Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005645

Physical Location & Seq

Genomic Coordinates Forward (+)

14081451 .. 14087460

Gene Structure 6010 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0152000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGCTGCACAGGAAGACCCTGATAAAAAAGGTGGTGTCTGGGTTTTGGACCAGCAACTTGATCAGCCCATTGATGTGGAGGCCAAGAAGGTCAAAGAAACGAACATTCACAAGAACTGTTCATCAATGATGCTTCTGCAACTTGCATTTCAAAGCCTTGGTGTGGTCTATGGAGACTTGGGCACATCTCCTTTATATGTATTCTATAATATATTTCCTGATGGGGTTGATGACAAAGAGGATGTTATTGGAGCTTTATCTGTGATTATATGGTCTCTTACTTTCGTTCCACTTCTGAAGTATGTCTTTATTGTCTGTAGAGCAAATGACAATGGTCAAGGCGGAACATTTGCTCTTTATTCATTACTTTGTCGACATGCAAAAATAAAGAGTGTTCCTAACCAAGACGTAACTGATGAGGAGGTAACAACATTTAGTCGTTCTACATTTGGTGAGAAATCATTTGCAGCAAGAATCAAGAGAGGGTTGGAGAAACATGAATTCTTGCAGAACATGCTTCTTATCCTTGTGCTGATCGGCTCTTGCATGGTGATTGGGGATGGGATTTTGACTCCAGCCATATCAGTTCTTTCAGCTGTTGGTGGGATGAATGTGCATCACAAGGGGATTAGTAAGGAAATGGTCGTGCTCTTTGCTGTTGCCATACTGGTACTTTTGTTTATCATGCAACAATATGGCACAGGCAAAGTTTGGTGGCTGTTTGCACCAATAGTACTTCTTTGGCTTCTCTTAATTGGAGGAATTGGCATCTTCAACATTAAGAAGTATGATAGTAGCATTTTAAAAGCCTTTTCACCAGTGTATATGTATCGATATTTTAAGAGGAGAGGTCGACCTGGGTGGGAGTCTCTAGGAGGCACGGAAACACTTTTCGCTGACCTAAACCATTTCCCAGTCCTGTCCATACAGATTGCTTTTACGGTAGTTGTATTTCCTTGCCTTCTTTTAGCATACTGTGGTCAAGCTGCGTACCTCATGAAAAATTCCAACAATATGGACCGTGCTTTTTATCAGTCTGTTCCAGACACTATATATTGGCCTGTGTATGGCATTGCAATTGCAGCTGCTATAGTTGCAAGTCAGTCCACCATAACAGCAACTTTTTCACTAATTAAGCAGGCCCTTTCACTTGGCTGCTTCCCAAGAGTCAAAGTTATATATACTTCAAGGCACCGCCACCAGATATATATTCCAGATGTTAATTGGATTCTTATGATCCTCTGCATTTCTGTGACAGCTGGATTTAACCAAAAAACCCAGATTGGAAATGCTGCTGGGACGGCAGTTGTTATAGTCATGTTGGTCACCACTTTTCTTATGACTTTGGTGATGATATTAGTGTGGCGCGTACATTGGATTTTTGTCCTCCTCTTCACCAGCTTATCATTACTGGTGGAGGGCCCTTACCTATCTGCTGTACTCCTTAAGGTTGATGAAGGTGGTTGGGCGCCTCTTGTGATTGCAACAGCTTTCTTTATCGTGATGTATGTTTGGAATTACGGTACTGTAAGGCGATATGACATTGAAATGCATAGTAAGGTGTCAATGGCTTGGATTATTGGACTTGGTCCGAGTTTAGGACTGGTTCGCGTACCTGGCATAGTACTAGTGTATTCTGAGCTTGCTAGTGGAGTACCCCGCATCTTCTCTCACTTTATAACCAACCTGCCTGCCATCCATTCAGTTGTCATATTTGTCTGCGTGAAGTACCTCCCTGTCTGCACAGTCCCTGAGGAAGAGCGGTTCTTTGTAAAGCGGATCGGACCTAATAATTTCCACATGTTCCGTTGTTTTGTGAGATATGGCTACAAAGATGACCACAGGAAAGATGATGATTTTGAGGAAAAGCTCTTTGACAGCCTTTTCATGTTTATCCGGCTTGAGTCCCTAATGGAAGCGTCTTCTGATACTGATGATGTGTCTAGTATACTTGACCAGCAAGCTTTCGAATCAAGAGAAATCCCGTTTGACAACAACGTTAGTATACCTTTCTCCAATGCAGACCTCACAATTTCATCCGTGGAGACAATGACAATAACGGCGGAGGATGTGTCATTGAATGCAAGTCGTGCATTGACGATGTCACACCGGACAAGCATCAACGCCGAGATTGAGATGAATGAGATAGAATTCTTGCACAACTGTAAAGATGCAGGGGTAGTTCACATGATGGGAAACACCATAGTAAGAGCTAGGAGGGATTCTAATTTTGTGAAGCGGATAGTTATAGATTATCTGTATTCATTTCTTAGGAAGATATGCAGGGGAAACAGTGTATTGTTCTTCGTTCCTCAAGAGAGCCTCTTGAATGTTGGACAGATACTCTATGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006950 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009635 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009737 GO:0009765 GO:0009768 GO:0009769 GO:0009941 GO:0009987 GO:0010033 GO:0010119 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019684 GO:0019904 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0033993 GO:0034357 GO:0042221 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0065007 GO:0097159 GO:0097305 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00196 ko01100 map00196 map01100

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

784

Amino Acids

88.11

Weight (kDa)

6.79

Isoelectric Point (pI)

38.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	48 - 526	2.2e-146	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	539 - 781	1.5e-23	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27370 AT4G27370 AT4G27370 AT4G27370 AT5G54280 AT5G54280
fragaria_vesca	FvH4_3g21010 FvH4_3g21010 FvH4_3g21010 FvH4_3g21010 FvH4_3g21010 FvH4_3g21010
malus_domestica	MD03G1219000.v1.1 MD11G1237000.v1.1
prunus_persica	Prupe.4G190400_v2.0.a1
pyrus_communis	pycom03g16810 pycom11g20840
rosa_chinensis	RchiOBHm_Chr5g0036031 RchiOBHm_Chr5g0036041
rosa_laevigata	RLG00000033660
rosa_multiflora	Rmu_sc0001493.1_g000006
rosa_roxburghii	Rroxscaffold_1G00044720
rosa_rugosa	Rorug05G0152000
rosa_samantha	Rh5AG246300 Rh5BG246600 Rh5CG277600 Rh5DG255000
rosa_wichuraiana	Rw5G022610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1679
Acc36I	ACCTGC	1 cut(s)	1695
AccB1I	GGYRCC	2 cut(s)	1191, 1468
AccBSI	CCGCTC	1 cut(s)	1762
AccI	GTMKAC	4 cut(s)	373, 853, 1948, 2005
AccII	CGCG	2 cut(s)	1368, 1611
AciI	CCGC	7 cut(s)	342, 1195, 1660, 1762, 1777, 2063, 2239
AclI	AACGTT	1 cut(s)	1998
AclWI	GGATC	2 cut(s)	1231, 1787
AcsI	RAATTY	3 cut(s)	500, 1003, 2150
AcuI	CTGAAG	1 cut(s)	317
AcyI	GRCGYC	1 cut(s)	1469
AfiI	CCNNNNNNNGG	3 cut(s)	163, 1067, 1598
AflII	CTTAAG	1 cut(s)	1445
AflIII	ACRYGT	1 cut(s)	1800
AgsI	TTSAA	6 cut(s)	152, 775, 1188, 1547, 2080, 2329
AhlI	ACTAGT	1 cut(s)	1627
AjnI	CCWGG	2 cut(s)	856, 1615
AloI	GAACNNNNNNTCC	2 cut(s)	1748, 1780
Alw21I	GWGCWC	1 cut(s)	651
Alw26I	GTCTC	4 cut(s)	168, 279, 873, 2039
AlwI	GGATC	2 cut(s)	1231, 1787
AlwNI	CAGNNNCTG	1 cut(s)	1751
AoxI	GGCC	4 cut(s)	81, 1058, 1140, 1420
ApaI	GGGCCC	1 cut(s)	1424
ApeKI	GCWGC	7 cut(s)	5, 467, 986, 1082, 1085, 1155, 1292
ApoI	RAATTY	3 cut(s)	500, 1003, 2150
AspLEI	GCGC	2 cut(s)	1368, 1471
AspS9I	GGNCC	7 cut(s)	49, 1018, 1141, 1420, 1421, 1589, 1784
AsuHPI	GGTGA	6 cut(s)	464, 562, 807, 1318, 1360, 1387
AsuII	TTCGAA	1 cut(s)	1968
AvaII	GGWCC	4 cut(s)	49, 1018, 1589, 1784
AxyI	CCTNAGG	1 cut(s)	1752
BaeGI	GKGCMC	2 cut(s)	185, 1424
BaeI	ACNNNNGTAYC	2 cut(s)	662, 695
BanI	GGYRCC	2 cut(s)	1191, 1468
BanII	GRGCYC	1 cut(s)	1424
BbsI	GAAGAC	2 cut(s)	21, 1914
Bbv12I	GWGCWC	1 cut(s)	651
BbvI	GCAGC	6 cut(s)	479, 973, 1072, 1094, 1142, 1279
BccI	CCATC	4 cut(s)	215, 554, 1703, 2185
BceAI	ACGGC	2 cut(s)	1317, 2076
BciT130I	CCWGG	2 cut(s)	858, 1617
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	4 cut(s)	168, 279, 873, 2039
BcuI	ACTAGT	1 cut(s)	1627
BfaI	CTAG	5 cut(s)	872, 1628, 1647, 1944, 2214
BfmI	CTRYAG	2 cut(s)	316, 1089
BfoI	RGCGCY	1 cut(s)	1472
BfrI	CTTAAG	1 cut(s)	1445
BfuAI	ACCTGC	1 cut(s)	1695
BisI	GCNGC	7 cut(s)	6, 468, 987, 1083, 1086, 1156, 1293
BlsI	GCNGC	7 cut(s)	7, 469, 988, 1084, 1087, 1157, 1294
BmcAI	AGTACT	2 cut(s)	735, 1626
Bme1390I	CCNGG	2 cut(s)	858, 1617
Bme18I	GGWCC	4 cut(s)	49, 1018, 1589, 1784
BmgT120I	GGNCC	7 cut(s)	49, 1018, 1141, 1420, 1421, 1589, 1784
BmiI	GGNNCC	3 cut(s)	1193, 1422, 1470
BmrFI	CCNGG	2 cut(s)	858, 1617
BmrI	ACTGGG	1 cut(s)	908
BmsI	GCATC	6 cut(s)	120, 625, 777, 1671, 2127, 2161
BmuI	ACTGGG	1 cut(s)	908
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	2 cut(s)	21, 1914
BpmI	CTGGAG	1 cut(s)	558
Bpu14I	TTCGAA	1 cut(s)	1968
BpuEI	CTTGAG	2 cut(s)	1922, 2298
Bsa29I	ATCGAT	1 cut(s)	832
BsaHI	GRCGYC	1 cut(s)	1469
BsaI	GGTCTC	1 cut(s)	279
BsaJI	CCNNGG	3 cut(s)	157, 857, 2040
BsaWI	WCCGGW	1 cut(s)	2109
BsaXI	ACNNNNNCTCC	2 cut(s)	2057, 2087
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 1067, 1598
Bse1I	ACTGG	5 cut(s)	672, 818, 914, 1416, 1608
Bse21I	CCTNAGG	1 cut(s)	1752
Bse3DI	GCAATG	1 cut(s)	1071
BseBI	CCWGG	2 cut(s)	858, 1617
BseCI	ATCGAT	1 cut(s)	832
BseDI	CCNNGG	3 cut(s)	157, 857, 2040
BseGI	GGATG	6 cut(s)	247, 565, 612, 1695, 2036, 2074
BseLI	CCNNNNNNNGG	3 cut(s)	163, 1067, 1598
BseMI	GCAATG	1 cut(s)	1071
BseMII	CTCAG	2 cut(s)	1629, 1743
BseNI	ACTGG	5 cut(s)	672, 818, 914, 1416, 1608
BseRI	GAGGAG	3 cut(s)	434, 859, 1379
BseSI	GKGCMC	2 cut(s)	185, 1424
BseXI	GCAGC	6 cut(s)	479, 973, 1072, 1094, 1142, 1279
BseYI	CCCAGC	1 cut(s)	1295
BsgI	GTGCAG	1 cut(s)	1726
Bsh1236I	CGCG	2 cut(s)	1368, 1611
BshFI	GGCC	4 cut(s)	83, 1060, 1142, 1422
BshNI	GGYRCC	2 cut(s)	1191, 1468
BshVI	ATCGAT	1 cut(s)	832
BsiHKAI	GWGCWC	1 cut(s)	651
BsiSI	CCGG	2 cut(s)	1897, 2110
BslFI	GGGAC	3 cut(s)	1312, 1733, 1891
BslI	CCNNNNNNNGG	3 cut(s)	163, 1067, 1598
BsmAI	GTCTC	4 cut(s)	168, 279, 873, 2039
BsmFI	GGGAC	3 cut(s)	1312, 1733, 1891
BsmI	GAATGC	1 cut(s)	2086
BsnI	GGCC	4 cut(s)	83, 1060, 1142, 1422
Bso31I	GGTCTC	1 cut(s)	279
Bsp119I	TTCGAA	1 cut(s)	1968
Bsp120I	GGGCCC	1 cut(s)	1420
Bsp1286I	GDGCHC	3 cut(s)	185, 651, 1424
Bsp143I	GATC	4 cut(s)	61, 534, 1236, 1779
BspACI	CCGC	7 cut(s)	342, 1195, 1660, 1762, 1777, 2063, 2239
BspANI	GGCC	4 cut(s)	83, 1060, 1142, 1422
BspCNI	CTCAG	2 cut(s)	1630, 1744
BspDI	ATCGAT	1 cut(s)	832
BspFNI	CGCG	2 cut(s)	1368, 1611
BspHI	TCATGA	1 cut(s)	996
BspLI	GGNNCC	3 cut(s)	1193, 1422, 1470
BspMI	ACCTGC	1 cut(s)	1695
BspPI	GGATC	2 cut(s)	1231, 1787
BspQI	GCTCTTC	1 cut(s)	1752
BspT104I	TTCGAA	1 cut(s)	1968
BspT107I	GGYRCC	2 cut(s)	1191, 1468
BspTI	CTTAAG	1 cut(s)	1445
BspTNI	GGTCTC	1 cut(s)	279
BsrBI	CCGCTC	1 cut(s)	1762
BsrDI	GCAATG	1 cut(s)	1071
BsrI	ACTGG	5 cut(s)	672, 818, 914, 1416, 1608
BssECI	CCNNGG	3 cut(s)	157, 857, 2040
BssMI	GATC	4 cut(s)	61, 534, 1236, 1779
BssNAI	GTATAC	2 cut(s)	1949, 2006
BssNI	GRCGYC	1 cut(s)	1469
BssT1I	CCWWGG	1 cut(s)	157
Bst1107I	GTATAC	2 cut(s)	1949, 2006
Bst2UI	CCWGG	2 cut(s)	858, 1617
Bst4CI	ACNGT	9 cut(s)	119, 943, 977, 1022, 1523, 1528, 1747, 2165, 2294
Bst6I	CTCTTC	2 cut(s)	1397, 1752
BstACI	GRCGYC	1 cut(s)	1469
BstAFI	CTTAAG	1 cut(s)	1445
BstAPI	GCANNNNNTGC	2 cut(s)	514, 2090
BstBI	TTCGAA	1 cut(s)	1968
BstC8I	GCNNGC	4 cut(s)	1140, 1644, 1692, 1962
BstDEI	CTNAG	3 cut(s)	1638, 1752, 2270
BstDSI	CCRYGG	1 cut(s)	2040
BstEII	GGTNACC	1 cut(s)	1324
BstF5I	GGATG	6 cut(s)	247, 565, 612, 1695, 2036, 2074
BstFNI	CGCG	2 cut(s)	1368, 1611
BstH2I	RGCGCY	1 cut(s)	1472
BstHHI	GCGC	2 cut(s)	1368, 1471
BstKTI	GATC	4 cut(s)	64, 537, 1239, 1782
BstMAI	GTCTC	4 cut(s)	168, 279, 873, 2039
BstMBI	GATC	4 cut(s)	61, 534, 1236, 1779
BstMWI	GCNNNNNNNGC	6 cut(s)	514, 1082, 1094, 1301, 1617, 2090
BstNI	CCWGG	2 cut(s)	858, 1617
BstNSI	RCATGY	3 cut(s)	380, 517, 1804
BstPAI	GACNNNNGTC	1 cut(s)	333
BstPI	GGTNACC	1 cut(s)	1324
BstSCI	CCNGG	2 cut(s)	856, 1615
BstSFI	CTRYAG	2 cut(s)	316, 1089
BstSLI	GKGCMC	2 cut(s)	185, 1424
BstUI	CGCG	2 cut(s)	1368, 1611
BstV1I	GCAGC	6 cut(s)	479, 973, 1072, 1094, 1142, 1279
BstV2I	GAAGAC	2 cut(s)	21, 1914
BstXI	CCANNNNNNTGG	2 cut(s)	76, 1015
BstZ17I	GTATAC	2 cut(s)	1949, 2006
Bsu15I	ATCGAT	1 cut(s)	832
Bsu36I	CCTNAGG	1 cut(s)	1752
BsuRI	GGCC	4 cut(s)	83, 1060, 1142, 1422
BsuTUI	ATCGAT	1 cut(s)	832
BtgI	CCRYGG	1 cut(s)	2040
BtsCI	GGATG	6 cut(s)	247, 565, 612, 1695, 2036, 2074
BtsIMutI	CAGTG	2 cut(s)	825, 2299
BveI	ACCTGC	1 cut(s)	1695
Cac8I	GCNNGC	4 cut(s)	1140, 1644, 1692, 1962
CaiI	CAGNNNCTG	1 cut(s)	1751
CciI	TCATGA	1 cut(s)	996
CfoI	GCGC	2 cut(s)	1368, 1471
Cfr13I	GGNCC	7 cut(s)	49, 1018, 1141, 1420, 1421, 1589, 1784
ClaI	ATCGAT	1 cut(s)	832
CseI	GACGC	1 cut(s)	1908
DdeI	CTNAG	3 cut(s)	1638, 1752, 2270
DinI	GGCGCC	1 cut(s)	1470
DpnI	GATC	4 cut(s)	63, 536, 1238, 1781
DpnII	GATC	4 cut(s)	61, 534, 1236, 1779
DraI	TTTAAA	1 cut(s)	804
Eam1104I	CTCTTC	2 cut(s)	1397, 1752
EarI	CTCTTC	2 cut(s)	1397, 1752
EciI	GGCGGA	2 cut(s)	357, 2078
Eco130I	CCWWGG	1 cut(s)	157
Eco24I	GRGCYC	1 cut(s)	1424
Eco31I	GGTCTC	1 cut(s)	279
Eco47I	GGWCC	4 cut(s)	49, 1018, 1589, 1784
Eco57I	CTGAAG	1 cut(s)	317
Eco81I	CCTNAGG	1 cut(s)	1752
Eco91I	GGTNACC	1 cut(s)	1324
EcoO109I	RGGNCCY	3 cut(s)	1141, 1420, 1421
EcoO65I	GGTNACC	1 cut(s)	1324
EcoRI	GAATTC	2 cut(s)	500, 2150
EcoRII	CCWGG	2 cut(s)	856, 1615
EcoT14I	CCWWGG	1 cut(s)	157
EcoT22I	ATGCAT	1 cut(s)	1554
EcoT38I	GRGCYC	1 cut(s)	1424
EgeI	GGCGCC	1 cut(s)	1470
EheI	GGCGCC	1 cut(s)	1470
ErhI	CCWWGG	1 cut(s)	157
FalI	AAGNNNNNCTT	2 cut(s)	290, 322
FaqI	GGGAC	3 cut(s)	1312, 1733, 1891
FauI	CCCGC	1 cut(s)	1667
FbaI	TGATCA	1 cut(s)	61
FblI	GTMKAC	4 cut(s)	373, 853, 1948, 2005
Fnu4HI	GCNGC	7 cut(s)	6, 468, 987, 1083, 1086, 1156, 1293
FokI	GGATG	6 cut(s)	254, 572, 619, 1682, 2023, 2081
FriOI	GRGCYC	1 cut(s)	1424
Fsp4HI	GCNGC	7 cut(s)	6, 468, 987, 1083, 1086, 1156, 1293
FspBI	CTAG	5 cut(s)	872, 1628, 1647, 1944, 2214
GlaI	GCGC	2 cut(s)	1367, 1470
GluI	GCNGC	7 cut(s)	6, 468, 987, 1083, 1086, 1156, 1293
GsaI	CCCAGC	1 cut(s)	1299
GsuI	CTGGAG	1 cut(s)	558
HaeII	RGCGCY	1 cut(s)	1472
HaeIII	GGCC	4 cut(s)	83, 1060, 1142, 1422
HapII	CCGG	2 cut(s)	1897, 2110
HgaI	GACGC	1 cut(s)	1908
HhaI	GCGC	2 cut(s)	1368, 1471
Hin1I	GRCGYC	1 cut(s)	1469
Hin6I	GCGC	2 cut(s)	1366, 1469
HinP1I	GCGC	2 cut(s)	1366, 1469
HincII	GTYRAC	2 cut(s)	374, 854
HindII	GTYRAC	2 cut(s)	374, 854
HindIII	AAGCTT	1 cut(s)	1962
HinfI	GANTC	8 cut(s)	474, 571, 866, 1167, 1228, 1904, 1970, 2222
HpaII	CCGG	2 cut(s)	1897, 2110
HphI	GGTGA	6 cut(s)	464, 562, 807, 1318, 1360, 1387
Hpy166II	GTNNAC	6 cut(s)	374, 854, 1107, 1949, 2006, 2185
Hpy188I	TCNGA	5 cut(s)	297, 1593, 1639, 1784, 1927
Hpy188III	TCNNGA	9 cut(s)	218, 478, 997, 1043, 1214, 1501, 1974, 2315, 2326
Hpy8I	GTNNAC	6 cut(s)	374, 854, 1107, 1949, 2006, 2185
HpyAV	CCTTC	3 cut(s)	82, 971, 1451
HpyCH4III	ACNGT	9 cut(s)	119, 943, 977, 1022, 1523, 1528, 1747, 2165, 2294
HpyCH4IV	ACGT	2 cut(s)	408, 1998
HpyF10VI	GCNNNNNNNGC	6 cut(s)	514, 1082, 1094, 1301, 1617, 2090
HpyF3I	CTNAG	3 cut(s)	1638, 1752, 2270
HpySE526I	ACGT	2 cut(s)	408, 1998
Hsp92I	GRCGYC	1 cut(s)	1469
HspAI	GCGC	2 cut(s)	1366, 1469
KasI	GGCGCC	1 cut(s)	1468
Ksp22I	TGATCA	1 cut(s)	61
Kzo9I	GATC	4 cut(s)	61, 534, 1236, 1779
LguI	GCTCTTC	1 cut(s)	1752
LmnI	GCTCC	1 cut(s)	251
Lsp1109I	GCAGC	6 cut(s)	479, 973, 1072, 1094, 1142, 1279
LweI	GCATC	6 cut(s)	120, 625, 777, 1671, 2127, 2161
MaeI	CTAG	5 cut(s)	872, 1628, 1647, 1944, 2214
MaeII	ACGT	2 cut(s)	408, 1998
MaeIII	GTNAC	5 cut(s)	409, 424, 1252, 1324, 2103
MalI	GATC	4 cut(s)	63, 536, 1238, 1781
MbiI	CCGCTC	1 cut(s)	1762
MboI	GATC	4 cut(s)	61, 534, 1236, 1779
MboII	GAAGA	8 cut(s)	26, 763, 1384, 1657, 1769, 1914, 2287, 2296
MfeI	CAATTG	1 cut(s)	1077
MhlI	GDGCHC	3 cut(s)	185, 651, 1424
Mly113I	GGCGCC	1 cut(s)	1469
MlyI	GAGTC	4 cut(s)	565, 875, 1176, 1913
MmeI	TCCRAC	3 cut(s)	468, 1032, 2314
Mph1103I	ATGCAT	1 cut(s)	1554
MseI	TTAA	8 cut(s)	752, 780, 803, 840, 1134, 1221, 1266, 1446
MslI	CAYNNNNRTG	3 cut(s)	74, 1250, 1547
MspA1I	CMGCKG	3 cut(s)	596, 1085, 1259
MspCI	CTTAAG	1 cut(s)	1445
MspI	CCGG	2 cut(s)	1897, 2110
MspR9I	CCNGG	2 cut(s)	858, 1617
MunI	CAATTG	1 cut(s)	1077
Mva1269I	GAATGC	1 cut(s)	2086
MvaI	CCWGG	2 cut(s)	858, 1617
MvnI	CGCG	2 cut(s)	1368, 1611
MwoI	GCNNNNNNNGC	6 cut(s)	514, 1082, 1094, 1301, 1617, 2090
NarI	GGCGCC	1 cut(s)	1469
NdeII	GATC	4 cut(s)	61, 534, 1236, 1779
NlaIV	GGNNCC	3 cut(s)	1193, 1422, 1470
NmeAIII	GCCGAG	1 cut(s)	2152
NmuCI	GTSAC	3 cut(s)	1252, 1324, 2103
NsiI	ATGCAT	1 cut(s)	1554
NspI	RCATGY	3 cut(s)	380, 517, 1804
NspV	TTCGAA	1 cut(s)	1968
PagI	TCATGA	1 cut(s)	996
PciI	ACATGT	1 cut(s)	1800
PciSI	GCTCTTC	1 cut(s)	1752
PctI	GAATGC	1 cut(s)	2086
PfeI	GAWTC	4 cut(s)	474, 1228, 1970, 2222
PflFI	GACNNNGTC	2 cut(s)	1587, 2101
PkrI	GCNGC	7 cut(s)	7, 469, 988, 1084, 1087, 1157, 1294
PleI	GAGTC	4 cut(s)	565, 874, 1175, 1912
PluTI	GGCGCC	1 cut(s)	1472
PpsI	GAGTC	4 cut(s)	565, 874, 1175, 1912
PscI	ACATGT	1 cut(s)	1800
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	1679
Psp1406I	AACGTT	1 cut(s)	1998
Psp6I	CCWGG	2 cut(s)	856, 1615
PspEI	GGTNACC	1 cut(s)	1324
PspFI	CCCAGC	1 cut(s)	1295
PspGI	CCWGG	2 cut(s)	856, 1615
PspN4I	GGNNCC	3 cut(s)	1193, 1422, 1470
PspOMI	GGGCCC	1 cut(s)	1420
PspPI	GGNCC	7 cut(s)	49, 1018, 1141, 1420, 1421, 1589, 1784
PstNI	CAGNNNCTG	1 cut(s)	1751
PsyI	GACNNNGTC	2 cut(s)	1587, 2101
PvuII	CAGCTG	3 cut(s)	596, 1085, 1259
RseI	CAYNNNNRTG	3 cut(s)	74, 1250, 1547
SalI	GTCGAC	2 cut(s)	372, 852
SapI	GCTCTTC	1 cut(s)	1752
SaqAI	TTAA	8 cut(s)	752, 780, 803, 840, 1134, 1221, 1266, 1446
SatI	GCNGC	7 cut(s)	6, 468, 987, 1083, 1086, 1156, 1293
Sau3AI	GATC	4 cut(s)	61, 534, 1236, 1779
Sau96I	GGNCC	7 cut(s)	49, 1018, 1141, 1420, 1421, 1589, 1784
ScaI	AGTACT	2 cut(s)	735, 1626
SchI	GAGTC	4 cut(s)	565, 875, 1176, 1913
ScrFI	CCNGG	2 cut(s)	858, 1617
SduI	GDGCHC	3 cut(s)	185, 651, 1424
SfaNI	GCATC	6 cut(s)	120, 625, 777, 1671, 2127, 2161
SfcI	CTRYAG	2 cut(s)	316, 1089
SfoI	GGCGCC	1 cut(s)	1470
SfuI	TTCGAA	1 cut(s)	1968
SinI	GGWCC	4 cut(s)	49, 1018, 1589, 1784
SmiMI	CAYNNNNRTG	3 cut(s)	74, 1250, 1547
SmlI	CTYRAG	3 cut(s)	1445, 1901, 2313
SmoI	CTYRAG	3 cut(s)	1445, 1901, 2313
SpeI	ACTAGT	1 cut(s)	1627
SsiI	CCGC	7 cut(s)	342, 1195, 1660, 1762, 1777, 2063, 2239
SspDI	GGCGCC	1 cut(s)	1468
SspMI	CTAG	5 cut(s)	872, 1628, 1647, 1944, 2214
StyD4I	CCNGG	2 cut(s)	856, 1615
StyI	CCWWGG	1 cut(s)	157
TaaI	ACNGT	9 cut(s)	119, 943, 977, 1022, 1523, 1528, 1747, 2165, 2294
TaiI	ACGT	2 cut(s)	411, 2001
TaqI	TCGA	4 cut(s)	373, 832, 853, 1968
TatI	WGTACW	3 cut(s)	733, 1438, 1624
TfiI	GAWTC	4 cut(s)	474, 1228, 1970, 2222
Tru1I	TTAA	8 cut(s)	752, 780, 803, 840, 1134, 1221, 1266, 1446
Tru9I	TTAA	8 cut(s)	752, 780, 803, 840, 1134, 1221, 1266, 1446
TscAI	CASTG	2 cut(s)	825, 2299
TseFI	GTSAC	3 cut(s)	1252, 1324, 2103
TseI	GCWGC	7 cut(s)	5, 467, 986, 1082, 1085, 1155, 1292
Tsp45I	GTSAC	3 cut(s)	1252, 1324, 2103
TspGWI	ACGGA	3 cut(s)	896, 1796, 2029
TspRI	CASTG	2 cut(s)	825, 2299
Tth111I	GACNNNGTC	2 cut(s)	1587, 2101
Vha464I	CTTAAG	1 cut(s)	1445
VpaK11BI	GGWCC	4 cut(s)	49, 1018, 1589, 1784
XapI	RAATTY	3 cut(s)	500, 1003, 2150
XceI	RCATGY	3 cut(s)	380, 517, 1804
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1221
XmiI	GTMKAC	4 cut(s)	373, 853, 1948, 2005
XspI	CTAG	5 cut(s)	872, 1628, 1647, 1944, 2214
ZrmI	AGTACT	2 cut(s)	735, 1626
Zsp2I	ATGCAT	1 cut(s)	1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.