Rw5G022610
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0005645
Physical Location & Seq
Forward (+)
31439549 .. 31449771
10223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G022610.1

Sequence Viewer

Length: 3354 bp
ATGATGGTATCGGCGTCGCCGTCGATGGTGGCGAGGAGCTCCTTGGAGGAAATGCTGGATTCGCTGCGGCGGAGGGACGAGGCTGAGAAGCCCAAGGAATTGCCGCCGGCATTGCCGTCCCGGCCCACTTCCAAGGCTCGGCTGCCGTCGGCGCGCCGCTCCTTGCCCAACAACTTCAATGCCGAGACCTTAATCCGGTCGCCGGAGTGGGCCCCCAGTGTGAACAAGAGGAAAGAGAGGGATTCCGGGGTCAAGAGGTGTAATAATTTTTGTGTCAAGAAGACGGAGAAGGACGCGGTGGAGTCGCCGTACGTTGCGTCGGAGGAGGAGCTTCAGAGCCGGCAAAAGGTGGCGAAGTCCGATTGGGGTGACAACGTTGCTTATTTCATCATGAAGAAACTTAAGGTTTGGTGTCGGGGTCCTAGTGGACTATGGGAGTCAGGAACAATACAATCAACGTCCGGGGATGTGGCATTTGTGACACTTTCAAGTGGAAATGTAATCAAAGTGCCCAGGGATGAGCTGCTACCAGCAAACCCAGATGTTCTGGAAGGGGTGGATGATCTTGCACAGCTTAGCTATTTAAATGACCCTTCTGTTCTTTGCAATCTTCAGTCTAGATATTCGCAGGACATGATTTATAGCAAAGCAGGGCCAGTTTTGATTGCAATGAATCCTTTCAAAGATGTCCAAATTTGTGGAGATGATTTTGTCACAGCGTATAGGAAGAAACTTGTGGACAAACCTCATGTTTATGCAATAGCAGACGCTGCTTATAATGAGATGATGAGAGATGATGTAAATCAGTCCATAATCATAAGTGGGGAAAGTGGAGCTGGGAAAACGGAGACAGCAAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGGAGTCGTGGCGTGGAACATGCAATCCTTCAGACCAACTGTATACTGGAGGCATTTGGAAATGCAAAATCATCCAGAAATGATAACGCTAGCCGATTTGGGAAGTTGCTTGAAATTCATTTTAGCTCAGTGGGAAAAATATGTGGTGCTGAAATTCAAACCTTGTTTCTAGAAAAGTCAAGAGTGGCTCGACTGGAAAATGGTGAGAGGTCGTACCATATCTTTTATCAACTTTGTGCTGGTGCTCCATCAATGCTTAAAGAGAGGCTGAATCTGAAAATGGCTAGTGATTACAAGTATCTTAGTCAAAGTGGTTGCTTGGCAATTGATGGTGTAGATGATGCTCAGAAGTTTCACATGCTCATGGAAGCGTTTGCTATTCTTCAAATTTCTGAAGAAGATCAACTACAGGTGTTTTCTGTGCTGGCCGCTGTGTTATGGCTCGGAAACATATCATTTCAAGTAATGGACGATGAAAATCGTGTGGAAGTGTTGGCTGATGAAGCTATAACCACTGCTTCCAGGCTGATGGGATGTAGTGCCCAGGAGTTGATGCTAGCTTTATCCACCCATGACAATGCTGTTGAGGATAGTATTGATAAGAGATTGACGTTGCAGCAGGCCACTGATGCAAGGGATGCATTAGCAAAATTTATCTATGTGAGCTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCTCTTCAGGGAAGATGCTGTACTGGGAGATCCATCAGTATACTTGATATATATGGGTTTGAGTCACTACAGAAGAACAGCTTTGAACAGATGTGTACTAATTATGCAAATGAGAGGCTGCAACAACATTTCAATCGCCATTTATTAAAGCTTGAACAGGAGGAATGTGAATTGGATGGGGTTGATTGGACTAAAGTAGATTTTGAAGACAACCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTTTCGGGCTACTATCCTTGTTGGAAGAGGAATCAAACTGCCCAAAGGCTACTGATTTGACCATTGCTGATATGTTTAAGCAGCACTCGAATGGGAATTCTTGCTTTAAAGCAGAGAGAGGCAGATCTTTCAGTATTCGTCATCATGCTGGAGAGGTTCTATACGACACAAGTGGCTTCTTGGAAAAGAACAGAGATTCTTTGTCCTCTGTTACCATCCAGCTCTTGTCATCATGCAGCAGTCAGCTTCTGCGATTGTTTACCTCCAAAGTGCTTAAGCAAGTCAAGAAACCAGCAGCTACGTCTTGCCAGATGAATGCATTGGACTCTCCAAAACCAAGTGTTGGTATTAAGTTCAAGGCCCAATTATTTAAACTAATGCACCAGTTGGAGAGTAGCACACCTCACTTTGTTCGCTGCATAAAGCCAAATGGCAAGCAGCTTCCCGGTGTGTATGAAGCAGAACTTGTTTTACAACAGCTCAGGTGTTCTGGAGTTTCAGAGGTTGTTAGGATATCACGATCTGGATATCCCACTAGAATGACACATCAAGAATTTGCAGGAAGGTATGGGTTCCTGCTTCCAAAGGCCACTGTTGCTAAGGATCCATTAAGTCTATCTATTGCTGTTCTACAACAGTTCAGTTTCCTCCCTGAAATGTACCAAATAGGCTATACGAAAGTGTATCTTCGAACAGGGCAGATTGCTGCATTGGAGGATAAGAGAAATAAAGTTCTCCGAGGAATAATTGGTGTTCAAAAGTATTTCCGTGGTTACTGGGCTCGCCGTCATTTTCATCAAATTAAGGAAGGAACCACAAAATTACAATCAAATGTTCCTGGTGGAAATGCTGGAAGGAAAGCTGATGCTCTAAAAACTAGACGGAAATCCAGCAGGAAGAGTTCTGAAGTGAAGGACATGCCTTCAGAATTAGAACAACTACGAAGGCGAGTGCTTCAGGCTGAGGCAACTCTGGAGCGAAAGGAAGAGGAAAATGCTGAGTTGCAGGAGCAGCTACAACAGTTTCAGACAAGATGGTCAGATTACGAGGCAAAGATGAAATCAATGCAGGATGTCTGGCAAAAGCAGATGGCGTCTTTGCAAGTGAGTCTTTCTGCAGCCAGAAAGAGTCTTACTTCTGACAATACAGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGATTCGGAAGATGCGCTCTCAATGGGATCTCGAACTCCTGGTGCAAGCACACCTATCAATGGGGTAGCGCGTGAGACAAATGGTACTTTGAATGCTGTCGGAAATTTGGTGAAGGAATTTGATCAACAGAGACAAACTTTTGATGATGAAGTGAAAGCTCTGATTGAGGTAAAACCTGGGCATCCTGATGAAGAACTAAGGAAACTTAAACACCGGTTTGAGTCATGGAAGAAAGAGTACAAGGCAAGATTACGAGAGACAAAGACAAAGCTCCATAAACATGGGCATTCAGAAGAGGAAAAGAGGCGAAAGAAATGGTGGGTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

1117

Amino Acids

125.88

Weight (kDa)

8.56

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_VIII-1_N PF25369 134 - 178 1.1e-16 Myosin-1-like, N-terminal SH3 domain
Myosin_head PF00063 186 - 842 3e-222 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
AasI GACNNNNNNGTC 1 cut(s) 2869
AccB7I CCANNNNNTGG 1 cut(s) 2177
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 2 cut(s) 934, 1630
AccII CGCG 3 cut(s) 154, 296, 3094
AciI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1320
AclI AACGTT 1 cut(s) 375
AclWI GGATC 5 cut(s) 1614, 1824, 2432, 2445, 3058
AcoI YGGCCR 1 cut(s) 1317
AcsI RAATTY 9 cut(s) 693, 1005, 1044, 1278, 1541, 1930, 2387, 3127, 3140
AcuI CTGAAG 8 cut(s) 317, 596, 905, 1305, 1580, 2742, 2760, 2774
AcyI GRCGYC 2 cut(s) 14, 2927
AfaI GTAC 7 cut(s) 311, 1106, 1612, 1687, 2495, 3109, 3263
AfiI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2177, 3083
AflII CTTAAG 2 cut(s) 401, 2108
AgeI ACCGGT 1 cut(s) 3237
AjnI CCWGG 7 cut(s) 512, 1412, 1434, 2671, 2992, 3061, 3199
AloI GAACNNNNNNTCC 2 cut(s) 900, 932
Alw21I GWGCWC 2 cut(s) 41, 1138
Alw26I GTCTC 6 cut(s) 179, 842, 1596, 3092, 3148, 3275
AlwI GGATC 5 cut(s) 1614, 1824, 2432, 2445, 3058
AlwNI CAGNNNCTG 2 cut(s) 770, 2083
AoxI GGCC 7 cut(s) 122, 210, 653, 1317, 1512, 2193, 2421
ApaI GGGCCC 1 cut(s) 214
ApoI RAATTY 9 cut(s) 693, 1005, 1044, 1278, 1541, 1930, 2387, 3127, 3140
AscI GGCGCGCC 1 cut(s) 152
AsiGI ACCGGT 1 cut(s) 3237
Asp700I GAANNNNTTC 2 cut(s) 677, 1835
AspLEI GCGC 4 cut(s) 154, 156, 3040, 3094
AspS9I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2194
AsuC2I CCSGG 4 cut(s) 121, 247, 463, 2280
AsuHPI GGTGA 4 cut(s) 380, 1106, 3006, 3145
AsuII TTCGAA 1 cut(s) 2524
AsuNHI GCTAGC 2 cut(s) 980, 1447
AvaII GGWCC 1 cut(s) 419
BaeGI GKGCMC 3 cut(s) 214, 513, 1435
BamHI GGATCC 1 cut(s) 2437
BanII GRGCYC 3 cut(s) 41, 214, 2617
BarI GAAGNNNNNNTAC 6 cut(s) 1281, 1313, 1594, 1626, 3245, 3277
BbsI GAAGAC 2 cut(s) 287, 1803
Bbv12I GWGCWC 2 cut(s) 41, 1138
BbvCI CCTCAGC 1 cut(s) 2796
BccI CCATC 9 cut(s) 19, 1147, 1214, 1414, 1631, 1760, 2057, 2862, 2917
BceAI ACGGC 5 cut(s) 4, 100, 130, 292, 2604
BciT130I CCWGG 7 cut(s) 514, 1414, 1436, 2673, 2994, 3063, 3201
BclI TGATCA 1 cut(s) 3145
BcnI CCSGG 4 cut(s) 121, 247, 463, 2280
BcoDI GTCTC 6 cut(s) 179, 842, 1596, 3092, 3148, 3275
BfaI CTAG 9 cut(s) 423, 618, 981, 1061, 1176, 1448, 2370, 2712, 3352
BfmI CTRYAG 3 cut(s) 1298, 1658, 2949
BfrI CTTAAG 2 cut(s) 401, 2108
BglI GCCNNNNNGGC 1 cut(s) 121
BglII AGATCT 1 cut(s) 1958
BlpI GCTNAGC 1 cut(s) 575
Bme18I GGWCC 1 cut(s) 419
BmgT120I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2194
BmiI GGNNCC 6 cut(s) 212, 213, 420, 2408, 2439, 2647
BmrI ACTGGG 3 cut(s) 210, 1623, 2620
BmsI GCATC 8 cut(s) 1222, 1434, 1510, 1519, 1595, 2689, 3025, 3214
BmtI GCTAGC 2 cut(s) 984, 1451
BmuI ACTGGG 3 cut(s) 210, 1623, 2620
BpiI GAAGAC 2 cut(s) 287, 1803
BpmI CTGGAG 4 cut(s) 959, 2004, 2346, 2828
Bpu10I CCTNAGC 3 cut(s) 2315, 2433, 2796
Bpu1102I GCTNAGC 1 cut(s) 575
Bpu14I TTCGAA 1 cut(s) 2524
BpuMI CCSGG 4 cut(s) 121, 247, 463, 2280
BsaBI GATNNNNATC 2 cut(s) 801, 1368
BsaHI GRCGYC 2 cut(s) 14, 2927
BsaI GGTCTC 1 cut(s) 179
BsaWI WCCGGW 2 cut(s) 195, 3237
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2177, 3083
Bse118I RCCGGY 3 cut(s) 106, 339, 3237
Bse1I ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1618, 2218, 2615
Bse3DI GCAATG 4 cut(s) 110, 675, 870, 1896
Bse8I GATNNNNATC 2 cut(s) 801, 1368
BseBI CCWGG 7 cut(s) 514, 1414, 1436, 2673, 2994, 3063, 3201
BseJI GATNNNNATC 2 cut(s) 801, 1368
BseLI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2177, 3083
BseMI GCAATG 4 cut(s) 110, 675, 870, 1896
BseMII CTCAG 6 cut(s) 75, 1032, 1250, 2329, 2787, 2823
BseNI ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1618, 2218, 2615
BsePI GCGCGC 1 cut(s) 152
BseRI GAGGAG 3 cut(s) 49, 338, 341
BseSI GKGCMC 3 cut(s) 214, 513, 1435
BseYI CCCAGC 1 cut(s) 836
Bsh1236I CGCG 3 cut(s) 154, 296, 3094
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2195, 2423
BshTI ACCGGT 1 cut(s) 3237
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 2 cut(s) 41, 1138
BsiSI CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2280, 3238
BsiWI CGTACG 1 cut(s) 309
BslFI GGGAC 2 cut(s) 89, 103
BslI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2177, 3083
BsmAI GTCTC 6 cut(s) 179, 842, 1596, 3092, 3148, 3275
BsmFI GGGAC 2 cut(s) 89, 103
BsmI GAATGC 3 cut(s) 2155, 3121, 3310
BsnI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2195, 2423
Bso31I GGTCTC 1 cut(s) 179
Bsp119I TTCGAA 1 cut(s) 2524
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 6 cut(s) 41, 214, 513, 1138, 1435, 2617
Bsp143I GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
Bsp1720I GCTNAGC 1 cut(s) 575
BspACI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1320
BspANI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2195, 2423
BspCNI CTCAG 6 cut(s) 76, 1031, 1249, 2328, 2788, 2824
BspFNI CGCG 3 cut(s) 154, 296, 3094
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 6 cut(s) 212, 213, 420, 2408, 2439, 2647
BspMAI CTGCAG 1 cut(s) 2953
BspOI GCTAGC 2 cut(s) 984, 1451
BspPI GGATC 5 cut(s) 1614, 1824, 2432, 2445, 3058
BspT104I TTCGAA 1 cut(s) 2524
BspTI CTTAAG 2 cut(s) 401, 2108
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 110, 675, 870, 1896
BsrFI RCCGGY 3 cut(s) 106, 339, 3237
BsrI ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1618, 2218, 2615
BssAI RCCGGY 3 cut(s) 106, 339, 3237
BssHII GCGCGC 1 cut(s) 152
BssMI GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
BssNAI GTATAC 2 cut(s) 935, 1631
BssNI GRCGYC 2 cut(s) 14, 2927
BssT1I CCWWGG 3 cut(s) 42, 93, 132
Bst1107I GTATAC 2 cut(s) 935, 1631
Bst2UI CCWGG 7 cut(s) 514, 1414, 1436, 2673, 2994, 3063, 3201
Bst4CI ACNGT 4 cut(s) 932, 2428, 2472, 2856
Bst6I CTCTTC 6 cut(s) 1599, 1854, 2726, 2814, 2992, 3312
BstACI GRCGYC 2 cut(s) 14, 2927
BstAFI CTTAAG 2 cut(s) 401, 2108
BstAPI GCANNNNNTGC 3 cut(s) 770, 860, 1529
BstBI TTCGAA 1 cut(s) 2524
BstDSI CCRYGG 1 cut(s) 2602
BstFNI CGCG 3 cut(s) 154, 296, 3094
BstHHI GCGC 4 cut(s) 154, 156, 3040, 3094
BstKTI GATC 9 cut(s) 565, 1294, 1622, 1819, 1961, 2357, 2440, 3053, 3148
BstMAI GTCTC 6 cut(s) 179, 842, 1596, 3092, 3148, 3275
BstMBI GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
BstMCI CGRYCG 1 cut(s) 200
BstNI CCWGG 7 cut(s) 514, 1414, 1436, 2673, 2994, 3063, 3201
BstNSI RCATGY 3 cut(s) 914, 1252, 2755
BstSFI CTRYAG 3 cut(s) 1298, 1658, 2949
BstSLI GKGCMC 3 cut(s) 214, 513, 1435
BstUI CGCG 3 cut(s) 154, 296, 3094
BstV2I GAAGAC 2 cut(s) 287, 1803
BstX2I RGATCY 5 cut(s) 1619, 1816, 1958, 2437, 3050
BstXI CCANNNNNNTGG 3 cut(s) 698, 1420, 3305
BstYI RGATCY 5 cut(s) 1619, 1816, 1958, 2437, 3050
BstZ17I GTATAC 2 cut(s) 935, 1631
BsuRI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2195, 2423
BtgI CCRYGG 1 cut(s) 2602
BtsI GCAGTG 1 cut(s) 1404
BtsIMutI CAGTG 5 cut(s) 223, 1026, 1404, 1515, 2424
CaiI CAGNNNCTG 2 cut(s) 770, 2083
CciI TCATGA 1 cut(s) 390
CfoI GCGC 4 cut(s) 154, 156, 3040, 3094
Cfr10I RCCGGY 3 cut(s) 106, 339, 3237
Cfr13I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2194
CseI GACGC 5 cut(s) 3, 302, 306, 776, 2916
Csp6I GTAC 7 cut(s) 310, 1105, 1611, 1686, 2494, 3108, 3262
CspAI ACCGGT 1 cut(s) 3237
CviQI GTAC 7 cut(s) 310, 1105, 1611, 1686, 2494, 3108, 3262
DpnI GATC 9 cut(s) 564, 1293, 1621, 1818, 1960, 2356, 2439, 3052, 3147
DpnII GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
DraI TTTAAA 3 cut(s) 585, 1942, 2206
DrdI GACNNNNNNGTC 1 cut(s) 2869
DseDI GACNNNNNNGTC 1 cut(s) 2869
EaeI YGGCCR 1 cut(s) 1317
Eam1104I CTCTTC 6 cut(s) 1599, 1854, 2726, 2814, 2992, 3312
EarI CTCTTC 6 cut(s) 1599, 1854, 2726, 2814, 2992, 3312
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 42, 93, 132
Eco24I GRGCYC 3 cut(s) 41, 214, 2617
Eco31I GGTCTC 1 cut(s) 179
Eco32I GATATC 2 cut(s) 2349, 2363
Eco47I GGWCC 1 cut(s) 419
Eco53kI GAGCTC 1 cut(s) 39
Eco57I CTGAAG 8 cut(s) 317, 596, 905, 1305, 1580, 2742, 2760, 2774
EcoICRI GAGCTC 1 cut(s) 39
EcoO109I RGGNCCY 2 cut(s) 211, 419
EcoRI GAATTC 1 cut(s) 1930
EcoRII CCWGG 7 cut(s) 512, 1412, 1434, 2671, 2992, 3061, 3199
EcoRV GATATC 2 cut(s) 2349, 2363
EcoT14I CCWWGG 3 cut(s) 42, 93, 132
EcoT22I ATGCAT 2 cut(s) 1534, 2155
EcoT38I GRGCYC 3 cut(s) 41, 214, 2617
ErhI CCWWGG 3 cut(s) 42, 93, 132
FalI AAGNNNNNCTT 8 cut(s) 1655, 1687, 2283, 2315, 2505, 2537, 2928, 2960
FaqI GGGAC 2 cut(s) 89, 103
FbaI TGATCA 1 cut(s) 3145
FblI GTMKAC 2 cut(s) 934, 1630
FriOI GRGCYC 3 cut(s) 41, 214, 2617
FspBI CTAG 9 cut(s) 423, 618, 981, 1061, 1176, 1448, 2370, 2712, 3352
GlaI GCGC 4 cut(s) 153, 155, 3039, 3093
GsaI CCCAGC 1 cut(s) 840
GsuI CTGGAG 4 cut(s) 959, 2004, 2346, 2828
HaeIII GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2195, 2423
HapII CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2280, 3238
HgaI GACGC 5 cut(s) 3, 302, 306, 776, 2916
HhaI GCGC 4 cut(s) 154, 156, 3040, 3094
Hin1I GRCGYC 2 cut(s) 14, 2927
Hin6I GCGC 4 cut(s) 152, 154, 3038, 3092
HinP1I GCGC 4 cut(s) 152, 154, 3038, 3092
HincII GTYRAC 1 cut(s) 2990
HindII GTYRAC 1 cut(s) 2990
HindIII AAGCTT 1 cut(s) 1739
HpaII CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2280, 3238
HphI GGTGA 4 cut(s) 380, 1106, 3006, 3145
Hpy166II GTNNAC 9 cut(s) 223, 428, 739, 935, 1631, 1686, 2094, 2990, 3014
Hpy8I GTNNAC 9 cut(s) 223, 428, 739, 935, 1631, 1686, 2094, 2990, 3014
Hpy99I CGWCG 4 cut(s) 19, 25, 151, 322
HpyCH4III ACNGT 4 cut(s) 932, 2428, 2472, 2856
HpyCH4IV ACGT 5 cut(s) 312, 375, 458, 1502, 2135
HpySE526I ACGT 5 cut(s) 312, 375, 458, 1502, 2135
Hsp92I GRCGYC 2 cut(s) 14, 2927
HspAI GCGC 4 cut(s) 152, 154, 3038, 3092
KroI GCCGGC 2 cut(s) 106, 339
KroNI GCCGGC 2 cut(s) 108, 341
Ksp22I TGATCA 1 cut(s) 3145
Kzo9I GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
LmnI GCTCC 9 cut(s) 36, 44, 164, 328, 833, 1141, 2809, 2842, 3300
LweI GCATC 8 cut(s) 1222, 1434, 1510, 1519, 1595, 2689, 3025, 3214
MaeI CTAG 9 cut(s) 423, 618, 981, 1061, 1176, 1448, 2370, 2712, 3352
MaeII ACGT 5 cut(s) 312, 375, 458, 1502, 2135
MaeIII GTNAC 6 cut(s) 368, 478, 712, 1653, 2044, 2606
MalI GATC 9 cut(s) 564, 1293, 1621, 1818, 1960, 2356, 2439, 3052, 3147
MbiI CCGCTC 1 cut(s) 159
MboI GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 5 cut(s) 1619, 1816, 1958, 2437, 3050
MhlI GDGCHC 6 cut(s) 41, 214, 513, 1138, 1435, 2617
MlyI GAGTC 8 cut(s) 311, 446, 904, 1661, 2153, 2950, 2971, 3254
MmeI TCCRAC 4 cut(s) 300, 1836, 2202, 3103
Mph1103I ATGCAT 2 cut(s) 1534, 2155
MroNI GCCGGC 2 cut(s) 106, 339
MroXI GAANNNNTTC 2 cut(s) 677, 1835
MslI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1923, 2372, 3210, 3303
MspA1I CMGCKG 1 cut(s) 1322
MspCI CTTAAG 2 cut(s) 401, 2108
MspI CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2280, 3238
MunI CAATTG 1 cut(s) 1215
Mva1269I GAATGC 3 cut(s) 2155, 3121, 3310
MvaI CCWGG 7 cut(s) 514, 1414, 1436, 2673, 2994, 3063, 3201
MvnI CGCG 3 cut(s) 154, 296, 3094
NaeI GCCGGC 2 cut(s) 108, 341
NciI CCSGG 4 cut(s) 121, 247, 463, 2280
NdeII GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
NgoMIV GCCGGC 2 cut(s) 106, 339
NheI GCTAGC 2 cut(s) 980, 1447
NlaIV GGNNCC 6 cut(s) 212, 213, 420, 2408, 2439, 2647
NmeAIII GCCGAG 2 cut(s) 118, 208
NmuCI GTSAC 4 cut(s) 368, 478, 712, 1653
NsiI ATGCAT 2 cut(s) 1534, 2155
NspI RCATGY 3 cut(s) 914, 1252, 2755
NspV TTCGAA 1 cut(s) 2524
PagI TCATGA 1 cut(s) 390
PalAI GGCGCGCC 1 cut(s) 152
PasI CCCWGGG 1 cut(s) 513
PauI GCGCGC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 29
PctI GAATGC 3 cut(s) 2155, 3121, 3310
PdiI GCCGGC 2 cut(s) 108, 341
PdmI GAANNNNTTC 2 cut(s) 677, 1835
PfeI GAWTC 7 cut(s) 59, 242, 673, 1162, 1865, 2030, 3026
Pfl23II CGTACG 1 cut(s) 309
PflMI CCANNNNNTGG 1 cut(s) 2177
PinAI ACCGGT 1 cut(s) 3237
PleI GAGTC 8 cut(s) 310, 445, 903, 1660, 2153, 2949, 2970, 3253
PpsI GAGTC 8 cut(s) 310, 445, 903, 1660, 2153, 2949, 2970, 3253
PpuMI RGGWCCY 1 cut(s) 419
PsiI TTATAA 1 cut(s) 777
Psp124BI GAGCTC 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 375
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 7 cut(s) 512, 1412, 1434, 2671, 2992, 3061, 3199
PspFI CCCAGC 1 cut(s) 836
PspGI CCWGG 7 cut(s) 512, 1412, 1434, 2671, 2992, 3061, 3199
PspLI CGTACG 1 cut(s) 309
PspN4I GGNNCC 6 cut(s) 212, 213, 420, 2408, 2439, 2647
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2194
PspPPI RGGWCCY 1 cut(s) 419
PsrI GAACNNNNNNTAC 2 cut(s) 2289, 2321
PstI CTGCAG 1 cut(s) 2953
PstNI CAGNNNCTG 2 cut(s) 770, 2083
PsuI RGATCY 5 cut(s) 1619, 1816, 1958, 2437, 3050
PteI GCGCGC 1 cut(s) 152
RsaI GTAC 7 cut(s) 311, 1106, 1612, 1687, 2495, 3109, 3263
RsaNI GTAC 7 cut(s) 310, 1105, 1611, 1686, 2494, 3108, 3262
RseI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1923, 2372, 3210, 3303
SacI GAGCTC 1 cut(s) 41
Sau3AI GATC 9 cut(s) 562, 1291, 1619, 1816, 1958, 2354, 2437, 3050, 3145
Sau96I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2194
SchI GAGTC 8 cut(s) 311, 446, 904, 1661, 2153, 2950, 2971, 3254
SduI GDGCHC 6 cut(s) 41, 214, 513, 1138, 1435, 2617
SfaNI GCATC 8 cut(s) 1222, 1434, 1510, 1519, 1595, 2689, 3025, 3214
SfcI CTRYAG 3 cut(s) 1298, 1658, 2949
SfuI TTCGAA 1 cut(s) 2524
SgsI GGCGCGCC 1 cut(s) 152
SinI GGWCC 1 cut(s) 419
SmiI ATTTAAAT 1 cut(s) 585
SmiMI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1923, 2372, 3210, 3303
SmlI CTYRAG 2 cut(s) 401, 2108
SmoI CTYRAG 2 cut(s) 401, 2108
SsiI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1320
SspMI CTAG 9 cut(s) 423, 618, 981, 1061, 1176, 1448, 2370, 2712, 3352
SstI GAGCTC 1 cut(s) 41
StyI CCWWGG 3 cut(s) 42, 93, 132
SwaI ATTTAAAT 1 cut(s) 585
TaaI ACNGT 4 cut(s) 932, 2428, 2472, 2856
TaiI ACGT 5 cut(s) 315, 378, 461, 1505, 2138
TaqI TCGA 6 cut(s) 23, 1081, 1922, 2524, 3019, 3055
TatI WGTACW 3 cut(s) 1610, 1685, 3261
TauI GCSGC 4 cut(s) 70, 106, 159, 1322
TfiI GAWTC 7 cut(s) 59, 242, 673, 1162, 1865, 2030, 3026
TscAI CASTG 5 cut(s) 223, 1026, 1411, 1522, 2431
TseFI GTSAC 4 cut(s) 368, 478, 712, 1653
Tsp45I GTSAC 4 cut(s) 368, 478, 712, 1653
TspGWI ACGGA 4 cut(s) 299, 860, 2591, 2731
TspRI CASTG 5 cut(s) 223, 1026, 1411, 1522, 2431
Van91I CCANNNNNTGG 1 cut(s) 2177
Vha464I CTTAAG 2 cut(s) 401, 2108
VpaK11BI GGWCC 1 cut(s) 419
XapI RAATTY 9 cut(s) 693, 1005, 1044, 1278, 1541, 1930, 2387, 3127, 3140
XbaI TCTAGA 2 cut(s) 617, 1060
XceI RCATGY 3 cut(s) 914, 1252, 2755
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmiI GTMKAC 2 cut(s) 934, 1630
XmnI GAANNNNTTC 2 cut(s) 677, 1835
XspI CTAG 9 cut(s) 423, 618, 981, 1061, 1176, 1448, 2370, 2712, 3352
Zsp2I ATGCAT 2 cut(s) 1534, 2155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.