AT5G54280
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005645
Physical Location & Seq
Reverse (-)
22039383 .. 22046358
6976 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G54280.2

Sequence Viewer

Length: 3093 bp
ATGTTGTCCACTGCAAATGTTGTGAAAGTGTCTACTGAAGAGCTTTTTCCTGCAAACCCAGATATATTGGAAGGTGTTGAAGATCTTATACAGCTCAGTTATCTAAATGAACCATCTGTTCTTTATAACCTTCGTGTCAGATATTTGCAAGACGTGATTTATAGTAAAGCAGGACCTGTATTGATTGCGGTCAATCCATTCAAGAATGTAGAAATTTATGGAAATGATGTTATCTCAGCTTATCAGAAGAAGGTTATGGATGCTCCACATGTCTATGCTGTGGCGGATGCAGCTTATGATGAGATGATGAGAGAGAAGAATCAGTCTCTTATAATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACTGCAAAATTTGCAATGCAGTACTTGGCAGCTCTCGGTGGAGGTAGCTGTGGAGTAGAGTATGAAATCCTAAAAACAACCTGCATACTCGAAGCTTTTGGAAACGCTAAAACATCAAGAAATGCTAACTCTAGCCGATTTGGTAAACTCATAGAAATTCATTTTAGTGCAATGGGAAAGATATGTGGAGCCAAACTTGAAACTTTTCTGCTAGAGAAGTCAAGAGTGGTTCAGCTGTTCAATGGCGAAAGATCCTATCATATATTTTATGAGCTGTGTGCAGGTGCTTCACCGATTCTTAAAGAGAGATTGAAGCTTAAAACAGCAAGTGAGTATACCTACCTGAGCCAGAGTGATTGCTTGACCATTGCCGGTGTTGATGATGCTCAGAAATTTCACAAACTACTGGAAGCTTTTGACATTGTTCAAATCCCTAAAGAGCATCAAGAGAGGGCATTTGCATTGCTTGCAGCAGTGTTGTGGCTAGGAAATGTATCTTTTCGAGTTACTGACAACGAAAATCATGTGGAGGTGGTAGCGGATGAAGCTGTCGCCAATGCCGCTATGTTAATGGGCTGCAACACAGAAGAGCTTATGGTGGTTTTGTCCACCCGTAAACTTCAAGCTGGTACGGATTGTATTGCTAAAAAACTGACATTGCGGCAGGCAACTGACATGAGGGATGGAATAGCAAAATTTATTTATGCAAACCTATTTGACTGGCTTGTTGAGCAAATAAACATTGCATTGGAAGTCGGTAAATCACGTACAGGAAGATCTATAAGCATCCTTGATATATATGGGTTTGAATCATTTAAGAATAACAGCTTTGAACAATTCTGTATAAACTACGCAAATGAAAGATTGCAGCAACACTTCAACCGGCATTTATTTAAACTTGAACAAGAGGAATATGAAGAAGATGGAATTGATTGGACTAAGGTCGAATTTGTAGACAATCAAGAGTGCTTAGATCTAATTGAGAAGAAACCAATTGGTTTGTTGTCTCTACTAGACGAGGAATCAAATTTTCCAAAAGCAACTGATTTGACCTTTGCCAACAAGCTCAAGCAACATTTGAAGACCAACTCTTGCTTCAAAGGAGAGAGAGGTCGAGCCTTCAGAGTTAATCATTATGCTGGAGAGGTTCTCTATGATACAAATGGCTTTTTGGAGAAGAACAGGGATCCGTTACCTGCTGATCTTATCAATCTTTTATCATCATGCGACTGCCAGTTGCTGAAATTGTTTTCAACTAAAATGCGTGGCAAATCGCAAAAGCCACTTATGTTATCGGACTCCACGAACCAAACTGTTGGAACAAAGTTCAAGGGTCAACTTTTCAAATTGATGAACAAGTTAGAGAACACAAGTCCTCACTTCATTCGATGCATAAAGCCGAATTCAAAGCAGCTTCCCAGAGTTTATGAAGAGGATCTTGTCTTACAACAGCTTAGATGTTGTGGCGTGTTGGAAGTTGTTAGAATATCAAGATCTGGATATCCTACTCGTTTGACACATCAAGAGTTTGCAGGAAGATATGGTTTCTTATTGTCAGACAAAAAGGTCGCTCAGGATCCTCTGAGCGTATCAATTGCTGTTCTGAAACAATATGACGTTCATCCTGAAATGTATCAAGTGGGTTACACAAAATTGTACCTCCGAACTGGACAAATTGGGATCTTTGAGGATCGGAGGAAAAAGGTTCTTCAAGGCATAGTGGGCTTACAAAAGCATTTCCGTGGTCACTTGTCTCGTGCATACTTCCAAAATATGCGGAAAGTAACATTGGTTCTTCAGTCATATATACGAGGTGAAAATGCCCGAAGATTGTTTGACACTGAAGCAAAATTCCATGCGGATTCTGTTTCTGAAGCAAGCACAGATGAGTTGAGTGCAGTCATACACTTGCAATCTGCGGTTCGTGGATGGTTGGCTCGCAAACATTTCAATAGTATGCAAAGACAAAAAGAACTACGCAATGTGGCGACAAAATCAAAGAGGAAAGCTGGCAGGAGGATTTCAGAAGACAAGGATATTCCTCTGGAGCAGCCACAAGTTCAACCAACATCTATGTCTGATCTCCAGAAACGGATTTTGAAATCTGAAGCAGCTTTATCGCAGAAGGAAGAAGAAAACACAGCTTTGAGAGAGCAGTTGAGGCAATTTGAGGAGAGATGGTCAGAGTATGATATAAAGATGAAGTCAATGGAGGAAACATGGCAAAAGCAAATGTCATCATTGCAGATGAGTCTTGCCGCCGCTAGAAAGAGTCTAGCTGCAGAGAGCATTACGGGTCAAGCAGGAGGAAGACAAGACACATCGATATCACCTTTCGGTTATGACTCAGAGGACACGATGTCTACTGGAACTCCGGGAGTAAGAACTCCTACTAATAAGTTCACAAACGGAAACACTCCTGAACTCAGAATCAGAGAGCTCAACGGAAGTTTGAATGCGGTTAATCATCTTGCAAGAGAGTTTGACCAAAGGAGACTCAATTTCGATGAAGATGCAAGAGCTATTGTGGAGGTGAAGCTCGGACCTCAGGCAACTCCAAACGGGCAGCAACAGCAACATCCAGAAGATGAATTTAGGAGACTGAAGCTAAGATTTGAGACATGGAAGAAAGATTACAAAGCTAGATTAAGAGATACTAAAGCAAGACTCCATAGAGTAGATGGTGATAAAGGTCGTCACCGGAAATGGTGGGGAAAAAGAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

1030

Amino Acids

117.25

Weight (kDa)

8.83

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_VIII-1_N PF25369 163 - 207 8.5e-20 Myosin-1-like, N-terminal SH3 domain
Myosin_head PF00063 215 - 867 8.4e-239 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 126, 332
AarI CACCTGC 1 cut(s) 638
AasI GACNNNNNNGTC 1 cut(s) 1931
Acc36I ACCTGC 3 cut(s) 455, 638, 1570
AccI GTMKAC 4 cut(s) 32, 701, 1320, 2729
AclWI GGATC 8 cut(s) 612, 1547, 1560, 1809, 1937, 1950, 2054, 2064
AcuI CTGAAG 7 cut(s) 57, 1471, 2147, 2229, 2259, 2493, 2990
AfaI GTAC 4 cut(s) 389, 997, 1135, 2024
AflIII ACRYGT 1 cut(s) 268
AhdI GACNNNNNGTC 1 cut(s) 2725
AjiI CACGTC 1 cut(s) 154
AjuI GAANNNNNNNTTGG 4 cut(s) 1445, 1477, 2138, 2170
Alw21I GWGCWC 1 cut(s) 2808
Alw26I GTCTC 7 cut(s) 330, 359, 1377, 2124, 2854, 2959, 2978
AlwI GGATC 8 cut(s) 612, 1547, 1560, 1809, 1937, 1950, 2054, 2064
AlwNI CAGNNNCTG 2 cut(s) 176, 1606
Asp700I GAANNNNTTC 1 cut(s) 570
AspS9I GGNCC 2 cut(s) 173, 2909
AsuC2I CCSGG 1 cut(s) 2742
AsuHPI GGTGA 6 cut(s) 648, 2192, 2688, 2911, 3056, 3062
AvaII GGWCC 2 cut(s) 173, 2909
AxyI CCTNAGG 1 cut(s) 2913
BamHI GGATCC 2 cut(s) 1552, 1942
BanII GRGCYC 1 cut(s) 2808
BarI GAAGNNNNNNTAC 4 cut(s) 72, 104, 2984, 3016
BauI CACGAG 1 cut(s) 2121
BbsI GAAGAC 3 cut(s) 1454, 2400, 2683
Bbv12I GWGCWC 1 cut(s) 2808
BccI CCATC 6 cut(s) 121, 1043, 1283, 2289, 2538, 3041
BcgI CGANNNNNNTGC 4 cut(s) 2466, 2500, 2861, 2895
BcnI CCSGG 1 cut(s) 2742
BcoDI GTCTC 7 cut(s) 330, 359, 1377, 2124, 2854, 2959, 2978
BfaI CTAG 8 cut(s) 498, 578, 851, 1379, 2631, 2642, 3009, 3091
BfmI CTRYAG 1 cut(s) 2646
BfuAI ACCTGC 3 cut(s) 455, 638, 1570
BglII AGATCT 4 cut(s) 82, 1142, 1339, 1859
BmcAI AGTACT 1 cut(s) 389
Bme1390I CCNGG 1 cut(s) 2742
Bme18I GGWCC 2 cut(s) 173, 2909
BmeRI GACNNNNNGTC 1 cut(s) 2725
BmgBI CACGTC 1 cut(s) 154
BmgT120I GGNCC 2 cut(s) 173, 2909
BmiI GGNNCC 3 cut(s) 556, 1554, 1944
BmrFI CCNGG 1 cut(s) 2742
BmsI GCATC 7 cut(s) 250, 277, 739, 817, 1161, 1745, 2869
BoxI GACNNNNGTC 1 cut(s) 1307
BpiI GAAGAC 3 cut(s) 1454, 2400, 2683
BplI GAGNNNNNCTC 2 cut(s) 1500, 1532
BpmI CTGGAG 3 cut(s) 1527, 2432, 2435
Bpu10I CCTNAGC 2 cut(s) 710, 1938
BpuEI CTTGAG 1 cut(s) 1418
BpuMI CCSGG 1 cut(s) 2742
Bsa29I ATCGAT 1 cut(s) 2690
BsaAI YACGTR 1 cut(s) 1133
BsaJI CCNNGG 1 cut(s) 2107
BsaWI WCCGGW 1 cut(s) 3066
BsaXI ACNNNNNCTCC 4 cut(s) 2531, 2561, 2722, 2752
Bse118I RCCGGY 2 cut(s) 737, 1248
Bse1I ACTGG 5 cut(s) 777, 1091, 1600, 2038, 2737
Bse21I CCTNAGG 1 cut(s) 2913
Bse3DI GCAATG 8 cut(s) 387, 543, 732, 827, 1022, 1107, 2353, 2606
BseCI ATCGAT 1 cut(s) 2690
BseDI CCNNGG 1 cut(s) 2107
BseGI GGATG 8 cut(s) 265, 292, 913, 1054, 1152, 1987, 2300, 2944
BseMI GCAATG 8 cut(s) 387, 543, 732, 827, 1022, 1107, 2353, 2606
BseNI ACTGG 5 cut(s) 777, 1091, 1600, 2038, 2737
BseRI GAGGAG 1 cut(s) 2552
BseYI CCCAGC 1 cut(s) 353
BsgI GTGCAG 2 cut(s) 666, 2283
BshVI ATCGAT 1 cut(s) 2690
BsiHKAI GWGCWC 1 cut(s) 2808
BsiSI CCGG 4 cut(s) 738, 1249, 2741, 3067
BsmAI GTCTC 7 cut(s) 330, 359, 1377, 2124, 2854, 2959, 2978
BsmI GAATGC 1 cut(s) 2827
Bsp1286I GDGCHC 1 cut(s) 2808
BspDI ATCGAT 1 cut(s) 2690
BspLI GGNNCC 3 cut(s) 556, 1554, 1944
BspMAI CTGCAG 1 cut(s) 2650
BspMI ACCTGC 3 cut(s) 455, 638, 1570
BspPI GGATC 8 cut(s) 612, 1547, 1560, 1809, 1937, 1950, 2054, 2064
BspQI GCTCTTC 2 cut(s) 33, 948
BsrDI GCAATG 8 cut(s) 387, 543, 732, 827, 1022, 1107, 2353, 2606
BsrFI RCCGGY 2 cut(s) 737, 1248
BsrI ACTGG 5 cut(s) 777, 1091, 1600, 2038, 2737
BssAI RCCGGY 2 cut(s) 737, 1248
BssECI CCNNGG 1 cut(s) 2107
BssNAI GTATAC 1 cut(s) 702
BssSI CACGAG 1 cut(s) 2121
Bst1107I GTATAC 1 cut(s) 702
Bst2BI CACGAG 1 cut(s) 2121
Bst4CI ACNGT 1 cut(s) 1681
Bst6I CTCTTC 3 cut(s) 33, 948, 1791
BstAPI GCANNNNNTGC 2 cut(s) 377, 833
BstBAI YACGTR 1 cut(s) 1133
BstC8I GCNNGC 5 cut(s) 834, 1032, 2245, 2305, 2377
BstDSI CCRYGG 1 cut(s) 2107
BstF5I GGATG 8 cut(s) 265, 292, 913, 1054, 1152, 1987, 2300, 2944
BstMAI GTCTC 7 cut(s) 330, 359, 1377, 2124, 2854, 2959, 2978
BstMWI GCNNNNNNNGC 9 cut(s) 290, 377, 833, 911, 926, 1096, 2088, 2527, 2938
BstNSI RCATGY 1 cut(s) 272
BstPAI GACNNNNGTC 1 cut(s) 1307
BstSCI CCNGG 1 cut(s) 2740
BstSFI CTRYAG 1 cut(s) 2646
BstV2I GAAGAC 3 cut(s) 1454, 2400, 2683
BstX2I RGATCY 9 cut(s) 82, 617, 1142, 1339, 1552, 1801, 1859, 1942, 2046
BstXI CCANNNNNNTGG 1 cut(s) 1682
BstYI RGATCY 9 cut(s) 82, 617, 1142, 1339, 1552, 1801, 1859, 1942, 2046
BstZ17I GTATAC 1 cut(s) 702
Bsu15I ATCGAT 1 cut(s) 2690
Bsu36I CCTNAGG 1 cut(s) 2913
BsuTUI ATCGAT 1 cut(s) 2690
BtgI CCRYGG 1 cut(s) 2107
BtrI CACGTC 1 cut(s) 154
BtsCI GGATG 8 cut(s) 265, 292, 913, 1054, 1152, 1987, 2300, 2944
BtsI GCAGTG 2 cut(s) 9, 846
BtsIMutI CAGTG 3 cut(s) 9, 846, 2205
BveI ACCTGC 3 cut(s) 455, 638, 1570
Cac8I GCNNGC 5 cut(s) 834, 1032, 2245, 2305, 2377
CaiI CAGNNNCTG 2 cut(s) 176, 1606
Cfr10I RCCGGY 2 cut(s) 737, 1248
Cfr13I GGNCC 2 cut(s) 173, 2909
ClaI ATCGAT 1 cut(s) 2690
Csp6I GTAC 4 cut(s) 388, 996, 1134, 2023
CviAII CATG 7 cut(s) 269, 890, 1042, 1590, 2222, 2586, 2988
CviQI GTAC 4 cut(s) 388, 996, 1134, 2023
DraI TTTAAA 1 cut(s) 1261
DrdI GACNNNNNNGTC 1 cut(s) 1931
DriI GACNNNNNGTC 1 cut(s) 2725
DseDI GACNNNNNNGTC 1 cut(s) 1931
Eam1104I CTCTTC 3 cut(s) 33, 948, 1791
Eam1105I GACNNNNNGTC 1 cut(s) 2725
EarI CTCTTC 3 cut(s) 33, 948, 1791
EciI GGCGGA 1 cut(s) 299
Ecl136II GAGCTC 1 cut(s) 2806
Eco24I GRGCYC 1 cut(s) 2808
Eco32I GATATC 2 cut(s) 1868, 2694
Eco47I GGWCC 2 cut(s) 173, 2909
Eco53kI GAGCTC 1 cut(s) 2806
Eco57I CTGAAG 7 cut(s) 57, 1471, 2147, 2229, 2259, 2493, 2990
Eco81I CCTNAGG 1 cut(s) 2913
EcoICRI GAGCTC 1 cut(s) 2806
EcoO109I RGGNCCY 1 cut(s) 173
EcoRI GAATTC 1 cut(s) 1768
EcoRV GATATC 2 cut(s) 1868, 2694
EcoT22I ATGCAT 1 cut(s) 1760
EcoT38I GRGCYC 1 cut(s) 2808
FaeI CATG 7 cut(s) 272, 893, 1045, 1593, 2225, 2589, 2991
FalI AAGNNNNNCTT 2 cut(s) 1788, 1820
FatI CATG 7 cut(s) 268, 889, 1041, 1589, 2221, 2585, 2987
FblI GTMKAC 4 cut(s) 32, 701, 1320, 2729
FokI GGATG 8 cut(s) 272, 299, 920, 1061, 1139, 1974, 2307, 2931
FriOI GRGCYC 1 cut(s) 2808
FspBI CTAG 8 cut(s) 498, 578, 851, 1379, 2631, 2642, 3009, 3091
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 3 cut(s) 1527, 2432, 2435
HapII CCGG 4 cut(s) 738, 1249, 2741, 3067
Hin1II CATG 7 cut(s) 272, 893, 1045, 1593, 2225, 2589, 2991
HincII GTYRAC 1 cut(s) 1703
HindII GTYRAC 1 cut(s) 1703
HindIII AAGCTT 3 cut(s) 459, 680, 777
HpaII CCGG 4 cut(s) 738, 1249, 2741, 3067
HphI GGTGA 6 cut(s) 648, 2192, 2688, 2911, 3056, 3062
HpyAV CCTTC 5 cut(s) 65, 140, 244, 1495, 2485
HpyCH4III ACNGT 1 cut(s) 1681
HpyCH4IV ACGT 3 cut(s) 153, 1132, 1983
HpyF10VI GCNNNNNNNGC 9 cut(s) 290, 377, 833, 911, 926, 1096, 2088, 2527, 2938
HpySE526I ACGT 3 cut(s) 153, 1132, 1983
Hsp92II CATG 7 cut(s) 272, 893, 1045, 1593, 2225, 2589, 2991
LguI GCTCTTC 2 cut(s) 33, 948
LmnI GCTCC 4 cut(s) 268, 350, 554, 2413
LweI GCATC 7 cut(s) 250, 277, 739, 817, 1161, 1745, 2869
MaeI CTAG 8 cut(s) 498, 578, 851, 1379, 2631, 2642, 3009, 3091
MaeII ACGT 3 cut(s) 153, 1132, 1983
MaeIII GTNAC 6 cut(s) 871, 1557, 2009, 2111, 2149, 3062
MfeI CAATTG 2 cut(s) 1359, 1959
MflI RGATCY 9 cut(s) 82, 617, 1142, 1339, 1552, 1801, 1859, 1942, 2046
MhlI GDGCHC 1 cut(s) 2808
MlyI GAGTC 6 cut(s) 1658, 2626, 2647, 2705, 2856, 3027
MmeI TCCRAC 2 cut(s) 1663, 1818
Mph1103I ATGCAT 1 cut(s) 1760
MroXI GAANNNNTTC 1 cut(s) 570
MseI TTAA 8 cut(s) 666, 684, 935, 1182, 1260, 1494, 2829, 3014
MslI CAYNNNNRTG 3 cut(s) 273, 531, 2106
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 4 cut(s) 738, 1249, 2741, 3067
MspR9I CCNGG 1 cut(s) 2742
MunI CAATTG 2 cut(s) 1359, 1959
Mva1269I GAATGC 1 cut(s) 2827
MwoI GCNNNNNNNGC 9 cut(s) 290, 377, 833, 911, 926, 1096, 2088, 2527, 2938
NciI CCSGG 1 cut(s) 2742
NlaIII CATG 7 cut(s) 272, 893, 1045, 1593, 2225, 2589, 2991
NlaIV GGNNCC 3 cut(s) 556, 1554, 1944
NmuCI GTSAC 2 cut(s) 2111, 3062
NsiI ATGCAT 1 cut(s) 1760
NspI RCATGY 1 cut(s) 272
PaqCI CACCTGC 1 cut(s) 638
PciI ACATGT 1 cut(s) 268
PciSI GCTCTTC 2 cut(s) 33, 948
PcsI WCGNNNNNNNCGW 1 cut(s) 1667
PctI GAATGC 1 cut(s) 2827
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 6 cut(s) 319, 661, 1175, 1388, 2228, 2796
PfoI TCCNGGA 1 cut(s) 2740
PleI GAGTC 6 cut(s) 1658, 2625, 2646, 2705, 2856, 3027
PpsI GAGTC 6 cut(s) 1658, 2625, 2646, 2705, 2856, 3027
Ppu21I YACGTR 1 cut(s) 1133
PpuMI RGGWCCY 1 cut(s) 173
PscI ACATGT 1 cut(s) 268
PshAI GACNNNNGTC 1 cut(s) 1307
PsiI TTATAA 2 cut(s) 126, 332
Psp124BI GAGCTC 1 cut(s) 2808
Psp5II RGGWCCY 1 cut(s) 173
PspFI CCCAGC 1 cut(s) 353
PspN4I GGNNCC 3 cut(s) 556, 1554, 1944
PspPI GGNCC 2 cut(s) 173, 2909
PspPPI RGGWCCY 1 cut(s) 173
PsrI GAACNNNNNNTAC 2 cut(s) 2142, 2174
PstI CTGCAG 1 cut(s) 2650
PstNI CAGNNNCTG 2 cut(s) 176, 1606
PsuI RGATCY 9 cut(s) 82, 617, 1142, 1339, 1552, 1801, 1859, 1942, 2046
PvuII CAGCTG 1 cut(s) 601
RsaI GTAC 4 cut(s) 389, 997, 1135, 2024
RsaNI GTAC 4 cut(s) 388, 996, 1134, 2023
RseI CAYNNNNRTG 3 cut(s) 273, 531, 2106
SacI GAGCTC 1 cut(s) 2808
SapI GCTCTTC 2 cut(s) 33, 948
SaqAI TTAA 8 cut(s) 666, 684, 935, 1182, 1260, 1494, 2829, 3014
Sau96I GGNCC 2 cut(s) 173, 2909
ScaI AGTACT 1 cut(s) 389
SchI GAGTC 6 cut(s) 1658, 2626, 2647, 2705, 2856, 3027
ScrFI CCNGG 1 cut(s) 2742
SduI GDGCHC 1 cut(s) 2808
SfaNI GCATC 7 cut(s) 250, 277, 739, 817, 1161, 1745, 2869
SfcI CTRYAG 1 cut(s) 2646
SinI GGWCC 2 cut(s) 173, 2909
SmiMI CAYNNNNRTG 3 cut(s) 273, 531, 2106
SmlI CTYRAG 1 cut(s) 1433
SmoI CTYRAG 1 cut(s) 1433
SspMI CTAG 8 cut(s) 498, 578, 851, 1379, 2631, 2642, 3009, 3091
SstI GAGCTC 1 cut(s) 2808
StyD4I CCNGG 1 cut(s) 2740
TaaI ACNGT 1 cut(s) 1681
TaiI ACGT 3 cut(s) 156, 1135, 1986
TaqI TCGA 7 cut(s) 456, 868, 1311, 1480, 1753, 2690, 2871
TatI WGTACW 1 cut(s) 387
TauI GCSGC 4 cut(s) 929, 1030, 2627, 2630
TfiI GAWTC 6 cut(s) 319, 661, 1175, 1388, 2228, 2796
Tru1I TTAA 8 cut(s) 666, 684, 935, 1182, 1260, 1494, 2829, 3014
Tru9I TTAA 8 cut(s) 666, 684, 935, 1182, 1260, 1494, 2829, 3014
TscAI CASTG 3 cut(s) 16, 846, 2212
TseFI GTSAC 2 cut(s) 2111, 3062
Tsp45I GTSAC 2 cut(s) 2111, 3062
TspGWI ACGGA 6 cut(s) 1013, 1545, 2096, 2473, 2790, 2826
TspRI CASTG 3 cut(s) 16, 846, 2212
VpaK11BI GGWCC 2 cut(s) 173, 2909
XceI RCATGY 1 cut(s) 272
XcmI CCANNNNNNNNNTGG 1 cut(s) 3044
XmiI GTMKAC 4 cut(s) 32, 701, 1320, 2729
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 8 cut(s) 498, 578, 851, 1379, 2631, 2642, 3009, 3091
ZrmI AGTACT 1 cut(s) 389
Zsp2I ATGCAT 1 cut(s) 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.