Cleavage and polyadenylation specificity factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51660 AT5G51660 AT5G51660 AT5G51660 |
| fragaria_vesca | FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 |
| malus_domestica | MD01G1186100.v1.1 |
| prunus_persica | Prupe.2G282700_v2.0.a1 |
| pyrus_communis | pycom01g19770 |
| rosa_chinensis | RchiOBHm_Chr1g0375181 |
| rosa_laevigata | RLG00000026681 |
| rosa_multiflora | Rmu_sc0000554.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00282960 |
| rosa_rugosa | Rorug01G0389000 Rorug01G0389000 |
| rosa_samantha | Rh1AG399600 Rh1CG377800 |
| rosa_wichuraiana | Rw1G035470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1826 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 179 |
| Acc36I | ACCTGC | 1 cut(s) | 1948 |
| Acc65I | GGTACC | 2 cut(s) | 3956, 4064 |
| AccB1I | GGYRCC | 4 cut(s) | 236, 3548, 3956, 4064 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 962, 3514 |
| AccBSI | CCGCTC | 1 cut(s) | 802 |
| AccI | GTMKAC | 3 cut(s) | 1145, 1893, 2911 |
| AccII | CGCG | 2 cut(s) | 11, 148 |
| AccIII | TCCGGA | 1 cut(s) | 2250 |
| AciI | CCGC | 9 cut(s) | 11, 186, 356, 802, 2364, 3035, 3134, 3979, 4192 |
| AclWI | GGATC | 4 cut(s) | 557, 2081, 2135, 2471 |
| AcoI | YGGCCR | 5 cut(s) | 32, 2518, 3062, 3205, 3780 |
| AcuI | CTGAAG | 3 cut(s) | 240, 1215, 2526 |
| AcvI | CACGTG | 1 cut(s) | 1760 |
| AcyI | GRCGYC | 2 cut(s) | 291, 1945 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 272, 819, 962, 3086, 3514, 4074 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 127 |
| AjnI | CCWGG | 6 cut(s) | 812, 1717, 2520, 2738, 4068, 4225 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3328, 3360 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4309, 4341 |
| Alw21I | GWGCWC | 8 cut(s) | 315, 1458, 1663, 1978, 2060, 2156, 2192, 3766 |
| Alw26I | GTCTC | 8 cut(s) | 284, 298, 832, 1198, 2323, 2457, 2663, 2801 |
| Alw44I | GTGCAC | 1 cut(s) | 2152 |
| AlwI | GGATC | 4 cut(s) | 557, 2081, 2135, 2471 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2672, 2699 |
| Ama87I | CYCGRG | 1 cut(s) | 125 |
| Aor13HI | TCCGGA | 1 cut(s) | 2250 |
| ApaI | GGGCCC | 1 cut(s) | 500 |
| ApaLI | GTGCAC | 1 cut(s) | 2152 |
| ApeKI | GCWGC | 5 cut(s) | 886, 1722, 1790, 1922, 2177 |
| AseI | ATTAAT | 3 cut(s) | 1536, 1578, 2456 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 397, 1556 |
| Asp718I | GGTACC | 2 cut(s) | 3956, 4064 |
| AspA2I | CCTAGG | 1 cut(s) | 248 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| AsuC2I | CCSGG | 3 cut(s) | 190, 2872, 4026 |
| AsuHPI | GGTGA | 6 cut(s) | 175, 1078, 1394, 2345, 3728, 4151 |
| AvaI | CYCGRG | 1 cut(s) | 125 |
| AvaII | GGWCC | 5 cut(s) | 121, 1544, 2234, 2663, 4017 |
| AvrII | CCTAGG | 1 cut(s) | 248 |
| BaeGI | GKGCMC | 3 cut(s) | 500, 2156, 2391 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3948, 3981 |
| BalI | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| BanI | GGYRCC | 4 cut(s) | 236, 3548, 3956, 4064 |
| BanII | GRGCYC | 9 cut(s) | 315, 500, 1337, 1458, 2060, 2192, 2991, 3766, 4031 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3113, 3145 |
| BbrPI | CACGTG | 1 cut(s) | 1760 |
| BbsI | GAAGAC | 1 cut(s) | 2261 |
| Bbv12I | GWGCWC | 8 cut(s) | 315, 1458, 1663, 1978, 2060, 2156, 2192, 3766 |
| BbvI | GCAGC | 5 cut(s) | 898, 1709, 1777, 1909, 2164 |
| BceAI | ACGGC | 3 cut(s) | 304, 2580, 2936 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1793, 1827 |
| BciT130I | CCWGG | 6 cut(s) | 814, 1719, 2522, 2740, 4070, 4227 |
| BciVI | GTATCC | 1 cut(s) | 2132 |
| BclI | TGATCA | 3 cut(s) | 2326, 2490, 3193 |
| BcnI | CCSGG | 3 cut(s) | 190, 2872, 4026 |
| BcoDI | GTCTC | 8 cut(s) | 284, 298, 832, 1198, 2323, 2457, 2663, 2801 |
| BfaI | CTAG | 5 cut(s) | 249, 366, 440, 474, 1080 |
| BfmI | CTRYAG | 1 cut(s) | 1923 |
| BfuAI | ACCTGC | 1 cut(s) | 1948 |
| BfuI | GTATCC | 1 cut(s) | 2132 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1394 |
| BglII | AGATCT | 1 cut(s) | 1076 |
| BisI | GCNGC | 7 cut(s) | 12, 887, 1723, 1791, 1923, 2178, 3035 |
| BlnI | CCTAGG | 1 cut(s) | 248 |
| BlpI | GCTNAGC | 1 cut(s) | 3842 |
| BlsI | GCNGC | 7 cut(s) | 13, 888, 1724, 1792, 1924, 2179, 3036 |
| BmcAI | AGTACT | 2 cut(s) | 1236, 2263 |
| Bme1390I | CCNGG | 9 cut(s) | 190, 814, 1719, 2522, 2740, 2872, 4026, 4070, 4227 |
| Bme18I | GGWCC | 5 cut(s) | 121, 1544, 2234, 2663, 4017 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 1 cut(s) | 125 |
| BmrFI | CCNGG | 9 cut(s) | 190, 814, 1719, 2522, 2740, 2872, 4026, 4070, 4227 |
| BpiI | GAAGAC | 1 cut(s) | 2261 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 1442, 1474, 2660, 2692, 3515, 3547, 3753, 3785 |
| BpmI | CTGGAG | 3 cut(s) | 693, 1176, 1853 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2238 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3842 |
| BpuEI | CTTGAG | 4 cut(s) | 329, 552, 3250, 3919 |
| BpuMI | CCSGG | 3 cut(s) | 190, 2872, 4026 |
| Bsa29I | ATCGAT | 1 cut(s) | 2201 |
| BsaAI | YACGTR | 1 cut(s) | 1760 |
| BsaBI | GATNNNNATC | 1 cut(s) | 788 |
| BsaHI | GRCGYC | 2 cut(s) | 291, 1945 |
| BsaI | GGTCTC | 2 cut(s) | 284, 2457 |
| BsaWI | WCCGGW | 1 cut(s) | 2250 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 272, 819, 962, 3086, 3514, 4074 |
| Bse1I | ACTGG | 8 cut(s) | 35, 1006, 1159, 1603, 1632, 2719, 3065, 4195 |
| Bse3DI | GCAATG | 2 cut(s) | 1427, 2841 |
| Bse8I | GATNNNNATC | 1 cut(s) | 788 |
| BseAI | TCCGGA | 1 cut(s) | 2250 |
| BseBI | CCWGG | 6 cut(s) | 814, 1719, 2522, 2740, 4070, 4227 |
| BseCI | ATCGAT | 1 cut(s) | 2201 |
| BseGI | GGATG | 7 cut(s) | 889, 1366, 2634, 2920, 3454, 4078, 4156 |
| BseJI | GATNNNNATC | 1 cut(s) | 788 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 272, 819, 962, 3086, 3514, 4074 |
| BseMI | GCAATG | 2 cut(s) | 1427, 2841 |
| BseNI | ACTGG | 8 cut(s) | 35, 1006, 1159, 1603, 1632, 2719, 3065, 4195 |
| BseRI | GAGGAG | 2 cut(s) | 1466, 3084 |
| BseSI | GKGCMC | 3 cut(s) | 500, 2156, 2391 |
| BseXI | GCAGC | 5 cut(s) | 898, 1709, 1777, 1909, 2164 |
| BseYI | CCCAGC | 2 cut(s) | 818, 3455 |
| BsgI | GTGCAG | 5 cut(s) | 843, 1220, 1331, 1976, 2197 |
| Bsh1236I | CGCG | 2 cut(s) | 11, 148 |
| BshNI | GGYRCC | 4 cut(s) | 236, 3548, 3956, 4064 |
| BshVI | ATCGAT | 1 cut(s) | 2201 |
| BsiHKAI | GWGCWC | 8 cut(s) | 315, 1458, 1663, 1978, 2060, 2156, 2192, 3766 |
| BsiHKCI | CYCGRG | 1 cut(s) | 125 |
| BsiSI | CCGG | 7 cut(s) | 189, 2125, 2251, 2527, 2871, 3293, 4025 |
| BslFI | GGGAC | 7 cut(s) | 1310, 1538, 2598, 2753, 3439, 4030, 4330 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 272, 819, 962, 3086, 3514, 4074 |
| BsmAI | GTCTC | 8 cut(s) | 284, 298, 832, 1198, 2323, 2457, 2663, 2801 |
| BsmBI | CGTCTC | 1 cut(s) | 298 |
| BsmFI | GGGAC | 7 cut(s) | 1310, 1538, 2598, 2753, 3439, 4030, 4330 |
| BsmI | GAATGC | 4 cut(s) | 585, 1759, 2169, 2916 |
| Bso31I | GGTCTC | 2 cut(s) | 284, 2457 |
| BsoBI | CYCGRG | 1 cut(s) | 125 |
| Bsp120I | GGGCCC | 1 cut(s) | 496 |
| Bsp13I | TCCGGA | 1 cut(s) | 2250 |
| Bsp143I | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3842 |
| Bsp19I | CCATGG | 2 cut(s) | 2243, 2983 |
| BspACI | CCGC | 9 cut(s) | 11, 186, 356, 802, 2364, 3035, 3134, 3979, 4192 |
| BspDI | ATCGAT | 1 cut(s) | 2201 |
| BspEI | TCCGGA | 1 cut(s) | 2250 |
| BspFNI | CGCG | 2 cut(s) | 11, 148 |
| BspHI | TCATGA | 2 cut(s) | 796, 2224 |
| BspMAI | CTGCAG | 1 cut(s) | 1927 |
| BspMI | ACCTGC | 1 cut(s) | 1948 |
| BspPI | GGATC | 4 cut(s) | 557, 2081, 2135, 2471 |
| BspT107I | GGYRCC | 4 cut(s) | 236, 3548, 3956, 4064 |
| BspTNI | GGTCTC | 2 cut(s) | 284, 2457 |
| BsrBI | CCGCTC | 1 cut(s) | 802 |
| BsrDI | GCAATG | 2 cut(s) | 1427, 2841 |
| BsrI | ACTGG | 8 cut(s) | 35, 1006, 1159, 1603, 1632, 2719, 3065, 4195 |
| BssMI | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| BssNI | GRCGYC | 2 cut(s) | 291, 1945 |
| BssT1I | CCWWGG | 7 cut(s) | 248, 2243, 2772, 2983, 3311, 3513, 3783 |
| Bst2UI | CCWGG | 6 cut(s) | 814, 1719, 2522, 2740, 4070, 4227 |
| Bst6I | CTCTTC | 3 cut(s) | 388, 514, 1783 |
| BstACI | GRCGYC | 2 cut(s) | 291, 1945 |
| BstBAI | YACGTR | 1 cut(s) | 1760 |
| BstC8I | GCNNGC | 3 cut(s) | 2212, 2565, 2848 |
| BstDSI | CCRYGG | 3 cut(s) | 1089, 2243, 2983 |
| BstEII | GGTNACC | 1 cut(s) | 3794 |
| BstF5I | GGATG | 7 cut(s) | 889, 1366, 2634, 2920, 3454, 4078, 4156 |
| BstFNI | CGCG | 2 cut(s) | 11, 148 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstKTI | GATC | 9 cut(s) | 565, 1079, 1867, 2089, 2143, 2329, 2479, 2493, 3196 |
| BstMAI | GTCTC | 8 cut(s) | 284, 298, 832, 1198, 2323, 2457, 2663, 2801 |
| BstMBI | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 145, 243, 1019, 1049, 1168, 1394, 1493, 2569, 3557 |
| BstNI | CCWGG | 6 cut(s) | 814, 1719, 2522, 2740, 4070, 4227 |
| BstNSI | RCATGY | 1 cut(s) | 743 |
| BstPI | GGTNACC | 1 cut(s) | 3794 |
| BstSCI | CCNGG | 9 cut(s) | 188, 812, 1717, 2520, 2738, 2870, 4024, 4068, 4225 |
| BstSFI | CTRYAG | 1 cut(s) | 1923 |
| BstSLI | GKGCMC | 3 cut(s) | 500, 2156, 2391 |
| BstUI | CGCG | 2 cut(s) | 11, 148 |
| BstV1I | GCAGC | 5 cut(s) | 898, 1709, 1777, 1909, 2164 |
| BstV2I | GAAGAC | 1 cut(s) | 2261 |
| BstX2I | RGATCY | 3 cut(s) | 1076, 2140, 2476 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4169 |
| BstYI | RGATCY | 3 cut(s) | 1076, 2140, 2476 |
| Bsu15I | ATCGAT | 1 cut(s) | 2201 |
| BsuI | GTATCC | 1 cut(s) | 2132 |
| BsuTUI | ATCGAT | 1 cut(s) | 2201 |
| BtgI | CCRYGG | 3 cut(s) | 1089, 2243, 2983 |
| BtsCI | GGATG | 7 cut(s) | 889, 1366, 2634, 2920, 3454, 4078, 4156 |
| BtsI | GCAGTG | 1 cut(s) | 1101 |
| BtsIMutI | CAGTG | 9 cut(s) | 28, 484, 1101, 1344, 2070, 2154, 2216, 2955, 3164 |
| BveI | ACCTGC | 1 cut(s) | 1948 |
| Cac8I | GCNNGC | 3 cut(s) | 2212, 2565, 2848 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2672, 2699 |
| CciI | TCATGA | 2 cut(s) | 796, 2224 |
| CfoI | GCGC | 1 cut(s) | 150 |
| ClaI | ATCGAT | 1 cut(s) | 2201 |
| CseI | GACGC | 2 cut(s) | 280, 1934 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 256, 291, 2269, 2304, 3286, 3321 |
| DpnI | GATC | 9 cut(s) | 564, 1078, 1866, 2088, 2142, 2328, 2478, 2492, 3195 |
| DpnII | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 179 |
| DriI | GACNNNNNGTC | 1 cut(s) | 127 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 179 |
| EaeI | YGGCCR | 5 cut(s) | 32, 2518, 3062, 3205, 3780 |
| Eam1104I | CTCTTC | 3 cut(s) | 388, 514, 1783 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 127 |
| EarI | CTCTTC | 3 cut(s) | 388, 514, 1783 |
| EciI | GGCGGA | 1 cut(s) | 4181 |
| Ecl136II | GAGCTC | 5 cut(s) | 313, 1456, 2058, 2190, 3764 |
| Eco130I | CCWWGG | 7 cut(s) | 248, 2243, 2772, 2983, 3311, 3513, 3783 |
| Eco24I | GRGCYC | 9 cut(s) | 315, 500, 1337, 1458, 2060, 2192, 2991, 3766, 4031 |
| Eco31I | GGTCTC | 2 cut(s) | 284, 2457 |
| Eco32I | GATATC | 1 cut(s) | 2205 |
| Eco47I | GGWCC | 5 cut(s) | 121, 1544, 2234, 2663, 4017 |
| Eco53kI | GAGCTC | 5 cut(s) | 313, 1456, 2058, 2190, 3764 |
| Eco57I | CTGAAG | 3 cut(s) | 240, 1215, 2526 |
| Eco72I | CACGTG | 1 cut(s) | 1760 |
| Eco88I | CYCGRG | 1 cut(s) | 125 |
| Eco91I | GGTNACC | 1 cut(s) | 3794 |
| EcoICRI | GAGCTC | 5 cut(s) | 313, 1456, 2058, 2190, 3764 |
| EcoO109I | RGGNCCY | 4 cut(s) | 121, 245, 496, 2234 |
| EcoO65I | GGTNACC | 1 cut(s) | 3794 |
| EcoRI | GAATTC | 1 cut(s) | 99 |
| EcoRII | CCWGG | 6 cut(s) | 812, 1717, 2520, 2738, 4068, 4225 |
| EcoRV | GATATC | 1 cut(s) | 2205 |
| EcoT14I | CCWWGG | 7 cut(s) | 248, 2243, 2772, 2983, 3311, 3513, 3783 |
| EcoT22I | ATGCAT | 2 cut(s) | 1429, 1816 |
| EcoT38I | GRGCYC | 9 cut(s) | 315, 500, 1337, 1458, 2060, 2192, 2991, 3766, 4031 |
| ErhI | CCWWGG | 7 cut(s) | 248, 2243, 2772, 2983, 3311, 3513, 3783 |
| Esp3I | CGTCTC | 1 cut(s) | 298 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1513, 1545, 2869, 2901 |
| FaqI | GGGAC | 7 cut(s) | 1310, 1538, 2598, 2753, 3439, 4030, 4330 |
| FauI | CCCGC | 2 cut(s) | 795, 3141 |
| FauNDI | CATATG | 2 cut(s) | 899, 2782 |
| FbaI | TGATCA | 3 cut(s) | 2326, 2490, 3193 |
| FblI | GTMKAC | 3 cut(s) | 1145, 1893, 2911 |
| Fnu4HI | GCNGC | 7 cut(s) | 12, 887, 1723, 1791, 1923, 2178, 3035 |
| FokI | GGATG | 7 cut(s) | 876, 1373, 2641, 2907, 3461, 4085, 4163 |
| FriOI | GRGCYC | 9 cut(s) | 315, 500, 1337, 1458, 2060, 2192, 2991, 3766, 4031 |
| Fsp4HI | GCNGC | 7 cut(s) | 12, 887, 1723, 1791, 1923, 2178, 3035 |
| FspBI | CTAG | 5 cut(s) | 249, 366, 440, 474, 1080 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GluI | GCNGC | 7 cut(s) | 12, 887, 1723, 1791, 1923, 2178, 3035 |
| GsaI | CCCAGC | 2 cut(s) | 822, 3459 |
| GsuI | CTGGAG | 3 cut(s) | 693, 1176, 1853 |
| HapII | CCGG | 7 cut(s) | 189, 2125, 2251, 2527, 2871, 3293, 4025 |
| HgaI | GACGC | 2 cut(s) | 280, 1934 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin1I | GRCGYC | 2 cut(s) | 291, 1945 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HincII | GTYRAC | 3 cut(s) | 1894, 2974, 4246 |
| HindII | GTYRAC | 3 cut(s) | 1894, 2974, 4246 |
| HindIII | AAGCTT | 5 cut(s) | 621, 1227, 2014, 3926, 4142 |
| HpaI | GTTAAC | 1 cut(s) | 2974 |
| HpaII | CCGG | 7 cut(s) | 189, 2125, 2251, 2527, 2871, 3293, 4025 |
| HphI | GGTGA | 6 cut(s) | 175, 1078, 1394, 2345, 3728, 4151 |
| Hpy99I | CGWCG | 5 cut(s) | 40, 182, 215, 1246, 1950 |
| HpyCH4IV | ACGT | 7 cut(s) | 210, 271, 1241, 1759, 1969, 2908, 3720 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 145, 243, 1019, 1049, 1168, 1394, 1493, 2569, 3557 |
| HpySE526I | ACGT | 7 cut(s) | 210, 271, 1241, 1759, 1969, 2908, 3720 |
| Hsp92I | GRCGYC | 2 cut(s) | 291, 1945 |
| HspAI | GCGC | 1 cut(s) | 148 |
| Kpn2I | TCCGGA | 1 cut(s) | 2250 |
| KpnI | GGTACC | 2 cut(s) | 3960, 4068 |
| Ksp22I | TGATCA | 3 cut(s) | 2326, 2490, 3193 |
| KspAI | GTTAAC | 1 cut(s) | 2974 |
| Kzo9I | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| Lsp1109I | GCAGC | 5 cut(s) | 898, 1709, 1777, 1909, 2164 |
| MaeI | CTAG | 5 cut(s) | 249, 366, 440, 474, 1080 |
| MaeII | ACGT | 7 cut(s) | 210, 271, 1241, 1759, 1969, 2908, 3720 |
| MalI | GATC | 9 cut(s) | 564, 1078, 1866, 2088, 2142, 2328, 2478, 2492, 3195 |
| MbiI | CCGCTC | 1 cut(s) | 802 |
| MboI | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| MfeI | CAATTG | 4 cut(s) | 957, 1917, 2398, 3420 |
| MflI | RGATCY | 3 cut(s) | 1076, 2140, 2476 |
| MlsI | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| MluNI | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| MlyI | GAGTC | 7 cut(s) | 137, 539, 707, 1520, 1769, 1996, 4315 |
| MmeI | TCCRAC | 6 cut(s) | 108, 628, 1240, 2116, 3728, 3893 |
| Mox20I | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| Mph1103I | ATGCAT | 2 cut(s) | 1429, 1816 |
| MroI | TCCGGA | 1 cut(s) | 2250 |
| MroXI | GAANNNNTTC | 2 cut(s) | 397, 1556 |
| MscI | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| MslI | CAYNNNNRTG | 4 cut(s) | 339, 848, 1752, 3335 |
| Msp20I | TGGCCA | 4 cut(s) | 2520, 3064, 3207, 3782 |
| MspA1I | CMGCKG | 4 cut(s) | 908, 1862, 2177, 3485 |
| MspI | CCGG | 7 cut(s) | 189, 2125, 2251, 2527, 2871, 3293, 4025 |
| MspR9I | CCNGG | 9 cut(s) | 190, 814, 1719, 2522, 2740, 2872, 4026, 4070, 4227 |
| MunI | CAATTG | 4 cut(s) | 957, 1917, 2398, 3420 |
| Mva1269I | GAATGC | 4 cut(s) | 585, 1759, 2169, 2916 |
| MvaI | CCWGG | 6 cut(s) | 814, 1719, 2522, 2740, 4070, 4227 |
| MvnI | CGCG | 2 cut(s) | 11, 148 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 145, 243, 1019, 1049, 1168, 1394, 1493, 2569, 3557 |
| NciI | CCSGG | 3 cut(s) | 190, 2872, 4026 |
| NcoI | CCATGG | 2 cut(s) | 2243, 2983 |
| NdeI | CATATG | 2 cut(s) | 899, 2782 |
| NdeII | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| NmeAIII | GCCGAG | 1 cut(s) | 176 |
| NmuCI | GTSAC | 6 cut(s) | 181, 1879, 2953, 3103, 3716, 3964 |
| NsiI | ATGCAT | 2 cut(s) | 1429, 1816 |
| NspI | RCATGY | 1 cut(s) | 743 |
| PaeR7I | CTCGAG | 1 cut(s) | 125 |
| PagI | TCATGA | 2 cut(s) | 796, 2224 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1250, 1899, 1975 |
| PctI | GAATGC | 4 cut(s) | 585, 1759, 2169, 2916 |
| PdmI | GAANNNNTTC | 2 cut(s) | 397, 1556 |
| PflFI | GACNNNGTC | 2 cut(s) | 176, 290 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 962, 3514 |
| PkrI | GCNGC | 7 cut(s) | 13, 888, 1724, 1792, 1924, 2179, 3036 |
| PleI | GAGTC | 7 cut(s) | 136, 538, 706, 1520, 1769, 1996, 4315 |
| PmaCI | CACGTG | 1 cut(s) | 1760 |
| PmlI | CACGTG | 1 cut(s) | 1760 |
| PpsI | GAGTC | 7 cut(s) | 136, 538, 706, 1520, 1769, 1996, 4315 |
| Ppu21I | YACGTR | 1 cut(s) | 1760 |
| PpuMI | RGGWCCY | 2 cut(s) | 121, 2234 |
| PshBI | ATTAAT | 3 cut(s) | 1536, 1578, 2456 |
| PsiI | TTATAA | 1 cut(s) | 1826 |
| Psp124BI | GAGCTC | 5 cut(s) | 315, 1458, 2060, 2192, 3766 |
| Psp5II | RGGWCCY | 2 cut(s) | 121, 2234 |
| Psp6I | CCWGG | 6 cut(s) | 812, 1717, 2520, 2738, 4068, 4225 |
| PspCI | CACGTG | 1 cut(s) | 1760 |
| PspEI | GGTNACC | 1 cut(s) | 3794 |
| PspFI | CCCAGC | 2 cut(s) | 818, 3455 |
| PspGI | CCWGG | 6 cut(s) | 812, 1717, 2520, 2738, 4068, 4225 |
| PspOMI | GGGCCC | 1 cut(s) | 496 |
| PspPPI | RGGWCCY | 2 cut(s) | 121, 2234 |
| PspXI | VCTCGAGB | 1 cut(s) | 125 |
| PstI | CTGCAG | 1 cut(s) | 1927 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2672, 2699 |
| PsuI | RGATCY | 3 cut(s) | 1076, 2140, 2476 |
| PsyI | GACNNNGTC | 2 cut(s) | 176, 290 |
| PvuII | CAGCTG | 4 cut(s) | 908, 1862, 2177, 3485 |
| RseI | CAYNNNNRTG | 4 cut(s) | 339, 848, 1752, 3335 |
| SacI | GAGCTC | 5 cut(s) | 315, 1458, 2060, 2192, 3766 |
| SalI | GTCGAC | 1 cut(s) | 1892 |
| SatI | GCNGC | 7 cut(s) | 12, 887, 1723, 1791, 1923, 2178, 3035 |
| Sau3AI | GATC | 9 cut(s) | 562, 1076, 1864, 2086, 2140, 2326, 2476, 2490, 3193 |
| ScaI | AGTACT | 2 cut(s) | 1236, 2263 |
| SchI | GAGTC | 7 cut(s) | 137, 539, 707, 1520, 1769, 1996, 4315 |
| ScrFI | CCNGG | 9 cut(s) | 190, 814, 1719, 2522, 2740, 2872, 4026, 4070, 4227 |
| SfcI | CTRYAG | 1 cut(s) | 1923 |
| Sfr274I | CTCGAG | 1 cut(s) | 125 |
| SinI | GGWCC | 5 cut(s) | 121, 1544, 2234, 2663, 4017 |
| SlaI | CTCGAG | 1 cut(s) | 125 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 339, 848, 1752, 3335 |
| SmlI | CTYRAG | 5 cut(s) | 125, 308, 567, 3229, 3934 |
| SmoI | CTYRAG | 5 cut(s) | 125, 308, 567, 3229, 3934 |
| SsiI | CCGC | 9 cut(s) | 11, 186, 356, 802, 2364, 3035, 3134, 3979, 4192 |
| SspI | AATATT | 2 cut(s) | 2379, 3691 |
| SspMI | CTAG | 5 cut(s) | 249, 366, 440, 474, 1080 |
| SstI | GAGCTC | 5 cut(s) | 315, 1458, 2060, 2192, 3766 |
| StyD4I | CCNGG | 9 cut(s) | 188, 812, 1717, 2520, 2738, 2870, 4024, 4068, 4225 |
| StyI | CCWWGG | 7 cut(s) | 248, 2243, 2772, 2983, 3311, 3513, 3783 |
| TaiI | ACGT | 7 cut(s) | 213, 274, 1244, 1762, 1972, 2911, 3723 |
| TaqI | TCGA | 8 cut(s) | 97, 126, 774, 1893, 1948, 1978, 2201, 3367 |
| TaqII | GACCGA | 1 cut(s) | 4023 |
| TatI | WGTACW | 3 cut(s) | 1234, 2261, 3067 |
| TauI | GCSGC | 2 cut(s) | 14, 3037 |
| TscAI | CASTG | 9 cut(s) | 35, 491, 1108, 1344, 2070, 2161, 2223, 2962, 3171 |
| TseFI | GTSAC | 6 cut(s) | 181, 1879, 2953, 3103, 3716, 3964 |
| TseI | GCWGC | 5 cut(s) | 886, 1722, 1790, 1922, 2177 |
| Tsp45I | GTSAC | 6 cut(s) | 181, 1879, 2953, 3103, 3716, 3964 |
| TspGWI | ACGGA | 4 cut(s) | 131, 3069, 3830, 3846 |
| TspRI | CASTG | 9 cut(s) | 35, 491, 1108, 1344, 2070, 2161, 2223, 2962, 3171 |
| Tth111I | GACNNNGTC | 2 cut(s) | 176, 290 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 962, 3514 |
| VneI | GTGCAC | 1 cut(s) | 2152 |
| VpaK11BI | GGWCC | 5 cut(s) | 121, 1544, 2234, 2663, 4017 |
| VspI | ATTAAT | 3 cut(s) | 1536, 1578, 2456 |
| XbaI | TCTAGA | 1 cut(s) | 439 |
| XceI | RCATGY | 1 cut(s) | 743 |
| XhoI | CTCGAG | 1 cut(s) | 125 |
| XmaJI | CCTAGG | 1 cut(s) | 248 |
| XmiI | GTMKAC | 3 cut(s) | 1145, 1893, 2911 |
| XmnI | GAANNNNTTC | 2 cut(s) | 397, 1556 |
| XspI | CTAG | 5 cut(s) | 249, 366, 440, 474, 1080 |
| ZrmI | AGTACT | 2 cut(s) | 1236, 2263 |
| Zsp2I | ATGCAT | 2 cut(s) | 1429, 1816 |