Cleavage and polyadenylation specificity factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51660 AT5G51660 AT5G51660 AT5G51660 |
| fragaria_vesca | FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 FvH4_7g28210 |
| malus_domestica | MD01G1186100.v1.1 |
| prunus_persica | Prupe.2G282700_v2.0.a1 |
| pyrus_communis | pycom01g19770 |
| rosa_chinensis | RchiOBHm_Chr1g0375181 |
| rosa_laevigata | RLG00000026681 |
| rosa_multiflora | Rmu_sc0000554.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00282960 |
| rosa_rugosa | Rorug01G0389000 Rorug01G0389000 |
| rosa_samantha | Rh1AG399600 Rh1CG377800 |
| rosa_wichuraiana | Rw1G035470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1820 |
| AarI | CACCTGC | 1 cut(s) | 564 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 179 |
| Acc36I | ACCTGC | 2 cut(s) | 564, 1942 |
| Acc65I | GGTACC | 1 cut(s) | 4034 |
| AccB1I | GGYRCC | 4 cut(s) | 236, 1655, 3530, 4034 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 962 |
| AccBSI | CCGCTC | 2 cut(s) | 802, 895 |
| AccI | GTMKAC | 2 cut(s) | 1145, 2902 |
| AccII | CGCG | 3 cut(s) | 11, 1022, 1965 |
| AccIII | TCCGGA | 2 cut(s) | 169, 257 |
| AclI | AACGTT | 1 cut(s) | 3855 |
| AclWI | GGATC | 5 cut(s) | 253, 557, 2072, 2126, 3751 |
| AcoI | YGGCCR | 7 cut(s) | 32, 137, 1392, 2034, 3053, 3196, 3762 |
| AcuI | CTGAAG | 4 cut(s) | 1215, 2517, 2697, 3966 |
| AcvI | CACGTG | 1 cut(s) | 1757 |
| AcyI | GRCGYC | 2 cut(s) | 291, 1939 |
| AdeI | CACNNNGTG | 2 cut(s) | 632, 2962 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 130, 169, 272, 962, 2235, 2517, 3077 |
| AflIII | ACRYGT | 2 cut(s) | 2787, 2905 |
| AgeI | ACCGGT | 1 cut(s) | 2039 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 127 |
| AjnI | CCWGG | 7 cut(s) | 123, 717, 1714, 2511, 3994, 4038, 4195 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3918, 3950 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4279, 4311 |
| Alw21I | GWGCWC | 5 cut(s) | 1455, 1762, 1972, 2054, 2147 |
| Alw26I | GTCTC | 5 cut(s) | 284, 298, 832, 1198, 2654 |
| Alw44I | GTGCAC | 1 cut(s) | 2143 |
| AlwI | GGATC | 5 cut(s) | 253, 557, 2072, 2126, 3751 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3143, 4001 |
| Ama87I | CYCGRG | 2 cut(s) | 58, 2228 |
| Aor13HI | TCCGGA | 2 cut(s) | 169, 257 |
| ApaI | GGGCCC | 1 cut(s) | 500 |
| ApaLI | GTGCAC | 1 cut(s) | 2143 |
| ApeKI | GCWGC | 8 cut(s) | 623, 886, 937, 1103, 1916, 2168, 3446, 4047 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 195, 227 |
| AseI | ATTAAT | 2 cut(s) | 1533, 1575 |
| AsiGI | ACCGGT | 1 cut(s) | 2039 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 397, 1553 |
| Asp718I | GGTACC | 1 cut(s) | 4034 |
| AspLEI | GCGC | 3 cut(s) | 56, 1022, 4066 |
| AsuC2I | CCSGG | 1 cut(s) | 2863 |
| AsuHPI | GGTGA | 8 cut(s) | 175, 389, 985, 1165, 1391, 1457, 2336, 3710 |
| AvaI | CYCGRG | 2 cut(s) | 58, 2228 |
| AvaII | GGWCC | 7 cut(s) | 109, 172, 1541, 2225, 2654, 3581, 3987 |
| AxyI | CCTNAGG | 1 cut(s) | 105 |
| BaeGI | GKGCMC | 5 cut(s) | 500, 1660, 2147, 2382, 2512 |
| BalI | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| BanI | GGYRCC | 4 cut(s) | 236, 1655, 3530, 4034 |
| BanII | GRGCYC | 4 cut(s) | 500, 1334, 1455, 2982 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3104, 3136 |
| BauI | CACGAG | 4 cut(s) | 78, 690, 797, 2754 |
| BbrPI | CACGTG | 1 cut(s) | 1757 |
| BbsI | GAAGAC | 1 cut(s) | 1407 |
| Bbv12I | GWGCWC | 5 cut(s) | 1455, 1762, 1972, 2054, 2147 |
| BbvI | GCAGC | 8 cut(s) | 610, 898, 924, 1090, 1903, 2155, 3433, 4059 |
| BceAI | ACGGC | 2 cut(s) | 304, 2571 |
| BciT130I | CCWGG | 7 cut(s) | 125, 719, 1716, 2513, 3996, 4040, 4197 |
| BclI | TGATCA | 3 cut(s) | 2317, 2481, 3184 |
| BcnI | CCSGG | 1 cut(s) | 2863 |
| BcoDI | GTCTC | 5 cut(s) | 284, 298, 832, 1198, 2654 |
| BfaI | CTAG | 8 cut(s) | 176, 249, 474, 1080, 2435, 2778, 3450, 3782 |
| BfmI | CTRYAG | 3 cut(s) | 1917, 4103, 4329 |
| BfuAI | ACCTGC | 2 cut(s) | 564, 1942 |
| BglII | AGATCT | 3 cut(s) | 1076, 1858, 3861 |
| BisI | GCNGC | 9 cut(s) | 12, 624, 887, 938, 1104, 1917, 2169, 3447, 4048 |
| BlpI | GCTNAGC | 1 cut(s) | 3824 |
| BlsI | GCNGC | 9 cut(s) | 13, 625, 888, 939, 1105, 1918, 2170, 3448, 4049 |
| BmcAI | AGTACT | 2 cut(s) | 1236, 2254 |
| Bme1390I | CCNGG | 8 cut(s) | 125, 719, 1716, 2513, 2863, 3996, 4040, 4197 |
| Bme18I | GGWCC | 7 cut(s) | 109, 172, 1541, 2225, 2654, 3581, 3987 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 2 cut(s) | 58, 2228 |
| BmrFI | CCNGG | 8 cut(s) | 125, 719, 1716, 2513, 2863, 3996, 4040, 4197 |
| BmrI | ACTGGG | 1 cut(s) | 1164 |
| BmuI | ACTGGG | 1 cut(s) | 1164 |
| BpiI | GAAGAC | 1 cut(s) | 1407 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1439, 1471, 2651, 2683, 2737, 2769 |
| BpmI | CTGGAG | 3 cut(s) | 146, 693, 1847 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3824 |
| BpuEI | CTTGAG | 4 cut(s) | 461, 552, 2764, 3019 |
| BpuMI | CCSGG | 1 cut(s) | 2863 |
| BsaAI | YACGTR | 2 cut(s) | 1757, 2906 |
| BsaBI | GATNNNNATC | 2 cut(s) | 788, 1800 |
| BsaHI | GRCGYC | 2 cut(s) | 291, 1939 |
| BsaI | GGTCTC | 1 cut(s) | 284 |
| BsaWI | WCCGGW | 4 cut(s) | 169, 257, 1637, 2039 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 130, 169, 272, 962, 2235, 2517, 3077 |
| Bse118I | RCCGGY | 2 cut(s) | 38, 2039 |
| Bse1I | ACTGG | 8 cut(s) | 35, 140, 1006, 1159, 1600, 1629, 3056, 4165 |
| Bse21I | CCTNAGG | 1 cut(s) | 105 |
| Bse3DI | GCAATG | 2 cut(s) | 1424, 2832 |
| Bse8I | GATNNNNATC | 2 cut(s) | 788, 1800 |
| BseAI | TCCGGA | 2 cut(s) | 169, 257 |
| BseBI | CCWGG | 7 cut(s) | 125, 719, 1716, 2513, 3996, 4040, 4197 |
| BseGI | GGATG | 7 cut(s) | 889, 1363, 1426, 2625, 2911, 3445, 4048 |
| BseJI | GATNNNNATC | 2 cut(s) | 788, 1800 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 130, 169, 272, 962, 2235, 2517, 3077 |
| BseMI | GCAATG | 2 cut(s) | 1424, 2832 |
| BseMII | CTCAG | 9 cut(s) | 119, 1508, 1692, 1856, 2084, 3503, 3761, 3815, 3879 |
| BseNI | ACTGG | 8 cut(s) | 35, 140, 1006, 1159, 1600, 1629, 3056, 4165 |
| BseRI | GAGGAG | 2 cut(s) | 1463, 3075 |
| BseSI | GKGCMC | 5 cut(s) | 500, 1660, 2147, 2382, 2512 |
| BseXI | GCAGC | 8 cut(s) | 610, 898, 924, 1090, 1903, 2155, 3433, 4059 |
| BseYI | CCCAGC | 1 cut(s) | 818 |
| BsgI | GTGCAG | 5 cut(s) | 609, 843, 1331, 1503, 1970 |
| Bsh1236I | CGCG | 3 cut(s) | 11, 1022, 1965 |
| Bsh1285I | CGRYCG | 1 cut(s) | 39 |
| BshNI | GGYRCC | 4 cut(s) | 236, 1655, 3530, 4034 |
| BshTI | ACCGGT | 1 cut(s) | 2039 |
| BsiEI | CGRYCG | 1 cut(s) | 39 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1455, 1762, 1972, 2054, 2147 |
| BsiHKCI | CYCGRG | 2 cut(s) | 58, 2228 |
| BsiSI | CCGG | 8 cut(s) | 39, 170, 189, 258, 1638, 2040, 2862, 3477 |
| BslFI | GGGAC | 6 cut(s) | 1310, 1535, 2744, 3430, 4000, 4300 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 130, 169, 272, 962, 2235, 2517, 3077 |
| BsmAI | GTCTC | 5 cut(s) | 284, 298, 832, 1198, 2654 |
| BsmBI | CGTCTC | 1 cut(s) | 298 |
| BsmFI | GGGAC | 6 cut(s) | 1310, 1535, 2744, 3430, 4000, 4300 |
| BsmI | GAATGC | 5 cut(s) | 105, 336, 1756, 2029, 2160 |
| Bso31I | GGTCTC | 1 cut(s) | 284 |
| BsoBI | CYCGRG | 2 cut(s) | 58, 2228 |
| Bsp120I | GGGCCC | 1 cut(s) | 496 |
| Bsp13I | TCCGGA | 2 cut(s) | 169, 257 |
| Bsp1407I | TGTACA | 3 cut(s) | 760, 1198, 2204 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3824 |
| BspCNI | CTCAG | 9 cut(s) | 118, 1507, 1693, 1857, 2085, 3502, 3760, 3816, 3880 |
| BspEI | TCCGGA | 2 cut(s) | 169, 257 |
| BspFNI | CGCG | 3 cut(s) | 11, 1022, 1965 |
| BspHI | TCATGA | 1 cut(s) | 2215 |
| BspMAI | CTGCAG | 1 cut(s) | 1921 |
| BspMI | ACCTGC | 2 cut(s) | 564, 1942 |
| BspPI | GGATC | 5 cut(s) | 253, 557, 2072, 2126, 3751 |
| BspT107I | GGYRCC | 4 cut(s) | 236, 1655, 3530, 4034 |
| BspTNI | GGTCTC | 1 cut(s) | 284 |
| BsrBI | CCGCTC | 2 cut(s) | 802, 895 |
| BsrDI | GCAATG | 2 cut(s) | 1424, 2832 |
| BsrFI | RCCGGY | 2 cut(s) | 38, 2039 |
| BsrGI | TGTACA | 3 cut(s) | 760, 1198, 2204 |
| BsrI | ACTGG | 8 cut(s) | 35, 140, 1006, 1159, 1600, 1629, 3056, 4165 |
| BssAI | RCCGGY | 2 cut(s) | 38, 2039 |
| BssNI | GRCGYC | 2 cut(s) | 291, 1939 |
| BssSI | CACGAG | 4 cut(s) | 78, 690, 797, 2754 |
| BssT1I | CCWWGG | 5 cut(s) | 2234, 2763, 3302, 3694, 3765 |
| Bst2BI | CACGAG | 4 cut(s) | 78, 690, 797, 2754 |
| Bst2UI | CCWGG | 7 cut(s) | 125, 719, 1716, 2513, 3996, 4040, 4197 |
| Bst6I | CTCTTC | 4 cut(s) | 225, 388, 514, 2464 |
| BstACI | GRCGYC | 2 cut(s) | 291, 1939 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 686 |
| BstAUI | TGTACA | 3 cut(s) | 760, 1198, 2204 |
| BstBAI | YACGTR | 2 cut(s) | 1757, 2906 |
| BstC8I | GCNNGC | 5 cut(s) | 942, 2556, 3196, 4223, 4276 |
| BstEII | GGTNACC | 1 cut(s) | 3776 |
| BstF5I | GGATG | 7 cut(s) | 889, 1363, 1426, 2625, 2911, 3445, 4048 |
| BstFNI | CGCG | 3 cut(s) | 11, 1022, 1965 |
| BstHHI | GCGC | 3 cut(s) | 56, 1022, 4066 |
| BstMAI | GTCTC | 5 cut(s) | 284, 298, 832, 1198, 2654 |
| BstMCI | CGRYCG | 1 cut(s) | 39 |
| BstNI | CCWGG | 7 cut(s) | 125, 719, 1716, 2513, 3996, 4040, 4197 |
| BstNSI | RCATGY | 2 cut(s) | 743, 2791 |
| BstPI | GGTNACC | 1 cut(s) | 3776 |
| BstSCI | CCNGG | 8 cut(s) | 123, 717, 1714, 2511, 2861, 3994, 4038, 4195 |
| BstSFI | CTRYAG | 3 cut(s) | 1917, 4103, 4329 |
| BstSLI | GKGCMC | 5 cut(s) | 500, 1660, 2147, 2382, 2512 |
| BstUI | CGCG | 3 cut(s) | 11, 1022, 1965 |
| BstV1I | GCAGC | 8 cut(s) | 610, 898, 924, 1090, 1903, 2155, 3433, 4059 |
| BstV2I | GAAGAC | 1 cut(s) | 1407 |
| BstX2I | RGATCY | 6 cut(s) | 245, 1076, 1858, 2131, 3743, 3861 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4139 |
| BstYI | RGATCY | 6 cut(s) | 245, 1076, 1858, 2131, 3743, 3861 |
| Bsu36I | CCTNAGG | 1 cut(s) | 105 |
| BtsCI | GGATG | 7 cut(s) | 889, 1363, 1426, 2625, 2911, 3445, 4048 |
| BtsI | GCAGTG | 1 cut(s) | 1782 |
| BtsIMutI | CAGTG | 8 cut(s) | 28, 484, 1782, 2061, 2145, 2946, 3155, 3612 |
| BveI | ACCTGC | 2 cut(s) | 564, 1942 |
| Cac8I | GCNNGC | 5 cut(s) | 942, 2556, 3196, 4223, 4276 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3143, 4001 |
| CciI | TCATGA | 1 cut(s) | 2215 |
| CfoI | GCGC | 3 cut(s) | 56, 1022, 4066 |
| Cfr10I | RCCGGY | 2 cut(s) | 38, 2039 |
| CseI | GACGC | 3 cut(s) | 280, 1928, 2437 |
| CsiI | ACCWGGT | 1 cut(s) | 1714 |
| CspAI | ACCGGT | 1 cut(s) | 2039 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 256, 291, 2260, 2295 |
| DraI | TTTAAA | 2 cut(s) | 1032, 3597 |
| DraIII | CACNNNGTG | 2 cut(s) | 632, 2962 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 179 |
| DriI | GACNNNNNGTC | 1 cut(s) | 127 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 179 |
| EaeI | YGGCCR | 7 cut(s) | 32, 137, 1392, 2034, 3053, 3196, 3762 |
| Eam1104I | CTCTTC | 4 cut(s) | 225, 388, 514, 2464 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 127 |
| EarI | CTCTTC | 4 cut(s) | 225, 388, 514, 2464 |
| EciI | GGCGGA | 2 cut(s) | 384, 4151 |
| Ecl136II | GAGCTC | 1 cut(s) | 1453 |
| Eco130I | CCWWGG | 5 cut(s) | 2234, 2763, 3302, 3694, 3765 |
| Eco24I | GRGCYC | 4 cut(s) | 500, 1334, 1455, 2982 |
| Eco31I | GGTCTC | 1 cut(s) | 284 |
| Eco32I | GATATC | 1 cut(s) | 1384 |
| Eco47I | GGWCC | 7 cut(s) | 109, 172, 1541, 2225, 2654, 3581, 3987 |
| Eco53kI | GAGCTC | 1 cut(s) | 1453 |
| Eco57I | CTGAAG | 4 cut(s) | 1215, 2517, 2697, 3966 |
| Eco72I | CACGTG | 1 cut(s) | 1757 |
| Eco81I | CCTNAGG | 1 cut(s) | 105 |
| Eco88I | CYCGRG | 2 cut(s) | 58, 2228 |
| Eco91I | GGTNACC | 1 cut(s) | 3776 |
| EcoICRI | GAGCTC | 1 cut(s) | 1453 |
| EcoO109I | RGGNCCY | 3 cut(s) | 496, 2225, 3581 |
| EcoO65I | GGTNACC | 1 cut(s) | 3776 |
| EcoRI | GAATTC | 2 cut(s) | 1974, 3521 |
| EcoRII | CCWGG | 7 cut(s) | 123, 717, 1714, 2511, 3994, 4038, 4195 |
| EcoRV | GATATC | 1 cut(s) | 1384 |
| EcoT14I | CCWWGG | 5 cut(s) | 2234, 2763, 3302, 3694, 3765 |
| EcoT22I | ATGCAT | 2 cut(s) | 1426, 1810 |
| EcoT38I | GRGCYC | 4 cut(s) | 500, 1334, 1455, 2982 |
| ErhI | CCWWGG | 5 cut(s) | 2234, 2763, 3302, 3694, 3765 |
| Esp3I | CGTCTC | 1 cut(s) | 298 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1510, 1542, 2860, 2892 |
| FaqI | GGGAC | 6 cut(s) | 1310, 1535, 2744, 3430, 4000, 4300 |
| FauI | CCCGC | 2 cut(s) | 155, 795 |
| FauNDI | CATATG | 2 cut(s) | 899, 2773 |
| FbaI | TGATCA | 3 cut(s) | 2317, 2481, 3184 |
| FblI | GTMKAC | 2 cut(s) | 1145, 2902 |
| Fnu4HI | GCNGC | 9 cut(s) | 12, 624, 887, 938, 1104, 1917, 2169, 3447, 4048 |
| FokI | GGATG | 7 cut(s) | 876, 1370, 1433, 2632, 2898, 3452, 4055 |
| FriOI | GRGCYC | 4 cut(s) | 500, 1334, 1455, 2982 |
| Fsp4HI | GCNGC | 9 cut(s) | 12, 624, 887, 938, 1104, 1917, 2169, 3447, 4048 |
| FspBI | CTAG | 8 cut(s) | 176, 249, 474, 1080, 2435, 2778, 3450, 3782 |
| GlaI | GCGC | 3 cut(s) | 55, 1021, 4065 |
| GluI | GCNGC | 9 cut(s) | 12, 624, 887, 938, 1104, 1917, 2169, 3447, 4048 |
| GsaI | CCCAGC | 1 cut(s) | 822 |
| GsuI | CTGGAG | 3 cut(s) | 146, 693, 1847 |
| HapII | CCGG | 8 cut(s) | 39, 170, 189, 258, 1638, 2040, 2862, 3477 |
| HgaI | GACGC | 3 cut(s) | 280, 1928, 2437 |
| HhaI | GCGC | 3 cut(s) | 56, 1022, 4066 |
| Hin1I | GRCGYC | 2 cut(s) | 291, 1939 |
| Hin6I | GCGC | 3 cut(s) | 54, 1020, 4064 |
| HinP1I | GCGC | 3 cut(s) | 54, 1020, 4064 |
| HincII | GTYRAC | 6 cut(s) | 697, 715, 1888, 2281, 2793, 4216 |
| HindII | GTYRAC | 6 cut(s) | 697, 715, 1888, 2281, 2793, 4216 |
| HindIII | AAGCTT | 3 cut(s) | 1227, 2008, 3908 |
| HpaI | GTTAAC | 1 cut(s) | 715 |
| HpaII | CCGG | 8 cut(s) | 39, 170, 189, 258, 1638, 2040, 2862, 3477 |
| HphI | GGTGA | 8 cut(s) | 175, 389, 985, 1165, 1391, 1457, 2336, 3710 |
| Hpy99I | CGWCG | 3 cut(s) | 215, 1246, 1944 |
| HpyCH4IV | ACGT | 8 cut(s) | 195, 210, 1241, 1756, 2899, 2905, 3657, 3855 |
| HpySE526I | ACGT | 8 cut(s) | 195, 210, 1241, 1756, 2899, 2905, 3657, 3855 |
| Hsp92I | GRCGYC | 2 cut(s) | 291, 1939 |
| HspAI | GCGC | 3 cut(s) | 54, 1020, 4064 |
| Kpn2I | TCCGGA | 2 cut(s) | 169, 257 |
| KpnI | GGTACC | 1 cut(s) | 4038 |
| Ksp22I | TGATCA | 3 cut(s) | 2317, 2481, 3184 |
| KspAI | GTTAAC | 1 cut(s) | 715 |
| LmnI | GCTCC | 8 cut(s) | 805, 1093, 1159, 1337, 1450, 1477, 3280, 3736 |
| Lsp1109I | GCAGC | 8 cut(s) | 610, 898, 924, 1090, 1903, 2155, 3433, 4059 |
| MabI | ACCWGGT | 1 cut(s) | 1714 |
| MaeI | CTAG | 8 cut(s) | 176, 249, 474, 1080, 2435, 2778, 3450, 3782 |
| MaeII | ACGT | 8 cut(s) | 195, 210, 1241, 1756, 2899, 2905, 3657, 3855 |
| MbiI | CCGCTC | 2 cut(s) | 802, 895 |
| MfeI | CAATTG | 3 cut(s) | 957, 1911, 3411 |
| MflI | RGATCY | 6 cut(s) | 245, 1076, 1858, 2131, 3743, 3861 |
| MlsI | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| MluNI | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| MlyI | GAGTC | 8 cut(s) | 137, 459, 539, 692, 1517, 2112, 2450, 4285 |
| MmeI | TCCRAC | 4 cut(s) | 111, 3710, 3875, 3916 |
| Mox20I | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| Mph1103I | ATGCAT | 2 cut(s) | 1426, 1810 |
| MroI | TCCGGA | 2 cut(s) | 169, 257 |
| MroXI | GAANNNNTTC | 2 cut(s) | 397, 1553 |
| MscI | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| MslI | CAYNNNNRTG | 3 cut(s) | 339, 1749, 3326 |
| Msp20I | TGGCCA | 4 cut(s) | 139, 3055, 3198, 3764 |
| MspA1I | CMGCKG | 2 cut(s) | 908, 2168 |
| MspI | CCGG | 8 cut(s) | 39, 170, 189, 258, 1638, 2040, 2862, 3477 |
| MspR9I | CCNGG | 8 cut(s) | 125, 719, 1716, 2513, 2863, 3996, 4040, 4197 |
| MunI | CAATTG | 3 cut(s) | 957, 1911, 3411 |
| Mva1269I | GAATGC | 5 cut(s) | 105, 336, 1756, 2029, 2160 |
| MvaI | CCWGG | 7 cut(s) | 125, 719, 1716, 2513, 3996, 4040, 4197 |
| MvnI | CGCG | 3 cut(s) | 11, 1022, 1965 |
| NciI | CCSGG | 1 cut(s) | 2863 |
| NdeI | CATATG | 2 cut(s) | 899, 2773 |
| NmeAIII | GCCGAG | 1 cut(s) | 176 |
| NmuCI | GTSAC | 5 cut(s) | 181, 1873, 3094, 3698, 4098 |
| NsiI | ATGCAT | 2 cut(s) | 1426, 1810 |
| NspI | RCATGY | 2 cut(s) | 743, 2791 |
| PagI | TCATGA | 1 cut(s) | 2215 |
| PaqCI | CACCTGC | 1 cut(s) | 564 |
| PasI | CCCWGGG | 1 cut(s) | 2512 |
| PciI | ACATGT | 1 cut(s) | 2787 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 207, 1969 |
| PctI | GAATGC | 5 cut(s) | 105, 336, 1756, 2029, 2160 |
| PdmI | GAANNNNTTC | 2 cut(s) | 397, 1553 |
| PflFI | GACNNNGTC | 2 cut(s) | 176, 290 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 962 |
| PinAI | ACCGGT | 1 cut(s) | 2039 |
| PkrI | GCNGC | 9 cut(s) | 13, 625, 888, 939, 1105, 1918, 2170, 3448, 4049 |
| PleI | GAGTC | 8 cut(s) | 136, 459, 538, 692, 1517, 2112, 2450, 4285 |
| PmaCI | CACGTG | 1 cut(s) | 1757 |
| PmlI | CACGTG | 1 cut(s) | 1757 |
| PpsI | GAGTC | 8 cut(s) | 136, 459, 538, 692, 1517, 2112, 2450, 4285 |
| Ppu21I | YACGTR | 2 cut(s) | 1757, 2906 |
| PpuMI | RGGWCCY | 2 cut(s) | 2225, 3581 |
| PscI | ACATGT | 1 cut(s) | 2787 |
| PshBI | ATTAAT | 2 cut(s) | 1533, 1575 |
| PsiI | TTATAA | 1 cut(s) | 1820 |
| Psp124BI | GAGCTC | 1 cut(s) | 1455 |
| Psp1406I | AACGTT | 1 cut(s) | 3855 |
| Psp5II | RGGWCCY | 2 cut(s) | 2225, 3581 |
| Psp6I | CCWGG | 7 cut(s) | 123, 717, 1714, 2511, 3994, 4038, 4195 |
| PspCI | CACGTG | 1 cut(s) | 1757 |
| PspEI | GGTNACC | 1 cut(s) | 3776 |
| PspFI | CCCAGC | 1 cut(s) | 818 |
| PspGI | CCWGG | 7 cut(s) | 123, 717, 1714, 2511, 3994, 4038, 4195 |
| PspOMI | GGGCCC | 1 cut(s) | 496 |
| PspPPI | RGGWCCY | 2 cut(s) | 2225, 3581 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3931, 3963 |
| PstI | CTGCAG | 1 cut(s) | 1921 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3143, 4001 |
| PsuI | RGATCY | 6 cut(s) | 245, 1076, 1858, 2131, 3743, 3861 |
| PsyI | GACNNNGTC | 2 cut(s) | 176, 290 |
| PvuII | CAGCTG | 2 cut(s) | 908, 2168 |
| RseI | CAYNNNNRTG | 3 cut(s) | 339, 1749, 3326 |
| SacI | GAGCTC | 1 cut(s) | 1455 |
| SatI | GCNGC | 9 cut(s) | 12, 624, 887, 938, 1104, 1917, 2169, 3447, 4048 |
| ScaI | AGTACT | 2 cut(s) | 1236, 2254 |
| SchI | GAGTC | 8 cut(s) | 137, 459, 539, 692, 1517, 2112, 2450, 4285 |
| ScrFI | CCNGG | 8 cut(s) | 125, 719, 1716, 2513, 2863, 3996, 4040, 4197 |
| SexAI | ACCWGGT | 1 cut(s) | 1714 |
| SfcI | CTRYAG | 3 cut(s) | 1917, 4103, 4329 |
| SinI | GGWCC | 7 cut(s) | 109, 172, 1541, 2225, 2654, 3581, 3987 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 339, 1749, 3326 |
| SmlI | CTYRAG | 4 cut(s) | 440, 567, 2743, 3034 |
| SmoI | CTYRAG | 4 cut(s) | 440, 567, 2743, 3034 |
| SspI | AATATT | 2 cut(s) | 2370, 3673 |
| SspMI | CTAG | 8 cut(s) | 176, 249, 474, 1080, 2435, 2778, 3450, 3782 |
| SstI | GAGCTC | 1 cut(s) | 1455 |
| StyD4I | CCNGG | 8 cut(s) | 123, 717, 1714, 2511, 2861, 3994, 4038, 4195 |
| StyI | CCWWGG | 5 cut(s) | 2234, 2763, 3302, 3694, 3765 |
| TaiI | ACGT | 8 cut(s) | 198, 213, 1244, 1759, 2902, 2908, 3660, 3858 |
| TaqII | GACCGA | 2 cut(s) | 131, 4161 |
| TatI | WGTACW | 6 cut(s) | 760, 1198, 1234, 2204, 2252, 3058 |
| TauI | GCSGC | 1 cut(s) | 14 |
| TscAI | CASTG | 8 cut(s) | 35, 491, 1789, 2061, 2152, 2953, 3162, 3619 |
| TseFI | GTSAC | 5 cut(s) | 181, 1873, 3094, 3698, 4098 |
| TseI | GCWGC | 8 cut(s) | 623, 886, 937, 1103, 1916, 2168, 3446, 4047 |
| Tsp45I | GTSAC | 5 cut(s) | 181, 1873, 3094, 3698, 4098 |
| TspGWI | ACGGA | 4 cut(s) | 458, 1654, 2070, 3812 |
| TspRI | CASTG | 8 cut(s) | 35, 491, 1789, 2061, 2152, 2953, 3162, 3619 |
| Tth111I | GACNNNGTC | 2 cut(s) | 176, 290 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 962 |
| VneI | GTGCAC | 1 cut(s) | 2143 |
| VpaK11BI | GGWCC | 7 cut(s) | 109, 172, 1541, 2225, 2654, 3581, 3987 |
| VspI | ATTAAT | 2 cut(s) | 1533, 1575 |
| XceI | RCATGY | 2 cut(s) | 743, 2791 |
| XmiI | GTMKAC | 2 cut(s) | 1145, 2902 |
| XmnI | GAANNNNTTC | 2 cut(s) | 397, 1553 |
| XspI | CTAG | 8 cut(s) | 176, 249, 474, 1080, 2435, 2778, 3450, 3782 |
| ZrmI | AGTACT | 2 cut(s) | 1236, 2254 |
| Zsp2I | ATGCAT | 2 cut(s) | 1426, 1810 |