Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0004289

Physical Location & Seq

Genomic Coordinates Reverse (-)

34501590 .. 34507075

Gene Structure 5486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1282000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGAACAGAAGCACATTCTGCTGTCTGCTCTGAGTGTTGGGGTTGGGGTTGGGGTGGGGCTGGGATTGAGTTCCGGGCAGGCTGTGAGCAAATGGGTAAACGGCAATTGCTCGGCGGATGAGGTGACGGCGGAGCAGATTGAGCAGGAGTTGATGAGGCAGGTGGTAGATGGCAGAGACAGCAAAGTTACATTTGAGGAGTTTCCTTATTATCTAAGAGAGAGAACTCGGATGTTGTTAACAAGTGCTGCATATGTTCATCTGAAGCACTCCGACTTATCCAAGCACACCCGGAATCTTTCACCTGCAAGTAGAGCTATTTTGCTCTCAGGACCTGCAGAACTTTATCATCAAATGCTCGCCAAGGCTTTAGCGCATTACTTTGAGTCGAAGTTGCTGCTGTTGGATATAACTGATTTTTCGATCAAGATACAGAGTAAATACGGCTGTGCCAAAAGAGAATCACATCATAAGAGGTCCATCTCAGAGGTTACGTTGGAGCAAATGTCCAATTTGCTCGGTTCCTTCTCAATGCTCCCTTCACGCGGGGACACTAAAGGTACGTTATTTCGGCAAAGCAGTTCTTCTGATCTCAAATCAAGGGGAACAGAAGGGCCAACTGGAACGCTTCAAAGAAATGCCTCTTCTGCATCTGATATGAGTAGCATGAGTTCCAAATCTGCTTCGCCAAGTTCAGCTCCTATCAAGCGCGTGAGCAACTGGTGTTTCGATGAGAAACTTTTTCTGCAGTCACTGTACAAGGTCTTATCTTCGATATCAGAAACTGGTTCCATCATTTTATACCTCAGGGACGTCGAGAAGCTTTTTCTCCAATCACGGCGGATATACAATTTGTTCAACAAAATGTTGAAGAGACTTTCAGGGTCAGTGTTGATACTTGGTTCCCGAATGGTAGACGCTGAAGATGATTGCAAAGAAGTCGACGAGAAGCTTGCTGTTTTGTTCCCCTACAATATTGAGATCAGACCCCCAGAAGACGAGACTCATCTTGTCAGCTGGAAGTCTCAACTGGAAGAAGACATGAAGATGATCCAATTTCAAGATAACAAAAATCACATAGCCGAGGTGCTTGCGGCGAATGATCTTGAATGTGACGATCTTGGTTCAATCTGCCATGCAGACACAATGGTACTCAGCAACTACATAGAAGAGATTGTGATTTCGGCGCTATCTTATCATTTGATGCAAAACAAGGATCCAGAATATCGAAATGGAAAGCTTGTTATATCGTCGAGGAGTTTGTCCCATGGATTGAGTATATTCCAGGAGGGAAAATCTTCTCTGAAACTGGAGACCAATGCCGATTCCAATAAGAAAACCGAAGGGGAAGAGGCTGTTGGTGCAAAGACTGAATCGAAGTCTGAAACTGCAGCACCGGAAAACAAAGGTGAAGCAGAGAAATCTGGTCCTGCGGTGAAGAAGGACAGTGAGAATCCACCTCCGCCAAAAGTAGAAGTGGCACCTGACAATGAATTTGAGAAGCGCATAAGGCCGGAGGTTATCCCTGCAAATGAGATTGGAGTCACATTTGCAGATATTGGTGCATTGGATGATATCAAAGAATCACTTCAGGAATTGGTCATGCTCCCGCTTCGAAGACCAGACCTTTTCAAAGGTGGGCTTCTGAAGCCTTGCAGAGGCATATTGCTTTTCGGTCCTCCTGGCACTGGAAAAACAATGCTGGCAAAGGCCATAGCAAGTGAAGCAGGAGCAAGTTTCATCAACGTGTCTATGTCCACGATCACCTCAAAATGGTTTGGAGAAGATGAGAAGAACGTTCGAGCTCTGTTCACACTTGCAGCAAAGGTCTCCCCAACTATCATCTTCGTGGATGAGGTTGACAGCATGCTTGGGCAGCGAACCAGAGTTGGGGAGCATGAGGCCATGAGGAAGATTAAGAACGAGTTCATGACACACTGGGATGGACTTTTGACAAAGACAGGGGAGAGGATTCTTGTTCTTGCCGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATCAGGCGATTTGAGCGGAGAGTCATGGTTGGCCTTCCCTCAGTCGAGAACAGGGAAATGATCTTGAGAACTCTTCTTTCGAAAGAAAAGGTCGAAAATCTGGACTTTAAGGAGCTTGCAACCATAACAGAAGGATACAGTGGAAGTGATCTTAAGAACTTGTGCGTGACAGCAGCCTATCGACCGGTTAGGGAGCTTTTAAAACAGGAGAGACAAAAGGATATGGAAAAGAAGAAGAAAGATGCAGAAGAAAAGAGCACTGAAGAAGCTTCAGAACCAAAAGAAGAAGAGAAAGAGGAGGGCGTAATTACCCTGAGGCCTTTAAACATGGAAGATATGAGGCAGGCAAAGAATCAGGTTGCTGCAAGTTTCGCATCAGAAGGATCGGTAATGAGCGAGCTGAAACAGTGGAACGAACTGTATGGCGAGGGTGGCTCGAGGAAGAAGCAACAACTGACTTATTTCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

831

Amino Acids

92.7

Weight (kDa)

5.93

Isoelectric Point (pI)

49.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	369 - 429	3.1e-35	Domain of unknown function (DUF7751)
AAA	PF00004	555 - 685	4.6e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	708 - 751	7.7e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28000 AT4G28000 AT4G28000 AT5G52882
fragaria_vesca	FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620 FvH4_7g30620
malus_domestica	MD01G1211300.v1.1 MD07G1282000.v1.1
prunus_persica	Prupe.2G303900_v2.0.a1 Prupe.2G303900_v2.0.a1
pyrus_communis	pycom01g22180 pycom07g25590
rosa_chinensis	RchiOBHm_Chr1g0379521
rosa_laevigata	RLG00000026395
rosa_multiflora	Rmu_sc0006761.1_g000024
rosa_roxburghii	Rroxscaffold_4G00280110
rosa_rugosa	Rorug01G0412600 Rorug01G0412700 Rorug01G0412800.1 Rorug01G0412900
rosa_samantha	Rh1AG435400 Rh1BG392800 Rh1CG405400 Rh1DG423600
rosa_wichuraiana	Rw1G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	151, 313
AatII	GACGTC	1 cut(s)	816
Acc36I	ACCTGC	3 cut(s)	151, 313, 343
AccB1I	GGYRCC	1 cut(s)	1480
AccBSI	CCGCTC	1 cut(s)	2038
AccI	GTMKAC	2 cut(s)	915, 942
AccII	CGCG	2 cut(s)	546, 711
AclI	AACGTT	1 cut(s)	1797
AclWI	GGATC	4 cut(s)	1045, 1211, 1224, 2413
AcsI	RAATTY	1 cut(s)	1493
AcuI	CTGAAG	6 cut(s)	284, 942, 1574, 1667, 2277, 2304
AcyI	GRCGYC	1 cut(s)	813
AfaI	GTAC	3 cut(s)	562, 758, 1152
AfiI	CCNNNNNNNGG	5 cut(s)	545, 1658, 1688, 1773, 1890
AflII	CTTAAG	1 cut(s)	2174
AflIII	ACRYGT	1 cut(s)	1746
AgeI	ACCGGT	1 cut(s)	2206
AgsI	TTSAA	7 cut(s)	632, 859, 871, 1061, 1109, 1128, 1633
AjnI	CCWGG	2 cut(s)	1284, 1681
AjuI	GAANNNNNNNTTGG	2 cut(s)	1341, 1373
Alw21I	GWGCWC	2 cut(s)	1807, 2282
Alw26I	GTCTC	7 cut(s)	171, 868, 995, 1029, 1307, 1834, 2227
AlwI	GGATC	4 cut(s)	1045, 1211, 1224, 2413
AlwNI	CAGNNNCTG	3 cut(s)	335, 754, 785
Ama87I	CYCGRG	1 cut(s)	2458
AoxI	GGCC	7 cut(s)	614, 1511, 1710, 1902, 1997, 2053, 2339
ApeKI	GCWGC	7 cut(s)	248, 397, 1391, 1820, 1876, 2195, 2384
ApoI	RAATTY	1 cut(s)	1493
ArsI	GACNNNNNNTTYG	2 cut(s)	1478, 1510
AsiGI	ACCGGT	1 cut(s)	2206
Asp700I	GAANNNNTTC	3 cut(s)	1297, 1587, 1925
AspLEI	GCGC	4 cut(s)	376, 711, 1189, 1506
AspS9I	GGNCC	5 cut(s)	332, 477, 614, 1427, 1676
AsuC2I	CCSGG	2 cut(s)	76, 292
AsuHPI	GGTGA	5 cut(s)	136, 294, 1421, 1447, 1756
AsuII	TTCGAA	2 cut(s)	1615, 2102
AvaI	CYCGRG	1 cut(s)	2458
AvaII	GGWCC	4 cut(s)	332, 477, 1427, 1676
AxyI	CCTNAGG	2 cut(s)	806, 2336
BamHI	GGATCC	1 cut(s)	1216
BanI	GGYRCC	1 cut(s)	1480
BanII	GRGCYC	1 cut(s)	1807
BbsI	GAAGAC	3 cut(s)	1002, 1044, 1624
Bbv12I	GWGCWC	2 cut(s)	1807, 2282
BbvI	GCAGC	7 cut(s)	235, 384, 1403, 1832, 1888, 2207, 2371
BccI	CCATC	4 cut(s)	164, 488, 800, 1937
BceAI	ACGGC	4 cut(s)	118, 144, 460, 854
BcgI	CGANNNNNNTGC	8 cut(s)	379, 413, 922, 935, 956, 969, 1073, 1107
BciT130I	CCWGG	2 cut(s)	1286, 1683
BciVI	GTATCC	1 cut(s)	2150
BcnI	CCSGG	2 cut(s)	76, 292
BcoDI	GTCTC	7 cut(s)	171, 868, 995, 1029, 1307, 1834, 2227
BfmI	CTRYAG	3 cut(s)	336, 746, 1389
BfoI	RGCGCY	1 cut(s)	1190
BfrI	CTTAAG	1 cut(s)	2174
BfuAI	ACCTGC	3 cut(s)	151, 313, 343
BfuI	GTATCC	1 cut(s)	2150
BisI	GCNGC	9 cut(s)	249, 398, 1095, 1392, 1821, 1877, 1986, 2196, 2385
BlsI	GCNGC	9 cut(s)	250, 399, 1096, 1393, 1822, 1878, 1987, 2197, 2386
Bme1390I	CCNGG	4 cut(s)	76, 292, 1286, 1683
Bme18I	GGWCC	4 cut(s)	332, 477, 1427, 1676
BmeT110I	CYCGRG	1 cut(s)	2458
BmgT120I	GGNCC	5 cut(s)	332, 477, 614, 1427, 1676
BmiI	GGNNCC	5 cut(s)	523, 790, 904, 1218, 1482
BmrFI	CCNGG	4 cut(s)	76, 292, 1286, 1683
BmrI	ACTGGG	1 cut(s)	1948
BmsI	GCATC	4 cut(s)	659, 1194, 2254, 2405
BmuI	ACTGGG	1 cut(s)	1948
BpiI	GAAGAC	3 cut(s)	1002, 1044, 1624
BplI	GAGNNNNNCTC	2 cut(s)	2441, 2473
BpmI	CTGGAG	1 cut(s)	1331
Bpu14I	TTCGAA	2 cut(s)	1615, 2102
BpuEI	CTTGAG	1 cut(s)	2107
BpuMI	CCSGG	2 cut(s)	76, 292
BsaHI	GRCGYC	1 cut(s)	813
BsaI	GGTCTC	2 cut(s)	1307, 1834
BsaJI	CCNNGG	3 cut(s)	363, 1083, 1267
BsaWI	WCCGGW	2 cut(s)	1396, 2206
BsaXI	ACNNNNNCTCC	2 cut(s)	491, 521
Bsc4I	CCNNNNNNNGG	5 cut(s)	545, 1658, 1688, 1773, 1890
Bse118I	RCCGGY	1 cut(s)	2206
Bse1I	ACTGG	7 cut(s)	625, 725, 790, 1035, 1314, 1693, 1943
Bse21I	CCTNAGG	2 cut(s)	806, 2336
BseBI	CCWGG	2 cut(s)	1286, 1683
BseDI	CCNNGG	3 cut(s)	363, 1083, 1267
BseGI	GGATG	5 cut(s)	124, 237, 1576, 1858, 1948
BseLI	CCNNNNNNNGG	5 cut(s)	545, 1658, 1688, 1773, 1890
BseMII	CTCAG	7 cut(s)	23, 342, 498, 820, 1168, 2076, 2327
BseNI	ACTGG	7 cut(s)	625, 725, 790, 1035, 1314, 1693, 1943
BseRI	GAGGAG	3 cut(s)	212, 1270, 2333
BseXI	GCAGC	7 cut(s)	235, 384, 1403, 1832, 1888, 2207, 2371
BseYI	CCCAGC	1 cut(s)	61
Bsh1236I	CGCG	2 cut(s)	546, 711
Bsh1285I	CGRYCG	1 cut(s)	2207
BshFI	GGCC	7 cut(s)	616, 1513, 1712, 1904, 1999, 2055, 2341
BshNI	GGYRCC	1 cut(s)	1480
BshTI	ACCGGT	1 cut(s)	2206
BsiEI	CGRYCG	1 cut(s)	2207
BsiHKAI	GWGCWC	2 cut(s)	1807, 2282
BsiHKCI	CYCGRG	1 cut(s)	2458
BsiSI	CCGG	5 cut(s)	75, 292, 1397, 1514, 2207
BslFI	GGGAC	3 cut(s)	563, 824, 1249
BslI	CCNNNNNNNGG	5 cut(s)	545, 1658, 1688, 1773, 1890
BsmAI	GTCTC	7 cut(s)	171, 868, 995, 1029, 1307, 1834, 2227
BsmFI	GGGAC	3 cut(s)	563, 824, 1249
BsnI	GGCC	7 cut(s)	616, 1513, 1712, 1904, 1999, 2055, 2341
Bso31I	GGTCTC	2 cut(s)	1307, 1834
BsoBI	CYCGRG	1 cut(s)	2458
Bsp119I	TTCGAA	2 cut(s)	1615, 2102
Bsp1286I	GDGCHC	2 cut(s)	1807, 2282
Bsp1407I	TGTACA	1 cut(s)	756
Bsp19I	CCATGG	1 cut(s)	1267
BspANI	GGCC	7 cut(s)	616, 1513, 1712, 1904, 1999, 2055, 2341
BspCNI	CTCAG	7 cut(s)	24, 341, 497, 819, 1167, 2075, 2328
BspFNI	CGCG	2 cut(s)	546, 711
BspHI	TCATGA	1 cut(s)	1929
BspLI	GGNNCC	5 cut(s)	523, 790, 904, 1218, 1482
BspMAI	CTGCAG	3 cut(s)	340, 750, 1393
BspMI	ACCTGC	3 cut(s)	151, 313, 343
BspPI	GGATC	4 cut(s)	1045, 1211, 1224, 2413
BspT104I	TTCGAA	2 cut(s)	1615, 2102
BspT107I	GGYRCC	1 cut(s)	1480
BspTI	CTTAAG	1 cut(s)	2174
BspTNI	GGTCTC	2 cut(s)	1307, 1834
BsrBI	CCGCTC	1 cut(s)	2038
BsrFI	RCCGGY	1 cut(s)	2206
BsrGI	TGTACA	1 cut(s)	756
BsrI	ACTGG	7 cut(s)	625, 725, 790, 1035, 1314, 1693, 1943
BssAI	RCCGGY	1 cut(s)	2206
BssECI	CCNNGG	3 cut(s)	363, 1083, 1267
BssNI	GRCGYC	1 cut(s)	813
BssT1I	CCWWGG	2 cut(s)	363, 1267
Bst2UI	CCWGG	2 cut(s)	1286, 1683
Bst4CI	ACNGT	5 cut(s)	756, 1448, 2162, 2430, 2442
Bst6I	CTCTTC	6 cut(s)	649, 866, 1164, 1344, 2100, 2304
BstACI	GRCGYC	1 cut(s)	813
BstAFI	CTTAAG	1 cut(s)	2174
BstAPI	GCANNNNNTGC	1 cut(s)	19
BstAUI	TGTACA	1 cut(s)	756
BstBI	TTCGAA	2 cut(s)	1615, 2102
BstC8I	GCNNGC	9 cut(s)	81, 360, 954, 1092, 1704, 1868, 2139, 2367, 2420
BstDEI	CTNAG	8 cut(s)	32, 215, 328, 484, 806, 1154, 2062, 2336
BstDSI	CCRYGG	1 cut(s)	1267
BstENI	CCTNNNNNAGG	1 cut(s)	1656
BstF5I	GGATG	5 cut(s)	124, 237, 1576, 1858, 1948
BstFNI	CGCG	2 cut(s)	546, 711
BstH2I	RGCGCY	1 cut(s)	1190
BstHHI	GCGC	4 cut(s)	376, 711, 1189, 1506
BstMAI	GTCTC	7 cut(s)	171, 868, 995, 1029, 1307, 1834, 2227
BstMCI	CGRYCG	1 cut(s)	2207
BstNI	CCWGG	2 cut(s)	1286, 1683
BstNSI	RCATGY	1 cut(s)	1870
BstSCI	CCNGG	4 cut(s)	74, 290, 1284, 1681
BstSFI	CTRYAG	3 cut(s)	336, 746, 1389
BstUI	CGCG	2 cut(s)	546, 711
BstV1I	GCAGC	7 cut(s)	235, 384, 1403, 1832, 1888, 2207, 2371
BstV2I	GAAGAC	3 cut(s)	1002, 1044, 1624
BstX2I	RGATCY	1 cut(s)	1216
BstYI	RGATCY	1 cut(s)	1216
Bsu36I	CCTNAGG	2 cut(s)	806, 2336
BsuI	GTATCC	1 cut(s)	2150
BsuRI	GGCC	7 cut(s)	616, 1513, 1712, 1904, 1999, 2055, 2341
BtgI	CCRYGG	1 cut(s)	1267
BtsCI	GGATG	5 cut(s)	124, 237, 1576, 1858, 1948
BtsIMutI	CAGTG	8 cut(s)	752, 894, 1453, 1686, 1936, 2167, 2280, 2435
BveI	ACCTGC	3 cut(s)	151, 313, 343
Cac8I	GCNNGC	9 cut(s)	81, 360, 954, 1092, 1704, 1868, 2139, 2367, 2420
CaiI	CAGNNNCTG	3 cut(s)	335, 754, 785
CciI	TCATGA	1 cut(s)	1929
CfoI	GCGC	4 cut(s)	376, 711, 1189, 1506
Cfr10I	RCCGGY	1 cut(s)	2206
Cfr13I	GGNCC	5 cut(s)	332, 477, 614, 1427, 1676
CseI	GACGC	1 cut(s)	926
Csp6I	GTAC	3 cut(s)	561, 757, 1151
CspAI	ACCGGT	1 cut(s)	2206
CviQI	GTAC	3 cut(s)	561, 757, 1151
DdeI	CTNAG	8 cut(s)	32, 215, 328, 484, 806, 1154, 2062, 2336
DraI	TTTAAA	2 cut(s)	2223, 2346
Eam1104I	CTCTTC	6 cut(s)	649, 866, 1164, 1344, 2100, 2304
EarI	CTCTTC	6 cut(s)	649, 866, 1164, 1344, 2100, 2304
EciI	GGCGGA	4 cut(s)	131, 146, 856, 1452
Ecl136II	GAGCTC	1 cut(s)	1805
Eco130I	CCWWGG	2 cut(s)	363, 1267
Eco147I	AGGCCT	1 cut(s)	2341
Eco24I	GRGCYC	1 cut(s)	1807
Eco31I	GGTCTC	2 cut(s)	1307, 1834
Eco32I	GATATC	2 cut(s)	777, 1576
Eco47I	GGWCC	4 cut(s)	332, 477, 1427, 1676
Eco53kI	GAGCTC	1 cut(s)	1805
Eco57I	CTGAAG	6 cut(s)	284, 942, 1574, 1667, 2277, 2304
Eco81I	CCTNAGG	2 cut(s)	806, 2336
Eco88I	CYCGRG	1 cut(s)	2458
EcoICRI	GAGCTC	1 cut(s)	1805
EcoNI	CCTNNNNNAGG	1 cut(s)	1656
EcoO109I	RGGNCCY	1 cut(s)	332
EcoRII	CCWGG	2 cut(s)	1284, 1681
EcoRV	GATATC	2 cut(s)	777, 1576
EcoT14I	CCWWGG	2 cut(s)	363, 1267
EcoT38I	GRGCYC	1 cut(s)	1807
ErhI	CCWWGG	2 cut(s)	363, 1267
FalI	AAGNNNNNCTT	6 cut(s)	568, 600, 1572, 1604, 1626, 1658
FaqI	GGGAC	3 cut(s)	563, 824, 1249
FauI	CCCGC	2 cut(s)	539, 1617
FauNDI	CATATG	1 cut(s)	253
FblI	GTMKAC	2 cut(s)	915, 942
Fnu4HI	GCNGC	9 cut(s)	249, 398, 1095, 1392, 1821, 1877, 1986, 2196, 2385
FokI	GGATG	5 cut(s)	131, 244, 1583, 1865, 1955
FriOI	GRGCYC	1 cut(s)	1807
Fsp4HI	GCNGC	9 cut(s)	249, 398, 1095, 1392, 1821, 1877, 1986, 2196, 2385
GlaI	GCGC	4 cut(s)	375, 710, 1188, 1505
GluI	GCNGC	9 cut(s)	249, 398, 1095, 1392, 1821, 1877, 1986, 2196, 2385
GsaI	CCCAGC	1 cut(s)	65
GsuI	CTGGAG	1 cut(s)	1331
HaeII	RGCGCY	1 cut(s)	1190
HaeIII	GGCC	7 cut(s)	616, 1513, 1712, 1904, 1999, 2055, 2341
HapII	CCGG	5 cut(s)	75, 292, 1397, 1514, 2207
HgaI	GACGC	1 cut(s)	926
HhaI	GCGC	4 cut(s)	376, 711, 1189, 1506
Hin1I	GRCGYC	1 cut(s)	813
Hin6I	GCGC	4 cut(s)	374, 709, 1187, 1504
HinP1I	GCGC	4 cut(s)	374, 709, 1187, 1504
HincII	GTYRAC	3 cut(s)	240, 943, 1861
HindII	GTYRAC	3 cut(s)	240, 943, 1861
HindIII	AAGCTT	4 cut(s)	821, 950, 1238, 2289
HpaI	GTTAAC	1 cut(s)	240
HpaII	CCGG	5 cut(s)	75, 292, 1397, 1514, 2207
HphI	GGTGA	5 cut(s)	136, 294, 1421, 1447, 1756
Hpy166II	GTNNAC	7 cut(s)	100, 240, 916, 943, 1758, 1812, 1861
Hpy8I	GTNNAC	7 cut(s)	100, 240, 916, 943, 1758, 1812, 1861
Hpy99I	CGWCG	3 cut(s)	818, 947, 1255
HpyAV	CCTTC	8 cut(s)	535, 549, 605, 1337, 1435, 2066, 2147, 2396
HpyCH4III	ACNGT	5 cut(s)	756, 1448, 2162, 2430, 2442
HpyCH4IV	ACGT	5 cut(s)	494, 563, 813, 1746, 1797
HpyF3I	CTNAG	8 cut(s)	32, 215, 328, 484, 806, 1154, 2062, 2336
HpySE526I	ACGT	5 cut(s)	494, 563, 813, 1746, 1797
Hsp92I	GRCGYC	1 cut(s)	813
HspAI	GCGC	4 cut(s)	374, 709, 1187, 1504
KspAI	GTTAAC	1 cut(s)	240
LmnI	GCTCC	9 cut(s)	133, 499, 540, 703, 1611, 1730, 1894, 2134, 2215
Lsp1109I	GCAGC	7 cut(s)	235, 384, 1403, 1832, 1888, 2207, 2371
LweI	GCATC	4 cut(s)	659, 1194, 2254, 2405
MaeII	ACGT	5 cut(s)	494, 563, 813, 1746, 1797
MaeIII	GTNAC	7 cut(s)	124, 187, 490, 750, 1112, 1543, 2188
MbiI	CCGCTC	1 cut(s)	2038
MfeI	CAATTG	1 cut(s)	106
MflI	RGATCY	1 cut(s)	1216
MhlI	GDGCHC	2 cut(s)	1807, 2282
MluCI	AATT	7 cut(s)	106, 511, 850, 1055, 1493, 1595, 2328
MlyI	GAGTC	4 cut(s)	395, 997, 1551, 2052
MmeI	TCCRAC	3 cut(s)	297, 384, 477
MroXI	GAANNNNTTC	3 cut(s)	1297, 1587, 1925
MseI	TTAA	6 cut(s)	239, 1917, 2130, 2175, 2222, 2345
MslI	CAYNNNNRTG	4 cut(s)	1046, 1745, 1847, 1941
MspA1I	CMGCKG	1 cut(s)	1017
MspCI	CTTAAG	1 cut(s)	2174
MspI	CCGG	5 cut(s)	75, 292, 1397, 1514, 2207
MspR9I	CCNGG	4 cut(s)	76, 292, 1286, 1683
MunI	CAATTG	1 cut(s)	106
MvaI	CCWGG	2 cut(s)	1286, 1683
MvnI	CGCG	2 cut(s)	546, 711
NciI	CCSGG	2 cut(s)	76, 292
NcoI	CCATGG	1 cut(s)	1267
NdeI	CATATG	1 cut(s)	253
NlaIV	GGNNCC	5 cut(s)	523, 790, 904, 1218, 1482
NmeAIII	GCCGAG	2 cut(s)	92, 1108
NmuCI	GTSAC	5 cut(s)	124, 750, 1112, 1543, 2188
NspI	RCATGY	1 cut(s)	1870
NspV	TTCGAA	2 cut(s)	1615, 2102
PaeI	GCATGC	1 cut(s)	1870
PaeR7I	CTCGAG	1 cut(s)	2458
PagI	TCATGA	1 cut(s)	1929
PaqCI	CACCTGC	2 cut(s)	151, 313
PceI	AGGCCT	1 cut(s)	2341
PdmI	GAANNNNTTC	3 cut(s)	1297, 1587, 1925
PfeI	GAWTC	8 cut(s)	295, 461, 1325, 1373, 1453, 1583, 1972, 2374
PfoI	TCCNGGA	1 cut(s)	1284
PinAI	ACCGGT	1 cut(s)	2206
PkrI	GCNGC	9 cut(s)	250, 399, 1096, 1393, 1822, 1878, 1987, 2197, 2386
PleI	GAGTC	4 cut(s)	394, 997, 1550, 2051
PpsI	GAGTC	4 cut(s)	394, 997, 1550, 2051
PpuMI	RGGWCCY	1 cut(s)	332
Psp124BI	GAGCTC	1 cut(s)	1807
Psp1406I	AACGTT	1 cut(s)	1797
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	2 cut(s)	1284, 1681
PspFI	CCCAGC	1 cut(s)	61
PspGI	CCWGG	2 cut(s)	1284, 1681
PspN4I	GGNNCC	5 cut(s)	523, 790, 904, 1218, 1482
PspPI	GGNCC	5 cut(s)	332, 477, 614, 1427, 1676
PspPPI	RGGWCCY	1 cut(s)	332
PspXI	VCTCGAGB	1 cut(s)	2458
PsrI	GAACNNNNNNTAC	2 cut(s)	655, 687
PstI	CTGCAG	3 cut(s)	340, 750, 1393
PstNI	CAGNNNCTG	3 cut(s)	335, 754, 785
PsuI	RGATCY	1 cut(s)	1216
PvuII	CAGCTG	1 cut(s)	1017
RsaI	GTAC	3 cut(s)	562, 758, 1152
RsaNI	GTAC	3 cut(s)	561, 757, 1151
RseI	CAYNNNNRTG	4 cut(s)	1046, 1745, 1847, 1941
SacI	GAGCTC	1 cut(s)	1807
SalI	GTCGAC	1 cut(s)	941
SaqAI	TTAA	6 cut(s)	239, 1917, 2130, 2175, 2222, 2345
SatI	GCNGC	9 cut(s)	249, 398, 1095, 1392, 1821, 1877, 1986, 2196, 2385
Sau96I	GGNCC	5 cut(s)	332, 477, 614, 1427, 1676
SchI	GAGTC	4 cut(s)	395, 997, 1551, 2052
ScrFI	CCNGG	4 cut(s)	76, 292, 1286, 1683
SduI	GDGCHC	2 cut(s)	1807, 2282
SfaNI	GCATC	4 cut(s)	659, 1194, 2254, 2405
SfcI	CTRYAG	3 cut(s)	336, 746, 1389
Sfr274I	CTCGAG	1 cut(s)	2458
SfuI	TTCGAA	2 cut(s)	1615, 2102
SinI	GGWCC	4 cut(s)	332, 477, 1427, 1676
SlaI	CTCGAG	1 cut(s)	2458
SmiMI	CAYNNNNRTG	4 cut(s)	1046, 1745, 1847, 1941
SmlI	CTYRAG	3 cut(s)	2086, 2174, 2458
SmoI	CTYRAG	3 cut(s)	2086, 2174, 2458
SphI	GCATGC	1 cut(s)	1870
Sse9I	AATT	7 cut(s)	106, 511, 850, 1055, 1493, 1595, 2328
SseBI	AGGCCT	1 cut(s)	2341
SspI	AATATT	1 cut(s)	976
SstI	GAGCTC	1 cut(s)	1807
StuI	AGGCCT	1 cut(s)	2341
StyD4I	CCNGG	4 cut(s)	74, 290, 1284, 1681
StyI	CCWWGG	2 cut(s)	363, 1267
TaaI	ACNGT	5 cut(s)	756, 1448, 2162, 2430, 2442
TaiI	ACGT	5 cut(s)	497, 566, 816, 1749, 1800
TaqII	GACCGA	1 cut(s)	1664
TasI	AATT	7 cut(s)	106, 511, 850, 1055, 1493, 1595, 2328
TatI	WGTACW	1 cut(s)	756
TauI	GCSGC	2 cut(s)	1097, 1988
TfiI	GAWTC	8 cut(s)	295, 461, 1325, 1373, 1453, 1583, 1972, 2374
Tru1I	TTAA	6 cut(s)	239, 1917, 2130, 2175, 2222, 2345
Tru9I	TTAA	6 cut(s)	239, 1917, 2130, 2175, 2222, 2345
TscAI	CASTG	8 cut(s)	759, 894, 1453, 1693, 1943, 2167, 2287, 2435
TseFI	GTSAC	5 cut(s)	124, 750, 1112, 1543, 2188
TseI	GCWGC	7 cut(s)	248, 397, 1391, 1820, 1876, 2195, 2384
Tsp45I	GTSAC	5 cut(s)	124, 750, 1112, 1543, 2188
TspDTI	ATGAA	7 cut(s)	248, 1058, 1506, 1729, 1918, 2028, 2476
TspRI	CASTG	8 cut(s)	759, 894, 1453, 1693, 1943, 2167, 2287, 2435
Vha464I	CTTAAG	1 cut(s)	2174
VpaK11BI	GGWCC	4 cut(s)	332, 477, 1427, 1676
XagI	CCTNNNNNAGG	1 cut(s)	1656
XapI	RAATTY	1 cut(s)	1493
XceI	RCATGY	1 cut(s)	1870
XhoI	CTCGAG	1 cut(s)	2458
XmiI	GTMKAC	2 cut(s)	915, 942
XmnI	GAANNNNTTC	3 cut(s)	1297, 1587, 1925
ZraI	GACGTC	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.