Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004289

Physical Location & Seq

Genomic Coordinates Reverse (-)

21433859 .. 21439133

Gene Structure 5275 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G52882.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGAGCAGAAGAGCGTGTTGTTGTCAGCTTTAGGTGTTGGTGTTGGGTTAGGGATTGGGTTAGCATCAGGTCAAAGTTTGGGAAGATGGGCAAACGGGTCAGGTTCTGTTGAAGATGGACTCACCGGAGAACAGATTGAGCAAGAGTTGATTAGACAAATTGTTGATGGTAGAGAAAGTACTGTCACTTTTGAAGAGTTTCCGTATTTCTTAAGCAAGAGAACTCGAGAATTGTTGACAAGTGTTGCATATGTTCATTTAAAAGAGTATGATATATCGAAGCACACTCGGAATCTTGCACCTGCAAGTAAAGCCATTCTACTTTCTGGTCCTGCGGAATTTTATCAGCAAATGCTTGCAAAAGCTTTGTCTCATTACTTTGAATCAAAGCTATTGTTGTTAGATATAACTGACTTCTCTATTAAGATACAGAGTAAATATGGATGCACCAAGAGAGAACCTTTTCACAAGAGGTCTATTTCTGAGTTAACATTAGATAAAGTGTCGAGTTTGATGGGTTCCTTCTCTATGCTCTCTCAACGCGAAGTTGAACCAAGAGGGACATTGCGTCGACACACCAGTGGAAATGATCTTAAATCAAGGAGTACTGAGAGCTCTAATCGTCTTCCAAGACACAAGAGAAATGCTTCTGCTGCTTCTGATATCAGTAGCATATCTTCCCGCTCTTCGAGTTCTGTTTCAGCTTCCAGAAAACGCACTACAAATCTATGTTTCGACGAGAAACTTTTCCTGCAATCACTTTACAAGGTCTTGAGTTCTGTATCGGAAACAACTCCGCTAATCATATACTTGAGAGATGTTGAGAAGCTTCTTGAGTCAGAAAGATTCTACAAGTTGTTCCAAAGGCTCTTGAACAAGCTCTCTGGTCCTGTCTTAATTCTTGGCTCAAGAGTATTAGAACCTGAAGATGATTGCCAAGAAGTAGACGAAAGTATTTCCGCTCTATTTCCTTACAACATCGAGATCAGACCACCAGAAGATGAATCTCAGCTCGTGAGCTGGAAATCTCGGTTAGAAGACGACATGAAAATGATTCAGTTTCAAGACAACAAGAACCACATTGCAGAGGTTCTTGCTGCTAATGATATCCAATGCGATGACTTGTCTTCGATATGCCACGCAGATACAATGTGTTTGAGTAACCATATTGAGGAAATTGTGGTTTCTGCAATCACTTATCATTTGATACACACCAAAGAACCAGAATACAGAAACGGAAAGCTTGTAATATCTTCCAAAAGTTTGTCTCATGGACTAAGTATATTCCAAGAAGGTGGAAACAGATCATTTGAAGACTCGTTGAAGCTAGATACAAACACTGACTCTAAGCGAAAAGGAGGAGAAGTATGTTCAAAGAGTGAGTCAAAATCTGGTCCTGAAAACAAAAACGAGTCAGAAATATCACTTCCTTCAAACAAGAATGACAATCCATTACCTCCAAAAGCACCTGAGGTTGTTCCTGATAATGAGTTTGAGAAGCGTATAAGACCAGAAGTTATACCAGCAAATGAGATTGGTGTGACATTTGCAGATATTGGTTCTCTAGACGAAACAAAAGATTCGCTTCAAGAACTTGTAATGCTTCCACTTAGAAGACCGGATCTTTTTCAAGGCGGTCTTCTCAAGCCATGTAGAGGAATCCTATTATTCGGTCCACCTGGTACTGGCAAAACAATGCTTGCAAAAGCAATTGCAAATGAAGCTGGAGCTAGTTTCATCAATGTCTCCATGTCTACAATCACTTCAAAATGGTTTGGAGAAGACGAAAAGAATGTGAGAGCTCTGTTTACTTTAGCAGCTAAAGTATCTCCAACGATTATATTTGTGGATGAAGTTGATAGTATGTTGGGACAAAGGACAAGAGTTGGAGAGCATGAAGCTATGAGGAAGATTAAGAATGAGTTTATGACACATTGGGATGGGCTAATGACGAAACCCGGTGAAAGGATTCTCGTTCTTGCAGCGACAAACAGACCGTTTGATCTTGATGAAGCTATCATTAGGAGGTTTGAGAGAAGAATAATGGTGGGACTTCCTTCGATTGAGAGCAGAGAGAAGATCTTGAGAACTTTGTTGTCGAAAGAGAAAACAGAGAATCTTGATTTCCATGAGCTTGGGCAGATAACAGAAGGCTACAGTGGAAGTGATCTCAAGAACTTATGCATCACAGCTGCTTATAGACCAGTTAGAGAGCTGATTCAGCAGGAAAGATTGAAAGATCAGGAGAGGAAGAAGAGAGAAGAAGCAGGAAAAGGCACAGAAGAATCAAAAGAAGAAGAAGCAGAAGCTTCTGAGGAAAGAGTTATTACATTGAGACCTTTGAACATGGAAGACATGAGAAAAGCTAAAACCCAGGTAGCTGCGAGTTTTGCATCAGAAGGAGCAGGAATGAATGAGCTAAAGCAATGGAATGATTTGTATGGAGAAGGAGGCTCAAGGAAAAAGGAACAGCTCACTTACTTCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

829

Amino Acids

93.01

Weight (kDa)

5.93

Isoelectric Point (pI)

52.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	370 - 430	2.5e-33	Domain of unknown function (DUF7751)
AAA	PF00004	554 - 684	1.2e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	707 - 747	1.4e-11	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28000 AT4G28000 AT4G28000 AT5G52882
fragaria_vesca	FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620
malus_domestica	MD01G1211300.v1.1 MD07G1282000.v1.1
prunus_persica	Prupe.2G303900_v2.0.a1 Prupe.2G303900_v2.0.a1
pyrus_communis	pycom01g22180 pycom07g25590
rosa_chinensis	RchiOBHm_Chr1g0379521
rosa_laevigata	RLG00000026395
rosa_multiflora	Rmu_sc0006761.1_g000024
rosa_roxburghii	Rroxscaffold_4G00280110
rosa_rugosa	Rorug01G0412600 Rorug01G0412700 Rorug01G0412800.1 Rorug01G0412900
rosa_samantha	Rh1AG435400 Rh1BG392800 Rh1CG405400 Rh1DG423600
rosa_wichuraiana	Rw1G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	310
Acc36I	ACCTGC	1 cut(s)	310
AccBSI	CCGCTC	2 cut(s)	684, 962
AccI	GTMKAC	3 cut(s)	571, 945, 1754
AccII	CGCG	1 cut(s)	543
AciI	CCGC	5 cut(s)	335, 682, 797, 960, 1635
AclWI	GGATC	1 cut(s)	1629
AcsI	RAATTY	1 cut(s)	338
AcuI	CTGAAG	1 cut(s)	945
AfaI	GTAC	3 cut(s)	181, 607, 1684
AfiI	CCNNNNNNNGG	4 cut(s)	1171, 1655, 1685, 1965
AflII	CTTAAG	1 cut(s)	211
AhdI	GACNNNNNGTC	1 cut(s)	567
AjnI	CCWGG	2 cut(s)	1678, 2373
AleI	CACNNNNGTG	1 cut(s)	579
Alw21I	GWGCWC	2 cut(s)	617, 1804
Alw26I	GTCTC	4 cut(s)	375, 1272, 1750, 2329
AlwI	GGATC	1 cut(s)	1629
AlwNI	CAGNNNCTG	1 cut(s)	107
Ama87I	CYCGRG	1 cut(s)	225
ApeKI	GCWGC	6 cut(s)	653, 1097, 1817, 1982, 2192, 2381
ApoI	RAATTY	1 cut(s)	338
ArsI	GACNNNNNNTTYG	4 cut(s)	353, 385, 1367, 1399
Asp700I	GAANNNNTTC	5 cut(s)	198, 462, 646, 746, 1968
AspS9I	GGNCC	4 cut(s)	329, 887, 1394, 1673
AsuC2I	CCSGG	1 cut(s)	1959
AsuHPI	GGTGA	2 cut(s)	115, 1973
AvaI	CYCGRG	1 cut(s)	225
AvaII	GGWCC	4 cut(s)	329, 887, 1394, 1673
AxyI	CCTNAGG	1 cut(s)	1470
BanII	GRGCYC	2 cut(s)	617, 1804
BarI	GAAGNNNNNNTAC	2 cut(s)	661, 693
BauI	CACGAG	1 cut(s)	1013
BbsI	GAAGAC	8 cut(s)	617, 1044, 1119, 1320, 1621, 1631, 1788, 2358
Bbv12I	GWGCWC	2 cut(s)	617, 1804
BbvI	GCAGC	6 cut(s)	640, 1084, 1829, 1994, 2179, 2368
BccI	CCATC	5 cut(s)	81, 110, 161, 508, 1934
BciT130I	CCWGG	2 cut(s)	1680, 2375
BcnI	CCSGG	1 cut(s)	1959
BcoDI	GTCTC	4 cut(s)	375, 1272, 1750, 2329
BfaI	CTAG	3 cut(s)	1328, 1565, 1731
BfmI	CTRYAG	1 cut(s)	2155
BfrI	CTTAAG	1 cut(s)	211
BfuAI	ACCTGC	1 cut(s)	310
BglII	AGATCT	1 cut(s)	2079
BisI	GCNGC	6 cut(s)	654, 1098, 1818, 1983, 2193, 2382
BlsI	GCNGC	6 cut(s)	655, 1099, 1819, 1984, 2194, 2383
BmcAI	AGTACT	2 cut(s)	181, 607
Bme1390I	CCNGG	3 cut(s)	1680, 1959, 2375
Bme18I	GGWCC	4 cut(s)	329, 887, 1394, 1673
BmeRI	GACNNNNNGTC	1 cut(s)	567
BmeT110I	CYCGRG	1 cut(s)	225
BmgT120I	GGNCC	4 cut(s)	329, 887, 1394, 1673
BmiI	GGNNCC	1 cut(s)	520
BmrFI	CCNGG	3 cut(s)	1680, 1959, 2375
BmsI	GCATC	4 cut(s)	74, 434, 2193, 2402
BpiI	GAAGAC	8 cut(s)	617, 1044, 1119, 1320, 1621, 1631, 1788, 2358
BpmI	CTGGAG	1 cut(s)	1746
BpuEI	CTTGAG	8 cut(s)	793, 832, 854, 892, 1628, 2104, 2156, 2440
BpuMI	CCSGG	1 cut(s)	1959
BsaI	GGTCTC	1 cut(s)	2329
BsaJI	CCNNGG	1 cut(s)	2373
BsaWI	WCCGGW	2 cut(s)	125, 1618
BsaXI	ACNNNNNCTCC	2 cut(s)	1350, 1380
Bsc4I	CCNNNNNNNGG	4 cut(s)	1171, 1655, 1685, 1965
Bse1I	ACTGG	3 cut(s)	579, 1690, 2204
Bse21I	CCTNAGG	1 cut(s)	1470
Bse3DI	GCAATG	3 cut(s)	563, 1080, 2432
BseBI	CCWGG	2 cut(s)	1680, 2375
BseDI	CCNNGG	1 cut(s)	2373
BseGI	GGATG	3 cut(s)	449, 1855, 1945
BseLI	CCNNNNNNNGG	4 cut(s)	1171, 1655, 1685, 1965
BseMI	GCAATG	3 cut(s)	563, 1080, 2432
BseMII	CTCAG	5 cut(s)	474, 600, 1022, 1461, 2304
BseNI	ACTGG	3 cut(s)	579, 1690, 2204
BseRI	GAGGAG	1 cut(s)	1374
BseXI	GCAGC	6 cut(s)	640, 1084, 1829, 1994, 2179, 2368
Bsh1236I	CGCG	1 cut(s)	543
BsiHKAI	GWGCWC	2 cut(s)	617, 1804
BsiHKCI	CYCGRG	1 cut(s)	225
BsiSI	CCGG	3 cut(s)	126, 1619, 1959
BslFI	GGGAC	3 cut(s)	574, 1884, 2064
BslI	CCNNNNNNNGG	4 cut(s)	1171, 1655, 1685, 1965
BsmAI	GTCTC	4 cut(s)	375, 1272, 1750, 2329
BsmFI	GGGAC	3 cut(s)	574, 1884, 2064
Bso31I	GGTCTC	1 cut(s)	2329
BsoBI	CYCGRG	1 cut(s)	225
Bsp1286I	GDGCHC	2 cut(s)	617, 1804
Bsp143I	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
BspACI	CCGC	5 cut(s)	335, 682, 797, 960, 1635
BspCNI	CTCAG	5 cut(s)	475, 601, 1021, 1462, 2305
BspFNI	CGCG	1 cut(s)	543
BspLI	GGNNCC	1 cut(s)	520
BspMI	ACCTGC	1 cut(s)	310
BspPI	GGATC	1 cut(s)	1629
BspQI	GCTCTTC	2 cut(s)	5, 691
BspTI	CTTAAG	1 cut(s)	211
BspTNI	GGTCTC	1 cut(s)	2329
BsrBI	CCGCTC	2 cut(s)	684, 962
BsrDI	GCAATG	3 cut(s)	563, 1080, 2432
BsrI	ACTGG	3 cut(s)	579, 1690, 2204
BssECI	CCNNGG	1 cut(s)	2373
BssMI	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
BssSI	CACGAG	1 cut(s)	1013
Bst2BI	CACGAG	1 cut(s)	1013
Bst2UI	CCWGG	2 cut(s)	1680, 2375
Bst4CI	ACNGT	3 cut(s)	184, 1998, 2159
Bst6I	CTCTTC	4 cut(s)	5, 189, 691, 2249
BstAFI	CTTAAG	1 cut(s)	211
BstC8I	GCNNGC	2 cut(s)	357, 1701
BstDEI	CTNAG	8 cut(s)	483, 609, 1008, 1277, 1347, 1470, 1610, 2313
BstF5I	GGATG	3 cut(s)	449, 1855, 1945
BstFNI	CGCG	1 cut(s)	543
BstKTI	GATC	8 cut(s)	592, 987, 1307, 1624, 2005, 2082, 2170, 2242
BstMAI	GTCTC	4 cut(s)	375, 1272, 1750, 2329
BstMBI	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
BstMWI	GCNNNNNNNGC	5 cut(s)	311, 653, 1721, 2221, 2390
BstNI	CCWGG	2 cut(s)	1680, 2375
BstSCI	CCNGG	3 cut(s)	1678, 1957, 2373
BstSFI	CTRYAG	1 cut(s)	2155
BstUI	CGCG	1 cut(s)	543
BstV1I	GCAGC	6 cut(s)	640, 1084, 1829, 1994, 2179, 2368
BstV2I	GAAGAC	8 cut(s)	617, 1044, 1119, 1320, 1621, 1631, 1788, 2358
BstX2I	RGATCY	2 cut(s)	1621, 2079
BstXI	CCANNNNNNTGG	2 cut(s)	1295, 2135
BstYI	RGATCY	2 cut(s)	1621, 2079
Bsu36I	CCTNAGG	1 cut(s)	1470
BtgZI	GCGATG	1 cut(s)	1131
BtsCI	GGATG	3 cut(s)	449, 1855, 1945
BtsIMutI	CAGTG	3 cut(s)	586, 1338, 2164
BveI	ACCTGC	1 cut(s)	310
Cac8I	GCNNGC	2 cut(s)	357, 1701
CaiI	CAGNNNCTG	1 cut(s)	107
Cfr13I	GGNCC	4 cut(s)	329, 887, 1394, 1673
CseI	GACGC	1 cut(s)	557
CsiI	ACCWGGT	1 cut(s)	1678
Csp6I	GTAC	3 cut(s)	180, 606, 1683
CviAII	CATG	8 cut(s)	1045, 1271, 1650, 1750, 1895, 2129, 2347, 2356
CviQI	GTAC	3 cut(s)	180, 606, 1683
DdeI	CTNAG	8 cut(s)	483, 609, 1008, 1277, 1347, 1470, 1610, 2313
DpnI	GATC	8 cut(s)	591, 986, 1306, 1623, 2004, 2081, 2169, 2241
DpnII	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
DraI	TTTAAA	1 cut(s)	261
DriI	GACNNNNNGTC	1 cut(s)	567
Eam1104I	CTCTTC	4 cut(s)	5, 189, 691, 2249
Eam1105I	GACNNNNNGTC	1 cut(s)	567
EarI	CTCTTC	4 cut(s)	5, 189, 691, 2249
Ecl136II	GAGCTC	2 cut(s)	615, 1802
Eco24I	GRGCYC	2 cut(s)	617, 1804
Eco31I	GGTCTC	1 cut(s)	2329
Eco32I	GATATC	2 cut(s)	664, 1108
Eco47I	GGWCC	4 cut(s)	329, 887, 1394, 1673
Eco53kI	GAGCTC	2 cut(s)	615, 1802
Eco57I	CTGAAG	1 cut(s)	945
Eco81I	CCTNAGG	1 cut(s)	1470
Eco88I	CYCGRG	1 cut(s)	225
EcoICRI	GAGCTC	2 cut(s)	615, 1802
EcoRII	CCWGG	2 cut(s)	1678, 2373
EcoRV	GATATC	2 cut(s)	664, 1108
EcoT22I	ATGCAT	1 cut(s)	2186
EcoT38I	GRGCYC	2 cut(s)	617, 1804
FaeI	CATG	8 cut(s)	1048, 1274, 1653, 1753, 1898, 2132, 2350, 2359
FalI	AAGNNNNNCTT	4 cut(s)	1569, 1601, 1623, 1655
FaqI	GGGAC	3 cut(s)	574, 1884, 2064
FatI	CATG	8 cut(s)	1044, 1270, 1649, 1749, 1894, 2128, 2346, 2355
FauI	CCCGC	1 cut(s)	689
FauNDI	CATATG	1 cut(s)	250
FblI	GTMKAC	3 cut(s)	571, 945, 1754
Fnu4HI	GCNGC	6 cut(s)	654, 1098, 1818, 1983, 2193, 2382
FokI	GGATG	3 cut(s)	456, 1862, 1952
FriOI	GRGCYC	2 cut(s)	617, 1804
Fsp4HI	GCNGC	6 cut(s)	654, 1098, 1818, 1983, 2193, 2382
FspBI	CTAG	3 cut(s)	1328, 1565, 1731
GluI	GCNGC	6 cut(s)	654, 1098, 1818, 1983, 2193, 2382
GsuI	CTGGAG	1 cut(s)	1746
HapII	CCGG	3 cut(s)	126, 1619, 1959
HgaI	GACGC	1 cut(s)	557
Hin1II	CATG	8 cut(s)	1048, 1274, 1653, 1753, 1898, 2132, 2350, 2359
HincII	GTYRAC	3 cut(s)	237, 489, 572
HindII	GTYRAC	3 cut(s)	237, 489, 572
HindIII	AAGCTT	4 cut(s)	363, 827, 1241, 2307
HpaI	GTTAAC	1 cut(s)	489
HpaII	CCGG	3 cut(s)	126, 1619, 1959
HphI	GGTGA	2 cut(s)	115, 1973
Hpy166II	GTNNAC	7 cut(s)	237, 489, 572, 946, 1676, 1755, 1809
Hpy188I	TCNGA	9 cut(s)	291, 484, 661, 787, 841, 989, 1417, 2314, 2398
Hpy8I	GTNNAC	7 cut(s)	237, 489, 572, 946, 1676, 1755, 1809
Hpy99I	CGWCG	2 cut(s)	573, 740
HpyAV	CCTTC	7 cut(s)	532, 1286, 1440, 2067, 2144, 2393, 2441
HpyCH4III	ACNGT	3 cut(s)	184, 1998, 2159
HpyF10VI	GCNNNNNNNGC	5 cut(s)	311, 653, 1721, 2221, 2390
HpyF3I	CTNAG	8 cut(s)	483, 609, 1008, 1277, 1347, 1470, 1610, 2313
Hsp92II	CATG	8 cut(s)	1048, 1274, 1653, 1753, 1898, 2132, 2350, 2359
KspAI	GTTAAC	1 cut(s)	489
Kzo9I	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
LguI	GCTCTTC	2 cut(s)	5, 691
LmnI	GCTCC	3 cut(s)	4, 1727, 2402
Lsp1109I	GCAGC	6 cut(s)	640, 1084, 1829, 1994, 2179, 2368
LweI	GCATC	4 cut(s)	74, 434, 2193, 2402
MabI	ACCWGGT	1 cut(s)	1678
MaeI	CTAG	3 cut(s)	1328, 1565, 1731
MaeIII	GTNAC	3 cut(s)	184, 1160, 1540
MalI	GATC	8 cut(s)	591, 986, 1306, 1623, 2004, 2081, 2169, 2241
MbiI	CCGCTC	2 cut(s)	684, 962
MboI	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
MfeI	CAATTG	1 cut(s)	1710
MflI	RGATCY	2 cut(s)	1621, 2079
MhlI	GDGCHC	2 cut(s)	617, 1804
MluCI	AATT	6 cut(s)	159, 230, 338, 897, 1176, 1710
MlyI	GAGTC	6 cut(s)	114, 845, 1310, 1337, 1391, 1421
MmeI	TCCRAC	2 cut(s)	1856, 1867
Mph1103I	ATGCAT	1 cut(s)	2186
MroXI	GAANNNNTTC	5 cut(s)	198, 462, 646, 746, 1968
MseI	TTAA	7 cut(s)	212, 260, 423, 488, 594, 896, 1914
MslI	CAYNNNNRTG	3 cut(s)	579, 1049, 1938
MspA1I	CMGCKG	1 cut(s)	2192
MspCI	CTTAAG	1 cut(s)	211
MspI	CCGG	3 cut(s)	126, 1619, 1959
MspR9I	CCNGG	3 cut(s)	1680, 1959, 2375
MunI	CAATTG	1 cut(s)	1710
MvaI	CCWGG	2 cut(s)	1680, 2375
MvnI	CGCG	1 cut(s)	543
MwoI	GCNNNNNNNGC	5 cut(s)	311, 653, 1721, 2221, 2390
NciI	CCSGG	1 cut(s)	1959
NdeI	CATATG	1 cut(s)	250
NdeII	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
NlaIII	CATG	8 cut(s)	1048, 1274, 1653, 1753, 1898, 2132, 2350, 2359
NlaIV	GGNNCC	1 cut(s)	520
NmuCI	GTSAC	2 cut(s)	184, 1540
NsiI	ATGCAT	1 cut(s)	2186
OliI	CACNNNNGTG	1 cut(s)	579
PaeR7I	CTCGAG	1 cut(s)	225
PaqCI	CACCTGC	1 cut(s)	310
PciSI	GCTCTTC	2 cut(s)	5, 691
PdmI	GAANNNNTTC	5 cut(s)	198, 462, 646, 746, 1968
PkrI	GCNGC	6 cut(s)	655, 1099, 1819, 1984, 2194, 2383
PleI	GAGTC	6 cut(s)	114, 844, 1310, 1337, 1390, 1420
PpsI	GAGTC	6 cut(s)	114, 844, 1310, 1337, 1390, 1420
Psp124BI	GAGCTC	2 cut(s)	617, 1804
Psp6I	CCWGG	2 cut(s)	1678, 2373
PspGI	CCWGG	2 cut(s)	1678, 2373
PspN4I	GGNNCC	1 cut(s)	520
PspPI	GGNCC	4 cut(s)	329, 887, 1394, 1673
PstNI	CAGNNNCTG	1 cut(s)	107
PsuI	RGATCY	2 cut(s)	1621, 2079
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	3 cut(s)	181, 607, 1684
RsaNI	GTAC	3 cut(s)	180, 606, 1683
RseI	CAYNNNNRTG	3 cut(s)	579, 1049, 1938
SacI	GAGCTC	2 cut(s)	617, 1804
SalI	GTCGAC	1 cut(s)	570
SapI	GCTCTTC	2 cut(s)	5, 691
SaqAI	TTAA	7 cut(s)	212, 260, 423, 488, 594, 896, 1914
SatI	GCNGC	6 cut(s)	654, 1098, 1818, 1983, 2193, 2382
Sau3AI	GATC	8 cut(s)	589, 984, 1304, 1621, 2002, 2079, 2167, 2239
Sau96I	GGNCC	4 cut(s)	329, 887, 1394, 1673
ScaI	AGTACT	2 cut(s)	181, 607
SchI	GAGTC	6 cut(s)	114, 845, 1310, 1337, 1391, 1421
ScrFI	CCNGG	3 cut(s)	1680, 1959, 2375
SduI	GDGCHC	2 cut(s)	617, 1804
SexAI	ACCWGGT	1 cut(s)	1678
SfaNI	GCATC	4 cut(s)	74, 434, 2193, 2402
SfcI	CTRYAG	1 cut(s)	2155
Sfr274I	CTCGAG	1 cut(s)	225
SinI	GGWCC	4 cut(s)	329, 887, 1394, 1673
SlaI	CTCGAG	1 cut(s)	225
SmiMI	CAYNNNNRTG	3 cut(s)	579, 1049, 1938
Sse9I	AATT	6 cut(s)	159, 230, 338, 897, 1176, 1710
SsiI	CCGC	5 cut(s)	335, 682, 797, 960, 1635
SspMI	CTAG	3 cut(s)	1328, 1565, 1731
SstI	GAGCTC	2 cut(s)	617, 1804
StyD4I	CCNGG	3 cut(s)	1678, 1957, 2373
TaaI	ACNGT	3 cut(s)	184, 1998, 2159
TaqII	GACCGA	1 cut(s)	1661
TasI	AATT	6 cut(s)	159, 230, 338, 897, 1176, 1710
TatI	WGTACW	2 cut(s)	179, 605
Tru1I	TTAA	7 cut(s)	212, 260, 423, 488, 594, 896, 1914
Tru9I	TTAA	7 cut(s)	212, 260, 423, 488, 594, 896, 1914
TscAI	CASTG	3 cut(s)	586, 1345, 2164
TseFI	GTSAC	2 cut(s)	184, 1540
TseI	GCWGC	6 cut(s)	653, 1097, 1817, 1982, 2192, 2381
Tsp45I	GTSAC	2 cut(s)	184, 1540
TspDTI	ATGAA	9 cut(s)	245, 1017, 1061, 1726, 1734, 1866, 1911, 2025, 2426
TspGWI	ACGGA	2 cut(s)	192, 1251
TspRI	CASTG	3 cut(s)	586, 1345, 2164
Vha464I	CTTAAG	1 cut(s)	211
VpaK11BI	GGWCC	4 cut(s)	329, 887, 1394, 1673
XapI	RAATTY	1 cut(s)	338
XbaI	TCTAGA	1 cut(s)	1564
XhoI	CTCGAG	1 cut(s)	225
XmiI	GTMKAC	3 cut(s)	571, 945, 1754
XmnI	GAANNNNTTC	5 cut(s)	198, 462, 646, 746, 1968
XspI	CTAG	3 cut(s)	1328, 1565, 1731
ZrmI	AGTACT	2 cut(s)	181, 607
Zsp2I	ATGCAT	1 cut(s)	2186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.