Rh5CG277600
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0005645
Physical Location & Seq
Forward (+)
30203542 .. 30217764
14223 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG277600.1

Sequence Viewer

Length: 3411 bp
ATGATGGTATCGGCGTCGCCGTCGATGGTGGCCAGGAGCTCGTTGGAGGAAATGCTGGATTCGCTGCGGCGGAGAGACGAGGCTGAGAAGCCCAAGGAATTGCCGCCGGCATTGCCGTCCCGGCCCACTTCCAAGGCTCGGCTGCCGTCGGCGCGCCGCTCCTTGCCCAACAACTTCAATGCCGAGACCTTAATCCGGTCGCCGGAGTGGGCCCCCAGTGTGAACAAGAGGAAAGAGAGGGATTCCGGGGTCAAGAGATGTAATAATTTTGGTGTCAAGAAGACGGAGAAGGACGCGGTGGAGTCGCCGTACGTTGCGTCGGAGGAGGAGCAGCTTCAGAGCCGGCAAAAGGTGGCGAAGTCCGATTGGGGTGATAACGTTGCTTATTTCATCATGAAGAAACTTAAGGTTTGGTGTCGGGGTCCTAGTGGAGTATGGGAGTCAGGAACAATACAATCAACGTCCGGGGATGTGGCATTTGTGTCACTTTCAAGTGGAAATGTAATCAAAGTGCCCAGGGATGAGCTGCTACCAGCAAACCCAGATGTTCTGGAAGGGGTGGATGATCTTGCACAGCTTAGCTATTTAAATGACCCTTCTGTTCTCTGCAATCTTCAGTCTAGATATTCGCAGGACATGATTTATAGCAAAGCAGGGCCAGTTTTGATTGCAATGAATCCTTTCAAAGATGTCCAAATTTGTGGAGATGATTTTGTCACAGCGTATAGGAAGAAACTTGTGGACAAACCTCATGTTTATGCAATAGCAGACGCTGCTTATAATGAGATGATGAGAGATGATGTAAATCAGTCCATAATCATAAGTGGGGAAAGTGGAGCTGGGAAAACGGAGACAGCAAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGGAGTTGTGGCGTGGAACATGCAATCCTTCAGACCAACTGTATACTGGAGGCATTTGGAAATGCAAAATCATCCAGAAATGATAACGCTAGCCGATTTGGGAAGTTGCTTGAAATTCATTTTAGCTCAGTGGGAAAAATATGTGGTGCTGAAATTCAAACCTTGTTTCTAGAAAAGTCAAGAGTGGCTCGATTGGAAAATGGTGAGAGGTCGTACCATATCTTTTATCAACTTTGTGCTGGTGCTCCATCAATGCTTAAAGAGAGGCTGAATCTGAAAATGGCTAGTGATTACAAGTATCTTAGTCAAAGTGGTTGCTTGGCAATTGATGGTGTAGATGATGCTCAGAAGTTTCACATGCTCATGGAAGCGTTTGCTATTCTTCAAATTTCTGAAGAAGATCAACTACAGGTGTTTTCTGTGTTGGCCGCTGTGTTATGGCTCGGAAACATATCATTTCAAGTAACGGATGATGAAAATCGTGTGGAAGTGTTGGCTGACGAAGCTATAACCACTGCTTCCAGGCTGATGGGATGTAGGGCCCAGGAGTTGATGCTAGCTTTATCCACCCATGACAATGCTGTTGAGGATAGTATTGATAAGAGATTGACGTTGCAGCAGGCCACTGATGCAAGGGATGCATTAGCAAAATTTATCTATGTGAGCTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCTCTTCAAGTGGGAAGATGCTGTACTGCGAGATCCATCAGTATACTTGATATATATGGGTTTGAGTCACTACAGAAGAACAGCTTTGAACAGATGTGTACTAATTATGCAAATGAGAGGCTGCAACAACATTTCAATCGCCATTTATTAAAGCTTGAACAGGAGGAATGTGAATTGGATGGGGTTGATTGGACTAAAGTAGATTTTGAAGACAACCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTTTCGGGCTACTATCCTTGTTGGAAGAGGAATCAAACTGCCCAAAGGCAACTGATTTGACCATTGCTGATAAGTTTAAGCAGCACTTGAATGGGAATTCTTGCTTTAAAGCAGAGAGAGGCAGATCTTTCAGTATTCGTCATCACGCTGGAGAGGTTCTATATGACACAAGTGGCTTCTTGGAAAAGAACAGAGATTCTTTGTCCTCTGTTACCATCCAGCTCTTGTCATCATGCAGCAGTCAGCTTCTGCGATTGTTTACCTCCAAAGTGCGTAAGCAAGTCCAGAAACCAGCAGCTACGTCTTGCCAGATGAATGCATTGGACTCTCCAAAACCAAGTGTTGGTATTAAGTTCAAGGCCCAATTATTTAAACTAATGCACCAGTTGGAGAGTAGCACACCTCACTTTGTTCGCTGCATAAAGCCAAATGGTAAGCAGCTTCCCGGTGTGTATGAAGCAGAACTTGTTTTACAACAGCTCAGGTGTTCTGGAGTTTCAGAGGTTGTTAGGATATCACGATCTGGATATCCCACTAGAATGACACATCAAGAATTTGCAGGAAGGTATGGTTTCCTGCTTCCAAAGCCCACTGTTGCTAAGGATCCATTAAGTCTATCTATTGCTGTTCTACAACAGTTCAGTTTCCTCCCTGAAATGTACCAAATAGGCTATACGAAAGTGTATCTTCGAACGGGGCAGATTGCTGCATTGGAGGATAAGAGAAATAAAGTTCTCCGAGGAATAATTGGTGTTCAAAAGTATTTCCGTGGTTACTGGGCTCGCCGTCATTTTCATCAAATTAAGGAAGGAACCACAAAATTACAATCAAATGCAGATGTTCCTGGTGGAAATGCTGGAAGGAAAGCTGATGCTCTAAAAACTAGACGGAAATCCAGCAGGAAGAGTTCTGAAGTGAAGGACATGCCTTCAGAATTAGAACAACTACGAAGGCGAGTGCTTCAGGCTGAGGCAACTCTGGAGCGAAAGGAAGAGGAAAATGCTGAGTTGCAGGAGCAGCTACAGCAGTTTGAGACGAGATGGTCAGATTACGAGGCAAAGATGAAATCAATGCAGGATGTCTGGCAAAAGCAGATGGCGTCTTTGCAAGTGAGTCTTTCTGCAGCCAGAAAGAGTCTTACTTCTGACAATACAGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGCAGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGATTCGGAAGATGCCCTCTCAATGGGATCTCGGACTCCTGGTGCAAGCACACCTATCAATGGGGTAGCGCGTGAGACAAATGGCACTTTGAGTGCTGTCGGAAATTTGGTGAAGGAATTTGATCAACAGAGACAAACTTTTGATGATGAAGTGAAAGCTCTGATTGAGGTAAAACCTGGGCATCCTGATGAAGAACTAAGGAAACTTAAACACCGGTTCGAATCATGGAAGAAAGAGTACAAGGCAAGATTACGAGAGACAAAGACAAAGCTCCATAAACATGGGCATTCAGAAGAGGAAAAGAGGCGAAAGAAATGGTGGGTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

1136

Amino Acids

127.89

Weight (kDa)

8.53

Isoelectric Point (pI)

50.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_VIII-1_N PF25369 135 - 179 1.3e-17 Myosin-1-like, N-terminal SH3 domain
Myosin_head PF00063 187 - 844 6.3e-224 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
AasI GACNNNNNNGTC 1 cut(s) 2881
AccB7I CCANNNNNTGG 1 cut(s) 2183
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 2 cut(s) 937, 1636
AccII CGCG 3 cut(s) 154, 296, 3151
AciI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1323
AclI AACGTT 1 cut(s) 378
AclWI GGATC 5 cut(s) 1620, 1830, 2438, 2451, 3115
AcoI YGGCCR 2 cut(s) 30, 1320
AcsI RAATTY 9 cut(s) 696, 1008, 1047, 1281, 1544, 1936, 2393, 3184, 3197
AcuI CTGAAG 7 cut(s) 320, 599, 908, 1308, 2754, 2772, 2786
AcyI GRCGYC 2 cut(s) 14, 2939
AfaI GTAC 6 cut(s) 311, 1109, 1618, 1693, 2501, 3320
AfiI CCNNNNNNNGG 7 cut(s) 138, 195, 202, 349, 2183, 3103, 3140
AflII CTTAAG 1 cut(s) 404
AgeI ACCGGT 1 cut(s) 3294
AjnI CCWGG 9 cut(s) 32, 515, 1415, 1437, 2683, 3004, 3049, 3118, 3256
AloI GAACNNNNNNTCC 2 cut(s) 903, 935
Alw21I GWGCWC 2 cut(s) 41, 1141
Alw26I GTCTC 8 cut(s) 69, 179, 845, 1599, 2867, 3149, 3205, 3332
AlwI GGATC 5 cut(s) 1620, 1830, 2438, 2451, 3115
AlwNI CAGNNNCTG 2 cut(s) 773, 2089
AoxI GGCC 8 cut(s) 30, 122, 210, 656, 1320, 1434, 1515, 2199
ApaI GGGCCC 2 cut(s) 214, 1438
ApoI RAATTY 9 cut(s) 696, 1008, 1047, 1281, 1544, 1936, 2393, 3184, 3197
AscI GGCGCGCC 1 cut(s) 152
AsiGI ACCGGT 1 cut(s) 3294
Asp700I GAANNNNTTC 2 cut(s) 680, 1841
AspLEI GCGC 3 cut(s) 154, 156, 3151
AspS9I GGNCC 8 cut(s) 123, 210, 211, 422, 656, 1434, 1435, 2200
AsuC2I CCSGG 4 cut(s) 121, 247, 466, 2286
AsuHPI GGTGA 5 cut(s) 383, 1109, 3018, 3063, 3202
AsuII TTCGAA 2 cut(s) 2530, 3300
AsuNHI GCTAGC 2 cut(s) 983, 1450
AvaII GGWCC 1 cut(s) 422
BaeGI GKGCMC 3 cut(s) 214, 516, 1438
BalI TGGCCA 1 cut(s) 32
BamHI GGATCC 1 cut(s) 2443
BanII GRGCYC 4 cut(s) 41, 214, 1438, 2623
BarI GAAGNNNNNNTAC 6 cut(s) 1284, 1316, 1600, 1632, 3302, 3334
BbsI GAAGAC 2 cut(s) 287, 1809
Bbv12I GWGCWC 2 cut(s) 41, 1141
BbvCI CCTCAGC 1 cut(s) 2808
BccI CCATC 9 cut(s) 19, 1150, 1217, 1417, 1637, 1766, 2063, 2874, 2929
BceAI ACGGC 5 cut(s) 4, 100, 130, 292, 2610
BciT130I CCWGG 9 cut(s) 34, 517, 1417, 1439, 2685, 3006, 3051, 3120, 3258
BclI TGATCA 1 cut(s) 3202
BcnI CCSGG 4 cut(s) 121, 247, 466, 2286
BcoDI GTCTC 8 cut(s) 69, 179, 845, 1599, 2867, 3149, 3205, 3332
BfaI CTAG 9 cut(s) 426, 621, 984, 1064, 1179, 1451, 2376, 2724, 3409
BfmI CTRYAG 4 cut(s) 1301, 1664, 2861, 2961
BfrI CTTAAG 1 cut(s) 404
BglI GCCNNNNNGGC 1 cut(s) 121
BglII AGATCT 1 cut(s) 1964
BlpI GCTNAGC 1 cut(s) 578
Bme18I GGWCC 1 cut(s) 422
BmgT120I GGNCC 8 cut(s) 123, 210, 211, 422, 656, 1434, 1435, 2200
BmiI GGNNCC 6 cut(s) 212, 213, 423, 1436, 2445, 2653
BmrI ACTGGG 2 cut(s) 210, 2626
BmsI GCATC 8 cut(s) 1225, 1437, 1513, 1522, 1601, 2701, 3082, 3271
BmtI GCTAGC 2 cut(s) 987, 1454
BmuI ACTGGG 2 cut(s) 210, 2626
BpiI GAAGAC 2 cut(s) 287, 1809
BpmI CTGGAG 4 cut(s) 962, 2010, 2352, 2840
Bpu10I CCTNAGC 3 cut(s) 2321, 2439, 2808
Bpu1102I GCTNAGC 1 cut(s) 578
Bpu14I TTCGAA 2 cut(s) 2530, 3300
BpuMI CCSGG 4 cut(s) 121, 247, 466, 2286
BsaBI GATNNNNATC 2 cut(s) 804, 1371
BsaHI GRCGYC 2 cut(s) 14, 2939
BsaI GGTCTC 1 cut(s) 179
BsaWI WCCGGW 2 cut(s) 195, 3294
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 195, 202, 349, 2183, 3103, 3140
Bse118I RCCGGY 3 cut(s) 106, 342, 3294
Bse1I ACTGG 6 cut(s) 216, 659, 945, 1574, 2224, 2621
Bse3DI GCAATG 4 cut(s) 110, 678, 873, 1902
Bse8I GATNNNNATC 2 cut(s) 804, 1371
BseBI CCWGG 9 cut(s) 34, 517, 1417, 1439, 2685, 3006, 3051, 3120, 3258
BseJI GATNNNNATC 2 cut(s) 804, 1371
BseLI CCNNNNNNNGG 7 cut(s) 138, 195, 202, 349, 2183, 3103, 3140
BseMI GCAATG 4 cut(s) 110, 678, 873, 1902
BseMII CTCAG 6 cut(s) 75, 1035, 1253, 2335, 2799, 2835
BseNI ACTGG 6 cut(s) 216, 659, 945, 1574, 2224, 2621
BsePI GCGCGC 1 cut(s) 152
BseRI GAGGAG 2 cut(s) 338, 341
BseSI GKGCMC 3 cut(s) 214, 516, 1438
BseYI CCCAGC 1 cut(s) 839
Bsh1236I CGCG 3 cut(s) 154, 296, 3151
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 8 cut(s) 32, 124, 212, 658, 1322, 1436, 1517, 2201
BshTI ACCGGT 1 cut(s) 3294
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 2 cut(s) 41, 1141
BsiSI CCGG 9 cut(s) 107, 121, 196, 203, 246, 343, 465, 2286, 3295
BsiWI CGTACG 1 cut(s) 309
BslFI GGGAC 1 cut(s) 103
BslI CCNNNNNNNGG 7 cut(s) 138, 195, 202, 349, 2183, 3103, 3140
BsmAI GTCTC 8 cut(s) 69, 179, 845, 1599, 2867, 3149, 3205, 3332
BsmBI CGTCTC 2 cut(s) 69, 2867
BsmFI GGGAC 1 cut(s) 103
BsmI GAATGC 2 cut(s) 2161, 3367
BsnI GGCC 8 cut(s) 32, 124, 212, 658, 1322, 1436, 1517, 2201
Bso31I GGTCTC 1 cut(s) 179
Bsp119I TTCGAA 2 cut(s) 2530, 3300
Bsp120I GGGCCC 2 cut(s) 210, 1434
Bsp1286I GDGCHC 6 cut(s) 41, 214, 516, 1141, 1438, 2623
Bsp143I GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
Bsp1720I GCTNAGC 1 cut(s) 578
BspACI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1323
BspANI GGCC 8 cut(s) 32, 124, 212, 658, 1322, 1436, 1517, 2201
BspCNI CTCAG 6 cut(s) 76, 1034, 1252, 2334, 2800, 2836
BspFNI CGCG 3 cut(s) 154, 296, 3151
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 6 cut(s) 212, 213, 423, 1436, 2445, 2653
BspMAI CTGCAG 1 cut(s) 2965
BspOI GCTAGC 2 cut(s) 987, 1454
BspPI GGATC 5 cut(s) 1620, 1830, 2438, 2451, 3115
BspT104I TTCGAA 2 cut(s) 2530, 3300
BspTI CTTAAG 1 cut(s) 404
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 110, 678, 873, 1902
BsrFI RCCGGY 3 cut(s) 106, 342, 3294
BsrI ACTGG 6 cut(s) 216, 659, 945, 1574, 2224, 2621
BssAI RCCGGY 3 cut(s) 106, 342, 3294
BssHII GCGCGC 1 cut(s) 152
BssMI GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
BssNAI GTATAC 2 cut(s) 938, 1637
BssNI GRCGYC 2 cut(s) 14, 2939
BssT1I CCWWGG 2 cut(s) 93, 132
Bst1107I GTATAC 2 cut(s) 938, 1637
Bst2UI CCWGG 9 cut(s) 34, 517, 1417, 1439, 2685, 3006, 3051, 3120, 3258
Bst4CI ACNGT 3 cut(s) 935, 2434, 2478
Bst6I CTCTTC 7 cut(s) 1602, 1860, 2738, 2826, 3004, 3049, 3369
BstACI GRCGYC 2 cut(s) 14, 2939
BstAFI CTTAAG 1 cut(s) 404
BstAPI GCANNNNNTGC 3 cut(s) 773, 863, 1532
BstBI TTCGAA 2 cut(s) 2530, 3300
BstC8I GCNNGC 8 cut(s) 108, 154, 344, 985, 1452, 1515, 2623, 3127
BstDSI CCRYGG 1 cut(s) 2608
BstFNI CGCG 3 cut(s) 154, 296, 3151
BstHHI GCGC 3 cut(s) 154, 156, 3151
BstKTI GATC 9 cut(s) 568, 1297, 1628, 1825, 1967, 2363, 2446, 3110, 3205
BstMAI GTCTC 8 cut(s) 69, 179, 845, 1599, 2867, 3149, 3205, 3332
BstMBI GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
BstMCI CGRYCG 1 cut(s) 200
BstNI CCWGG 9 cut(s) 34, 517, 1417, 1439, 2685, 3006, 3051, 3120, 3258
BstNSI RCATGY 3 cut(s) 917, 1255, 2767
BstSFI CTRYAG 4 cut(s) 1301, 1664, 2861, 2961
BstSLI GKGCMC 3 cut(s) 214, 516, 1438
BstUI CGCG 3 cut(s) 154, 296, 3151
BstV2I GAAGAC 2 cut(s) 287, 1809
BstX2I RGATCY 5 cut(s) 1625, 1822, 1964, 2443, 3107
BstXI CCANNNNNNTGG 3 cut(s) 701, 1423, 3362
BstYI RGATCY 5 cut(s) 1625, 1822, 1964, 2443, 3107
BstZ17I GTATAC 2 cut(s) 938, 1637
BsuRI GGCC 8 cut(s) 32, 124, 212, 658, 1322, 1436, 1517, 2201
BtgI CCRYGG 1 cut(s) 2608
BtsI GCAGTG 1 cut(s) 1407
BtsIMutI CAGTG 5 cut(s) 223, 1029, 1407, 1518, 2430
Cac8I GCNNGC 8 cut(s) 108, 154, 344, 985, 1452, 1515, 2623, 3127
CaiI CAGNNNCTG 2 cut(s) 773, 2089
CciI TCATGA 1 cut(s) 393
CfoI GCGC 3 cut(s) 154, 156, 3151
Cfr10I RCCGGY 3 cut(s) 106, 342, 3294
Cfr13I GGNCC 8 cut(s) 123, 210, 211, 422, 656, 1434, 1435, 2200
CseI GACGC 5 cut(s) 3, 302, 306, 779, 2928
Csp6I GTAC 6 cut(s) 310, 1108, 1617, 1692, 2500, 3319
CspAI ACCGGT 1 cut(s) 3294
CviQI GTAC 6 cut(s) 310, 1108, 1617, 1692, 2500, 3319
DpnI GATC 9 cut(s) 567, 1296, 1627, 1824, 1966, 2362, 2445, 3109, 3204
DpnII GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
DraI TTTAAA 3 cut(s) 588, 1948, 2212
DrdI GACNNNNNNGTC 1 cut(s) 2881
DseDI GACNNNNNNGTC 1 cut(s) 2881
EaeI YGGCCR 2 cut(s) 30, 1320
Eam1104I CTCTTC 7 cut(s) 1602, 1860, 2738, 2826, 3004, 3049, 3369
EarI CTCTTC 7 cut(s) 1602, 1860, 2738, 2826, 3004, 3049, 3369
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 39
Eco130I CCWWGG 2 cut(s) 93, 132
Eco24I GRGCYC 4 cut(s) 41, 214, 1438, 2623
Eco31I GGTCTC 1 cut(s) 179
Eco32I GATATC 2 cut(s) 2355, 2369
Eco47I GGWCC 1 cut(s) 422
Eco53kI GAGCTC 1 cut(s) 39
Eco57I CTGAAG 7 cut(s) 320, 599, 908, 1308, 2754, 2772, 2786
EcoICRI GAGCTC 1 cut(s) 39
EcoO109I RGGNCCY 3 cut(s) 211, 422, 1434
EcoRI GAATTC 1 cut(s) 1936
EcoRII CCWGG 9 cut(s) 32, 515, 1415, 1437, 2683, 3004, 3049, 3118, 3256
EcoRV GATATC 2 cut(s) 2355, 2369
EcoT14I CCWWGG 2 cut(s) 93, 132
EcoT22I ATGCAT 2 cut(s) 1537, 2161
EcoT38I GRGCYC 4 cut(s) 41, 214, 1438, 2623
ErhI CCWWGG 2 cut(s) 93, 132
Esp3I CGTCTC 2 cut(s) 69, 2867
FaqI GGGAC 1 cut(s) 103
FbaI TGATCA 1 cut(s) 3202
FblI GTMKAC 2 cut(s) 937, 1636
FriOI GRGCYC 4 cut(s) 41, 214, 1438, 2623
FspBI CTAG 9 cut(s) 426, 621, 984, 1064, 1179, 1451, 2376, 2724, 3409
GlaI GCGC 3 cut(s) 153, 155, 3150
GsaI CCCAGC 1 cut(s) 843
GsuI CTGGAG 4 cut(s) 962, 2010, 2352, 2840
HaeIII GGCC 8 cut(s) 32, 124, 212, 658, 1322, 1436, 1517, 2201
HapII CCGG 9 cut(s) 107, 121, 196, 203, 246, 343, 465, 2286, 3295
HgaI GACGC 5 cut(s) 3, 302, 306, 779, 2928
HhaI GCGC 3 cut(s) 154, 156, 3151
Hin1I GRCGYC 2 cut(s) 14, 2939
Hin6I GCGC 3 cut(s) 152, 154, 3149
HinP1I GCGC 3 cut(s) 152, 154, 3149
HincII GTYRAC 2 cut(s) 3002, 3047
HindII GTYRAC 2 cut(s) 3002, 3047
HindIII AAGCTT 1 cut(s) 1745
HpaII CCGG 9 cut(s) 107, 121, 196, 203, 246, 343, 465, 2286, 3295
HphI GGTGA 5 cut(s) 383, 1109, 3018, 3063, 3202
Hpy99I CGWCG 4 cut(s) 19, 25, 151, 322
HpyCH4III ACNGT 3 cut(s) 935, 2434, 2478
HpyCH4IV ACGT 5 cut(s) 312, 378, 461, 1505, 2141
HpySE526I ACGT 5 cut(s) 312, 378, 461, 1505, 2141
Hsp92I GRCGYC 2 cut(s) 14, 2939
HspAI GCGC 3 cut(s) 152, 154, 3149
KroI GCCGGC 2 cut(s) 106, 342
KroNI GCCGGC 2 cut(s) 108, 344
Ksp22I TGATCA 1 cut(s) 3202
Kzo9I GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
LmnI GCTCC 8 cut(s) 36, 164, 328, 836, 1144, 2821, 2854, 3357
LweI GCATC 8 cut(s) 1225, 1437, 1513, 1522, 1601, 2701, 3082, 3271
MaeI CTAG 9 cut(s) 426, 621, 984, 1064, 1179, 1451, 2376, 2724, 3409
MaeII ACGT 5 cut(s) 312, 378, 461, 1505, 2141
MaeIII GTNAC 6 cut(s) 483, 715, 1357, 1659, 2050, 2612
MalI GATC 9 cut(s) 567, 1296, 1627, 1824, 1966, 2362, 2445, 3109, 3204
MbiI CCGCTC 1 cut(s) 159
MboI GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
MfeI CAATTG 1 cut(s) 1218
MflI RGATCY 5 cut(s) 1625, 1822, 1964, 2443, 3107
MhlI GDGCHC 6 cut(s) 41, 214, 516, 1141, 1438, 2623
MlsI TGGCCA 1 cut(s) 32
MluNI TGGCCA 1 cut(s) 32
MlyI GAGTC 7 cut(s) 311, 449, 1667, 2159, 2962, 2983, 3109
MmeI TCCRAC 5 cut(s) 24, 300, 1842, 2208, 3160
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 2 cut(s) 1537, 2161
MroNI GCCGGC 2 cut(s) 106, 342
MroXI GAANNNNTTC 2 cut(s) 680, 1841
MscI TGGCCA 1 cut(s) 32
MslI CAYNNNNRTG 7 cut(s) 756, 1256, 1470, 1929, 2378, 3267, 3360
Msp20I TGGCCA 1 cut(s) 32
MspA1I CMGCKG 1 cut(s) 1325
MspCI CTTAAG 1 cut(s) 404
MspI CCGG 9 cut(s) 107, 121, 196, 203, 246, 343, 465, 2286, 3295
MunI CAATTG 1 cut(s) 1218
Mva1269I GAATGC 2 cut(s) 2161, 3367
MvaI CCWGG 9 cut(s) 34, 517, 1417, 1439, 2685, 3006, 3051, 3120, 3258
MvnI CGCG 3 cut(s) 154, 296, 3151
NaeI GCCGGC 2 cut(s) 108, 344
NciI CCSGG 4 cut(s) 121, 247, 466, 2286
NdeII GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
NgoMIV GCCGGC 2 cut(s) 106, 342
NheI GCTAGC 2 cut(s) 983, 1450
NlaIV GGNNCC 6 cut(s) 212, 213, 423, 1436, 2445, 2653
NmeAIII GCCGAG 2 cut(s) 118, 208
NmuCI GTSAC 3 cut(s) 483, 715, 1659
NsiI ATGCAT 2 cut(s) 1537, 2161
NspI RCATGY 3 cut(s) 917, 1255, 2767
NspV TTCGAA 2 cut(s) 2530, 3300
PagI TCATGA 1 cut(s) 393
PalAI GGCGCGCC 1 cut(s) 152
PasI CCCWGGG 1 cut(s) 516
PauI GCGCGC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PctI GAATGC 2 cut(s) 2161, 3367
PdiI GCCGGC 2 cut(s) 108, 344
PdmI GAANNNNTTC 2 cut(s) 680, 1841
PfeI GAWTC 8 cut(s) 59, 242, 676, 1165, 1871, 2036, 3083, 3302
Pfl23II CGTACG 1 cut(s) 309
PflMI CCANNNNNTGG 1 cut(s) 2183
PinAI ACCGGT 1 cut(s) 3294
PleI GAGTC 7 cut(s) 310, 448, 1666, 2159, 2961, 2982, 3109
PpsI GAGTC 7 cut(s) 310, 448, 1666, 2159, 2961, 2982, 3109
PpuMI RGGWCCY 1 cut(s) 422
PsiI TTATAA 1 cut(s) 780
Psp124BI GAGCTC 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 378
Psp5II RGGWCCY 1 cut(s) 422
Psp6I CCWGG 9 cut(s) 32, 515, 1415, 1437, 2683, 3004, 3049, 3118, 3256
PspFI CCCAGC 1 cut(s) 839
PspGI CCWGG 9 cut(s) 32, 515, 1415, 1437, 2683, 3004, 3049, 3118, 3256
PspLI CGTACG 1 cut(s) 309
PspN4I GGNNCC 6 cut(s) 212, 213, 423, 1436, 2445, 2653
PspOMI GGGCCC 2 cut(s) 210, 1434
PspPI GGNCC 8 cut(s) 123, 210, 211, 422, 656, 1434, 1435, 2200
PspPPI RGGWCCY 1 cut(s) 422
PsrI GAACNNNNNNTAC 2 cut(s) 2295, 2327
PstI CTGCAG 1 cut(s) 2965
PstNI CAGNNNCTG 2 cut(s) 773, 2089
PsuI RGATCY 5 cut(s) 1625, 1822, 1964, 2443, 3107
PteI GCGCGC 1 cut(s) 152
RsaI GTAC 6 cut(s) 311, 1109, 1618, 1693, 2501, 3320
RsaNI GTAC 6 cut(s) 310, 1108, 1617, 1692, 2500, 3319
RseI CAYNNNNRTG 7 cut(s) 756, 1256, 1470, 1929, 2378, 3267, 3360
SacI GAGCTC 1 cut(s) 41
Sau3AI GATC 9 cut(s) 565, 1294, 1625, 1822, 1964, 2360, 2443, 3107, 3202
Sau96I GGNCC 8 cut(s) 123, 210, 211, 422, 656, 1434, 1435, 2200
SchI GAGTC 7 cut(s) 311, 449, 1667, 2159, 2962, 2983, 3109
SduI GDGCHC 6 cut(s) 41, 214, 516, 1141, 1438, 2623
SfaNI GCATC 8 cut(s) 1225, 1437, 1513, 1522, 1601, 2701, 3082, 3271
SfcI CTRYAG 4 cut(s) 1301, 1664, 2861, 2961
SfuI TTCGAA 2 cut(s) 2530, 3300
SgsI GGCGCGCC 1 cut(s) 152
SinI GGWCC 1 cut(s) 422
SmiI ATTTAAAT 1 cut(s) 588
SmiMI CAYNNNNRTG 7 cut(s) 756, 1256, 1470, 1929, 2378, 3267, 3360
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
SsiI CCGC 6 cut(s) 67, 70, 104, 157, 296, 1323
SspMI CTAG 9 cut(s) 426, 621, 984, 1064, 1179, 1451, 2376, 2724, 3409
SstI GAGCTC 1 cut(s) 41
StyI CCWWGG 2 cut(s) 93, 132
SwaI ATTTAAAT 1 cut(s) 588
TaaI ACNGT 3 cut(s) 935, 2434, 2478
TaiI ACGT 5 cut(s) 315, 381, 464, 1508, 2144
TaqI TCGA 6 cut(s) 23, 1084, 2530, 3031, 3076, 3300
TatI WGTACW 3 cut(s) 1616, 1691, 3318
TauI GCSGC 4 cut(s) 70, 106, 159, 1325
TfiI GAWTC 8 cut(s) 59, 242, 676, 1165, 1871, 2036, 3083, 3302
TscAI CASTG 5 cut(s) 223, 1029, 1414, 1525, 2437
TseFI GTSAC 3 cut(s) 483, 715, 1659
Tsp45I GTSAC 3 cut(s) 483, 715, 1659
TspGWI ACGGA 5 cut(s) 299, 863, 1376, 2597, 2743
TspRI CASTG 5 cut(s) 223, 1029, 1414, 1525, 2437
Van91I CCANNNNNTGG 1 cut(s) 2183
Vha464I CTTAAG 1 cut(s) 404
VpaK11BI GGWCC 1 cut(s) 422
XapI RAATTY 9 cut(s) 696, 1008, 1047, 1281, 1544, 1936, 2393, 3184, 3197
XbaI TCTAGA 2 cut(s) 620, 1063
XceI RCATGY 3 cut(s) 917, 1255, 2767
XcmI CCANNNNNNNNNTGG 2 cut(s) 40, 937
XmiI GTMKAC 2 cut(s) 937, 1636
XmnI GAANNNNTTC 2 cut(s) 680, 1841
XspI CTAG 9 cut(s) 426, 621, 984, 1064, 1179, 1451, 2376, 2724, 3409
Zsp2I ATGCAT 2 cut(s) 1537, 2161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.