s) | 782, 2661, 2760, 2997, 3519 |
| Eco81I | CCTNAGG | 1 cut(s) | 470 |
| Eco88I | CYCGRG | 2 cut(s) | 311, 693 |
| EcoICRI | GAGCTC | 3 cut(s) | 316, 1755, 3210 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 153, 372 |
| EcoO109I | RGGNCCY | 2 cut(s) | 548, 3738 |
| EcoRII | CCWGG | 9 cut(s) | 630, 1118, 1351, 1717, 1956, 2829, 3287, 3822, 3852 |
| EcoRV | GATATC | 2 cut(s) | 1125, 2205 |
| EcoT14I | CCWWGG | 4 cut(s) | 1111, 2243, 2748, 3415 |
| EcoT22I | ATGCAT | 2 cut(s) | 30, 489 |
| EcoT38I | GRGCYC | 4 cut(s) | 226, 318, 1757, 3212 |
| ErhI | CCWWGG | 4 cut(s) | 1111, 2243, 2748, 3415 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 520, 552, 535, 567 |
| FaqI | GGGAC | 6 cut(s) | 694, 2620, 2785, 3415, 3724, 4279 |
| FauI | CCCGC | 2 cut(s) | 3117, 4111 |
| FauNDI | CATATG | 1 cut(s) | 2092 |
| FbaI | TGATCA | 2 cut(s) | 612, 3169 |
| FblI | GTMKAC | 3 cut(s) | 1148, 2759, 3504 |
| FriOI | GRGCYC | 4 cut(s) | 226, 318, 1757, 3212 |
| GsaI | CCCAGC | 1 cut(s) | 825 |
| GsuI | CTGGAG | 3 cut(s) | 696, 3996, 4067 |
| HapII | CCGG | 8 cut(s) | 39, 60, 1291, 1691, 2046, 2858, 3128, 4066 |
| HgaI | GACGC | 4 cut(s) | 31, 434, 1934, 2445 |
| Hin1I | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| HincII | GTYRAC | 3 cut(s) | 1149, 1894, 4195 |
| HindII | GTYRAC | 3 cut(s) | 1149, 1894, 4195 |
| HindIII | AAGCTT | 3 cut(s) | 263, 2014, 2717 |
| HpaII | CCGG | 8 cut(s) | 39, 60, 1291, 1691, 2046, 2858, 3128, 4066 |
| HphI | GGTGA | 6 cut(s) | 61, 1397, 2345, 3065, 3704, 4247 |
| Hpy166II | GTNNAC | 9 cut(s) | 211, 1149, 1307, 1894, 2318, 2760, 3505, 3700, 4195 |
| Hpy8I | GTNNAC | 9 cut(s) | 211, 1149, 1307, 1894, 2318, 2760, 3505, 3700, 4195 |
| Hpy99I | CGWCG | 6 cut(s) | 47, 182, 428, 1950, 2915, 4173 |
| HpyCH4IV | ACGT | 8 cut(s) | 177, 744, 1405, 2740, 2756, 3489, 3927, 3955 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 271, 582, 1022, 1052, 2597, 3533 |
| HpySE526I | ACGT | 8 cut(s) | 177, 744, 1405, 2740, 2756, 3489, 3927, 3955 |
| Hsp92I | GRCGYC | 4 cut(s) | 42, 426, 1945, 2437 |
| KflI | GGGWCCC | 1 cut(s) | 3738 |
| Kpn2I | TCCGGA | 1 cut(s) | 4065 |
| Ksp22I | TGATCA | 2 cut(s) | 612, 3169 |
| LguI | GCTCTTC | 1 cut(s) | 801 |
| LmnI | GCTCC | 9 cut(s) | 247, 1096, 1453, 1760, 2021, 3514, 3643, 3977, 4048 |
| Lsp1109I | GCAGC | 8 cut(s) | 1093, 1158, 1352, 1777, 1909, 2677, 3199, 3418 |
| MaeII | ACGT | 8 cut(s) | 177, 744, 1405, 2740, 2756, 3489, 3927, 3955 |
| MbiI | CCGCTC | 1 cut(s) | 3646 |
| MfeI | CAATTG | 5 cut(s) | 354, 1440, 1917, 2398, 2919 |
| MflI | RGATCY | 4 cut(s) | 565, 1328, 2140, 3275 |
| MhlI | GDGCHC | 8 cut(s) | 226, 318, 1027, 1757, 1978, 2371, 3212, 3937 |
| MlsI | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| MluNI | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| MlyI | GAGTC | 3 cut(s) | 359, 542, 1171 |
| MmeI | TCCRAC | 6 cut(s) | 631, 1243, 2116, 2269, 3247, 4291 |
| Mox20I | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| Mph1103I | ATGCAT | 2 cut(s) | 30, 489 |
| MroI | TCCGGA | 1 cut(s) | 4065 |
| MroXI | GAANNNNTTC | 2 cut(s) | 400, 3387 |
| MscI | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| MslI | CAYNNNNRTG | 3 cut(s) | 342, 2905, 3930 |
| Msp20I | TGGCCA | 3 cut(s) | 2826, 3040, 3183 |
| MspA1I | CMGCKG | 4 cut(s) | 1055, 2905, 3112, 3536 |
| MspCI | CTTAAG | 1 cut(s) | 1570 |
| MspI | CCGG | 8 cut(s) | 39, 60, 1291, 1691, 2046, 2858, 3128, 4066 |
| MunI | CAATTG | 5 cut(s) | 354, 1440, 1917, 2398, 2919 |
| Mva1269I | GAATGC | 1 cut(s) | 3367 |
| MvaI | CCWGG | 9 cut(s) | 632, 1120, 1353, 1719, 1958, 2831, 3289, 3824, 3854 |
| MvnI | CGCG | 3 cut(s) | 11, 423, 3092 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 271, 582, 1022, 1052, 2597, 3533 |
| NciI | CCSGG | 1 cut(s) | 2859 |
| NcoI | CCATGG | 2 cut(s) | 1111, 2243 |
| NdeI | CATATG | 1 cut(s) | 2092 |
| NheI | GCTAGC | 1 cut(s) | 2258 |
| NmuCI | GTSAC | 5 cut(s) | 1879, 2333, 2974, 3349, 4057 |
| NruI | TCGCGA | 1 cut(s) | 423 |
| NsiI | ATGCAT | 2 cut(s) | 30, 489 |
| NspI | RCATGY | 1 cut(s) | 3332 |
| OliI | CACNNNNGTG | 2 cut(s) | 2905, 3930 |
| PaeR7I | CTCGAG | 2 cut(s) | 311, 693 |
| PagI | TCATGA | 2 cut(s) | 118, 2461 |
| PasI | CCCWGGG | 1 cut(s) | 3288 |
| PciSI | GCTCTTC | 1 cut(s) | 801 |
| PctI | GAATGC | 1 cut(s) | 3367 |
| PdmI | GAANNNNTTC | 2 cut(s) | 400, 3387 |
| Ple19I | CGATCG | 1 cut(s) | 963 |
| PleI | GAGTC | 3 cut(s) | 358, 541, 1171 |
| PpsI | GAGTC | 3 cut(s) | 358, 541, 1171 |
| Ppu21I | YACGTR | 1 cut(s) | 2741 |
| PpuMI | RGGWCCY | 1 cut(s) | 3738 |
| PshBI | ATTAAT | 2 cut(s) | 915, 1578 |
| PsiI | TTATAA | 1 cut(s) | 185 |
| Psp124BI | GAGCTC | 3 cut(s) | 318, 1757, 3212 |
| Psp1406I | AACGTT | 1 cut(s) | 1405 |
| Psp5II | RGGWCCY | 1 cut(s) | 3738 |
| Psp6I | CCWGG | 9 cut(s) | 630, 1118, 1351, 1717, 1956, 2829, 3287, 3822, 3852 |
| PspFI | CCCAGC | 1 cut(s) | 821 |
| PspGI | CCWGG | 9 cut(s) | 630, 1118, 1351, 1717, 1956, 2829, 3287, 3822, 3852 |
| PspPPI | RGGWCCY | 1 cut(s) | 3738 |
| PspXI | VCTCGAGB | 1 cut(s) | 693 |
| PstI | CTGCAG | 2 cut(s) | 1342, 3963 |
| PstNI | CAGNNNCTG | 2 cut(s) | 250, 689 |
| PsuI | RGATCY | 4 cut(s) | 565, 1328, 2140, 3275 |
| PvuI | CGATCG | 1 cut(s) | 963 |
| PvuII | CAGCTG | 3 cut(s) | 1055, 2905, 3536 |
| RruI | TCGCGA | 1 cut(s) | 423 |
| RseI | CAYNNNNRTG | 3 cut(s) | 342, 2905, 3930 |
| SacI | GAGCTC | 3 cut(s) | 318, 1757, 3212 |
| SalI | GTCGAC | 1 cut(s) | 1147 |
| SapI | GCTCTTC | 1 cut(s) | 801 |
| SchI | GAGTC | 3 cut(s) | 359, 542, 1171 |
| SduI | GDGCHC | 8 cut(s) | 226, 318, 1027, 1757, 1978, 2371, 3212, 3937 |
| SfcI | CTRYAG | 6 cut(s) | 95, 1324, 1338, 3537, 3789, 3959 |
| Sfr274I | CTCGAG | 2 cut(s) | 311, 693 |
| SinI | GGWCC | 6 cut(s) | 164, 500, 2234, 2318, 3575, 3738 |
| SlaI | CTCGAG | 2 cut(s) | 311, 693 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 342, 2905, 3930 |
| SnaBI | TACGTA | 1 cut(s) | 2741 |
| SpeI | ACTAGT | 4 cut(s) | 646, 1256, 1531, 3163 |
| SspI | AATATT | 1 cut(s) | 2818 |
| SstI | GAGCTC | 3 cut(s) | 318, 1757, 3212 |
| StyI | CCWWGG | 4 cut(s) | 1111, 2243, 2748, 3415 |
| TaiI | ACGT | 8 cut(s) | 180, 747, 1408, 2743, 2759, 3492, 3930, 3958 |
| TatI | WGTACW | 4 cut(s) | 210, 1201, 2179, 2213 |
| TauI | GCSGC | 5 cut(s) | 14, 194, 588, 2927, 3646 |
| TseFI | GTSAC | 5 cut(s) | 1879, 2333, 2974, 3349, 4057 |
| TseI | GCWGC | 8 cut(s) | 1106, 1171, 1340, 1790, 1922, 2690, 3187, 3431 |
| Tsp45I | GTSAC | 5 cut(s) | 1879, 2333, 2974, 3349, 4057 |
| TspGWI | ACGGA | 4 cut(s) | 103, 2928, 3241, 4130 |
| Vha464I | CTTAAG | 1 cut(s) | 1570 |
| VpaK11BI | GGWCC | 6 cut(s) | 164, 500, 2234, 2318, 3575, 3738 |
| VspI | ATTAAT | 2 cut(s) | 915, 1578 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 153, 372 |
| XbaI | TCTAGA | 1 cut(s) | 4018 |
| XceI | RCATGY | 1 cut(s) | 3332 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 638, 1439 |
| XhoI | CTCGAG | 2 cut(s) | 311, 693 |
| XmiI | GTMKAC | 3 cut(s) | 1148, 2759, 3504 |
| XmnI | GAANNNNTTC | 2 cut(s) | 400, 3387 |
| Zsp2I | ATGCAT | 2 cut(s) | 30, 489 |