Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004289

Physical Location & Seq

Genomic Coordinates Reverse (-)

29030869 .. 29037114

Gene Structure 6246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G303900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGAACAGAAGCACATTTTCTTGTCTGCTCTGAGTGTTGGGGTTGGGGTTGGGGTGGGCCTGGGGTTGAGTTCTGGGCAGGCTGTGAGCAAATGGGTAAACGGTAATTGCTCGGCCGATGAGGTTACCGCGGAGCAGATTGAACAGGAGCTGATGAGGCAGGTGCTGGATGGCAGAAACAGCAAAGTTACATTTGAGGAGTTTCCTTATTACCTAAGAGAAAGAACTCGGATGTTGTTAACAAGTGCTGCATATGTTCATCTGAAACACTCTGACTTATCCAAGCATACCCGGAACCTTTCACCTGCAAGTAGAGCTATTTTGCTCTCAGGACCTGCTGAACTTTATCATCAAGTGCTCGCCAAGGCTTTAGCACATTACTTTGAGTCGAAGTTGCTGTTGTTGGACATTACTGACTTTTCTATCAAGATCCAGAGTAAATATGGGTGTGCCAAAAGAGAACCTTATCTTAAGAGGTCTATCTCAGAGGTGACAATGGAGCGAATGTCCAGTTTGCTTGGGTCTTTCTCAATCCTCCCTTCAAGTGGGGACAGTAAAGGCACATTATGCCGGCAAAGCAGTACTACAGATCTCAAATCAAGGGGCGCTGAAGGGCCAAATAATTCAACGCTTCAAAGAAATGCCTCCTCTGCATCTGATATGAGTAGCTTCAGTTCCAAATGTGCTCCCACAAGTTCAGCTCCTCTCAAACGCGTGACCAGCTGGTGTTTCGATGAGAAACTTTTTCTACAGTCACTTTACAAGGTCTTAGCTTCCATATCAGAAACTGGTTCGATCATTTTATACATCAGGGATGTTGAGAAGCTTTTTCTCCAATCACGGCGGTTATACAATTTGTTCAATAAAATGTTGAAGAGACTTTCAGGGTCAGTGTTAATACTTGGTTCCCGGATGTTAGACGCTGAAGATGATTGCAAAGAAGTTGATGAGAGGCTTGCTGGTTTGTTCCCATACAATATTGAGATCAGCCCCCCTGAAGATGAGACTCATCTTGTCAGCTGGAAAGCCCAACTGGAAGAGGACATGAAGATGATCCAGTTCCACGATAACAAAAACCACATAGCTGAGGTACTTGCATCAAATGATCTTGAGTGTGACGATCTAGGTTCCATCTGCCATGCAGACACAATGGTCCTCAGCAACTACATAGAAGAAATCGTTGTATCAGCGATATCTTATCATTTGATGCAAAACAAGGATCCAGAATATAGAAATGGAAAGCTTGTCATATCATCAACGAGTTTGTCCCATGGATTGAGTATATTCCAGGAGGGAAAAAGTGGCGGGAAAGATTCTCTGAAACTGGAGACCAATGCTGATTCCAATAAGGAAACTGAAGGGGAAGAGGCTGTCGGTGCAAAGACTGAAACAGAGAAATCTGGTCCTGCAGTAAAGAAGGACAGCGAGAATCCACCTCCGCCAAAAGTTGTAAGTTCAATTGCACCTGACAATGAATTTGAGAAGCGCATAAGGCCAGAGGTTATCCCTGCAAATGAGATTGGAGTCACATTTGCAGACATTGGTGCATTGGATGATATTAAAGAATCACTTCAGGAGTTGGTCATGCTCCCGCTTCGAAGACCAGACCTTTTCAAAGGTGGGCTTCTTAAGCCTTGTAGAGGCATTTTGCTTTTTGGTCCTCCTGGCACTGGAAAAACAATGCTAGCAAAAGCCATTGCAAATGAAGCGGGAGCAAGTTTTATCAATGTCTCGATGTCCACCATCACTTCAAAATGGTTTGGAGAAGATGAAAAAAACGTCCGAGCTCTGTTCACACTTGCAGCAAAGGTCTCCCCAACTATTATCTTTGTGGATGAAGTTGACAGCATGCTTGGGCAGAGGACCAGAGTTGGGGAGCATGAGGCCATGAGGAAGATAAAAAACGAGTTCATGACACACTGGGATGGGCTGTTGACAAAAACCGGAGAGCGAATTCTTGTTCTGGCTGCAACCAACAGACCATTTGACCTTGATGAAGCAATCATCAGGCGGTTTGAGCGCAGAGTCATGGTTGGTCTTCCCTCCGTCGAGAATAGGGAAATGATCTTGAAAACTCTTCTTTCAAAAGAAAAGGTTGAAAATCTAGACTTCAAGGAGCTTGCAACCATGACAGAAGGTTACAGTGGCAGTGATCTTAAGAACTTGTGTGTGACAGCAGCTTATCGACCTGTGAGGGAGCTTATACAACAGGAGAGACAAAAGGATATGGAAAAGAAGAAGAGAGAAGCACAAGGCAAGAGCACAGAAGATGCTTCAGAGACAAAAGAGGAAGAGAAAGAGGACCAAGAAATTACTCTGAGAGCTTTAAACATGGAAGATATGCGGCAGGCAAAGAATCAGGTTGCTGCCAGTTTCGCTTCAGAGGGTTCAGTAATGAGTGAGCTGAAACAGTGGAATGATTTGTACGGAGAAGGTGGCTCAAGGAAGAAGCAACAACTCACTTACTTCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

825

Amino Acids

91.86

Weight (kDa)

5.82

Isoelectric Point (pI)

46.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28000 AT4G28000 AT4G28000 AT5G52882
fragaria_vesca	FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620
malus_domestica	MD01G1211300.v1.1 MD07G1282000.v1.1
prunus_persica	Prupe.2G303900_v2.0.a1 Prupe.2G303900_v2.0.a1
pyrus_communis	pycom01g22180 pycom07g25590
rosa_chinensis	RchiOBHm_Chr1g0379521
rosa_laevigata	RLG00000026395
rosa_multiflora	Rmu_sc0006761.1_g000024
rosa_roxburghii	Rroxscaffold_4G00280110
rosa_rugosa	Rorug01G0412600 Rorug01G0412700 Rorug01G0412800.1 Rorug01G0412900
rosa_samantha	Rh1AG435400 Rh1BG392800 Rh1CG405400 Rh1DG423600
rosa_wichuraiana	Rw1G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	151, 313
AasI	GACNNNNNNGTC	1 cut(s)	1151
Acc36I	ACCTGC	3 cut(s)	151, 313, 343
AccII	CGCG	2 cut(s)	131, 714
AciI	CCGC	9 cut(s)	129, 131, 844, 1305, 1439, 1592, 1709, 2011, 2344
AclWI	GGATC	4 cut(s)	424, 1048, 1214, 1227
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	2 cut(s)	1475, 1953
AcuI	CTGAAG	8 cut(s)	630, 655, 945, 1017, 1377, 1556, 2259, 2364
AfaI	GTAC	3 cut(s)	583, 1092, 2426
AfiI	CCNNNNNNNGG	4 cut(s)	545, 1640, 1670, 1872
AflII	CTTAAG	3 cut(s)	470, 1628, 2156
AflIII	ACRYGT	1 cut(s)	712
AjnI	CCWGG	3 cut(s)	60, 1287, 1663
Alw21I	GWGCWC	4 cut(s)	360, 688, 1789, 2264
Alw26I	GTCTC	7 cut(s)	871, 998, 1322, 1735, 1816, 2209, 2273
AlwI	GGATC	4 cut(s)	424, 1048, 1214, 1227
AlwNI	CAGNNNCTG	4 cut(s)	151, 166, 335, 788
AoxI	GGCC	5 cut(s)	58, 114, 614, 1493, 1884
ApeKI	GCWGC	5 cut(s)	248, 1802, 1967, 2177, 2366
ApoI	RAATTY	2 cut(s)	1475, 1953
ArsI	GACNNNNNNTTYG	2 cut(s)	1460, 1492
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspLEI	GCGC	3 cut(s)	608, 1488, 2022
AspS9I	GGNCC	8 cut(s)	58, 332, 614, 1153, 1403, 1658, 1863, 2302
AsuC2I	CCSGG	2 cut(s)	292, 910
AsuHPI	GGTGA	2 cut(s)	294, 502
AsuII	TTCGAA	1 cut(s)	1597
AsuNHI	GCTAGC	1 cut(s)	1684
AvaII	GGWCC	6 cut(s)	332, 1153, 1403, 1658, 1863, 2302
BamHI	GGATCC	1 cut(s)	1219
BanII	GRGCYC	1 cut(s)	1789
BbsI	GAAGAC	2 cut(s)	1606, 2030
Bbv12I	GWGCWC	4 cut(s)	360, 688, 1789, 2264
BbvCI	CCTCAGC	2 cut(s)	1086, 1157
BbvI	GCAGC	5 cut(s)	235, 1814, 1954, 2189, 2353
BccI	CCATC	4 cut(s)	164, 1139, 1751, 1919
BceAI	ACGGC	1 cut(s)	857
BciT130I	CCWGG	3 cut(s)	62, 1289, 1665
BcnI	CCSGG	2 cut(s)	292, 910
BcoDI	GTCTC	7 cut(s)	871, 998, 1322, 1735, 1816, 2209, 2273
BfaI	CTAG	3 cut(s)	1124, 1685, 2105
BfmI	CTRYAG	3 cut(s)	585, 749, 1407
BfoI	RGCGCY	1 cut(s)	609
BfrI	CTTAAG	3 cut(s)	470, 1628, 2156
BfuAI	ACCTGC	3 cut(s)	151, 313, 343
BglII	AGATCT	1 cut(s)	589
BisI	GCNGC	6 cut(s)	249, 1803, 1968, 2178, 2345, 2367
BlsI	GCNGC	6 cut(s)	250, 1804, 1969, 2179, 2346, 2368
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	5 cut(s)	62, 292, 910, 1289, 1665
Bme18I	GGWCC	6 cut(s)	332, 1153, 1403, 1658, 1863, 2302
BmgT120I	GGNCC	8 cut(s)	58, 332, 614, 1153, 1403, 1658, 1863, 2302
BmiI	GGNNCC	4 cut(s)	296, 907, 1129, 1221
BmrFI	CCNGG	5 cut(s)	62, 292, 910, 1289, 1665
BmrI	ACTGGG	1 cut(s)	1930
BmsI	GCATC	4 cut(s)	662, 1106, 1197, 2260
BmtI	GCTAGC	1 cut(s)	1688
BmuI	ACTGGG	1 cut(s)	1930
BpiI	GAAGAC	2 cut(s)	1606, 2030
BpmI	CTGGAG	1 cut(s)	1346
Bpu10I	CCTNAGC	2 cut(s)	1086, 1157
Bpu14I	TTCGAA	1 cut(s)	1597
BpuEI	CTTGAG	2 cut(s)	1130, 2425
BpuMI	CCSGG	2 cut(s)	292, 910
BsaI	GGTCTC	2 cut(s)	1322, 1816
BsaJI	CCNNGG	4 cut(s)	61, 129, 363, 1270
BsaWI	WCCGGW	1 cut(s)	1943
BsaXI	ACNNNNNCTCC	2 cut(s)	491, 521
Bsc4I	CCNNNNNNNGG	4 cut(s)	545, 1640, 1670, 1872
Bse118I	RCCGGY	1 cut(s)	570
Bse1I	ACTGG	8 cut(s)	510, 793, 1038, 1057, 1329, 1675, 1925, 2370
Bse3DI	GCAATG	1 cut(s)	1695
BseBI	CCWGG	3 cut(s)	62, 1289, 1665
BseDI	CCNNGG	4 cut(s)	61, 129, 363, 1270
BseGI	GGATG	7 cut(s)	175, 237, 820, 918, 1558, 1840, 1930
BseLI	CCNNNNNNNGG	4 cut(s)	545, 1640, 1670, 1872
BseMI	GCAATG	1 cut(s)	1695
BseMII	CTCAG	6 cut(s)	23, 342, 498, 1077, 1171, 2309
BseNI	ACTGG	8 cut(s)	510, 793, 1038, 1057, 1329, 1675, 1925, 2370
BseRI	GAGGAG	3 cut(s)	212, 637, 693
BseX3I	CGGCCG	1 cut(s)	114
BseXI	GCAGC	5 cut(s)	235, 1814, 1954, 2189, 2353
Bsh1236I	CGCG	2 cut(s)	131, 714
Bsh1285I	CGRYCG	1 cut(s)	117
BshFI	GGCC	5 cut(s)	60, 116, 616, 1495, 1886
BsiEI	CGRYCG	1 cut(s)	117
BsiHKAI	GWGCWC	4 cut(s)	360, 688, 1789, 2264
BsiSI	CCGG	4 cut(s)	292, 571, 910, 1944
BslFI	GGGAC	2 cut(s)	563, 1252
BslI	CCNNNNNNNGG	4 cut(s)	545, 1640, 1670, 1872
BsmAI	GTCTC	7 cut(s)	871, 998, 1322, 1735, 1816, 2209, 2273
BsmFI	GGGAC	2 cut(s)	563, 1252
BsnI	GGCC	5 cut(s)	60, 116, 616, 1495, 1886
Bso31I	GGTCTC	2 cut(s)	1322, 1816
Bsp119I	TTCGAA	1 cut(s)	1597
Bsp1286I	GDGCHC	4 cut(s)	360, 688, 1789, 2264
Bsp19I	CCATGG	1 cut(s)	1270
BspACI	CCGC	9 cut(s)	129, 131, 844, 1305, 1439, 1592, 1709, 2011, 2344
BspANI	GGCC	5 cut(s)	60, 116, 616, 1495, 1886
BspCNI	CTCAG	6 cut(s)	24, 341, 497, 1078, 1170, 2310
BspFNI	CGCG	2 cut(s)	131, 714
BspHI	TCATGA	1 cut(s)	1911
BspLI	GGNNCC	4 cut(s)	296, 907, 1129, 1221
BspMAI	CTGCAG	1 cut(s)	1411
BspMI	ACCTGC	3 cut(s)	151, 313, 343
BspOI	GCTAGC	1 cut(s)	1688
BspPI	GGATC	4 cut(s)	424, 1048, 1214, 1227
BspT104I	TTCGAA	1 cut(s)	1597
BspTI	CTTAAG	3 cut(s)	470, 1628, 2156
BspTNI	GGTCTC	2 cut(s)	1322, 1816
BsrDI	GCAATG	1 cut(s)	1695
BsrFI	RCCGGY	1 cut(s)	570
BsrI	ACTGG	8 cut(s)	510, 793, 1038, 1057, 1329, 1675, 1925, 2370
BssAI	RCCGGY	1 cut(s)	570
BssECI	CCNNGG	4 cut(s)	61, 129, 363, 1270
BssT1I	CCWWGG	2 cut(s)	363, 1270
Bst2UI	CCWGG	3 cut(s)	62, 1289, 1665
Bst4CI	ACNGT	5 cut(s)	104, 554, 753, 2144, 2412
Bst6I	CTCTTC	6 cut(s)	869, 1032, 1359, 2082, 2234, 2286
BstAFI	CTTAAG	3 cut(s)	470, 1628, 2156
BstAPI	GCANNNNNTGC	1 cut(s)	567
BstBI	TTCGAA	1 cut(s)	1597
BstC8I	GCNNGC	8 cut(s)	81, 360, 572, 957, 1686, 1850, 2121, 2349
BstDEI	CTNAG	8 cut(s)	32, 215, 328, 484, 769, 1086, 1157, 2318
BstDSI	CCRYGG	2 cut(s)	129, 1270
BstEII	GGTNACC	1 cut(s)	124
BstENI	CCTNNNNNAGG	1 cut(s)	1638
BstF5I	GGATG	7 cut(s)	175, 237, 820, 918, 1558, 1840, 1930
BstFNI	CGCG	2 cut(s)	131, 714
BstH2I	RGCGCY	1 cut(s)	609
BstHHI	GCGC	3 cut(s)	608, 1488, 2022
BstMAI	GTCTC	7 cut(s)	871, 998, 1322, 1735, 1816, 2209, 2273
BstMCI	CGRYCG	1 cut(s)	117
BstNI	CCWGG	3 cut(s)	62, 1289, 1665
BstNSI	RCATGY	1 cut(s)	1852
BstPI	GGTNACC	1 cut(s)	124
BstSCI	CCNGG	5 cut(s)	60, 290, 908, 1287, 1663
BstSFI	CTRYAG	3 cut(s)	585, 749, 1407
BstUI	CGCG	2 cut(s)	131, 714
BstV1I	GCAGC	5 cut(s)	235, 1814, 1954, 2189, 2353
BstV2I	GAAGAC	2 cut(s)	1606, 2030
BstX2I	RGATCY	3 cut(s)	429, 589, 1219
BstYI	RGATCY	3 cut(s)	429, 589, 1219
BstZI	CGGCCG	1 cut(s)	114
BsuRI	GGCC	5 cut(s)	60, 116, 616, 1495, 1886
BtgI	CCRYGG	2 cut(s)	129, 1270
BtsCI	GGATG	7 cut(s)	175, 237, 820, 918, 1558, 1840, 1930
BtsI	GCAGTG	1 cut(s)	2155
BtsIMutI	CAGTG	6 cut(s)	897, 1668, 1918, 2149, 2155, 2417
BveI	ACCTGC	3 cut(s)	151, 313, 343
Cac8I	GCNNGC	8 cut(s)	81, 360, 572, 957, 1686, 1850, 2121, 2349
CaiI	CAGNNNCTG	4 cut(s)	151, 166, 335, 788
CciI	TCATGA	1 cut(s)	1911
CfoI	GCGC	3 cut(s)	608, 1488, 2022
Cfr10I	RCCGGY	1 cut(s)	570
Cfr13I	GGNCC	8 cut(s)	58, 332, 614, 1153, 1403, 1658, 1863, 2302
Cfr42I	CCGCGG	1 cut(s)	132
CseI	GACGC	1 cut(s)	929
Csp6I	GTAC	3 cut(s)	582, 1091, 2425
CviQI	GTAC	3 cut(s)	582, 1091, 2425
DdeI	CTNAG	8 cut(s)	32, 215, 328, 484, 769, 1086, 1157, 2318
DraI	TTTAAA	1 cut(s)	2328
DrdI	GACNNNNNNGTC	1 cut(s)	1151
DseDI	GACNNNNNNGTC	1 cut(s)	1151
EaeI	YGGCCR	1 cut(s)	114
EagI	CGGCCG	1 cut(s)	114
Eam1104I	CTCTTC	6 cut(s)	869, 1032, 1359, 2082, 2234, 2286
EarI	CTCTTC	6 cut(s)	869, 1032, 1359, 2082, 2234, 2286
EciI	GGCGGA	1 cut(s)	1428
Ecl136II	GAGCTC	1 cut(s)	1787
EclXI	CGGCCG	1 cut(s)	114
Eco130I	CCWWGG	2 cut(s)	363, 1270
Eco24I	GRGCYC	1 cut(s)	1789
Eco31I	GGTCTC	2 cut(s)	1322, 1816
Eco32I	GATATC	1 cut(s)	1194
Eco47I	GGWCC	6 cut(s)	332, 1153, 1403, 1658, 1863, 2302
Eco52I	CGGCCG	1 cut(s)	114
Eco53kI	GAGCTC	1 cut(s)	1787
Eco57I	CTGAAG	8 cut(s)	630, 655, 945, 1017, 1377, 1556, 2259, 2364
Eco91I	GGTNACC	1 cut(s)	124
EcoICRI	GAGCTC	1 cut(s)	1787
EcoNI	CCTNNNNNAGG	1 cut(s)	1638
EcoO109I	RGGNCCY	1 cut(s)	332
EcoO65I	GGTNACC	1 cut(s)	124
EcoRI	GAATTC	1 cut(s)	1953
EcoRII	CCWGG	3 cut(s)	60, 1287, 1663
EcoRV	GATATC	1 cut(s)	1194
EcoT14I	CCWWGG	2 cut(s)	363, 1270
EcoT38I	GRGCYC	1 cut(s)	1789
ErhI	CCWWGG	2 cut(s)	363, 1270
FalI	AAGNNNNNCTT	6 cut(s)	448, 480, 1554, 1586, 1608, 1640
FaqI	GGGAC	2 cut(s)	563, 1252
FauI	CCCGC	3 cut(s)	1298, 1599, 1702
FauNDI	CATATG	1 cut(s)	253
Fnu4HI	GCNGC	6 cut(s)	249, 1803, 1968, 2178, 2345, 2367
FokI	GGATG	7 cut(s)	182, 244, 827, 925, 1565, 1847, 1937
FriOI	GRGCYC	1 cut(s)	1789
Fsp4HI	GCNGC	6 cut(s)	249, 1803, 1968, 2178, 2345, 2367
FspBI	CTAG	3 cut(s)	1124, 1685, 2105
GlaI	GCGC	3 cut(s)	607, 1487, 2021
GluI	GCNGC	6 cut(s)	249, 1803, 1968, 2178, 2345, 2367
GsuI	CTGGAG	1 cut(s)	1346
HaeII	RGCGCY	1 cut(s)	609
HaeIII	GGCC	5 cut(s)	60, 116, 616, 1495, 1886
HapII	CCGG	4 cut(s)	292, 571, 910, 1944
HgaI	GACGC	1 cut(s)	929
HhaI	GCGC	3 cut(s)	608, 1488, 2022
Hin6I	GCGC	3 cut(s)	606, 1486, 2020
HinP1I	GCGC	3 cut(s)	606, 1486, 2020
HincII	GTYRAC	3 cut(s)	240, 1843, 1935
HindII	GTYRAC	3 cut(s)	240, 1843, 1935
HindIII	AAGCTT	2 cut(s)	824, 1241
HinfI	GANTC	9 cut(s)	386, 1006, 1313, 1340, 1429, 1524, 1565, 2025, 2356
HpaI	GTTAAC	1 cut(s)	240
HpaII	CCGG	4 cut(s)	292, 571, 910, 1944
HphI	GGTGA	2 cut(s)	294, 502
Hpy166II	GTNNAC	6 cut(s)	100, 240, 1740, 1794, 1843, 1935
Hpy8I	GTNNAC	6 cut(s)	100, 240, 1740, 1794, 1843, 1935
Hpy99I	CGWCG	1 cut(s)	2051
HpyAV	CCTTC	6 cut(s)	549, 605, 1352, 1411, 2129, 2426
HpyCH4III	ACNGT	5 cut(s)	104, 554, 753, 2144, 2412
HpyCH4IV	ACGT	1 cut(s)	1779
HpyF3I	CTNAG	8 cut(s)	32, 215, 328, 484, 769, 1086, 1157, 2318
HpySE526I	ACGT	1 cut(s)	1779
HspAI	GCGC	3 cut(s)	606, 1486, 2020
KroI	GCCGGC	1 cut(s)	570
KroNI	GCCGGC	1 cut(s)	572
KspAI	GTTAAC	1 cut(s)	240
KspI	CCGCGG	1 cut(s)	132
Lsp1109I	GCAGC	5 cut(s)	235, 1814, 1954, 2189, 2353
LweI	GCATC	4 cut(s)	662, 1106, 1197, 2260
MaeI	CTAG	3 cut(s)	1124, 1685, 2105
MaeII	ACGT	1 cut(s)	1779
MaeIII	GTNAC	9 cut(s)	124, 187, 490, 715, 753, 1115, 1525, 2138, 2170
MfeI	CAATTG	1 cut(s)	1458
MflI	RGATCY	3 cut(s)	429, 589, 1219
MhlI	GDGCHC	4 cut(s)	360, 688, 1789, 2264
MluCI	AATT	7 cut(s)	106, 622, 853, 1458, 1475, 1953, 2310
MluI	ACGCGT	1 cut(s)	712
MlyI	GAGTC	4 cut(s)	395, 1000, 1533, 2034
MmeI	TCCRAC	1 cut(s)	384
MroNI	GCCGGC	1 cut(s)	570
MroXI	GAANNNNTTC	1 cut(s)	1569
MseI	TTAA	7 cut(s)	239, 471, 896, 1560, 1629, 2157, 2327
MslI	CAYNNNNRTG	2 cut(s)	1049, 1923
MspA1I	CMGCKG	3 cut(s)	131, 723, 1020
MspCI	CTTAAG	3 cut(s)	470, 1628, 2156
MspI	CCGG	4 cut(s)	292, 571, 910, 1944
MspR9I	CCNGG	5 cut(s)	62, 292, 910, 1289, 1665
MunI	CAATTG	1 cut(s)	1458
MvaI	CCWGG	3 cut(s)	62, 1289, 1665
MvnI	CGCG	2 cut(s)	131, 714
NaeI	GCCGGC	1 cut(s)	572
NciI	CCSGG	2 cut(s)	292, 910
NcoI	CCATGG	1 cut(s)	1270
NdeI	CATATG	1 cut(s)	253
NgoMIV	GCCGGC	1 cut(s)	570
NheI	GCTAGC	1 cut(s)	1684
NlaIV	GGNNCC	4 cut(s)	296, 907, 1129, 1221
NmeAIII	GCCGAG	1 cut(s)	92
NmuCI	GTSAC	6 cut(s)	490, 715, 753, 1115, 1525, 2170
NspI	RCATGY	1 cut(s)	1852
NspV	TTCGAA	1 cut(s)	1597
PaeI	GCATGC	1 cut(s)	1852
PagI	TCATGA	1 cut(s)	1911
PaqCI	CACCTGC	2 cut(s)	151, 313
PdiI	GCCGGC	1 cut(s)	572
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	5 cut(s)	1313, 1340, 1429, 1565, 2356
PfoI	TCCNGGA	2 cut(s)	908, 1287
PkrI	GCNGC	6 cut(s)	250, 1804, 1969, 2179, 2346, 2368
PleI	GAGTC	4 cut(s)	394, 1000, 1532, 2033
PpsI	GAGTC	4 cut(s)	394, 1000, 1532, 2033
PpuMI	RGGWCCY	1 cut(s)	332
Psp124BI	GAGCTC	1 cut(s)	1789
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	3 cut(s)	60, 1287, 1663
PspEI	GGTNACC	1 cut(s)	124
PspGI	CCWGG	3 cut(s)	60, 1287, 1663
PspN4I	GGNNCC	4 cut(s)	296, 907, 1129, 1221
PspPI	GGNCC	8 cut(s)	58, 332, 614, 1153, 1403, 1658, 1863, 2302
PspPPI	RGGWCCY	1 cut(s)	332
PsrI	GAACNNNNNNTAC	2 cut(s)	658, 690
PstI	CTGCAG	1 cut(s)	1411
PstNI	CAGNNNCTG	4 cut(s)	151, 166, 335, 788
PsuI	RGATCY	3 cut(s)	429, 589, 1219
PvuII	CAGCTG	2 cut(s)	723, 1020
RsaI	GTAC	3 cut(s)	583, 1092, 2426
RsaNI	GTAC	3 cut(s)	582, 1091, 2425
RseI	CAYNNNNRTG	2 cut(s)	1049, 1923
SacI	GAGCTC	1 cut(s)	1789
SacII	CCGCGG	1 cut(s)	132
SaqAI	TTAA	7 cut(s)	239, 471, 896, 1560, 1629, 2157, 2327
SatI	GCNGC	6 cut(s)	249, 1803, 1968, 2178, 2345, 2367
Sau96I	GGNCC	8 cut(s)	58, 332, 614, 1153, 1403, 1658, 1863, 2302
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	4 cut(s)	395, 1000, 1533, 2034
ScrFI	CCNGG	5 cut(s)	62, 292, 910, 1289, 1665
SduI	GDGCHC	4 cut(s)	360, 688, 1789, 2264
SfaNI	GCATC	4 cut(s)	662, 1106, 1197, 2260
SfcI	CTRYAG	3 cut(s)	585, 749, 1407
Sfr303I	CCGCGG	1 cut(s)	132
SfuI	TTCGAA	1 cut(s)	1597
SgrBI	CCGCGG	1 cut(s)	132
SinI	GGWCC	6 cut(s)	332, 1153, 1403, 1658, 1863, 2302
SmiMI	CAYNNNNRTG	2 cut(s)	1049, 1923
SmlI	CTYRAG	5 cut(s)	470, 1109, 1628, 2156, 2440
SmoI	CTYRAG	5 cut(s)	470, 1109, 1628, 2156, 2440
SphI	GCATGC	1 cut(s)	1852
Sse9I	AATT	7 cut(s)	106, 622, 853, 1458, 1475, 1953, 2310
SsiI	CCGC	9 cut(s)	129, 131, 844, 1305, 1439, 1592, 1709, 2011, 2344
SspI	AATATT	1 cut(s)	979
SspMI	CTAG	3 cut(s)	1124, 1685, 2105
SstI	GAGCTC	1 cut(s)	1789
StyD4I	CCNGG	5 cut(s)	60, 290, 908, 1287, 1663
StyI	CCWWGG	2 cut(s)	363, 1270
TaaI	ACNGT	5 cut(s)	104, 554, 753, 2144, 2412
TaiI	ACGT	1 cut(s)	1782
TaqI	TCGA	7 cut(s)	389, 732, 794, 1597, 1733, 2049, 2185
TasI	AATT	7 cut(s)	106, 622, 853, 1458, 1475, 1953, 2310
TatI	WGTACW	1 cut(s)	581
TauI	GCSGC	1 cut(s)	2347
TfiI	GAWTC	5 cut(s)	1313, 1340, 1429, 1565, 2356
Tru1I	TTAA	7 cut(s)	239, 471, 896, 1560, 1629, 2157, 2327
Tru9I	TTAA	7 cut(s)	239, 471, 896, 1560, 1629, 2157, 2327
TscAI	CASTG	6 cut(s)	897, 1675, 1925, 2149, 2155, 2417
TseFI	GTSAC	6 cut(s)	490, 715, 753, 1115, 1525, 2170
TseI	GCWGC	5 cut(s)	248, 1802, 1967, 2177, 2366
Tsp45I	GTSAC	6 cut(s)	490, 715, 753, 1115, 1525, 2170
TspDTI	ATGAA	8 cut(s)	248, 1061, 1488, 1719, 1785, 1851, 1900, 2010
TspGWI	ACGGA	2 cut(s)	2035, 2442
TspRI	CASTG	6 cut(s)	897, 1675, 1925, 2149, 2155, 2417
Vha464I	CTTAAG	3 cut(s)	470, 1628, 2156
VpaK11BI	GGWCC	6 cut(s)	332, 1153, 1403, 1658, 1863, 2302
XagI	CCTNNNNNAGG	1 cut(s)	1638
XapI	RAATTY	2 cut(s)	1475, 1953
XbaI	TCTAGA	1 cut(s)	2104
XceI	RCATGY	1 cut(s)	1852
XcmI	CCANNNNNNNNNTGG	1 cut(s)	440
XmnI	GAANNNNTTC	1 cut(s)	1569
XspI	CTAG	3 cut(s)	1124, 1685, 2105
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.